Table of Contents
The melon fly, Bactrocera cucurbitae, originally from the Indo-Malayan region, is an important Tephritid agricultural pest with a broad host of fruit and vegetables of tropical and sub-tropical regions. It was the first tephritid species introduced in Hawaii. Damage to fruits and vegetables occur by female oviposition, subsequent larvae feeding and rotting due to the introgression of bacteria and fungus in the flesh. Adult flies are between 6 to 8 mm in length, with distinctive wing pattern.
- Analysis Name
- Bactrocera cucurbitae genome assembly Bcur_v1
- Allpaths (49856)
- Bactrocera cucurbitae strain USDA-PBARC White Pupae T1, whole genome shotgun sequencing project
- Date performed
- Materials & Methods
- A short insert library was constructed from a single melon fly (USDA ID 2M2-2). A 3 kb mate-paired library was constructed from a single melon fly that is a full sibling of the first melon fly (USDA ID 2M1-4). An 8 kb mate-paired library was constructed from a pool of individuals from the T1 colony (T1 pool). Sequencing and DNA extractions were done separately for each library then the reads from the three libraries were pooled to generate the assembly.
- Contig N50
- Scaffold N50
- GC Content