Accession_ID Pathway_Count Pathway_IDs Pathway_Names ID=BGER004205-PA|Name=BGER004205-PA 1 KEGG: 00290+4.2.1.33 "Valine, leucine and isoleucine biosynthesis" ID=BGER011096-PA|Name=BGER011096-PA 2 Reactome: R-HSA-70921;KEGG: 00340+2.1.1.22 "Histidine catabolism";"Histidine metabolism" ID=BGER027132-PA|Name=BGER027132-PA 5 Reactome: R-HSA-5218921;Reactome: R-HSA-186763;Reactome: R-HSA-3928662;Reactome: R-HSA-8849471;Reactome: R-HSA-5658442 "VEGFR2 mediated cell proliferation";"Downstream signal transduction";"EPHB-mediated forward signaling";"PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases";"Regulation of RAS by GAPs" ID=BGER020259-PA|Name=BGER020259-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER002732-PA|Name=BGER002732-PA 6 KEGG: 00630+1.11.1.6;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017 "Glyoxylate and dicarboxylate metabolism";"Tryptophan metabolism";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes" ID=BGER028753-PA|Name=BGER028753-PA 6 MetaCyc: PWY-622;MetaCyc: PWY-5067;MetaCyc: PWY-7900;Reactome: R-HSA-189085;KEGG: 00500+3.2.1.1;KEGG: 00500+2.4.1.18 "Starch biosynthesis";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Digestion of dietary carbohydrate";"Starch and sucrose metabolism";"Starch and sucrose metabolism" ID=BGER012781-PA|Name=BGER012781-PA 2 Reactome: R-HSA-877300;Reactome: R-HSA-2132295 "Interferon gamma signaling";"MHC class II antigen presentation" ID=BGER013472-PA|Name=BGER013472-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER002336-PA|Name=BGER002336-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-917977 "Insulin receptor recycling";"ROS and RNS production in phagocytes";"Ion channel transport";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling" ID=BGER009620-PA|Name=BGER009620-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER021197-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER005786-PA|Name=BGER005786-PA 2 Reactome: R-HSA-5250971;Reactome: R-HSA-5682910 "Toxicity of botulinum toxin type C (BoNT/C)";"LGI-ADAM interactions" ID=BGER024928-PA|Name=BGER024928-PA 3 Reactome: R-HSA-6784531;MetaCyc: PWY-7803;MetaCyc: PWY-6689 "tRNA processing in the nucleus";"Trna splicing II";"Trna splicing I" ID=BGER025033-PA|Name=BGER025033-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-606279 "Fanconi Anemia Pathway";"Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER002672-PA|Name=BGER002672-PA 3 KEGG: 04660+2.7.10.2;Reactome: R-HSA-8854691;Reactome: R-HSA-6785807 "T cell receptor signaling pathway";"Interleukin-20 family signaling";"Interleukin-4 and Interleukin-13 signaling" ID=BGER008143-PA|Name=BGER008143-PA 2 Reactome: R-HSA-4086398;Reactome: R-HSA-418457 "Ca2+ pathway";"cGMP effects" ID=BGER007454-PA|Name=BGER007454-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER026054-PA|Name=BGER026054-PA 2 Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" ID=BGER009699-PA|Name=BGER009699-PA 18 KEGG: 00960+2.6.1.1;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00400+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00401+2.6.1.1;KEGG: 00360+2.6.1.1;KEGG: 00220+2.6.1.1;KEGG: 00950+2.6.1.1;MetaCyc: PWY-5913;MetaCyc: PWY-7383;KEGG: 00330+2.6.1.1;MetaCyc: PWY-7117;MetaCyc: PWY-6642;KEGG: 00710+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00270+2.6.1.1;KEGG: 00350+2.6.1.1 "Tropane, piperidine and pyridine alkaloid biosynthesis";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Phenylalanine, tyrosine and tryptophan biosynthesis";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Novobiocin biosynthesis";"Phenylalanine metabolism";"Arginine biosynthesis";"Isoquinoline alkaloid biosynthesis";"Partial TCA cycle (obligate autotrophs)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Arginine and proline metabolism";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"(R)-cysteate degradation";"Carbon fixation in photosynthetic organisms";"Coenzyme M biosynthesis II";"Cysteine and methionine metabolism";"Tyrosine metabolism" ID=BGER007202-PA|Name=BGER007202-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-6733;MetaCyc: PWY-7782;Reactome: R-HSA-9640463;MetaCyc: PWY-5884 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I" ID=BGER010910-PA|Name=BGER010910-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER018501-PA|Name=BGER018501-PA 7 MetaCyc: PWY-6363;MetaCyc: PWY-4702;KEGG: 00521+3.1.3.25;Reactome: R-HSA-1855183;KEGG: 00562+3.1.3.25;KEGG: 04070+3.1.3.25;MetaCyc: PWY-2301 "D-myo-inositol (1,4,5)-trisphosphate degradation";"Phytate degradation I";"Streptomycin biosynthesis";"Synthesis of IP2, IP, and Ins in the cytosol";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Myo-inositol biosynthesis" ID=BGER000683-PA|Name=BGER000683-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER001483-PA|Name=BGER001483-PA 8 Reactome: R-HSA-5340588;Reactome: R-HSA-5099900;Reactome: R-HSA-8856825;Reactome: R-HSA-8856828;Reactome: R-HSA-373080;Reactome: R-HSA-4608870;Reactome: R-HSA-4086398;Reactome: R-HSA-4641263 "RNF mutants show enhanced WNT signaling and proliferation";"WNT5A-dependent internalization of FZD4";"Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis";"Class B/2 (Secretin family receptors)";"Asymmetric localization of PCP proteins";"Ca2+ pathway";"Regulation of FZD by ubiquitination" ID=BGER015948-PA|Name=BGER015948-PA 4 Reactome: R-HSA-6807505;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "RNA polymerase II transcribes snRNA genes";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER012549-PA|Name=BGER012549-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER028636-PA|Name=BGER028636-PA 4 Reactome: R-HSA-196741;KEGG: 00860+2.5.1.17;Reactome: R-HSA-3359471;Reactome: R-HSA-3295583 "Cobalamin (Cbl, vitamin B12) transport and metabolism";"Porphyrin and chlorophyll metabolism";"Defective MMAB causes methylmalonic aciduria type cblB";"TRP channels" ID=BGER007516-PA|Name=BGER007516-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER026735-PA|Name=BGER026735-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER022449-PA|Name=BGER022449-PA 2 Reactome: R-HSA-390471;Reactome: R-HSA-1660662 "Association of TriC/CCT with target proteins during biosynthesis";"Glycosphingolipid metabolism" ID=BGER017207-PA|Name=BGER017207-PA 13 Reactome: R-HSA-8856825;Reactome: R-HSA-5099900;Reactome: R-HSA-8964038;Reactome: R-HSA-167590;Reactome: R-HSA-177504;Reactome: R-HSA-437239;Reactome: R-HSA-8856828;Reactome: R-HSA-416993;Reactome: R-HSA-5140745;Reactome: R-HSA-3928665;Reactome: R-HSA-8866427;Reactome: R-HSA-2132295;Reactome: R-HSA-182218 "Cargo recognition for clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD4";"LDL clearance";"Nef Mediated CD4 Down-regulation";"Retrograde neurotrophin signalling";"Recycling pathway of L1";"Clathrin-mediated endocytosis";"Trafficking of GluR2-containing AMPA receptors";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"EPH-ephrin mediated repulsion of cells";"VLDLR internalisation and degradation";"MHC class II antigen presentation";"Nef Mediated CD8 Down-regulation" ID=BGER019711-PA|Name=BGER019711-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER002256-PA|Name=BGER002256-PA 2 Reactome: R-HSA-446193;Reactome: R-HSA-4570571 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Defective RFT1 causes RFT1-CDG (CDG-1n)" ID=BGER021398-PA|Name=BGER021398-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER000978-PA|Name=BGER000978-PA 5 KEGG: 00603+3.2.1.22;KEGG: 00561+3.2.1.22;KEGG: 00600+3.2.1.22;KEGG: 00052+3.2.1.22;MetaCyc: PWY-6527 "Glycosphingolipid biosynthesis - globo and isoglobo series";"Glycerolipid metabolism";"Sphingolipid metabolism";"Galactose metabolism";"Stachyose degradation" ID=BGER013326-PA|Name=BGER013326-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER024674-PA|Name=BGER024674-PA 2 Reactome: R-HSA-189451;KEGG: 00860+4.99.1.1 "Heme biosynthesis";"Porphyrin and chlorophyll metabolism" ID=BGER014567-PA|Name=BGER014567-PA 1 Reactome: R-HSA-426048 "Arachidonate production from DAG" ID=BGER018648-PA|Name=BGER018648-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823 "Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation" ID=BGER008698-PA|Name=BGER008698-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER021552-PA|Name=BGER021552-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER028856-PA|Name=BGER028856-PA 4 Reactome: R-HSA-75955;Reactome: R-HSA-674695;Reactome: R-HSA-112382;Reactome: R-HSA-8866654 "RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex";"E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER008078-PA|Name=BGER008078-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Selenocysteine synthesis" ID=BGER009462-PA|Name=BGER009462-PA 2 Reactome: R-HSA-5083628;Reactome: R-HSA-5173105 "Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3";"O-linked glycosylation" ID=BGER019238-PA|Name=BGER019238-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER001424-PA|Name=BGER001424-PA 1 Reactome: R-HSA-8849932 "Synaptic adhesion-like molecules" ID=BGER005841-PA|Name=BGER005841-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER005825-PA|Name=BGER005825-PA 1 Reactome: R-HSA-4615885 "SUMOylation of DNA replication proteins" ID=BGER016081-PA|Name=BGER016081-PA 24 Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-9646399;Reactome: R-HSA-5626467;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-380320;Reactome: R-HSA-8852276;Reactome: R-HSA-190861;Reactome: R-HSA-5617833;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-190840;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736 "Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"Aggrephagy";"RHO GTPases activate IQGAPs";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Gap junction assembly";"Cilium Assembly";"HCMV Early Events";"COPI-mediated anterograde transport";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors" ID=BGER015936-PA|Name=BGER015936-PA 2 KEGG: 00280+1.3.8.4;Reactome: R-HSA-70895 "Valine, leucine and isoleucine degradation";"Branched-chain amino acid catabolism" ID=BGER028023-PA|Name=BGER028023-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" ID=BGER001958-PA|Name=BGER001958-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER010585-PA|Name=BGER010585-PA 1 Reactome: R-HSA-418886 "Netrin mediated repulsion signals" ID=BGER022462-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER026815-PA|Name=BGER026815-PA 1 Reactome: R-HSA-5658442 "Regulation of RAS by GAPs" ID=BGER016261-PA|Name=BGER016261-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER014975-PA|Name=BGER014975-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER003801-PA|Name=BGER003801-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER004937-PA|Name=BGER004937-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER016417-PA|Name=BGER016417-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER000645-PA|Name=BGER000645-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" ID=BGER010521-PA|Name=BGER010521-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-4085001;Reactome: R-HSA-4341670;Reactome: R-HSA-2132295;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Sialic acid metabolism";"Defective NEU1 causes sialidosis";"MHC class II antigen presentation";"Glycosphingolipid metabolism" ID=BGER003488-PA|Name=BGER003488-PA 2 Reactome: R-HSA-6783984;KEGG: 00260+1.4.4.2 "Glycine degradation";"Glycine, serine and threonine metabolism" ID=BGER006107-PA|Name=BGER006107-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER016289-PA|Name=BGER016289-PA 3 Reactome: R-HSA-2408508;Reactome: R-HSA-1614603;Reactome: R-HSA-1614558 "Metabolism of ingested SeMet, Sec, MeSec into H2Se";"Cysteine formation from homocysteine";"Degradation of cysteine and homocysteine" ID=BGER018368-PA|Name=BGER018368-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER029171-PA|Name=BGER029171-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER003486-PA|Name=BGER003486-PA 2 KEGG: 00260+1.4.4.2;Reactome: R-HSA-6783984 "Glycine, serine and threonine metabolism";"Glycine degradation" ID=BGER022229-PA|Name=BGER022229-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER012824-PA|Name=BGER012824-PA 4 Reactome: R-HSA-6782861;MetaCyc: PWY-7285;Reactome: R-HSA-156588;MetaCyc: PWY-7286 "Synthesis of wybutosine at G37 of tRNA(Phe)";"Methylwyosine biosynthesis";"Glucuronidation";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis" ID=BGER023823-PA|Name=BGER023823-PA 17 Reactome: R-HSA-5696400;Reactome: R-HSA-110314;Reactome: R-HSA-5358606;Reactome: R-HSA-6782210;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-69091;Reactome: R-HSA-69166;Reactome: R-HSA-174411;Reactome: R-HSA-174437;Reactome: R-HSA-69183;Reactome: R-HSA-5696397;Reactome: R-HSA-5358565;Reactome: R-HSA-6782135;Reactome: R-HSA-174414;Reactome: R-HSA-5651801;Reactome: R-HSA-174417 "Dual Incision in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Polymerase switching";"Removal of the Flap Intermediate";"Polymerase switching on the C-strand of the telomere";"Removal of the Flap Intermediate from the C-strand";"Processive synthesis on the lagging strand";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Dual incision in TC-NER";"Processive synthesis on the C-strand of the telomere";"PCNA-Dependent Long Patch Base Excision Repair";"Telomere C-strand (Lagging Strand) Synthesis" ID=BGER029942-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER017050-PA|Name=BGER017050-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER020351-PA|Name=BGER020351-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER008008-PA|Name=BGER008008-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER029554-PA|Name=BGER029554-PA 3 KEGG: 00860+1.3.3.4;Reactome: R-HSA-189451;MetaCyc: PWY-7159 "Porphyrin and chlorophyll metabolism";"Heme biosynthesis";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)" ID=BGER010769-PA|Name=BGER010769-PA 2 KEGG: 00670+2.1.2.10;KEGG: 00260+2.1.2.10 "One carbon pool by folate";"Glycine, serine and threonine metabolism" ID=BGER000272-PA|Name=BGER000272-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER012444-PA|Name=BGER012444-PA 3 Reactome: R-HSA-8866654;MetaCyc: PWY-7511;Reactome: R-HSA-110314 "E3 ubiquitin ligases ubiquitinate target proteins";"Protein ubiquitination";"Recognition of DNA damage by PCNA-containing replication complex" ID=BGER004427-PA|Name=BGER004427-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-1834949;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-76061 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER028330-PA|Name=BGER028330-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER025174-PA|Name=BGER025174-PA 4 Reactome: R-HSA-6782135;Reactome: R-HSA-6781827;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210 "Dual incision in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER" ID=BGER006823-PA|Name=BGER006823-PA 1 Reactome: R-HSA-8850843 "Phosphate bond hydrolysis by NTPDase proteins" ID=BGER020463-PA|Name=BGER020463-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER000088-PA|Name=BGER000088-PA 6 Reactome: R-HSA-5083632;KEGG: 00514+2.4.1.122;Reactome: R-HSA-913709;MetaCyc: PWY-7433;KEGG: 00512+2.4.1.122;MetaCyc: PWY-7290 "Defective C1GALT1C1 causes Tn polyagglutination syndrome (TNPS)";"Other types of O-glycan biosynthesis";"O-linked glycosylation of mucins";"Mucin core 1 and core 2 O-glycosylation";"Mucin type O-glycan biosynthesis";"Escherichia coli serotype O86 O-antigen biosynthesis" ID=BGER013718-PA|Name=BGER013718-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER014997-PA|Name=BGER014997-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER018898-PA|Name=BGER018898-PA 3 Reactome: R-HSA-110357;Reactome: R-HSA-110330;Reactome: R-HSA-110331 "Displacement of DNA glycosylase by APEX1";"Recognition and association of DNA glycosylase with site containing an affected purine";"Cleavage of the damaged purine" ID=BGER004406-PA|Name=BGER004406-PA 16 Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-192823 "Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation" ID=BGER018595-PA|Name=BGER018595-PA 4 KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;MetaCyc: PWY-6855;MetaCyc: PWY-7822 "Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Chitin degradation III (Serratia)" ID=BGER002765-PA|Name=BGER002765-PA 2 KEGG: 00450+2.7.9.3;MetaCyc: PWY-6281 "Selenocompound metabolism";"L-selenocysteine biosynthesis II (archaea and eukaryotes)" ID=BGER004690-PA|Name=BGER004690-PA 7 Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-606279 "Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER018251-PA|Name=BGER018251-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER025916-PA|Name=BGER025916-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER012488-PA|Name=BGER012488-PA 6 MetaCyc: PWY-5497;MetaCyc: PWY-6606;Reactome: R-HSA-74259;KEGG: 00230+3.5.4.3;MetaCyc: PWY-6608;MetaCyc: PWY-7442 "Purine nucleobases degradation II (anaerobic)";"Guanosine nucleotides degradation II";"Purine catabolism";"Purine metabolism";"Guanosine nucleotides degradation III";"Drosopterin and aurodrosopterin biosynthesis" ID=BGER016740-PA|Name=BGER016740-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER003207-PA|Name=BGER003207-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-72702 "Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition" ID=BGER010591-PA|Name=BGER010591-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER027736-PA|Name=BGER027736-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER013217-PA|Name=BGER013217-PA 13 MetaCyc: PWY-6370;KEGG: 00980+2.5.1.18;KEGG: 00053+1.8.5.1;KEGG: 00982+2.5.1.18;Reactome: R-HSA-156590;MetaCyc: PWY-7112;MetaCyc: PWY-2261;KEGG: 00983+2.5.1.18;Reactome: R-HSA-196836;MetaCyc: PWY-6842;KEGG: 00480+2.5.1.18+1.8.5.1;MetaCyc: PWY-7533;MetaCyc: PWY-4061 "Ascorbate recycling (cytosolic)";"Metabolism of xenobiotics by cytochrome P450";"Ascorbate and aldarate metabolism";"Drug metabolism - cytochrome P450";"Glutathione conjugation";"4-hydroxy-2-nonenal detoxification";"Ascorbate glutathione cycle";"Drug metabolism - other enzymes";"Vitamin C (ascorbate) metabolism";"Glutathione-mediated detoxification II";"Glutathione metabolism";"Gliotoxin biosynthesis";"Glutathione-mediated detoxification I" ID=BGER010498-PA|Name=BGER010498-PA 1 Reactome: R-HSA-5693568 "Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER007223-PA|Name=BGER007223-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER012990-PA|Name=BGER012990-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER003452-PA|Name=BGER003452-PA 2 Reactome: R-HSA-163282;Reactome: R-HSA-2151201 "Mitochondrial transcription initiation";"Transcriptional activation of mitochondrial biogenesis" ID=BGER001803-PA|Name=BGER001803-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER003492-PA|Name=BGER003492-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER017060-PA|Name=BGER017060-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER027910-PA|Name=BGER027910-PA 5 Reactome: R-HSA-1266695;Reactome: R-HSA-3214858;Reactome: R-HSA-8939243;Reactome: R-HSA-3247509;Reactome: R-HSA-201722 "Interleukin-7 signaling";"RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"Chromatin modifying enzymes";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER005376-PA|Name=BGER005376-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER022854-PA|Name=BGER022854-PA 8 Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-2565942;Reactome: R-HSA-380259;Reactome: R-HSA-5689880;Reactome: R-HSA-380270;Reactome: R-HSA-5620912;Reactome: R-HSA-380284 "AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Loss of Nlp from mitotic centrosomes";"Ub-specific processing proteases";"Recruitment of mitotic centrosome proteins and complexes";"Anchoring of the basal body to the plasma membrane";"Loss of proteins required for interphase microtubule organization from the centrosome" ID=BGER026951-PA|Name=BGER026951-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" ID=BGER015301-PA|Name=BGER015301-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER012302-PA|Name=BGER012302-PA 2 Reactome: R-HSA-442982;Reactome: R-HSA-5673001 "Ras activation upon Ca2+ influx through NMDA receptor";"RAF/MAP kinase cascade" ID=BGER024704-PA|Name=BGER024704-PA 5 Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-159231 "RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Transport of Mature mRNA Derived from an Intronless Transcript" ID=BGER006434-PA|Name=BGER006434-PA 8 KEGG: 00562+5.5.1.4;MetaCyc: PWY-6372;KEGG: 00521+5.5.1.4;MetaCyc: PWY-2301;Reactome: R-HSA-1855183;MetaCyc: PWY-6664;MetaCyc: PWY-6580;MetaCyc: PWY-4661 "Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)";"Streptomycin biosynthesis";"Myo-inositol biosynthesis";"Synthesis of IP2, IP, and Ins in the cytosol";"Di-myo-inositol phosphate biosynthesis";"Phosphatidylinositol biosynthesis I (bacteria)";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)" ID=BGER017594-PA|Name=BGER017594-PA 3 Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-390471 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER009696-PA|Name=BGER009696-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER007149-PA|Name=BGER007149-PA 14 MetaCyc: PWY-7783;KEGG: 00591+3.1.1.4;KEGG: 00590+3.1.1.4;MetaCyc: PWY-8051;KEGG: 00592+3.1.1.4;MetaCyc: PWY-7409;KEGG: 00565+3.1.1.4;Reactome: R-HSA-975634;Reactome: R-HSA-1482788;MetaCyc: PWY-7417;MetaCyc: PWY-7416;KEGG: 00564+3.1.1.4+3.1.1.5;MetaCyc: PWY-6803;MetaCyc: PWY-8053 "Plasmalogen degradation";"Linoleic acid metabolism";"Arachidonic acid metabolism";"Anandamide biosynthesis I";"alpha-Linolenic acid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Ether lipid metabolism";"Retinoid metabolism and transport";"Acyl chain remodelling of PC";"Phospholipid remodeling (phosphatidate, yeast)";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Anandamide biosynthesis II" ID=BGER024210-PA|Name=BGER024210-PA 2 KEGG: 00440+2.6.1.37;MetaCyc: PWY-6832 "Phosphonate and phosphinate metabolism";"2-aminoethylphosphonate degradation II" ID=BGER024048-PA|Name=BGER024048-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER007531-PA|Name=BGER007531-PA 1 Reactome: R-HSA-196108 "Pregnenolone biosynthesis" ID=BGER025167-PA|Name=BGER025167-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER025677-PA|Name=BGER025677-PA 1 KEGG: 00500+2.4.1.15 "Starch and sucrose metabolism" ID=BGER010317-PA|Name=BGER010317-PA 3 KEGG: 00051+2.7.1.3;Reactome: R-HSA-5657562;Reactome: R-HSA-70350 "Fructose and mannose metabolism";"Essential fructosuria";"Fructose catabolism" ID=BGER018015-PA|Name=BGER018015-PA 14 MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601 "Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" ID=BGER005062-PA|Name=BGER005062-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER005309-PA|Name=BGER005309-PA 2 Reactome: R-HSA-5683371;Reactome: R-HSA-1369007 "Defective ABCB6 causes isolated colobomatous microphthalmia 7 (MCOPCB7)";"Mitochondrial ABC transporters" ID=BGER018182-PA|Name=BGER018182-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER000416-PA|Name=BGER000416-PA 2 Reactome: R-HSA-400253;Reactome: R-HSA-2151201 "Circadian Clock";"Transcriptional activation of mitochondrial biogenesis" ID=BGER025752-PA|Name=BGER025752-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER016306-PA|Name=BGER016306-PA 3 MetaCyc: PWY-7277;KEGG: 00600+3.1.4.12;Reactome: R-HSA-1660662 "Sphingolipid biosynthesis (mammals)";"Sphingolipid metabolism";"Glycosphingolipid metabolism" ID=BGER008687-PA|Name=BGER008687-PA 1 Reactome: R-HSA-388844 "Receptor-type tyrosine-protein phosphatases" ID=BGER026249-PA|Name=BGER026249-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER006175-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012344-PA|Name=BGER012344-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER002730-PA|Name=BGER002730-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695 "Glyoxylate and dicarboxylate metabolism";"Detoxification of Reactive Oxygen Species";"Tryptophan metabolism";"Peroxisomal protein import";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation" ID=BGER026677-PA|Name=BGER026677-PA 5 MetaCyc: PWY-5531;KEGG: 00860+4.1.1.37;MetaCyc: PWY-7159;Reactome: R-HSA-189451;MetaCyc: PWY-7766 "3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)";"Porphyrin and chlorophyll metabolism";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)";"Heme biosynthesis";"Heme b biosynthesis IV (Gram-positive bacteria)" ID=BGER002535-PA|Name=BGER002535-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER014508-PA|Name=BGER014508-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER023209-PA|Name=BGER023209-PA 57 Reactome: R-HSA-382556;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-69601;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-6798695;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-5658442;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902 "ABC-family proteins mediated transport";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"Neutrophil degranulation";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RAS by GAPs";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity" ID=BGER026794-PA|Name=BGER026794-PA 2 Reactome: R-HSA-2022928;MetaCyc: PWY-6558 "HS-GAG biosynthesis";"Heparan sulfate biosynthesis (late stages)" ID=BGER015470-PA|Name=BGER015470-PA 12 Reactome: R-HSA-2142789;MetaCyc: PWY-5873;MetaCyc: PWY-7233;MetaCyc: PWY-5872;MetaCyc: PWY-5855;MetaCyc: PWY-7230;MetaCyc: PWY-6708;MetaCyc: PWY-5870;KEGG: 00130+1.14.99.60;MetaCyc: PWY-5857;MetaCyc: PWY-5856;MetaCyc: PWY-5871 "Ubiquinol biosynthesis";"Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol-6 bypass biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (eukaryotic)";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-10 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (eukaryotic)" ID=BGER003681-PA|Name=BGER003681-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021781-PA|Name=BGER021781-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" ID=BGER023758-PA|Name=BGER023758-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER004659-PA|Name=BGER004659-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER010389-PA|Name=BGER010389-PA 9 Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-5693554;Reactome: R-HSA-5693607;Reactome: R-HSA-6804756;Reactome: R-HSA-5693579;Reactome: R-HSA-69473 "HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Processing of DNA double-strand break ends";"Regulation of TP53 Activity through Phosphorylation";"Homologous DNA Pairing and Strand Exchange";"G2/M DNA damage checkpoint" ID=BGER018961-PA|Name=BGER018961-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER010517-PA|Name=BGER010517-PA 3 Reactome: R-HSA-112311;Reactome: R-HSA-1483191;Reactome: R-HSA-422085 "Neurotransmitter clearance";"Synthesis of PC";"Synthesis, secretion, and deacylation of Ghrelin" ID=BGER022923-PA|Name=BGER022923-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER017420-PA|Name=BGER017420-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" ID=BGER002975-PA|Name=BGER002975-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER009577-PA|Name=BGER009577-PA 2 Reactome: R-HSA-2151201;KEGG: 00760+2.3.1.286 "Transcriptional activation of mitochondrial biogenesis";"Nicotinate and nicotinamide metabolism" ID=BGER010499-PA|Name=BGER010499-PA 3 MetaCyc: PWY-7511;Reactome: R-HSA-983168;Reactome: R-HSA-6807505 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation";"RNA polymerase II transcribes snRNA genes" ID=BGER009073-PA|Name=BGER009073-PA 40 KEGG: 00720+4.2.1.17+1.1.1.35;KEGG: 00310+4.2.1.17+1.1.1.35;MetaCyc: PWY-7606;KEGG: 00380+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17;MetaCyc: PWY-6945;MetaCyc: PWY-5789;KEGG: 00360+4.2.1.17;MetaCyc: PWY-7779;KEGG: 00410+4.2.1.17;KEGG: 00281+4.2.1.17+1.1.1.35;MetaCyc: PWY-7654;MetaCyc: PWY-7094;KEGG: 00362+4.2.1.17+1.1.1.35;MetaCyc: PWY-5177;MetaCyc: PWY-6944;MetaCyc: PWY-6583;MetaCyc: PWY-5109;KEGG: 00930+4.2.1.17+1.1.1.35;MetaCyc: PWY-7656;KEGG: 00071+4.2.1.17+1.1.1.35;MetaCyc: PWY-6946;MetaCyc: PWY-6883;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-5136;KEGG: 00640+4.2.1.17;MetaCyc: PWY-6863;KEGG: 00280+4.2.1.17+1.1.1.35;KEGG: 00062+4.2.1.17+1.1.1.35;KEGG: 00592+4.2.1.17;MetaCyc: PWY-7216;KEGG: 00903+4.2.1.17;MetaCyc: PWY-7007;MetaCyc: PWY-5138;MetaCyc: PWY-7401;MetaCyc: PWY-6435;MetaCyc: PWY-1361;MetaCyc: PWY-7726;MetaCyc: PWY-7778;KEGG: 00623+1.1.1.35 "Carbon fixation pathways in prokaryotes";"Lysine degradation";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Tryptophan metabolism";"Aminobenzoate degradation";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Phenylalanine metabolism";"Methyl tert-butyl ether degradation";"beta-Alanine metabolism";"Geraniol degradation";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Fatty acid salvage";"Benzoate degradation";"Glutaryl-coa degradation";"Androstenedione degradation";"Pyruvate fermentation to butanol I";"Fermentation to 2-methylbutanoate";"Caprolactam degradation";"Spodoptera littoralis pheromone biosynthesis";"Fatty acid degradation";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Pyruvate fermentation to butanol II (engineered)";"Butanoate metabolism";"Fatty acid beta-oxidation II (plant peroxisome)";"Propanoate metabolism";"Pyruvate fermentation to hexanol (engineered)";"Valine, leucine and isoleucine degradation";"Fatty acid elongation";"alpha-Linolenic acid metabolism";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"Limonene and pinene degradation";"Methyl ketone biosynthesis (engineered)";"Fatty acid beta-oxidation IV (unsaturated, even number)";"Crotonate fermentation (to acetate and cyclohexane carboxylate)";"4-hydroxybenzoate biosynthesis III (plants)";"Benzoyl-coa degradation I (aerobic)";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"2-methylpropene degradation";"Toluene degradation" ID=BGER002830-PA|Name=BGER002830-PA 9 MetaCyc: PWY-241;MetaCyc: PWY-5744;MetaCyc: PWY-5743;MetaCyc: PWY-6142;Reactome: R-HSA-1475029;MetaCyc: PWY-7117;MetaCyc: PWY-5789;KEGG: 00910+4.2.1.1;MetaCyc: PWY-7115 "C4 photosynthetic carbon assimilation cycle, NADP-ME type";"Glyoxylate assimilation";"3-hydroxypropanoate cycle";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Reversible hydration of carbon dioxide";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Nitrogen metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type" ID=BGER007268-PA|Name=BGER007268-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER005084-PA|Name=BGER005084-PA 1 Reactome: R-HSA-606279 "Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER014186-PA|Name=BGER014186-PA 10 KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23;KEGG: 00511+3.2.1.23;MetaCyc: PWY-6807;Reactome: R-HSA-6798695;Reactome: R-HSA-2024096;Reactome: R-HSA-2206292;KEGG: 00600+3.2.1.23;Reactome: R-HSA-2160916;KEGG: 00052+3.2.1.23 "Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Other glycan degradation";"Xyloglucan degradation II (exoglucanase)";"Neutrophil degranulation";"HS-GAG degradation";"MPS VII - Sly syndrome";"Sphingolipid metabolism";"Hyaluronan uptake and degradation";"Galactose metabolism" ID=BGER024664-PA|Name=BGER024664-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER016522-PA|Name=BGER016522-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER009918-PA|Name=BGER009918-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER016551-PA|Name=BGER016551-PA 2 MetaCyc: PWY-6281;KEGG: 00970+6.1.1.11 "L-selenocysteine biosynthesis II (archaea and eukaryotes)";"Aminoacyl-tRNA biosynthesis" ID=BGER007267-PA|Name=BGER007267-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER026041-PA|Name=BGER026041-PA 12 Reactome: R-HSA-167238;Reactome: R-HSA-6804756;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-75955;Reactome: R-HSA-6796648;Reactome: R-HSA-167243;Reactome: R-HSA-112382;Reactome: R-HSA-167246 "Pausing and recovery of Tat-mediated HIV elongation";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase II Transcription Elongation";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated HIV elongation arrest and recovery";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript" ID=BGER021943-PA|Name=BGER021943-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER016997-PA|Name=BGER016997-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6;Reactome: R-HSA-3299685;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695 "Glyoxylate and dicarboxylate metabolism";"Peroxisomal protein import";"Tryptophan metabolism";"Detoxification of Reactive Oxygen Species";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation" ID=BGER003790-PA|Name=BGER003790-PA 7 Reactome: R-HSA-389661;Reactome: R-HSA-5362517;KEGG: 00620+1.2.4.1;Reactome: R-HSA-70268;KEGG: 00010+1.2.4.1;Reactome: R-HSA-204174;KEGG: 00020+1.2.4.1 "Glyoxylate metabolism and glycine degradation";"Signaling by Retinoic Acid";"Pyruvate metabolism";"Pyruvate metabolism";"Glycolysis / Gluconeogenesis";"Regulation of pyruvate dehydrogenase (PDH) complex";"Citrate cycle (TCA cycle)" ID=BGER004652-PA|Name=BGER004652-PA 3 Reactome: R-HSA-71336;KEGG: 00030+1.1.1.44;KEGG: 00480+1.1.1.44 "Pentose phosphate pathway";"Pentose phosphate pathway";"Glutathione metabolism" ID=BGER018081-PA|Name=BGER018081-PA 4 Reactome: R-HSA-432720;Reactome: R-HSA-6811440;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Lysosome Vesicle Biogenesis";"Retrograde transport at the Trans-Golgi-Network";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER028441-PA|Name=BGER028441-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER023813-PA|Name=BGER023813-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER008537-PA|Name=BGER008537-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER017325-PA|Name=BGER017325-PA 4 KEGG: 00532+2.4.2.26;Reactome: R-HSA-1971475;KEGG: 00534+2.4.2.26;MetaCyc: PWY-6557 "Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate";"A tetrasaccharide linker sequence is required for GAG synthesis";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin";"Glycosaminoglycan-protein linkage region biosynthesis" ID=BGER004117-PA|Name=BGER004117-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER018018-PA|Name=BGER018018-PA 1 Reactome: R-HSA-429958 "mRNA decay by 3' to 5' exoribonuclease" ID=BGER019823-PA|Name=BGER019823-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER008049-PA|Name=BGER008049-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-5693568 "Fanconi Anemia Pathway";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER016396-PA|Name=BGER016396-PA 11 Reactome: R-HSA-380284;Reactome: R-HSA-2132295;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-6807878;Reactome: R-HSA-3371497;Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-6811436;Reactome: R-HSA-380320;Reactome: R-HSA-8854518 "Loss of proteins required for interphase microtubule organization from the centrosome";"MHC class II antigen presentation";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"COPI-mediated anterograde transport";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"COPI-independent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2" ID=BGER004033-PA|Name=BGER004033-PA 2 Reactome: R-HSA-162588;Reactome: R-HSA-917729 "Budding and maturation of HIV virion";"Endosomal Sorting Complex Required For Transport (ESCRT)" ID=BGER007478-PA|Name=BGER007478-PA 7 MetaCyc: PWY-6724;MetaCyc: PWY-6737;MetaCyc: PWY-7238;KEGG: 00500+2.4.1.25;Reactome: R-HSA-70221;MetaCyc: PWY-5941;Reactome: R-HSA-6798695 "Starch degradation II";"Starch degradation V";"Sucrose biosynthesis II";"Starch and sucrose metabolism";"Glycogen breakdown (glycogenolysis)";"Glycogen degradation II";"Neutrophil degranulation" ID=BGER011575-PA|Name=BGER011575-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER016220-PA|Name=BGER016220-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER011499-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER003216-PA|Name=BGER003216-PA 12 MetaCyc: PWY-5873;Reactome: R-HSA-2142789;KEGG: 00130+2.5.1.39;MetaCyc: PWY-5855;MetaCyc: PWY-5872;Reactome: R-HSA-1268020;MetaCyc: PWY-6708;MetaCyc: PWY-5856;MetaCyc: PWY-5857;MetaCyc: PWY-5871;MetaCyc: PWY-6978;MetaCyc: PWY-5870 "Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol biosynthesis";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-10 biosynthesis (eukaryotic)";"Mitochondrial protein import";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-10 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (eukaryotic)";"Plastoquinol-9 biosynthesis II";"Ubiquinol-8 biosynthesis (eukaryotic)" ID=BGER016410-PA|Name=BGER016410-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER015456-PA|Name=BGER015456-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER014206-PA|Name=BGER014206-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER020949-PA|Name=BGER020949-PA 1 Reactome: R-HSA-390522 "Striated Muscle Contraction" ID=BGER022522-PA|Name=BGER022522-PA 4 Reactome: R-HSA-176187;Reactome: R-HSA-5689880;Reactome: R-HSA-111465;Reactome: R-HSA-5693607 "Activation of ATR in response to replication stress";"Ub-specific processing proteases";"Apoptotic cleavage of cellular proteins";"Processing of DNA double-strand break ends" ID=BGER008798-PA|Name=BGER008798-PA 2 KEGG: 00500+3.2.1.28;Reactome: R-HSA-189085 "Starch and sucrose metabolism";"Digestion of dietary carbohydrate" ID=BGER013319-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER013594-PA|Name=BGER013594-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER005889-PA|Name=BGER005889-PA 16 Reactome: R-HSA-200425;MetaCyc: PWY-5744;KEGG: 00640+6.4.1.2;Reactome: R-HSA-196780;MetaCyc: PWY-6722;MetaCyc: PWY-5966-1;KEGG: 00720+6.4.1.2;KEGG: 00061+6.4.1.2;KEGG: 00620+6.4.1.2;Reactome: R-HSA-2426168;MetaCyc: PWY-5789;Reactome: R-HSA-163765;MetaCyc: PWY-5743;MetaCyc: PWY-6679;KEGG: 00254+6.4.1.2;MetaCyc: PWY-4381 "Carnitine metabolism";"Glyoxylate assimilation";"Propanoate metabolism";"Biotin transport and metabolism";"Candicidin biosynthesis";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"Carbon fixation pathways in prokaryotes";"Fatty acid biosynthesis";"Pyruvate metabolism";"Activation of gene expression by SREBF (SREBP)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"ChREBP activates metabolic gene expression";"3-hydroxypropanoate cycle";"Jadomycin biosynthesis";"Aflatoxin biosynthesis";"Fatty acid biosynthesis initiation (bacteria and plants)" ID=BGER017181-PA|Name=BGER017181-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER006564-PA|Name=BGER006564-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER015824-PA|Name=BGER015824-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER011576-PA|Name=BGER011576-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER027625-PA|Name=BGER027625-PA 1 Reactome: R-HSA-71288 "Creatine metabolism" ID=BGER010235-PA|Name=BGER010235-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER011518-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER020503-PA|Name=BGER020503-PA 26 Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-110320;Reactome: R-HSA-5656121;Reactome: R-HSA-6782210;Reactome: R-HSA-174411;Reactome: R-HSA-69091;Reactome: R-HSA-69166;Reactome: R-HSA-6804114;Reactome: R-HSA-5696400;Reactome: R-HSA-8866654;Reactome: R-HSA-110314;Reactome: R-HSA-1362277;Reactome: R-HSA-5358606;Reactome: R-HSA-110312;Reactome: R-HSA-5358565;Reactome: R-HSA-5696397;Reactome: R-HSA-5655862;Reactome: R-HSA-5651801;Reactome: R-HSA-174414;Reactome: R-HSA-174417;Reactome: R-HSA-69205;Reactome: R-HSA-6782135;Reactome: R-HSA-174437;Reactome: R-HSA-4615885;Reactome: R-HSA-69183 "Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH";"Translesion synthesis by POLI";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Polymerase switching on the C-strand of the telomere";"Polymerase switching";"Removal of the Flap Intermediate";"TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest";"Dual Incision in GG-NER";"E3 ubiquitin ligases ubiquitinate target proteins";"Recognition of DNA damage by PCNA-containing replication complex";"Transcription of E2F targets under negative control by DREAM complex";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Translesion synthesis by REV1";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by POLK";"PCNA-Dependent Long Patch Base Excision Repair";"Processive synthesis on the C-strand of the telomere";"Telomere C-strand (Lagging Strand) Synthesis";"G1/S-Specific Transcription";"Dual incision in TC-NER";"Removal of the Flap Intermediate from the C-strand";"SUMOylation of DNA replication proteins";"Processive synthesis on the lagging strand" ID=BGER026832-PA|Name=BGER026832-PA 2 Reactome: R-HSA-416476;Reactome: R-HSA-388479 "G alpha (q) signalling events";"Vasopressin-like receptors" ID=BGER012421-PA|Name=BGER012421-PA 6 Reactome: R-HSA-3214815;Reactome: R-HSA-9609690;Reactome: R-HSA-1989781;Reactome: R-HSA-9029569;Reactome: R-HSA-9022537;Reactome: R-HSA-9022692 "HDACs deacetylate histones";"HCMV Early Events";"PPARA activates gene expression";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Loss of MECP2 binding ability to the NCoR/SMRT complex";"Regulation of MECP2 expression and activity" ID=BGER026142-PA|Name=BGER026142-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER025244-PA|Name=BGER025244-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER023372-PA|Name=BGER023372-PA 1 Reactome: R-HSA-163841 "Gamma carboxylation, hypusine formation and arylsulfatase activation" ID=BGER022789-PA|Name=BGER022789-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER013202-PA|Name=BGER013202-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER029854-PA|Name=BGER029854-PA 1 Reactome: R-HSA-196819 "Vitamin B1 (thiamin) metabolism" ID=BGER009571-PA|Name=BGER009571-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER029933-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER017958-PA|Name=BGER017958-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" ID=BGER016141-PA|Name=BGER016141-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008689-PA|Name=BGER008689-PA 3 Reactome: R-HSA-5423646;MetaCyc: PWY-7533;Reactome: R-HSA-2142691 "Aflatoxin activation and detoxification";"Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" ID=BGER021451-PA|Name=BGER021451-PA 4 KEGG: 00330+1.5.5.2;MetaCyc: PWY-6922;MetaCyc: PWY-5737;Reactome: R-HSA-70688 "Arginine and proline metabolism";"L-Ndelta-acetylornithine biosynthesis";"(5R)-carbapenem carboxylate biosynthesis";"Proline catabolism" ID=BGER022620-PA|Name=BGER022620-PA 4 MetaCyc: PWY-6902;MetaCyc: PWY-6855;MetaCyc: PWY-7822;KEGG: 00520+3.2.1.14 "Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism" ID=BGER008616-PA|Name=BGER008616-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER020818-PA|Name=BGER020818-PA 2 Reactome: R-HSA-390471;Reactome: R-HSA-1660662 "Association of TriC/CCT with target proteins during biosynthesis";"Glycosphingolipid metabolism" ID=BGER010592-PA|Name=BGER010592-PA 19 Reactome: R-HSA-72689;Reactome: R-HSA-6790901;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-3214858;Reactome: R-HSA-8876725;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"rRNA modification in the nucleus and cytosol";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"RMTs methylate histone arginines";"Protein methylation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER012792-PA|Name=BGER012792-PA 2 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603 "DNA Damage Recognition in GG-NER";"UCH proteinases" ID=BGER005613-PA|Name=BGER005613-PA 6 Reactome: R-HSA-110362;Reactome: R-HSA-73930;Reactome: R-HSA-110357;Reactome: R-HSA-73933;Reactome: R-HSA-110373;Reactome: R-HSA-5651801 "POLB-Dependent Long Patch Base Excision Repair";"Abasic sugar-phosphate removal via the single-nucleotide replacement pathway";"Displacement of DNA glycosylase by APEX1";"Resolution of Abasic Sites (AP sites)";"Resolution of AP sites via the multiple-nucleotide patch replacement pathway";"PCNA-Dependent Long Patch Base Excision Repair" ID=BGER022741-PA|Name=BGER022741-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-9633012 "Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER001519-PA|Name=BGER001519-PA 6 Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220 "Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins" ID=BGER029631-PA|Name=BGER029631-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER015806-PA|Name=BGER015806-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" ID=BGER006916-PA|Name=BGER006916-PA 14 MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7619;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433 "Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Juniperonate biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)" ID=BGER015783-PA|Name=BGER015783-PA 17 Reactome: R-HSA-5696400;Reactome: R-HSA-110314;Reactome: R-HSA-5358606;Reactome: R-HSA-6782210;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-69091;Reactome: R-HSA-69166;Reactome: R-HSA-174411;Reactome: R-HSA-174437;Reactome: R-HSA-69183;Reactome: R-HSA-5696397;Reactome: R-HSA-5358565;Reactome: R-HSA-6782135;Reactome: R-HSA-174414;Reactome: R-HSA-5651801;Reactome: R-HSA-174417 "Dual Incision in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Polymerase switching";"Removal of the Flap Intermediate";"Polymerase switching on the C-strand of the telomere";"Removal of the Flap Intermediate from the C-strand";"Processive synthesis on the lagging strand";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Dual incision in TC-NER";"Processive synthesis on the C-strand of the telomere";"PCNA-Dependent Long Patch Base Excision Repair";"Telomere C-strand (Lagging Strand) Synthesis" ID=BGER021243-PA|Name=BGER021243-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER003970-PA|Name=BGER003970-PA 8 Reactome: R-HSA-9613354;Reactome: R-HSA-1632852;Reactome: R-HSA-9619483;Reactome: R-HSA-5628897;Reactome: R-HSA-1445148;Reactome: R-HSA-6804756;Reactome: R-HSA-2151209;Reactome: R-HSA-380972 "Lipophagy";"Macroautophagy";"Activation of AMPK downstream of NMDARs";"TP53 Regulates Metabolic Genes";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Regulation of TP53 Activity through Phosphorylation";"Activation of PPARGC1A (PGC-1alpha) by phosphorylation";"Energy dependent regulation of mTOR by LKB1-AMPK" ID=BGER012938-PA|Name=BGER012938-PA 56 Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783 "Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Degradation of AXIN";"Separation of Sister Chromatids";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome" ID=BGER019140-PA|Name=BGER019140-PA 9 Reactome: R-HSA-1368108;Reactome: R-HSA-400206;Reactome: R-HSA-191859;Reactome: R-HSA-2426168;Reactome: R-HSA-381340;Reactome: R-HSA-2151201;Reactome: R-HSA-400253;Reactome: R-HSA-1368082;Reactome: R-HSA-1989781 "BMAL1:CLOCK,NPAS2 activates circadian gene expression";"Regulation of lipid metabolism by PPARalpha";"snRNP Assembly";"Activation of gene expression by SREBF (SREBP)";"Transcriptional regulation of white adipocyte differentiation";"Transcriptional activation of mitochondrial biogenesis";"Circadian Clock";"RORA activates gene expression";"PPARA activates gene expression" ID=BGER010391-PA|Name=BGER010391-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-1482798 "Mitochondrial protein import";"Acyl chain remodeling of CL" ID=BGER002440-PA|Name=BGER002440-PA 4 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16;Reactome: R-HSA-180024 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation";"DARPP-32 events" ID=BGER017488-PA|Name=BGER017488-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER024806-PA|Name=BGER024806-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-7782;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax esters biosynthesis I";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER003799-PA|Name=BGER003799-PA 7 Reactome: R-HSA-212436;Reactome: R-HSA-2894862;Reactome: R-HSA-2173796;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER007017-PA|Name=BGER007017-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER018359-PA|Name=BGER018359-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" ID=BGER024666-PA|Name=BGER024666-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER026839-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER011730-PA|Name=BGER011730-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER022785-PA|Name=BGER022785-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-8876198;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"RAB GEFs exchange GTP for GDP on RABs";"Intra-Golgi traffic" ID=BGER014269-PA|Name=BGER014269-PA 2 Reactome: R-HSA-5689603;Reactome: R-HSA-5689880 "UCH proteinases";"Ub-specific processing proteases" ID=BGER026885-PA|Name=BGER026885-PA 15 Reactome: R-HSA-174048;Reactome: R-HSA-179409;Reactome: R-HSA-174178;Reactome: R-HSA-174084;Reactome: R-HSA-2467813;Reactome: R-HSA-176409;Reactome: R-HSA-2559582;Reactome: R-HSA-141430;Reactome: R-HSA-174184;Reactome: R-HSA-176412;Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-174154;Reactome: R-HSA-8853884;Reactome: R-HSA-176407 "APC/C:Cdc20 mediated degradation of Cyclin B";"APC-Cdc20 mediated degradation of Nek2A";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Separation of Sister Chromatids";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Senescence-Associated Secretory Phenotype (SASP)";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Phosphorylation of the APC/C";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Transcriptional Regulation by VENTX";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase" ID=BGER024777-PA|Name=BGER024777-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER007681-PA|Name=BGER007681-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" ID=BGER002512-PA|Name=BGER002512-PA 2 Reactome: R-HSA-8866423;Reactome: R-HSA-8963888 "VLDL assembly";"Chylomicron assembly" ID=BGER007238-PA|Name=BGER007238-PA 57 Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-5607764;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253 "Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"CLEC7A (Dectin-1) signaling";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex" ID=BGER028243-PA|Name=BGER028243-PA 4 Reactome: R-HSA-975138;Reactome: R-HSA-6799198;Reactome: R-HSA-975871;Reactome: R-HSA-166058 "TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation";"Complex I biogenesis";"MyD88 cascade initiated on plasma membrane";"MyD88:MAL(TIRAP) cascade initiated on plasma membrane" ID=BGER022542-PA|Name=BGER022542-PA 5 Reactome: R-HSA-9029558;Reactome: R-HSA-75105;Reactome: R-HSA-163765;Reactome: R-HSA-2426168;Reactome: R-HSA-199220 "NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis";"ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)";"Vitamin B5 (pantothenate) metabolism" ID=BGER001811-PA|Name=BGER001811-PA 13 Reactome: R-HSA-416482;Reactome: R-HSA-416572;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-5627117;Reactome: R-HSA-3928663;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-4420097;KEGG: 04151+2.7.11.1;Reactome: R-HSA-3928662;KEGG: 05170+2.7.11.1 "G alpha (12/13) signalling events";"Sema4D induced cell migration and growth-cone collapse";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway";"RHO GTPases Activate ROCKs";"EPHA-mediated growth cone collapse";"Human papillomavirus infection";"Human cytomegalovirus infection";"VEGFA-VEGFR2 Pathway";"PI3K-Akt signaling pathway";"EPHB-mediated forward signaling";"Human immunodeficiency virus 1 infection" ID=BGER026965-PA|Name=BGER026965-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER003131-PA|Name=BGER003131-PA 2 KEGG: 00520+2.4.1.16;MetaCyc: PWY-6981 "Amino sugar and nucleotide sugar metabolism";"Chitin biosynthesis" ID=BGER000106-PA|Name=BGER000106-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER008845-PA|Name=BGER008845-PA 4 Reactome: R-HSA-4549349;KEGG: 00513+2.4.1.257+2.4.1.132;Reactome: R-HSA-446193;KEGG: 00510+2.4.1.257+2.4.1.132 "Defective ALG2 causes ALG2-CDG (CDG-1i)";"Various types of N-glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"N-Glycan biosynthesis" ID=BGER028802-PA|Name=BGER028802-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER026410-PB|Name=BGER026410-PB 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER001622-PA|Name=BGER001622-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-1222556;Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-917977 "Insulin receptor recycling";"ROS and RNS production in phagocytes";"Amino acids regulate mTORC1";"Ion channel transport";"Transferrin endocytosis and recycling" ID=BGER006251-PA|Name=BGER006251-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER001212-PA|Name=BGER001212-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" ID=BGER007832-PA|Name=BGER007832-PA 2 Reactome: R-HSA-1237112;KEGG: 00270+3.1.3.77 "Methionine salvage pathway";"Cysteine and methionine metabolism" ID=BGER013957-PA|Name=BGER013957-PA 2 Reactome: R-HSA-5654726;Reactome: R-HSA-190373 "Negative regulation of FGFR1 signaling";"FGFR1c ligand binding and activation" ID=BGER024825-PB|Name=BGER024825-PB 4 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;Reactome: R-HSA-6807505 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"RNA polymerase II transcribes snRNA genes" ID=BGER024808-PA|Name=BGER024808-PA 8 KEGG: 00250+6.3.4.5;Reactome: R-HSA-70635;KEGG: 00220+6.3.4.5;MetaCyc: PWY-4983;MetaCyc: PWY-7400;MetaCyc: PWY-4984;MetaCyc: PWY-5154;MetaCyc: PWY-5 "Alanine, aspartate and glutamate metabolism";"Urea cycle";"Arginine biosynthesis";"Nitric oxide biosynthesis II (mammals)";"L-arginine biosynthesis IV (archaebacteria)";"Urea cycle";"L-arginine biosynthesis III (via N-acetyl-L-citrulline)";"Canavanine biosynthesis" ID=BGER007085-PA|Name=BGER007085-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER027835-PA|Name=BGER027835-PA 5 KEGG: 00564+2.7.7.41;KEGG: 04070+2.7.7.41;MetaCyc: PWY-5667;MetaCyc: PWY-7817;MetaCyc: PWY-5981 "Glycerophospholipid metabolism";"Phosphatidylinositol signaling system";"CDP-diacylglycerol biosynthesis I";"Type I lipoteichoic acid biosynthesis (S. aureus)";"CDP-diacylglycerol biosynthesis III" ID=BGER014675-PA|Name=BGER014675-PA 5 Reactome: R-HSA-5694530;Reactome: R-HSA-204005;Reactome: R-HSA-983170;Reactome: R-HSA-1655829;Reactome: R-HSA-2132295 "Cargo concentration in the ER";"COPII-mediated vesicle transport";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Regulation of cholesterol biosynthesis by SREBP (SREBF)";"MHC class II antigen presentation" ID=BGER012104-PA|Name=BGER012104-PA 1 Reactome: R-HSA-390522 "Striated Muscle Contraction" ID=BGER001737-PA|Name=BGER001737-PA 3 Reactome: R-HSA-110357;Reactome: R-HSA-110329;Reactome: R-HSA-110328 "Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine" ID=BGER026067-PA|Name=BGER026067-PA 15 Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6796648;Reactome: R-HSA-176034;Reactome: R-HSA-112382;Reactome: R-HSA-167243;Reactome: R-HSA-167200;Reactome: R-HSA-75955;Reactome: R-HSA-9018519;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167238;Reactome: R-HSA-674695;Reactome: R-HSA-2173796 "RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes";"Interactions of Tat with host cellular proteins";"Formation of RNA Pol II elongation complex";"Tat-mediated HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Transcription Elongation";"Estrogen-dependent gene expression";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription" ID=BGER024246-PA|Name=BGER024246-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022228-PA|Name=BGER022228-PA 1 Reactome: R-HSA-427413 "NoRC negatively regulates rRNA expression" ID=BGER020248-PA|Name=BGER020248-PA 4 MetaCyc: PWY-6829;MetaCyc: PWY-7285;Reactome: R-HSA-6782315;MetaCyc: PWY-7286 "Trna methylation (yeast)";"Methylwyosine biosynthesis";"tRNA modification in the nucleus and cytosol";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis" ID=BGER003077-PA|Name=BGER003077-PA 9 MetaCyc: PWY-5265;MetaCyc: PWY-6470;KEGG: 00510+2.4.1.141;KEGG: 00550+2.4.1.227;Reactome: R-HSA-446193;MetaCyc: PWY-6385;Reactome: R-HSA-5633231;MetaCyc: PWY-6471;KEGG: 00513+2.4.1.141 "Peptidoglycan biosynthesis II (staphylococci)";"Peptidoglycan biosynthesis V (beta-lactam resistance)";"N-Glycan biosynthesis";"Peptidoglycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Peptidoglycan biosynthesis III (mycobacteria)";"Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)";"Peptidoglycan biosynthesis IV (Enterococcus faecium)";"Various types of N-glycan biosynthesis" ID=BGER003782-PA|Name=BGER003782-PA 1 Reactome: R-HSA-9033241 "Peroxisomal protein import" ID=BGER022881-PA|Name=BGER022881-PA 6 Reactome: R-HSA-110362;Reactome: R-HSA-174437;Reactome: R-HSA-5685939;Reactome: R-HSA-5651801;Reactome: R-HSA-69166;Reactome: R-HSA-162594 "POLB-Dependent Long Patch Base Excision Repair";"Removal of the Flap Intermediate from the C-strand";"HDR through MMEJ (alt-NHEJ)";"PCNA-Dependent Long Patch Base Excision Repair";"Removal of the Flap Intermediate";"Early Phase of HIV Life Cycle" ID=BGER027269-PA|Name=BGER027269-PA 4 Reactome: R-HSA-964975;KEGG: 00750+1.4.3.5;MetaCyc: PWY-7282;MetaCyc: PWY-7204 "Vitamins B6 activation to pyridoxal phosphate";"Vitamin B6 metabolism";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis";"Pyridoxal 5'-phosphate salvage II (plants)" ID=BGER019713-PA|Name=BGER019713-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER005054-PA|Name=BGER005054-PA 18 KEGG: 00590+3.1.1.4;MetaCyc: PWY-8051;Reactome: R-HSA-1482801;Reactome: R-HSA-1482788;MetaCyc: PWY-7416;MetaCyc: PWY-8053;KEGG: 00591+3.1.1.4;Reactome: R-HSA-1482839;MetaCyc: PWY-7409;KEGG: 00592+3.1.1.4;KEGG: 00565+3.1.1.4;MetaCyc: PWY-7417;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;Reactome: R-HSA-1482922;Reactome: R-HSA-1482925;Reactome: R-HSA-1483166;MetaCyc: PWY-7783 "Arachidonic acid metabolism";"Anandamide biosynthesis I";"Acyl chain remodelling of PS";"Acyl chain remodelling of PC";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Anandamide biosynthesis II";"Linoleic acid metabolism";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"alpha-Linolenic acid metabolism";"Ether lipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Acyl chain remodelling of PI";"Acyl chain remodelling of PG";"Synthesis of PA";"Plasmalogen degradation" ID=BGER020487-PA|Name=BGER020487-PA 14 Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167242;Reactome: R-HSA-167158;Reactome: R-HSA-75955;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167200;Reactome: R-HSA-112382;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-6796648;Reactome: R-HSA-167246 "RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Transcription Elongation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of RNA Pol II elongation complex";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated elongation of the HIV-1 transcript" ID=BGER019484-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER027490-PA|Name=BGER027490-PA 7 MetaCyc: PWY-7805;MetaCyc: PWY-7807;MetaCyc: PWY-6605;Reactome: R-HSA-74217;KEGG: 00230+2.4.2.7;Reactome: R-HSA-6798695;MetaCyc: PWY-6610 "(aminomethyl)phosphonate degradation";"Glyphosate degradation III";"Adenine and adenosine salvage II";"Purine salvage";"Purine metabolism";"Neutrophil degranulation";"Adenine salvage" ID=BGER028668-PA|Name=BGER028668-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER024506-PA|Name=BGER024506-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER001277-PA|Name=BGER001277-PA 3 Reactome: R-HSA-6782315;MetaCyc: PWY-7888;MetaCyc: PWY-6829 "tRNA modification in the nucleus and cytosol";"Trna-uridine 2-thiolation (cytoplasmic)";"Trna methylation (yeast)" ID=BGER015063-PA|Name=BGER015063-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" ID=BGER024327-PA|Name=BGER024327-PA 1 KEGG: 00900+3.4.24.84 "Terpenoid backbone biosynthesis" ID=BGER009099-PA|Name=BGER009099-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" ID=BGER022607-PA|Name=BGER022607-PA 18 KEGG: 00401+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00400+2.6.1.1;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00960+2.6.1.1;KEGG: 00360+2.6.1.1;MetaCyc: PWY-6642;MetaCyc: PWY-7117;KEGG: 00330+2.6.1.1;MetaCyc: PWY-5913;MetaCyc: PWY-7383;KEGG: 00950+2.6.1.1;KEGG: 00220+2.6.1.1;KEGG: 00350+2.6.1.1;KEGG: 00270+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00710+2.6.1.1 "Novobiocin biosynthesis";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Tropane, piperidine and pyridine alkaloid biosynthesis";"Phenylalanine metabolism";"(R)-cysteate degradation";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Arginine and proline metabolism";"Partial TCA cycle (obligate autotrophs)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Isoquinoline alkaloid biosynthesis";"Arginine biosynthesis";"Tyrosine metabolism";"Cysteine and methionine metabolism";"Coenzyme M biosynthesis II";"Carbon fixation in photosynthetic organisms" ID=BGER027834-PA|Name=BGER027834-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-8856825;Reactome: R-HSA-6781823;Reactome: R-HSA-8951664 "DNA Damage Recognition in GG-NER";"Cargo recognition for clathrin-mediated endocytosis";"Formation of TC-NER Pre-Incision Complex";"Neddylation" ID=BGER026252-PA|Name=BGER026252-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER004477-PA|Name=BGER004477-PA 2 KEGG: 00513+2.4.1.142;KEGG: 00510+2.4.1.142 "Various types of N-glycan biosynthesis";"N-Glycan biosynthesis" ID=BGER018252-PA|Name=BGER018252-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER020837-PA|Name=BGER020837-PA 11 Reactome: R-HSA-1368108;Reactome: R-HSA-2426168;Reactome: R-HSA-400206;Reactome: R-HSA-212436;Reactome: R-HSA-2151201;Reactome: R-HSA-381340;Reactome: R-HSA-383280;Reactome: R-HSA-400253;Reactome: R-HSA-9018519;Reactome: R-HSA-1989781;Reactome: R-HSA-1368082 "BMAL1:CLOCK,NPAS2 activates circadian gene expression";"Activation of gene expression by SREBF (SREBP)";"Regulation of lipid metabolism by PPARalpha";"Generic Transcription Pathway";"Transcriptional activation of mitochondrial biogenesis";"Transcriptional regulation of white adipocyte differentiation";"Nuclear Receptor transcription pathway";"Circadian Clock";"Estrogen-dependent gene expression";"PPARA activates gene expression";"RORA activates gene expression" ID=BGER011698-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER011903-PA|Name=BGER011903-PA 7 Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-73780;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER024592-PA|Name=BGER024592-PA 57 Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5658442;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5610783;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-6798695;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-195253;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-382556 "Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of RAS by GAPs";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Degradation of GLI2 by the proteasome";"Separation of Sister Chromatids";"Degradation of AXIN";"Neutrophil degranulation";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Degradation of beta-catenin by the destruction complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Ub-specific processing proteases";"Degradation of DVL";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"UCH proteinases";"Activation of NF-kappaB in B cells";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport" ID=BGER005033-PA|Name=BGER005033-PA 7 KEGG: 00480+6.3.2.2;KEGG: 00270+6.3.2.2;Reactome: R-HSA-5578999;MetaCyc: PWY-8043;Reactome: R-HSA-174403;MetaCyc: PWY-6840;MetaCyc: PWY-7255 "Glutathione metabolism";"Cysteine and methionine metabolism";"Defective GCLC causes Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (HAGGSD)";"Ophthalmate biosynthesis";"Glutathione synthesis and recycling";"Homoglutathione biosynthesis";"Ergothioneine biosynthesis I (bacteria)" ID=BGER016852-PA|Name=BGER016852-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER015348-PA|Name=BGER015348-PA 3 Reactome: R-HSA-4724325;KEGG: 00510+2.4.1.265;Reactome: R-HSA-446193 "Defective ALG8 causes ALG8-CDG (CDG-1h)";"N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" ID=BGER018574-PA|Name=BGER018574-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER009332-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER022749-PA|Name=BGER022749-PA 1 KEGG: 00970+6.1.1.22 "Aminoacyl-tRNA biosynthesis" ID=BGER026312-PA|Name=BGER026312-PA 5 Reactome: R-HSA-5689880;Reactome: R-HSA-8948751;Reactome: R-HSA-201681;Reactome: R-HSA-5545619;Reactome: R-HSA-4641257 "Ub-specific processing proteases";"Regulation of PTEN stability and activity";"TCF dependent signaling in response to WNT";"XAV939 inhibits tankyrase, stabilizing AXIN";"Degradation of AXIN" ID=BGER010251-PA|Name=BGER010251-PA 3 KEGG: 00510+2.4.1.144;Reactome: R-HSA-975574;MetaCyc: PWY-7426 "N-Glycan biosynthesis";"Reactions specific to the hybrid N-glycan synthesis pathway";"Complex N-linked glycan biosynthesis (vertebrates)" ID=BGER010991-PA|Name=BGER010991-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER019378-PA|Name=BGER019378-PA 2 Reactome: R-HSA-917729;Reactome: R-HSA-9610379 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events" ID=BGER014169-PA|Name=BGER014169-PA 5 Reactome: R-HSA-204005;Reactome: R-HSA-5694530;Reactome: R-HSA-983170;Reactome: R-HSA-2132295;Reactome: R-HSA-1655829 "COPII-mediated vesicle transport";"Cargo concentration in the ER";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"MHC class II antigen presentation";"Regulation of cholesterol biosynthesis by SREBP (SREBF)" ID=BGER018245-PA|Name=BGER018245-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER016567-PA|Name=BGER016567-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER009334-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER013992-PA|Name=BGER013992-PA 3 Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-429947 "KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Deadenylation of mRNA" ID=BGER019148-PA|Name=BGER019148-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER009736-PA|Name=BGER009736-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" ID=BGER014171-PA|Name=BGER014171-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER015036-PA|Name=BGER015036-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER020966-PA|Name=BGER020966-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER028907-PA|Name=BGER028907-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER000100-PA|Name=BGER000100-PA 1 MetaCyc: PWY-6938 "NADH repair" ID=BGER003474-PA|Name=BGER003474-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER003852-PA|Name=BGER003852-PA 1 KEGG: 00860+4.4.1.17 "Porphyrin and chlorophyll metabolism" ID=BGER008826-PA|Name=BGER008826-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER023314-PA|Name=BGER023314-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER001489-PB|Name=BGER001489-PB 5 Reactome: R-HSA-3249367;Reactome: R-HSA-3270619;Reactome: R-HSA-3134975;Reactome: R-HSA-1834941;Reactome: R-HSA-6798695 "STAT6-mediated induction of chemokines";"IRF3-mediated induction of type I IFN";"Regulation of innate immune responses to cytosolic DNA";"STING mediated induction of host immune responses";"Neutrophil degranulation" ID=BGER001044-PA|Name=BGER001044-PA 11 MetaCyc: PWY-7268;MetaCyc: PWY-6549;KEGG: 00020+1.1.1.42;KEGG: 00480+1.1.1.42;MetaCyc: PWY-6728;MetaCyc: PWY-5913;MetaCyc: PWY-7124;KEGG: 00720+1.1.1.42;Reactome: R-HSA-71403;MetaCyc: PWY-7254;MetaCyc: PWY-6969 "NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"L-glutamine biosynthesis III";"Citrate cycle (TCA cycle)";"Glutathione metabolism";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)";"Ethylene biosynthesis V (engineered)";"Carbon fixation pathways in prokaryotes";"Citric acid cycle (TCA cycle)";"TCA cycle VII (acetate-producers)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)" ID=BGER009385-PA|Name=BGER009385-PA 3 Reactome: R-HSA-6799198;Reactome: R-HSA-1268020;Reactome: R-HSA-611105 "Complex I biogenesis";"Mitochondrial protein import";"Respiratory electron transport" ID=BGER024965-PA|Name=BGER024965-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012486-PA|Name=BGER012486-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER008327-PA|Name=BGER008327-PA 6 Reactome: R-HSA-6782210;Reactome: R-HSA-72163;Reactome: R-HSA-6781823;MetaCyc: PWY-7511;Reactome: R-HSA-6781827;Reactome: R-HSA-6782135 "Gap-filling DNA repair synthesis and ligation in TC-NER";"mRNA Splicing - Major Pathway";"Formation of TC-NER Pre-Incision Complex";"Protein ubiquitination";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER" ID=BGER028064-PA|Name=BGER028064-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER029548-PA|Name=BGER029548-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER011608-PA|Name=BGER011608-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER022190-PA|Name=BGER022190-PA 8 Reactome: R-HSA-5685942;Reactome: R-HSA-912446;Reactome: R-HSA-5693568;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-5693554;Reactome: R-HSA-5693579;Reactome: R-HSA-8953750 "HDR through Homologous Recombination (HRR)";"Meiotic recombination";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Homologous DNA Pairing and Strand Exchange";"Transcriptional Regulation by E2F6" ID=BGER016257-PA|Name=BGER016257-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER019768-PA|Name=BGER019768-PA 10 Reactome: R-HSA-9648895;Reactome: R-HSA-381042;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-382556;Reactome: R-HSA-72731;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Response of EIF2AK1 (HRI) to heme deficiency";"PERK regulates gene expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"ABC-family proteins mediated transport";"Recycling of eIF2:GDP";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER007692-PA|Name=BGER007692-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER022992-PA|Name=BGER022992-PA 26 Reactome: R-HSA-8852276;Reactome: R-HSA-190861;Reactome: R-HSA-389977;Reactome: R-HSA-380320;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-5617833;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-2500257;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-389960;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-9646399;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-5626467;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220 "The role of GTSE1 in G2/M progression after G2 checkpoint";"Gap junction assembly";"Post-chaperonin tubulin folding pathway";"Recruitment of NuMA to mitotic centrosomes";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Cilium Assembly";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Resolution of Sister Chromatid Cohesion";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Formation of tubulin folding intermediates by CCT/TriC";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Aggrephagy";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"RHO GTPases activate IQGAPs";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"Separation of Sister Chromatids";"RHO GTPases Activate Formins" ID=BGER018278-PA|Name=BGER018278-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER020930-PA|Name=BGER020930-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER022447-PA|Name=BGER022447-PA 2 Reactome: R-HSA-8949664;Reactome: R-HSA-8949215 "Processing of SMDT1";"Mitochondrial calcium ion transport" ID=BGER025493-PA|Name=BGER025493-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER021634-PA|Name=BGER021634-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER014236-PA|Name=BGER014236-PA 1 Reactome: R-HSA-5658442 "Regulation of RAS by GAPs" ID=BGER029622-PA|Name=BGER029622-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER015822-PA|Name=BGER015822-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER003640-PA|Name=BGER003640-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER000737-PA|Name=BGER000737-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER007124-PA|Name=BGER007124-PA 17 Reactome: R-HSA-2871837;Reactome: R-HSA-450302;Reactome: R-HSA-937072;Reactome: R-HSA-4086398;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-9645460;Reactome: R-HSA-445989;Reactome: R-HSA-168638;Reactome: R-HSA-450321;Reactome: R-HSA-5689880;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-975163;Reactome: R-HSA-5357956;Reactome: R-HSA-937042;Reactome: R-HSA-9014325 "FCERI mediated NF-kB activation";"activated TAK1 mediates p38 MAPK activation";"TRAF6-mediated induction of TAK1 complex within TLR4 complex";"Ca2+ pathway";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"Alpha-protein kinase 1 signaling pathway";"TAK1 activates NFkB by phosphorylation and activation of IKKs complex";"NOD1/2 Signaling Pathway";"JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1";"Ub-specific processing proteases";"Downstream TCR signaling";"Interleukin-1 signaling";"IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation";"TNFR1-induced NFkappaB signaling pathway";"IRAK2 mediated activation of TAK1 complex";"TICAM1,TRAF6-dependent induction of TAK1 complex" ID=BGER007618-PA|Name=BGER007618-PA 2 Reactome: R-HSA-2132295;Reactome: R-HSA-877300 "MHC class II antigen presentation";"Interferon gamma signaling" ID=BGER010960-PA|Name=BGER010960-PA 26 Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-5617833;Reactome: R-HSA-389977;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-5626467;Reactome: R-HSA-9646399;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-389960;Reactome: R-HSA-2500257;Reactome: R-HSA-6811436;Reactome: R-HSA-437239 "MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Cilium Assembly";"Post-chaperonin tubulin folding pathway";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"RHO GTPases activate IQGAPs";"Aggrephagy";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Formation of tubulin folding intermediates by CCT/TriC";"Resolution of Sister Chromatid Cohesion";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1" ID=BGER008005-PA|Name=BGER008005-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER006004-PA|Name=BGER006004-PA 7 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection" ID=BGER002003-PA|Name=BGER002003-PA 16 Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis" ID=BGER029063-PA|Name=BGER029063-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER002653-PA|Name=BGER002653-PA 1 Reactome: R-HSA-74217 "Purine salvage" ID=BGER004531-PA|Name=BGER004531-PA 14 MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601 "Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" ID=BGER028497-PA|Name=BGER028497-PA 13 KEGG: 00983+2.5.1.18;Reactome: R-HSA-196836;MetaCyc: PWY-6842;KEGG: 00480+2.5.1.18+1.8.5.1;MetaCyc: PWY-7533;MetaCyc: PWY-4061;MetaCyc: PWY-6370;KEGG: 00980+2.5.1.18;KEGG: 00053+1.8.5.1;KEGG: 00982+2.5.1.18;Reactome: R-HSA-156590;MetaCyc: PWY-7112;MetaCyc: PWY-2261 "Drug metabolism - other enzymes";"Vitamin C (ascorbate) metabolism";"Glutathione-mediated detoxification II";"Glutathione metabolism";"Gliotoxin biosynthesis";"Glutathione-mediated detoxification I";"Ascorbate recycling (cytosolic)";"Metabolism of xenobiotics by cytochrome P450";"Ascorbate and aldarate metabolism";"Drug metabolism - cytochrome P450";"Glutathione conjugation";"4-hydroxy-2-nonenal detoxification";"Ascorbate glutathione cycle" ID=BGER020389-PA|Name=BGER020389-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER029030-PA|Name=BGER029030-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER022457-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER001264-PA|Name=BGER001264-PA 8 Reactome: R-HSA-8950505;KEGG: 00030+2.2.1.2;Reactome: R-HSA-71336;MetaCyc: PWY-5723;MetaCyc: PWY-1861;Reactome: R-HSA-6791462;Reactome: R-HSA-163754;Reactome: R-HSA-6791055 "Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Pentose phosphate pathway";"Pentose phosphate pathway";"Rubisco shunt";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"TALDO1 deficiency: failed conversion of Fru(6)P, E4P to SH7P, GA3P";"Insulin effects increased synthesis of Xylulose-5-Phosphate";"TALDO1 deficiency: failed conversion of SH7P, GA3P to Fru(6)P, E4P" ID=BGER023400-PA|Name=BGER023400-PA 2 Reactome: R-HSA-2022854;Reactome: R-HSA-975577 "Keratan sulfate biosynthesis";"N-Glycan antennae elongation" ID=BGER010255-PA|Name=BGER010255-PA 4 Reactome: R-HSA-196741;Reactome: R-HSA-3359462;Reactome: R-HSA-8964011;Reactome: R-HSA-3359463 "Cobalamin (Cbl, vitamin B12) transport and metabolism";"Defective AMN causes hereditary megaloblastic anemia 1";"HDL clearance";"Defective CUBN causes hereditary megaloblastic anemia 1" ID=BGER014515-PA|Name=BGER014515-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER027912-PA|Name=BGER027912-PA 7 KEGG: 04070+3.1.3.25;KEGG: 00562+3.1.3.25;MetaCyc: PWY-2301;MetaCyc: PWY-4702;KEGG: 00521+3.1.3.25;MetaCyc: PWY-6363;Reactome: R-HSA-1855183 "Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"Myo-inositol biosynthesis";"Phytate degradation I";"Streptomycin biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate degradation";"Synthesis of IP2, IP, and Ins in the cytosol" ID=BGER026377-PA|Name=BGER026377-PA 3 Reactome: R-HSA-2206282;KEGG: 00531+3.2.1.50;Reactome: R-HSA-2024096 "MPS IIIB - Sanfilippo syndrome B";"Glycosaminoglycan degradation";"HS-GAG degradation" ID=BGER010674-PA|Name=BGER010674-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-5693568 "Fanconi Anemia Pathway";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER024946-PA|Name=BGER024946-PA 1 Reactome: R-HSA-110320 "Translesion Synthesis by POLH" ID=BGER020598-PA|Name=BGER020598-PA 11 Reactome: R-HSA-1912408;Reactome: R-HSA-210744;Reactome: R-HSA-350054;Reactome: R-HSA-9013695;Reactome: R-HSA-2894862;Reactome: R-HSA-2173796;Reactome: R-HSA-2644606;Reactome: R-HSA-72163;Reactome: R-HSA-8941856;Reactome: R-HSA-9013508;Reactome: R-HSA-2122947 "Pre-NOTCH Transcription and Translation";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Notch-HLH transcription pathway";"NOTCH4 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"mRNA Splicing - Major Pathway";"RUNX3 regulates NOTCH signaling";"NOTCH3 Intracellular Domain Regulates Transcription";"NOTCH1 Intracellular Domain Regulates Transcription" ID=BGER007204-PA|Name=BGER007204-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER001836-PA|Name=BGER001836-PA 9 MetaCyc: PWY-7442;KEGG: 00790+3.5.4.16;MetaCyc: PWY-6983;Reactome: R-HSA-1474151;MetaCyc: PWY-5663;MetaCyc: PWY-6147;MetaCyc: PWY-6703;MetaCyc: PWY-5664;MetaCyc: PWY-7852 "Drosopterin and aurodrosopterin biosynthesis";"Folate biosynthesis";"Threo-tetrahydrobiopterin biosynthesis";"Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation";"Erythro-tetrahydrobiopterin biosynthesis I";"6-hydroxymethyl-dihydropterin diphosphate biosynthesis I";"Preq0 biosynthesis";"Erythro-tetrahydrobiopterin biosynthesis II";"6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)" ID=BGER017992-PA|Name=BGER017992-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER011515-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER016905-PA|Name=BGER016905-PA 2 KEGG: 00627+3.6.1.7;KEGG: 00620+3.6.1.7 "Aminobenzoate degradation";"Pyruvate metabolism" ID=BGER009669-PA|Name=BGER009669-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER020495-PA|Name=BGER020495-PA 5 MetaCyc: PWY-5667;MetaCyc: PWY-7817;MetaCyc: PWY-5981;KEGG: 04070+2.7.7.41;KEGG: 00564+2.7.7.41 "CDP-diacylglycerol biosynthesis I";"Type I lipoteichoic acid biosynthesis (S. aureus)";"CDP-diacylglycerol biosynthesis III";"Phosphatidylinositol signaling system";"Glycerophospholipid metabolism" ID=BGER018955-PA|Name=BGER018955-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" ID=BGER028384-PA|Name=BGER028384-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER024644-PA|Name=BGER024644-PA 3 MetaCyc: PWY-6596;KEGG: 00230+3.5.4.6;Reactome: R-HSA-74217 "Adenosine nucleotides degradation I";"Purine metabolism";"Purine salvage" ID=BGER001281-PA|Name=BGER001281-PA 15 Reactome: R-HSA-9018519;Reactome: R-HSA-8948700;Reactome: R-HSA-1912408;Reactome: R-HSA-4086398;Reactome: R-HSA-8986944;Reactome: R-HSA-9029569;Reactome: R-HSA-8943723;Reactome: R-HSA-2559580;Reactome: R-HSA-8853884;Reactome: R-HSA-8936459;Reactome: R-HSA-8934593;Reactome: R-HSA-5628897;Reactome: R-HSA-9022692;Reactome: R-HSA-2559585;Reactome: R-HSA-5687128 "Estrogen-dependent gene expression";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"Pre-NOTCH Transcription and Translation";"Ca2+ pathway";"Transcriptional Regulation by MECP2";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of PTEN mRNA translation";"Oxidative Stress Induced Senescence";"Transcriptional Regulation by VENTX";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Regulation of RUNX1 Expression and Activity";"TP53 Regulates Metabolic Genes";"Regulation of MECP2 expression and activity";"Oncogene Induced Senescence";"MAPK6/MAPK4 signaling" ID=BGER003378-PA|Name=BGER003378-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER026534-PA|Name=BGER026534-PA 1 Reactome: R-HSA-6803204 "TP53 Regulates Transcription of Genes Involved in Cytochrome C Release" ID=BGER006545-PA|Name=BGER006545-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER013204-PA|Name=BGER013204-PA 3 Reactome: R-HSA-6798695;Reactome: R-HSA-1660661;Reactome: R-HSA-9609523 "Neutrophil degranulation";"Sphingolipid de novo biosynthesis";"Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER010159-PA|Name=BGER010159-PA 8 Reactome: R-HSA-380972;Reactome: R-HSA-3371571;Reactome: R-HSA-1632852;Reactome: R-HSA-166208;Reactome: R-HSA-5628897;Reactome: R-HSA-8943724;Reactome: R-HSA-165159;Reactome: R-HSA-9639288 "Energy dependent regulation of mTOR by LKB1-AMPK";"HSF1-dependent transactivation";"Macroautophagy";"mTORC1-mediated signalling";"TP53 Regulates Metabolic Genes";"Regulation of PTEN gene transcription";"mTOR signalling";"Amino acids regulate mTORC1" ID=BGER019659-PA|Name=BGER019659-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER019019-PA|Name=BGER019019-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER000215-PA|Name=BGER000215-PA 7 KEGG: 00010+3.1.3.11;KEGG: 00030+3.1.3.11;KEGG: 00680+3.1.3.11;MetaCyc: PWY-5484;KEGG: 00710+3.1.3.11;KEGG: 00051+3.1.3.11;Reactome: R-HSA-70263 "Glycolysis / Gluconeogenesis";"Pentose phosphate pathway";"Methane metabolism";"Glycolysis II (from fructose 6-phosphate)";"Carbon fixation in photosynthetic organisms";"Fructose and mannose metabolism";"Gluconeogenesis" ID=BGER028127-PA|Name=BGER028127-PA 6 Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72689 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"Formation of a pool of free 40S subunits" ID=BGER011709-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER013012-PA|Name=BGER013012-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76061;Reactome: R-HSA-76066 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter" ID=BGER022151-PA|Name=BGER022151-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER019142-PA|Name=BGER019142-PA 3 KEGG: 00790+3.4.19.9;MetaCyc: PWY-2161B;Reactome: R-HSA-6798695 "Folate biosynthesis";"Glutamate removal from folates";"Neutrophil degranulation" ID=BGER005355-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER022538-PA|Name=BGER022538-PA 8 Reactome: R-HSA-9636467;Reactome: R-HSA-77387;Reactome: R-HSA-983712;Reactome: R-HSA-182218;Reactome: R-HSA-167590;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556 "Blockage of phagosome acidification";"Insulin receptor recycling";"Ion channel transport";"Nef Mediated CD8 Down-regulation";"Nef Mediated CD4 Down-regulation";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes" ID=BGER011139-PA|Name=BGER011139-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER009919-PA|Name=BGER009919-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER004228-PA|Name=BGER004228-PA 9 MetaCyc: PWY-7533;MetaCyc: PWY-6842;MetaCyc: PWY-4061;KEGG: 00983+2.5.1.18;Reactome: R-HSA-156590;KEGG: 00982+2.5.1.18;MetaCyc: PWY-7112;KEGG: 00480+2.5.1.18;KEGG: 00980+2.5.1.18 "Gliotoxin biosynthesis";"Glutathione-mediated detoxification II";"Glutathione-mediated detoxification I";"Drug metabolism - other enzymes";"Glutathione conjugation";"Drug metabolism - cytochrome P450";"4-hydroxy-2-nonenal detoxification";"Glutathione metabolism";"Metabolism of xenobiotics by cytochrome P450" ID=BGER008127-PA|Name=BGER008127-PA 5 Reactome: R-HSA-6782135;Reactome: R-HSA-5696400;Reactome: R-HSA-5685938;Reactome: R-HSA-5696395;Reactome: R-HSA-6783310 "Dual incision in TC-NER";"Dual Incision in GG-NER";"HDR through Single Strand Annealing (SSA)";"Formation of Incision Complex in GG-NER";"Fanconi Anemia Pathway" ID=BGER012079-PA|Name=BGER012079-PA 18 KEGG: 00592+3.1.1.4;KEGG: 00565+3.1.1.4;MetaCyc: PWY-7409;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;MetaCyc: PWY-7417;Reactome: R-HSA-1483166;Reactome: R-HSA-1482925;Reactome: R-HSA-1482922;MetaCyc: PWY-7783;Reactome: R-HSA-1482788;Reactome: R-HSA-1482801;MetaCyc: PWY-8051;KEGG: 00590+3.1.1.4;MetaCyc: PWY-8053;MetaCyc: PWY-7416;Reactome: R-HSA-1482839;KEGG: 00591+3.1.1.4 "alpha-Linolenic acid metabolism";"Ether lipid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Synthesis of PA";"Acyl chain remodelling of PG";"Acyl chain remodelling of PI";"Plasmalogen degradation";"Acyl chain remodelling of PC";"Acyl chain remodelling of PS";"Anandamide biosynthesis I";"Arachidonic acid metabolism";"Anandamide biosynthesis II";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Acyl chain remodelling of PE";"Linoleic acid metabolism" ID=BGER016327-PA|Name=BGER016327-PA 2 Reactome: R-HSA-379726;KEGG: 00970+6.1.1.15 "Mitochondrial tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" ID=BGER012289-PA|Name=BGER012289-PA 1 Reactome: R-HSA-1483101 "Synthesis of PS" ID=BGER006402-PA|Name=BGER006402-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER012793-PA|Name=BGER012793-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER019080-PA|Name=BGER019080-PA 57 Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5658442;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-6798695;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-69601;Reactome: R-HSA-382556;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178 "G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of RAS by GAPs";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Neutrophil degranulation";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"ABC-family proteins mediated transport";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1" ID=BGER018637-PA|Name=BGER018637-PA 5 Reactome: R-HSA-6811436;Reactome: R-HSA-983231;Reactome: R-HSA-6807878;Reactome: R-HSA-3371497;Reactome: R-HSA-2132295 "COPI-independent Golgi-to-ER retrograde traffic";"Factors involved in megakaryocyte development and platelet production";"COPI-mediated anterograde transport";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"MHC class II antigen presentation" ID=BGER013546-PA|Name=BGER013546-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER003976-PA|Name=BGER003976-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER021604-PA|Name=BGER021604-PA 4 KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;MetaCyc: PWY-7822;MetaCyc: PWY-6855 "Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Chitin degradation III (Serratia)";"Chitin degradation I (archaea)" ID=BGER023287-PA|Name=BGER023287-PA 8 KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-6791226 "PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER005239-PA|Name=BGER005239-PA 1 Reactome: R-HSA-880009 "Interconversion of 2-oxoglutarate and 2-hydroxyglutarate" ID=BGER019738-PA|Name=BGER019738-PA 2 Reactome: R-HSA-5620924;Reactome: R-HSA-5610787 "Intraflagellar transport";"Hedgehog 'off' state" ID=BGER011574-PA|Name=BGER011574-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER019559-PA|Name=BGER019559-PA 6 KEGG: 00260+5.4.2.11;MetaCyc: PWY-1622;KEGG: 00680+5.4.2.11;MetaCyc: PWY-8004;KEGG: 00010+5.4.2.11;MetaCyc: PWY-5484 "Glycine, serine and threonine metabolism";"Formaldehyde assimilation I (serine pathway)";"Methane metabolism";"Entner-Doudoroff pathway I";"Glycolysis / Gluconeogenesis";"Glycolysis II (from fructose 6-phosphate)" ID=BGER000398-PA|Name=BGER000398-PA 3 Reactome: R-HSA-162658;Reactome: R-HSA-6807878;Reactome: R-HSA-204005 "Golgi Cisternae Pericentriolar Stack Reorganization";"COPI-mediated anterograde transport";"COPII-mediated vesicle transport" ID=BGER029566-PA|Name=BGER029566-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012251-PA|Name=BGER012251-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER012190-PA|Name=BGER012190-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER023430-PA|Name=BGER023430-PA 1 Reactome: R-HSA-156581 "Methylation" ID=BGER021897-PA|Name=BGER021897-PA 16 Reactome: R-HSA-437239;Reactome: R-HSA-416993;Reactome: R-HSA-5099900;Reactome: R-HSA-196025;Reactome: R-HSA-164939;Reactome: R-HSA-177504;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825;Reactome: R-HSA-167590;Reactome: R-HSA-8964038;Reactome: R-HSA-182218;Reactome: R-HSA-2132295;Reactome: R-HSA-5140745;Reactome: R-HSA-3928665;Reactome: R-HSA-190873;Reactome: R-HSA-8866427 "Recycling pathway of L1";"Trafficking of GluR2-containing AMPA receptors";"WNT5A-dependent internalization of FZD4";"Formation of annular gap junctions";"Nef mediated downregulation of CD28 cell surface expression";"Retrograde neurotrophin signalling";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis";"Nef Mediated CD4 Down-regulation";"LDL clearance";"Nef Mediated CD8 Down-regulation";"MHC class II antigen presentation";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"EPH-ephrin mediated repulsion of cells";"Gap junction degradation";"VLDLR internalisation and degradation" ID=BGER025157-PA|Name=BGER025157-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER000795-PA|Name=BGER000795-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER019720-PA|Name=BGER019720-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" ID=BGER023303-PA|Name=BGER023303-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER027513-PA|Name=BGER027513-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" ID=BGER012412-PA|Name=BGER012412-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER006022-PA|Name=BGER006022-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-6807505;Reactome: R-HSA-76071 "RNA Polymerase III Abortive And Retractive Initiation";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase III Transcription Initiation From Type 3 Promoter" ID=BGER008213-PA|Name=BGER008213-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER007818-PA|Name=BGER007818-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER027614-PA|Name=BGER027614-PA 2 MetaCyc: PWY-6788;KEGG: 00500+3.2.1.4 "Cellulose degradation II (fungi)";"Starch and sucrose metabolism" ID=BGER000741-PA|Name=BGER000741-PA 12 Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-6811436;Reactome: R-HSA-68877;Reactome: R-HSA-9646399;Reactome: R-HSA-141444;Reactome: R-HSA-3371497;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-2132295 "Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"COPI-independent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Aggrephagy";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-mediated anterograde transport";"HCMV Early Events";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"MHC class II antigen presentation" ID=BGER005246-PA|Name=BGER005246-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER020924-PA|Name=BGER020924-PA 3 Reactome: R-HSA-114608;Reactome: R-HSA-8957275;Reactome: R-HSA-381426 "Platelet degranulation";"Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" ID=BGER009895-PA|Name=BGER009895-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER023780-PA|Name=BGER023780-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" ID=BGER005375-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER000919-PA|Name=BGER000919-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER028412-PA|Name=BGER028412-PA 2 Reactome: R-HSA-1433559;Reactome: R-HSA-8951664 "Regulation of KIT signaling";"Neddylation" ID=BGER003258-PA|Name=BGER003258-PA 6 Reactome: R-HSA-5632927;Reactome: R-HSA-5358565;Reactome: R-HSA-5632968;Reactome: R-HSA-6796648;Reactome: R-HSA-5358606;Reactome: R-HSA-5632928 "Defective Mismatch Repair Associated With MSH3";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Defective Mismatch Repair Associated With MSH6";"TP53 Regulates Transcription of DNA Repair Genes";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Defective Mismatch Repair Associated With MSH2" ID=BGER003924-PA|Name=BGER003924-PA 27 Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-170822;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-168276;Reactome: R-HSA-168333;Reactome: R-HSA-180746 "SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"NS1 Mediated Effects on Host Pathways";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein" ID=BGER018526-PA|Name=BGER018526-PA 1 Reactome: R-HSA-435368 "Zinc efflux and compartmentalization by the SLC30 family" ID=BGER028329-PA|Name=BGER028329-PA 1 Reactome: R-HSA-8856825 "Cargo recognition for clathrin-mediated endocytosis" ID=BGER024157-PA|Name=BGER024157-PA 2 Reactome: R-HSA-8953750;Reactome: R-HSA-8939243 "Transcriptional Regulation by E2F6";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" ID=BGER005993-PA|Name=BGER005993-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER024557-PA|Name=BGER024557-PA 4 Reactome: R-HSA-1799339;Reactome: R-HSA-446203;Reactome: R-HSA-879415;Reactome: R-HSA-6798695 "SRP-dependent cotranslational protein targeting to membrane";"Asparagine N-linked glycosylation";"Advanced glycosylation endproduct receptor signaling";"Neutrophil degranulation" ID=BGER017741-PA|Name=BGER017741-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER013184-PA|Name=BGER013184-PA 10 KEGG: 00240+2.1.1.45;KEGG: 00670+2.1.1.45;MetaCyc: PWY-7198;MetaCyc: PWY-7187;MetaCyc: PWY-7184;Reactome: R-HSA-69205;Reactome: R-HSA-499943;MetaCyc: PWY-3841;MetaCyc: PWY-7210;MetaCyc: PWY-7199 "Pyrimidine metabolism";"One carbon pool by folate";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"G1/S-Specific Transcription";"Interconversion of nucleotide di- and triphosphates";"Folate transformations II (plants)";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleosides salvage" ID=BGER019099-PA|Name=BGER019099-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" ID=BGER027246-PA|Name=BGER027246-PA 1 Reactome: R-HSA-8856828 "Clathrin-mediated endocytosis" ID=BGER018002-PA|Name=BGER018002-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER004301-PA|Name=BGER004301-PA 4 KEGG: 00260+1.2.1.8+1.1.99.1;Reactome: R-HSA-6798163;MetaCyc: PWY-3722;MetaCyc: PWY-7494 "Glycine, serine and threonine metabolism";"Choline catabolism";"Glycine betaine biosynthesis II (Gram-positive bacteria)";"Choline degradation IV" ID=BGER003130-PA|Name=BGER003130-PA 2 MetaCyc: PWY-6981;KEGG: 00520+2.4.1.16 "Chitin biosynthesis";"Amino sugar and nucleotide sugar metabolism" ID=BGER027651-PA|Name=BGER027651-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER025879-PA|Name=BGER025879-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012295-PA|Name=BGER012295-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER020299-PA|Name=BGER020299-PA 1 KEGG: 00010+5.1.3.15 "Glycolysis / Gluconeogenesis" ID=BGER020975-PA|Name=BGER020975-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER014596-PA|Name=BGER014596-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER003652-PA|Name=BGER003652-PA 2 Reactome: R-HSA-70263;Reactome: R-HSA-70171 "Gluconeogenesis";"Glycolysis" ID=BGER025286-PA|Name=BGER025286-PA 2 Reactome: R-HSA-418990;Reactome: R-HSA-5218920 "Adherens junctions interactions";"VEGFR2 mediated vascular permeability" ID=BGER003914-PA|Name=BGER003914-PA 4 Reactome: R-HSA-3371497;Reactome: R-HSA-8939211;Reactome: R-HSA-3371568;Reactome: R-HSA-9018519 "HSP90 chaperone cycle for steroid hormone receptors (SHR)";"ESR-mediated signaling";"Attenuation phase";"Estrogen-dependent gene expression" ID=BGER014652-PA|Name=BGER014652-PA 5 Reactome: R-HSA-5689880;Reactome: R-HSA-4641257;Reactome: R-HSA-8948751;MetaCyc: PWY-7511;Reactome: R-HSA-201681 "Ub-specific processing proteases";"Degradation of AXIN";"Regulation of PTEN stability and activity";"Protein ubiquitination";"TCF dependent signaling in response to WNT" ID=BGER019694-PA|Name=BGER019694-PA 7 KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER002657-PA|Name=BGER002657-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER000956-PA|Name=BGER000956-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" ID=BGER025378-PA|Name=BGER025378-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER008396-PA|Name=BGER008396-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" ID=BGER016287-PA|Name=BGER016287-PA 3 Reactome: R-HSA-1614558;Reactome: R-HSA-1614603;Reactome: R-HSA-2408508 "Degradation of cysteine and homocysteine";"Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se" ID=BGER020739-PA|Name=BGER020739-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER015733-PA|Name=BGER015733-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER027231-PA|Name=BGER027231-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER021908-PA|Name=BGER021908-PA 4 Reactome: R-HSA-1170546;Reactome: R-HSA-982772;Reactome: R-HSA-983231;Reactome: R-HSA-2586552 "Prolactin receptor signaling";"Growth hormone receptor signaling";"Factors involved in megakaryocyte development and platelet production";"Signaling by Leptin" ID=BGER026520-PA|Name=BGER026520-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER020247-PA|Name=BGER020247-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER029052-PA|Name=BGER029052-PA 1 Reactome: R-HSA-212436 "Generic Transcription Pathway" ID=BGER026616-PA|Name=BGER026616-PA 3 MetaCyc: PWY-4361;Reactome: R-HSA-1237112;KEGG: 00270+1.13.11.54 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Methionine salvage pathway";"Cysteine and methionine metabolism" ID=BGER022614-PA|Name=BGER022614-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" ID=BGER023665-PA|Name=BGER023665-PA 4 MetaCyc: PWY-8051;KEGG: 00592+3.1.1.32;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.32 "Anandamide biosynthesis I";"alpha-Linolenic acid metabolism";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism" ID=BGER000657-PA|Name=BGER000657-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER002331-PA|Name=BGER002331-PA 1 Reactome: R-HSA-5625900 "RHO GTPases activate CIT" ID=BGER008737-PA|Name=BGER008737-PA 5 Reactome: R-HSA-5687128;KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;Reactome: R-HSA-176407;KEGG: 04660+3.1.3.16 "MAPK6/MAPK4 signaling";"Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"T cell receptor signaling pathway" ID=BGER018950-PA|Name=BGER018950-PA 6 KEGG: 00564+2.7.1.107;KEGG: 00561+2.7.1.107;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;Reactome: R-HSA-114508;MetaCyc: PWY-7817 "Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Effects of PIP2 hydrolysis";"Type I lipoteichoic acid biosynthesis (S. aureus)" ID=BGER016842-PA|Name=BGER016842-PA 7 KEGG: 00310+2.3.1.61;Reactome: R-HSA-71064;Reactome: R-HSA-389661;MetaCyc: PWY-5084;KEGG: 00020+2.3.1.61;KEGG: 00380+2.3.1.61;Reactome: R-HSA-71403 "Lysine degradation";"Lysine catabolism";"Glyoxylate metabolism and glycine degradation";"2-oxoglutarate decarboxylation to succinyl-CoA";"Citrate cycle (TCA cycle)";"Tryptophan metabolism";"Citric acid cycle (TCA cycle)" ID=BGER025692-PA|Name=BGER025692-PA 1 Reactome: R-HSA-70350 "Fructose catabolism" ID=BGER002472-PA|Name=BGER002472-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER021561-PA|Name=BGER021561-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER017330-PA|Name=BGER017330-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER026524-PA|Name=BGER026524-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER006458-PA|Name=BGER006458-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER022466-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER025922-PA|Name=BGER025922-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER029290-PA|Name=BGER029290-PA 7 Reactome: R-HSA-1483191;MetaCyc: PWY-7818;Reactome: R-HSA-1483213;MetaCyc: PWY-7782;MetaCyc: PWY-7886;KEGG: 00564+2.7.1.32+2.7.1.82;MetaCyc: PWY-3385 "Synthesis of PC";"Type IV lipoteichoic acid biosynthesis (S. pneumoniae)";"Synthesis of PE";"Plasmalogen biosynthesis";"Cell-surface glycoconjugate-linked phosphocholine biosynthesis";"Glycerophospholipid metabolism";"Choline biosynthesis I" ID=BGER022020-PA|Name=BGER022020-PA 2 Reactome: R-HSA-5205685;Reactome: R-HSA-1268020 "Pink/Parkin Mediated Mitophagy";"Mitochondrial protein import" ID=BGER005633-PA|Name=BGER005633-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-975957 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER014315-PA|Name=BGER014315-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER003138-PA|Name=BGER003138-PA 3 Reactome: R-HSA-373080;Reactome: R-HSA-4086400;Reactome: R-HSA-4608870 "Class B/2 (Secretin family receptors)";"PCP/CE pathway";"Asymmetric localization of PCP proteins" ID=BGER005304-PA|Name=BGER005304-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER020946-PA|Name=BGER020946-PA 2 Reactome: R-HSA-917729;Reactome: R-HSA-9610379 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events" ID=BGER025753-PA|Name=BGER025753-PA 5 Reactome: R-HSA-389661;KEGG: 00785+6.3.1.20;MetaCyc: PWY-6987;KEGG: 00785+2.3.1.181;MetaCyc: PWY-7382 "Glyoxylate metabolism and glycine degradation";"Lipoic acid metabolism";"Lipoate biosynthesis and incorporation III (Bacillus)";"Lipoic acid metabolism";"Lipoate biosynthesis and incorporation IV (yeast)" ID=BGER029044-PA|Name=BGER029044-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-8951664;Reactome: R-HSA-6781823;Reactome: R-HSA-8856825 "DNA Damage Recognition in GG-NER";"Neddylation";"Formation of TC-NER Pre-Incision Complex";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER003802-PA|Name=BGER003802-PA 3 MetaCyc: PWY-3961;KEGG: 00770+2.7.1.33;Reactome: R-HSA-196783 "Phosphopantothenate biosynthesis II";"Pantothenate and CoA biosynthesis";"Coenzyme A biosynthesis" ID=BGER023233-PA|Name=BGER023233-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER011240-PA|Name=BGER011240-PA 5 Reactome: R-HSA-75105;Reactome: R-HSA-9029558;Reactome: R-HSA-199220;Reactome: R-HSA-2426168;Reactome: R-HSA-163765 "Fatty acyl-CoA biosynthesis";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Vitamin B5 (pantothenate) metabolism";"Activation of gene expression by SREBF (SREBP)";"ChREBP activates metabolic gene expression" ID=BGER022642-PA|Name=BGER022642-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER007198-PA|Name=BGER007198-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER023472-PA|Name=BGER023472-PA 21 MetaCyc: PWY-7176;MetaCyc: PWY-6545;MetaCyc: PWY-7221;MetaCyc: PWY-7184;MetaCyc: PWY-7222;Reactome: R-HSA-499943;MetaCyc: PWY-7226;KEGG: 00230+2.7.4.6+2.7.4.3;MetaCyc: PWY-7220;MetaCyc: PWY-7198;MetaCyc: PWY-7205;MetaCyc: PWY-7210;MetaCyc: PWY-7227;KEGG: 00240+2.7.4.6;KEGG: 00730+2.7.4.3;MetaCyc: PWY-7219;KEGG: 00230+2.7.4.3;MetaCyc: PWY-7187;MetaCyc: PWY-7197;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7224 "UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine ribonucleotides de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Interconversion of nucleotide di- and triphosphates";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Purine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"CMP phosphorylation";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Adenosine deoxyribonucleotides de novo biosynthesis";"Pyrimidine metabolism";"Thiamine metabolism";"Adenosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotide phosphorylation";"Drug metabolism - other enzymes";"Purine deoxyribonucleosides salvage" ID=BGER008624-PA|Name=BGER008624-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER019152-PA|Name=BGER019152-PA 5 Reactome: R-HSA-5687128;KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;Reactome: R-HSA-176407 "MAPK6/MAPK4 signaling";"Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase" ID=BGER024805-PA|Name=BGER024805-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Wax esters biosynthesis I";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER014617-PA|Name=BGER014617-PA 3 Reactome: R-HSA-75955;Reactome: R-HSA-112382;Reactome: R-HSA-674695 "RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Pre-transcription Events" ID=BGER004519-PA|Name=BGER004519-PA 1 Reactome: R-HSA-2470946 "Cohesin Loading onto Chromatin" ID=BGER010234-PA|Name=BGER010234-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" ID=BGER027579-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER012576-PA|Name=BGER012576-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER025666-PA|Name=BGER025666-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER022856-PA|Name=BGER022856-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER010044-PA|Name=BGER010044-PA 8 Reactome: R-HSA-8943724;Reactome: R-HSA-212300;Reactome: R-HSA-2559580;Reactome: R-HSA-9609690;Reactome: R-HSA-8953750;Reactome: R-HSA-4551638;Reactome: R-HSA-3214841;Reactome: R-HSA-5617472 "Regulation of PTEN gene transcription";"PRC2 methylates histones and DNA";"Oxidative Stress Induced Senescence";"HCMV Early Events";"Transcriptional Regulation by E2F6";"SUMOylation of chromatin organization proteins";"PKMTs methylate histone lysines";"Activation of anterior HOX genes in hindbrain development during early embryogenesis" ID=BGER010812-PA|Name=BGER010812-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER027712-PA|Name=BGER027712-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER017282-PA|Name=BGER017282-PA 1 Reactome: R-HSA-5627083 "RHO GTPases regulate CFTR trafficking" ID=BGER023595-PA|Name=BGER023595-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER003639-PA|Name=BGER003639-PA 3 Reactome: R-HSA-5689880;Reactome: R-HSA-110314;Reactome: R-HSA-6783310 "Ub-specific processing proteases";"Recognition of DNA damage by PCNA-containing replication complex";"Fanconi Anemia Pathway" ID=BGER014133-PA|Name=BGER014133-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER023391-PA|Name=BGER023391-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER014655-PA|Name=BGER014655-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER019507-PA|Name=BGER019507-PA 3 Reactome: R-HSA-2132295;Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "MHC class II antigen presentation";"Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER025894-PA|Name=BGER025894-PA 14 MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-5080;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-7035 "Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis" ID=BGER002320-PA|Name=BGER002320-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER013841-PA|Name=BGER013841-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER017586-PA|Name=BGER017586-PA 3 Reactome: R-HSA-3322077;MetaCyc: PWY-5067;KEGG: 00500+2.4.1.11 "Glycogen synthesis";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism" ID=BGER002722-PA|Name=BGER002722-PA 8 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-428540;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"Human papillomavirus infection";"Human cytomegalovirus infection";"Activation of RAC1";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway" ID=BGER023087-PA|Name=BGER023087-PA 1 Reactome: R-HSA-388844 "Receptor-type tyrosine-protein phosphatases" ID=BGER009836-PA|Name=BGER009836-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER029335-PA|Name=BGER029335-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER025772-PA|Name=BGER025772-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER017746-PA|Name=BGER017746-PA 2 KEGG: 00500+3.2.1.4;MetaCyc: PWY-6788 "Starch and sucrose metabolism";"Cellulose degradation II (fungi)" ID=BGER005583-PA|Name=BGER005583-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-8866654 "Protein ubiquitination";"E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER010699-PA|Name=BGER010699-PA 7 Reactome: R-HSA-1660662;MetaCyc: PWY-7838;MetaCyc: PWY-5129;MetaCyc: PWY-7841;KEGG: 00600+2.4.1.80;MetaCyc: PWY-7836;MetaCyc: PWY-7839 "Glycosphingolipid metabolism";"Globo-series glycosphingolipids biosynthesis";"Sphingolipid biosynthesis (plants)";"Neolacto-series glycosphingolipids biosynthesis";"Sphingolipid metabolism";"Ganglio-series glycosphingolipids biosynthesis";"Lacto-series glycosphingolipids biosynthesis" ID=BGER011088-PA|Name=BGER011088-PA 5 Reactome: R-HSA-1482839;Reactome: R-HSA-1483115;Reactome: R-HSA-1482788;Reactome: R-HSA-1482922;Reactome: R-HSA-1482801 "Acyl chain remodelling of PE";"Hydrolysis of LPC";"Acyl chain remodelling of PC";"Acyl chain remodelling of PI";"Acyl chain remodelling of PS" ID=BGER014267-PA|Name=BGER014267-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER002570-PA|Name=BGER002570-PA 2 Reactome: R-HSA-8964539;Reactome: R-HSA-2151201 "Glutamate and glutamine metabolism";"Transcriptional activation of mitochondrial biogenesis" ID=BGER003069-PA|Name=BGER003069-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER018091-PA|Name=BGER018091-PA 1 Reactome: R-HSA-73943 "Reversal of alkylation damage by DNA dioxygenases" ID=BGER021038-PA|Name=BGER021038-PA 11 MetaCyc: PWY-7586;MetaCyc: PWY-7456;Reactome: R-HSA-4043916;KEGG: 00520+5.3.1.8;MetaCyc: PWY-5659;Reactome: R-HSA-446205;MetaCyc: PWY-882;MetaCyc: PWY-3861;KEGG: 00051+5.3.1.8;MetaCyc: PWY-3881;MetaCyc: PWY-6992 "Beta-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation";"Beta-(1,4)-mannan degradation";"Defective MPI causes MPI-CDG (CDG-1b)";"Amino sugar and nucleotide sugar metabolism";"GDP-mannose biosynthesis";"Synthesis of GDP-mannose";"L-ascorbate biosynthesis I (L-galactose pathway)";"Mannitol degradation II";"Fructose and mannose metabolism";"Mannitol biosynthesis";"1,5-anhydrofructose degradation" ID=BGER008906-PA|Name=BGER008906-PA 5 Reactome: R-HSA-2132295;Reactome: R-HSA-1660662;Reactome: R-HSA-4341670;Reactome: R-HSA-4085001;Reactome: R-HSA-6798695 "MHC class II antigen presentation";"Glycosphingolipid metabolism";"Defective NEU1 causes sialidosis";"Sialic acid metabolism";"Neutrophil degranulation" ID=BGER015346-PA|Name=BGER015346-PA 13 Reactome: R-HSA-8964038;Reactome: R-HSA-167590;Reactome: R-HSA-5099900;Reactome: R-HSA-8856825;Reactome: R-HSA-8856828;Reactome: R-HSA-416993;Reactome: R-HSA-177504;Reactome: R-HSA-437239;Reactome: R-HSA-3928665;Reactome: R-HSA-5140745;Reactome: R-HSA-8866427;Reactome: R-HSA-2132295;Reactome: R-HSA-182218 "LDL clearance";"Nef Mediated CD4 Down-regulation";"WNT5A-dependent internalization of FZD4";"Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis";"Trafficking of GluR2-containing AMPA receptors";"Retrograde neurotrophin signalling";"Recycling pathway of L1";"EPH-ephrin mediated repulsion of cells";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"VLDLR internalisation and degradation";"MHC class II antigen presentation";"Nef Mediated CD8 Down-regulation" ID=BGER008834-PA|Name=BGER008834-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER008888-PA|Name=BGER008888-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER002945-PA|Name=BGER002945-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER027640-PA|Name=BGER027640-PA 6 KEGG: 00630+1.11.1.6;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695 "Glyoxylate and dicarboxylate metabolism";"Tryptophan metabolism";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation" ID=BGER024540-PA|Name=BGER024540-PA 10 KEGG: 05165+2.7.1.153;KEGG: 05170+2.7.1.153;Reactome: R-HSA-1660499;KEGG: 04150+2.7.1.153;KEGG: 04151+2.7.1.153;MetaCyc: PWY-6352;KEGG: 00562+2.7.1.153;KEGG: 05163+2.7.1.153;KEGG: 04070+2.7.1.153;Reactome: R-HSA-9027276 "Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"Synthesis of PIPs at the plasma membrane";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"3-phosphoinositide biosynthesis";"Inositol phosphate metabolism";"Human cytomegalovirus infection";"Phosphatidylinositol signaling system";"Erythropoietin activates Phosphoinositide-3-kinase (PI3K)" ID=BGER020723-PA|Name=BGER020723-PA 1 Reactome: R-HSA-1296052 "Ca2+ activated K+ channels" ID=BGER007128-PA|Name=BGER007128-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER025887-PA|Name=BGER025887-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER006901-PA|Name=BGER006901-PA 4 Reactome: R-HSA-9031525;Reactome: R-HSA-983168;MetaCyc: PWY-7511;Reactome: R-HSA-8866427 "NR1H2 & NR1H3 regulate gene expression to limit cholesterol uptake";"Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination";"VLDLR internalisation and degradation" ID=BGER019266-PA|Name=BGER019266-PA 8 KEGG: 00500+2.7.1.1;KEGG: 00010+2.7.1.1;Reactome: R-HSA-70171;KEGG: 00051+2.7.1.1;KEGG: 00052+2.7.1.1;KEGG: 00520+2.7.1.1;KEGG: 00521+2.7.1.1;KEGG: 00524+2.7.1.1 "Starch and sucrose metabolism";"Glycolysis / Gluconeogenesis";"Glycolysis";"Fructose and mannose metabolism";"Galactose metabolism";"Amino sugar and nucleotide sugar metabolism";"Streptomycin biosynthesis";"Neomycin, kanamycin and gentamicin biosynthesis" ID=BGER001221-PA|Name=BGER001221-PA 1 Reactome: R-HSA-2129379 "Molecules associated with elastic fibres" ID=BGER013478-PA|Name=BGER013478-PA 1 KEGG: 00531+3.2.1.35 "Glycosaminoglycan degradation" ID=BGER012846-PA|Name=BGER012846-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER005573-PA|Name=BGER005573-PA 5 MetaCyc: PWY-8010;Reactome: R-HSA-977347;KEGG: 00260+1.1.1.95;KEGG: 00680+1.1.1.95;KEGG: 00270+1.1.1.95 "L-cysteine biosynthesis IX (Trichomonas vaginalis)";"Serine biosynthesis";"Glycine, serine and threonine metabolism";"Methane metabolism";"Cysteine and methionine metabolism" ID=BGER000225-PA|Name=BGER000225-PA 4 Reactome: R-HSA-2122947;Reactome: R-HSA-3769402;Reactome: R-HSA-201722;Reactome: R-HSA-4641265 "NOTCH1 Intracellular Domain Regulates Transcription";"Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex";"Repression of WNT target genes" ID=BGER014241-PA|Name=BGER014241-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER005320-PA|Name=BGER005320-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER012553-PA|Name=BGER012553-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER012189-PA|Name=BGER012189-PA 2 Reactome: R-HSA-383280;Reactome: R-HSA-983231 "Nuclear Receptor transcription pathway";"Factors involved in megakaryocyte development and platelet production" ID=BGER005184-PA|Name=BGER005184-PA 3 Reactome: R-HSA-2024096;KEGG: 00531+3.2.1.50;Reactome: R-HSA-2206282 "HS-GAG degradation";"Glycosaminoglycan degradation";"MPS IIIB - Sanfilippo syndrome B" ID=BGER016025-PA|Name=BGER016025-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER019604-PA|Name=BGER019604-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" ID=BGER000989-PA|Name=BGER000989-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER016199-PA|Name=BGER016199-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-936837 "Neutrophil degranulation";"Ion transport by P-type ATPases" ID=BGER011508-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER008846-PA|Name=BGER008846-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER027552-PA|Name=BGER027552-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER002822-PA|Name=BGER002822-PA 9 MetaCyc: PWY-5789;KEGG: 00910+4.2.1.1;MetaCyc: PWY-7115;Reactome: R-HSA-1475029;MetaCyc: PWY-7117;MetaCyc: PWY-6142;MetaCyc: PWY-5744;MetaCyc: PWY-241;MetaCyc: PWY-5743 "3-hydroxypropanoate/4-hydroxybutanate cycle";"Nitrogen metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Reversible hydration of carbon dioxide";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glyoxylate assimilation";"C4 photosynthetic carbon assimilation cycle, NADP-ME type";"3-hydroxypropanoate cycle" ID=BGER026607-PA|Name=BGER026607-PA 7 Reactome: R-HSA-6804114;Reactome: R-HSA-2173796;Reactome: R-HSA-1538133;Reactome: R-HSA-1362277;Reactome: R-HSA-69231;Reactome: R-HSA-69205;Reactome: R-HSA-1362300 "TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"G0 and Early G1";"Transcription of E2F targets under negative control by DREAM complex";"Cyclin D associated events in G1";"G1/S-Specific Transcription";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1" ID=BGER028190-PA|Name=BGER028190-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" ID=BGER009340-PA|Name=BGER009340-PA 5 MetaCyc: PWY-7511;Reactome: R-HSA-5358346;Reactome: R-HSA-381038;Reactome: R-HSA-5362768;Reactome: R-HSA-901032 "Protein ubiquitination";"Hedgehog ligand biogenesis";"XBP1(S) activates chaperone genes";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"ER Quality Control Compartment (ERQC)" ID=BGER010574-PA|Name=BGER010574-PA 2 Reactome: R-HSA-4090294;Reactome: R-HSA-383280 "SUMOylation of intracellular receptors";"Nuclear Receptor transcription pathway" ID=BGER028627-PA|Name=BGER028627-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER018053-PA|Name=BGER018053-PA 13 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-416476;Reactome: R-HSA-5687128;Reactome: R-HSA-194840;Reactome: R-HSA-193648;Reactome: R-HSA-416482;KEGG: 04151+2.7.11.1;Reactome: R-HSA-3928662;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"G alpha (q) signalling events";"MAPK6/MAPK4 signaling";"Rho GTPase cycle";"NRAGE signals death through JNK";"G alpha (12/13) signalling events";"PI3K-Akt signaling pathway";"EPHB-mediated forward signaling";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER020067-PA|Name=BGER020067-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-72187;Reactome: R-HSA-73856 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination" ID=BGER018546-PA|Name=BGER018546-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER012976-PA|Name=BGER012976-PA 2 KEGG: 00290+4.3.1.19;KEGG: 00260+4.3.1.19 "Valine, leucine and isoleucine biosynthesis";"Glycine, serine and threonine metabolism" ID=BGER015284-PA|Name=BGER015284-PA 1 Reactome: R-HSA-390648 "Muscarinic acetylcholine receptors" ID=BGER024892-PA|Name=BGER024892-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" ID=BGER013703-PA|Name=BGER013703-PA 6 Reactome: R-HSA-5358606;Reactome: R-HSA-6796648;Reactome: R-HSA-5632987;Reactome: R-HSA-5545483;Reactome: R-HSA-5358565;Reactome: R-HSA-912446 "Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"TP53 Regulates Transcription of DNA Repair Genes";"Defective Mismatch Repair Associated With PMS2";"Defective Mismatch Repair Associated With MLH1";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Meiotic recombination" ID=BGER029778-PA|Name=BGER029778-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER009684-PA|Name=BGER009684-PA 6 KEGG: 04660+3.1.3.16;Reactome: R-HSA-5675221;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16;Reactome: R-HSA-8939211;Reactome: R-HSA-5693565 "T cell receptor signaling pathway";"Negative regulation of MAPK pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation";"ESR-mediated signaling";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" ID=BGER017590-PA|Name=BGER017590-PA 1 Reactome: R-HSA-6787450 "tRNA modification in the mitochondrion" ID=BGER018319-PA|Name=BGER018319-PA 4 MetaCyc: PWY-7494;MetaCyc: PWY-3722;KEGG: 00260+1.2.1.8+1.1.99.1;Reactome: R-HSA-6798163 "Choline degradation IV";"Glycine betaine biosynthesis II (Gram-positive bacteria)";"Glycine, serine and threonine metabolism";"Choline catabolism" ID=BGER022959-PA|Name=BGER022959-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER008133-PA|Name=BGER008133-PA 2 Reactome: R-HSA-5633231;Reactome: R-HSA-446193 "Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" ID=BGER007122-PA|Name=BGER007122-PA 1 Reactome: R-HSA-2028269 "Signaling by Hippo" ID=BGER024927-PA|Name=BGER024927-PA 9 Reactome: R-HSA-5693607;Reactome: R-HSA-5693579;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554 "Processing of DNA double-strand break ends";"Homologous DNA Pairing and Strand Exchange";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" ID=BGER009817-PA|Name=BGER009817-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER016224-PA|Name=BGER016224-PA 1 Reactome: R-HSA-5624138 "Trafficking of myristoylated proteins to the cilium" ID=BGER012817-PA|Name=BGER012817-PA 2 Reactome: R-HSA-8949664;Reactome: R-HSA-8949215 "Processing of SMDT1";"Mitochondrial calcium ion transport" ID=BGER010436-PA|Name=BGER010436-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" ID=BGER019722-PA|Name=BGER019722-PA 4 Reactome: R-HSA-112311;KEGG: 00564+3.1.1.7;Reactome: R-HSA-422085;Reactome: R-HSA-1483191 "Neurotransmitter clearance";"Glycerophospholipid metabolism";"Synthesis, secretion, and deacylation of Ghrelin";"Synthesis of PC" ID=BGER018022-PA|Name=BGER018022-PA 2 KEGG: 00260+2.1.2.10;KEGG: 00670+2.1.2.10 "Glycine, serine and threonine metabolism";"One carbon pool by folate" ID=BGER021040-PA|Name=BGER021040-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER023317-PA|Name=BGER023317-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER029359-PA|Name=BGER029359-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER004114-PA|Name=BGER004114-PA 5 MetaCyc: PWY-6344;MetaCyc: PWY-4981;Reactome: R-HSA-8964539;KEGG: 00330+1.5.1.2;MetaCyc: PWY-3341 "L-ornithine degradation II (Stickland reaction)";"L-proline biosynthesis II (from arginine)";"Glutamate and glutamine metabolism";"Arginine and proline metabolism";"L-proline biosynthesis III (from L-ornithine)" ID=BGER029183-PA|Name=BGER029183-PA 6 KEGG: 00020+4.2.1.3;Reactome: R-HSA-1268020;KEGG: 00720+4.2.1.3;KEGG: 00290+4.2.1.33;KEGG: 00630+4.2.1.3;Reactome: R-HSA-71403 "Citrate cycle (TCA cycle)";"Mitochondrial protein import";"Carbon fixation pathways in prokaryotes";"Valine, leucine and isoleucine biosynthesis";"Glyoxylate and dicarboxylate metabolism";"Citric acid cycle (TCA cycle)" ID=BGER003878-PA|Name=BGER003878-PA 1 Reactome: R-HSA-2559584 "Formation of Senescence-Associated Heterochromatin Foci (SAHF)" ID=BGER009352-PA|Name=BGER009352-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" ID=BGER018307-PA|Name=BGER018307-PA 3 Reactome: R-HSA-381038;Reactome: R-HSA-8957275;Reactome: R-HSA-381426 "XBP1(S) activates chaperone genes";"Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" ID=BGER002196-PA|Name=BGER002196-PA 1 Reactome: R-HSA-427359 "SIRT1 negatively regulates rRNA expression" ID=BGER000358-PA|Name=BGER000358-PA 1 Reactome: R-HSA-499943 "Interconversion of nucleotide di- and triphosphates" ID=BGER018788-PA|Name=BGER018788-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER011286-PA|Name=BGER011286-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER012467-PA|Name=BGER012467-PA 3 KEGG: 00970+6.1.1.19;Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" ID=BGER020164-PA|Name=BGER020164-PA 7 Reactome: R-HSA-606279;Reactome: R-HSA-5689603;Reactome: R-HSA-201722;Reactome: R-HSA-3214847;Reactome: R-HSA-5696394;Reactome: R-HSA-171319;Reactome: R-HSA-5689880 "Deposition of new CENPA-containing nucleosomes at the centromere";"UCH proteinases";"Formation of the beta-catenin:TCF transactivating complex";"HATs acetylate histones";"DNA Damage Recognition in GG-NER";"Telomere Extension By Telomerase";"Ub-specific processing proteases" ID=BGER029324-PA|Name=BGER029324-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER007608-PA|Name=BGER007608-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER024857-PA|Name=BGER024857-PA 1 Reactome: R-HSA-419771 "Opsins" ID=BGER007469-PA|Name=BGER007469-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER008037-PA|Name=BGER008037-PA 1 Reactome: R-HSA-5658442 "Regulation of RAS by GAPs" ID=BGER029755-PA|Name=BGER029755-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing" ID=BGER014349-PA|Name=BGER014349-PA 2 Reactome: R-HSA-195253;Reactome: R-HSA-5689896 "Degradation of beta-catenin by the destruction complex";"Ovarian tumor domain proteases" ID=BGER026486-PA|Name=BGER026486-PA 8 KEGG: 00051+5.3.1.6;Reactome: R-HSA-5659996;KEGG: 00030+5.3.1.6;Reactome: R-HSA-6791461;KEGG: 00710+5.3.1.6;MetaCyc: PWY-5723;Reactome: R-HSA-71336;MetaCyc: PWY-1861 "Fructose and mannose metabolism";"RPIA deficiency: failed conversion of R5P to RU5P";"Pentose phosphate pathway";"RPIA deficiency: failed conversion of RU5P to R5P";"Carbon fixation in photosynthetic organisms";"Rubisco shunt";"Pentose phosphate pathway";"Formaldehyde assimilation II (assimilatory RuMP Cycle)" ID=BGER006530-PA|Name=BGER006530-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER003408-PA|Name=BGER003408-PA 7 MetaCyc: PWY-7219;MetaCyc: PWY-7176;KEGG: 00230+2.7.4.3;KEGG: 00983+2.7.4.14;KEGG: 00240+2.7.4.14;Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3 "Adenosine ribonucleotides de novo biosynthesis";"UTP and CTP de novo biosynthesis";"Purine metabolism";"Drug metabolism - other enzymes";"Pyrimidine metabolism";"Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism" ID=BGER005160-PA|Name=BGER005160-PA 3 MetaCyc: PWY-6367;KEGG: 04070+3.1.3.78;MetaCyc: PWY-6368 "D-myo-inositol-5-phosphate metabolism";"Phosphatidylinositol signaling system";"3-phosphoinositide degradation" ID=BGER010019-PA|Name=BGER010019-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER015960-PA|Name=BGER015960-PA 9 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-6782315;KEGG: 05163+2.7.11.1;Reactome: R-HSA-6804756;KEGG: 05165+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"tRNA modification in the nucleus and cytosol";"Human cytomegalovirus infection";"Regulation of TP53 Activity through Phosphorylation";"Human papillomavirus infection" ID=BGER005618-PA|Name=BGER005618-PA 3 Reactome: R-HSA-72165;Reactome: R-HSA-72163;Reactome: R-HSA-191859 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway";"snRNP Assembly" ID=BGER017839-PA|Name=BGER017839-PA 3 Reactome: R-HSA-9018519;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Estrogen-dependent gene expression";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER012520-PA|Name=BGER012520-PA 3 Reactome: R-HSA-3000157;Reactome: R-HSA-3000171;Reactome: R-HSA-8874081 "Laminin interactions";"Non-integrin membrane-ECM interactions";"MET activates PTK2 signaling" ID=BGER024127-PA|Name=BGER024127-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER022250-PA|Name=BGER022250-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER015271-PA|Name=BGER015271-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER023351-PA|Name=BGER023351-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER011635-PA|Name=BGER011635-PA 1 Reactome: R-HSA-200425 "Carnitine metabolism" ID=BGER004181-PA|Name=BGER004181-PA 7 Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-4615885;Reactome: R-HSA-68877;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220 "Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"SUMOylation of DNA replication proteins";"Mitotic Prometaphase";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins" ID=BGER014927-PA|Name=BGER014927-PA 2 Reactome: R-HSA-416993;Reactome: R-HSA-202733 "Trafficking of GluR2-containing AMPA receptors";"Cell surface interactions at the vascular wall" ID=BGER015065-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER007677-PA|Name=BGER007677-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER024219-PA|Name=BGER024219-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER019472-PA|Name=BGER019472-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER010191-PA|Name=Epidermal 11 Reactome: R-HSA-6785631;Reactome: R-HSA-5673001;Reactome: R-HSA-8847993;Reactome: R-HSA-1963642;Reactome: R-HSA-9664565;Reactome: R-HSA-1250196;Reactome: R-HSA-1257604;Reactome: R-HSA-1227986;Reactome: R-HSA-6811558;Reactome: R-HSA-2219530;Reactome: R-HSA-8863795 "ERBB2 Regulates Cell Motility";"RAF/MAP kinase cascade";"ERBB2 Activates PTK6 Signaling";"PI3K events in ERBB2 signaling";"Signaling by ERBB2 KD Mutants";"SHC1 events in ERBB2 signaling";"PIP3 activates AKT signaling";"Signaling by ERBB2";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Constitutive Signaling by Aberrant PI3K in Cancer";"Downregulation of ERBB2 signaling" ID=BGER022544-PA|Name=BGER022544-PA 14 MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-6433;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041 "Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Hydroxylated fatty acid biosynthesis (plants)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis" ID=BGER008150-PA|Name=BGER008150-PA 6 KEGG: 00670+2.1.2.3;Reactome: R-HSA-73817;MetaCyc: PWY-7234;MetaCyc: PWY-6124;MetaCyc: PWY-6123;KEGG: 00230+3.5.4.10+2.1.2.3 "One carbon pool by folate";"Purine ribonucleoside monophosphate biosynthesis";"Inosine-5'-phosphate biosynthesis III";"Inosine-5'-phosphate biosynthesis II";"Inosine-5'-phosphate biosynthesis I";"Purine metabolism" ID=BGER025600-PA|Name=BGER025600-PA 9 Reactome: R-HSA-3928662;Reactome: R-HSA-5673001;Reactome: R-HSA-438066;Reactome: R-HSA-9609736;Reactome: R-HSA-9620244;Reactome: R-HSA-442982;Reactome: R-HSA-9617324;Reactome: R-HSA-6794361;Reactome: R-HSA-8849932 "EPHB-mediated forward signaling";"RAF/MAP kinase cascade";"Unblocking of NMDA receptors, glutamate binding and activation";"Assembly and cell surface presentation of NMDA receptors";"Long-term potentiation";"Ras activation upon Ca2+ influx through NMDA receptor";"Negative regulation of NMDA receptor-mediated neuronal transmission";"Neurexins and neuroligins";"Synaptic adhesion-like molecules" ID=BGER013677-PA|Name=BGER013677-PA 2 Reactome: R-HSA-2206307;Reactome: R-HSA-2024096 "MPS IIIA - Sanfilippo syndrome A";"HS-GAG degradation" ID=BGER007321-PA|Name=BGER007321-PA 1 Reactome: R-HSA-380320 "Recruitment of NuMA to mitotic centrosomes" ID=BGER001089-PA|Name=BGER001089-PA 26 Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-389960;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-5626467;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-8852276;Reactome: R-HSA-190861;Reactome: R-HSA-389977;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878 "Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Formation of tubulin folding intermediates by CCT/TriC";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"RHO GTPases activate IQGAPs";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Gap junction assembly";"Post-chaperonin tubulin folding pathway";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport" ID=BGER008674-PA|Name=BGER008674-PA 1 Reactome: R-HSA-606279 "Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER011846-PA|Name=BGER011846-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012125-PA|Name=BGER012125-PA 8 KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-975957;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1 "PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Human papillomavirus infection";"Human cytomegalovirus infection";"Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway" ID=BGER029295-PA|Name=BGER029295-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER010029-PA|Name=BGER010029-PA 13 KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822;Reactome: R-HSA-1660662;MetaCyc: PWY-6902;KEGG: 00513+3.2.1.52;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00511+3.2.1.52;KEGG: 00603+3.2.1.52;KEGG: 00531+3.2.1.52;Reactome: R-HSA-2024101;Reactome: R-HSA-2022857;Reactome: R-HSA-2160916 "Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)";"Glycosphingolipid metabolism";"Chitin degradation II (Vibrio)";"Various types of N-glycan biosynthesis";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Other glycan degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Glycosaminoglycan degradation";"CS/DS degradation";"Keratan sulfate degradation";"Hyaluronan uptake and degradation" ID=BGER009652-PA|Name=BGER009652-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER015367-PA|Name=BGER015367-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER021039-PA|Name=BGER021039-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER011090-PA|Name=BGER011090-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER005296-PA|Name=BGER005296-PA 7 Reactome: R-HSA-5368598;Reactome: R-HSA-4641258;Reactome: R-HSA-4641262;Reactome: R-HSA-4086400;Reactome: R-HSA-5663220;Reactome: R-HSA-201681;Reactome: R-HSA-201688 "Negative regulation of TCF-dependent signaling by DVL-interacting proteins";"Degradation of DVL";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"PCP/CE pathway";"RHO GTPases Activate Formins";"TCF dependent signaling in response to WNT";"WNT mediated activation of DVL" ID=BGER002373-PA|Name=BGER002373-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" ID=BGER006375-PA|Name=BGER006375-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER011704-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER029481-PA|Name=BGER029481-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER017099-PA|Name=BGER017099-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER019643-PA|Name=BGER019643-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER014187-PA|Name=BGER014187-PA 10 KEGG: 00604+3.2.1.23;KEGG: 00531+3.2.1.23;KEGG: 00511+3.2.1.23;Reactome: R-HSA-2206292;KEGG: 00600+3.2.1.23;Reactome: R-HSA-2024096;Reactome: R-HSA-6798695;KEGG: 00052+3.2.1.23;Reactome: R-HSA-2160916;MetaCyc: PWY-6807 "Glycosphingolipid biosynthesis - ganglio series";"Glycosaminoglycan degradation";"Other glycan degradation";"MPS VII - Sly syndrome";"Sphingolipid metabolism";"HS-GAG degradation";"Neutrophil degranulation";"Galactose metabolism";"Hyaluronan uptake and degradation";"Xyloglucan degradation II (exoglucanase)" ID=BGER011562-PA|Name=BGER011562-PA 27 Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-168276;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-170822 "Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"NS1 Mediated Effects on Host Pathways";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Regulation of Glucokinase by Glucokinase Regulatory Protein" ID=BGER016904-PA|Name=BGER016904-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "VEGFA-VEGFR2 Pathway";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER026051-PA|Name=BGER026051-PA 8 Reactome: R-HSA-68867;Reactome: R-HSA-68827;Reactome: R-HSA-68616;Reactome: R-HSA-113507;Reactome: R-HSA-68949;Reactome: R-HSA-68689;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Assembly of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the ORC complex at the origin of replication";"E2F-enabled inhibition of pre-replication complex formation";"Orc1 removal from chromatin";"CDC6 association with the ORC:origin complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" ID=BGER015129-PA|Name=BGER015129-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER022616-PA|Name=BGER022616-PA 3 Reactome: R-HSA-8939243;Reactome: R-HSA-2559580;Reactome: R-HSA-8943724 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"Oxidative Stress Induced Senescence";"Regulation of PTEN gene transcription" ID=BGER009222-PA|Name=BGER009222-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-2151201 "PPARA activates gene expression";"Transcriptional activation of mitochondrial biogenesis" ID=BGER013682-PA|Name=BGER013682-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER014284-PA|Name=BGER014284-PA 3 Reactome: R-HSA-5578775;Reactome: R-HSA-425561;Reactome: R-HSA-418359 "Ion homeostasis";"Sodium/Calcium exchangers";"Reduction of cytosolic Ca++ levels" ID=BGER007756-PA|Name=BGER007756-PA 3 Reactome: R-HSA-5173105;Reactome: R-HSA-5083627;Reactome: R-HSA-2022854 "O-linked glycosylation";"Defective LARGE causes MDDGA6 and MDDGB6";"Keratan sulfate biosynthesis" ID=BGER004528-PA|Name=BGER004528-PA 14 KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-5972;MetaCyc: PWY-7724 "Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)" ID=BGER029167-PA|Name=BGER029167-PA 14 MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-5080;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199 "Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation" ID=BGER022080-PA|Name=BGER022080-PA 14 MetaCyc: PWY-8051;MetaCyc: PWY-7411;MetaCyc: PWY-7782;MetaCyc: PWY-8053;MetaCyc: PWY-6453;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7417;MetaCyc: PWY-7589;Reactome: R-HSA-1483166;KEGG: 00564+2.3.1.51;MetaCyc: PWY-8055;MetaCyc: PWY-5667;MetaCyc: PWY-5981;MetaCyc: PWY-7587 "Anandamide biosynthesis I";"Phosphatidate biosynthesis (yeast)";"Plasmalogen biosynthesis";"Anandamide biosynthesis II";"Stigma estolide biosynthesis";"Glycerolipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Palmitoleate biosynthesis III (cyanobacteria)";"Synthesis of PA";"Glycerophospholipid metabolism";"Palmitoyl ethanolamide biosynthesis";"CDP-diacylglycerol biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)" ID=BGER010102-PA|Name=BGER010102-PA 4 KEGG: 00513+2.4.1.258;KEGG: 00510+2.4.1.258;Reactome: R-HSA-446193;Reactome: R-HSA-4720475 "Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Defective ALG3 causes ALG3-CDG (CDG-1d)" ID=BGER028333-PA|Name=BGER028333-PA 2 Reactome: R-HSA-5658442;Reactome: R-HSA-6802953 "Regulation of RAS by GAPs";"RAS signaling downstream of NF1 loss-of-function variants" ID=BGER028941-PA|Name=BGER028941-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER029881-PA|Name=BGER029881-PA 31 Reactome: R-HSA-75105;MetaCyc: PWY-5366;KEGG: 00780+1.1.1.100+4.2.1.59+2.3.1.41;MetaCyc: PWY-7663;MetaCyc: PWY-6282;MetaCyc: PWY-5989;MetaCyc: PWY-7388;MetaCyc: PWY-8049;MetaCyc: PWY-5142;MetaCyc: PWY-5973;MetaCyc: PWY-7858;MetaCyc: PWY-7746;MetaCyc: PWY-7723;MetaCyc: PWY-4381;MetaCyc: PWY-6799;MetaCyc: PWY-8047;MetaCyc: PWY-7664;Reactome: R-HSA-199220;MetaCyc: PWY-5994;Reactome: R-HSA-9029558;MetaCyc: PWY-8012;KEGG: 00061+1.1.1.100+2.3.1.85+4.2.1.59+2.3.1.39+2.3.1.41+3.1.2.14;MetaCyc: PWYG-321;MetaCyc: PWY-5971;MetaCyc: PWY-6113;MetaCyc: PWY-5147;MetaCyc: PWY-5367;MetaCyc: PWY-5966-1;MetaCyc: PWY-6519;Reactome: R-HSA-163765;Reactome: R-HSA-2426168 "Fatty acyl-CoA biosynthesis";"Palmitoleate biosynthesis II (plants and bacteria)";"Biotin metabolism";"Gondoate biosynthesis (anaerobic)";"Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)";"Stearate biosynthesis II (bacteria and plants)";"Octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)";"Pederin biosynthesis";"Acyl-[acyl-carrier protein] thioesterase pathway";"Cis-vaccenate biosynthesis";"(5Z)-dodecenoate biosynthesis II";"Mycobacterial sulfolipid biosynthesis";"Bacterial bioluminescence";"Fatty acid biosynthesis initiation (bacteria and plants)";"Fatty acid biosynthesis initiation (plant mitochondria)";"Bryostatin biosynthesis";"Oleate biosynthesis IV (anaerobic)";"Vitamin B5 (pantothenate) metabolism";"Palmitate biosynthesis (animals and fungi, cytoplasm)";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Mupirocin biosynthesis";"Fatty acid biosynthesis";"";"Palmitate biosynthesis II (bacteria and plant cytoplasm)";"Superpathway of mycolate biosynthesis";"Oleate biosynthesis I (plants)";"Petroselinate biosynthesis";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"8-amino-7-oxononanoate biosynthesis I";"ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)" ID=BGER011519-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER008614-PA|Name=BGER008614-PA 1 Reactome: R-HSA-525793 "Myogenesis" ID=BGER013427-PA|Name=BGER013427-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER017633-PA|Name=BGER017633-PA 1 Reactome: R-HSA-525793 "Myogenesis" ID=BGER009353-PA|Name=BGER009353-PA 11 Reactome: R-HSA-110314;Reactome: R-HSA-68962;Reactome: R-HSA-174430;Reactome: R-HSA-68952;Reactome: R-HSA-5696400;Reactome: R-HSA-6782135;Reactome: R-HSA-5651801;Reactome: R-HSA-5696397;Reactome: R-HSA-6782210;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942 "Recognition of DNA damage by PCNA-containing replication complex";"Activation of the pre-replicative complex";"Telomere C-strand synthesis initiation";"DNA replication initiation";"Dual Incision in GG-NER";"Dual incision in TC-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)" ID=BGER007988-PA|Name=BGER007988-PA 19 Reactome: R-HSA-442982;Reactome: R-HSA-936837;Reactome: R-HSA-6802952;Reactome: R-HSA-5673001;Reactome: R-HSA-399719;Reactome: R-HSA-9609736;Reactome: R-HSA-5673000;Reactome: R-HSA-9620244;Reactome: R-HSA-111932;Reactome: R-HSA-9617324;Reactome: R-HSA-9649948;Reactome: R-HSA-9022692;Reactome: R-HSA-5576892;Reactome: R-HSA-6802955;Reactome: R-HSA-5578775;Reactome: R-HSA-3371571;Reactome: R-HSA-6802946;Reactome: R-HSA-438066;Reactome: R-HSA-877300 "Ras activation upon Ca2+ influx through NMDA receptor";"Ion transport by P-type ATPases";"Signaling by BRAF and RAF fusions";"RAF/MAP kinase cascade";"Trafficking of AMPA receptors";"Assembly and cell surface presentation of NMDA receptors";"RAF activation";"Long-term potentiation";"CaMK IV-mediated phosphorylation of CREB";"Negative regulation of NMDA receptor-mediated neuronal transmission";"Signaling downstream of RAS mutants";"Regulation of MECP2 expression and activity";"Phase 0 - rapid depolarisation";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Ion homeostasis";"HSF1-dependent transactivation";"Signaling by moderate kinase activity BRAF mutants";"Unblocking of NMDA receptors, glutamate binding and activation";"Interferon gamma signaling" ID=BGER003421-PA|Name=BGER003421-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER015135-PA|Name=BGER015135-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER023348-PA|Name=BGER023348-PA 11 Reactome: R-HSA-418594;Reactome: R-HSA-163615;Reactome: R-HSA-418597;Reactome: R-HSA-163359;KEGG: 00230+4.6.1.1;Reactome: R-HSA-432040;Reactome: R-HSA-5610787;Reactome: R-HSA-170660;Reactome: R-HSA-170670;Reactome: R-HSA-164378;Reactome: R-HSA-418555 "G alpha (i) signalling events";"PKA activation";"G alpha (z) signalling events";"Glucagon signaling in metabolic regulation";"Purine metabolism";"Vasopressin regulates renal water homeostasis via Aquaporins";"Hedgehog 'off' state";"Adenylate cyclase activating pathway";"Adenylate cyclase inhibitory pathway";"PKA activation in glucagon signalling";"G alpha (s) signalling events" ID=BGER029060-PA|Name=BGER029060-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER005060-PA|Name=BGER005060-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER025563-PA|Name=BGER025563-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER011477-PA|Name=BGER011477-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER018582-PA|Name=BGER018582-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER015633-PA|Name=BGER015633-PA 7 Reactome: R-HSA-5689880;Reactome: R-HSA-171319;Reactome: R-HSA-5696394;Reactome: R-HSA-3214847;Reactome: R-HSA-201722;Reactome: R-HSA-5689603;Reactome: R-HSA-606279 "Ub-specific processing proteases";"Telomere Extension By Telomerase";"DNA Damage Recognition in GG-NER";"HATs acetylate histones";"Formation of the beta-catenin:TCF transactivating complex";"UCH proteinases";"Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER005822-PA|Name=BGER005822-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" ID=BGER021879-PA|Name=BGER021879-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER017392-PA|Name=BGER017392-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER018189-PA|Name=BGER018189-PA 9 Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-6804756;Reactome: R-HSA-674695;Reactome: R-HSA-167161;Reactome: R-HSA-75953;Reactome: R-HSA-167162 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Pre-transcription Events";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape" ID=BGER001448-PA|Name=BGER001448-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" ID=BGER014565-PA|Name=BGER014565-PA 12 KEGG: 05165+2.7.11.1;Reactome: R-HSA-6804756;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-380972;KEGG: 05170+2.7.11.1;Reactome: R-HSA-1632852;Reactome: R-HSA-5628897;Reactome: R-HSA-9619483;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1 "Human papillomavirus infection";"Regulation of TP53 Activity through Phosphorylation";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Energy dependent regulation of mTOR by LKB1-AMPK";"Human immunodeficiency virus 1 infection";"Macroautophagy";"TP53 Regulates Metabolic Genes";"Activation of AMPK downstream of NMDARs";"mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway" ID=BGER021080-PA|Name=BGER021080-PA 3 Reactome: R-HSA-110328;Reactome: R-HSA-110357;Reactome: R-HSA-110329 "Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine" ID=BGER022471-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER013018-PA|Name=BGER013018-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER016774-PA|Name=BGER016774-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER008027-PA|Name=BGER008027-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER025417-PA|Name=BGER025417-PA 6 MetaCyc: PWY-7356;Reactome: R-HSA-196819;MetaCyc: PWY-6908;KEGG: 00730+2.7.6.2;MetaCyc: PWY-6907;MetaCyc: PWY-6898 "Thiamine salvage IV (yeast)";"Vitamin B1 (thiamin) metabolism";"Thiamine diphosphate biosynthesis IV (eukaryotes)";"Thiamine metabolism";"Thiamine diphosphate biosynthesis III (Staphylococcus)";"Thiamine salvage III" ID=BGER029570-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER019308-PA|Name=BGER019308-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER005670-PA|Name=BGER005670-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER018662-PA|Name=BGER018662-PA 7 Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER028100-PA|Name=BGER028100-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" ID=BGER027070-PA|Name=BGER027070-PA 6 Reactome: R-HSA-5696400;Reactome: R-HSA-8951664;Reactome: R-HSA-5696395;Reactome: R-HSA-6796648;Reactome: R-HSA-5689880;Reactome: R-HSA-5696394 "Dual Incision in GG-NER";"Neddylation";"Formation of Incision Complex in GG-NER";"TP53 Regulates Transcription of DNA Repair Genes";"Ub-specific processing proteases";"DNA Damage Recognition in GG-NER" ID=BGER021670-PA|Name=BGER021670-PA 14 Reactome: R-HSA-5651801;Reactome: R-HSA-5655862;Reactome: R-HSA-174411;Reactome: R-HSA-69091;Reactome: R-HSA-6782135;Reactome: R-HSA-110312;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-110320;Reactome: R-HSA-6782210;Reactome: R-HSA-5696397;Reactome: R-HSA-5656121;Reactome: R-HSA-110314;Reactome: R-HSA-5696400 "PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK";"Polymerase switching on the C-strand of the telomere";"Polymerase switching";"Dual incision in TC-NER";"Translesion synthesis by REV1";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by POLI";"Recognition of DNA damage by PCNA-containing replication complex";"Dual Incision in GG-NER" ID=BGER008485-PA|Name=BGER008485-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER028125-PA|Name=BGER028125-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021321-PA|Name=BGER021321-PA 10 KEGG: 00030+2.7.1.11;KEGG: 00010+2.7.1.11;MetaCyc: PWY-1861;KEGG: 00051+2.7.1.11;KEGG: 00052+2.7.1.11;MetaCyc: PWY-1042;Reactome: R-HSA-70171;MetaCyc: PWY-7385;MetaCyc: PWY-5484;KEGG: 00680+2.7.1.11 "Pentose phosphate pathway";"Glycolysis / Gluconeogenesis";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Fructose and mannose metabolism";"Galactose metabolism";"Glycolysis IV (plant cytosol)";"Glycolysis";"1,3-propanediol biosynthesis (engineered)";"Glycolysis II (from fructose 6-phosphate)";"Methane metabolism" ID=BGER007312-PA|Name=BGER007312-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" ID=BGER026136-PA|Name=BGER026136-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER005321-PA|Name=BGER005321-PA 5 Reactome: R-HSA-8964616;Reactome: R-HSA-193648;Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-446388 "G beta:gamma signalling through CDC42";"NRAGE signals death through JNK";"Rho GTPase cycle";"G alpha (12/13) signalling events";"Regulation of cytoskeletal remodeling and cell spreading by IPP complex components" ID=BGER019296-PA|Name=BGER019296-PA 1 Reactome: R-HSA-6804759 "Regulation of TP53 Activity through Association with Co-factors" ID=BGER026363-PA|Name=BGER026363-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER000992-PA|Name=BGER000992-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER005484-PA|Name=BGER005484-PA 1 Reactome: R-HSA-399956 "CRMPs in Sema3A signaling" ID=BGER022398-PA|Name=BGER022398-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER020092-PA|Name=BGER020092-PA 2 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603 "DNA Damage Recognition in GG-NER";"UCH proteinases" ID=BGER011186-PA|Name=BGER011186-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER022463-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER010211-PA|Name=BGER010211-PA 1 Reactome: R-HSA-6811438 "Intra-Golgi traffic" ID=BGER012225-PA|Name=BGER012225-PA 3 Reactome: R-HSA-5620916;Reactome: R-HSA-1445148;Reactome: R-HSA-264876 "VxPx cargo-targeting to cilium";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing" ID=BGER027169-PA|Name=BGER027169-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER001724-PA|Name=BGER001724-PA 14 Reactome: R-HSA-110314;Reactome: R-HSA-5696400;Reactome: R-HSA-69091;Reactome: R-HSA-6782135;Reactome: R-HSA-5651801;Reactome: R-HSA-5655862;Reactome: R-HSA-174411;Reactome: R-HSA-5656121;Reactome: R-HSA-5696397;Reactome: R-HSA-6782210;Reactome: R-HSA-5656169;Reactome: R-HSA-110312;Reactome: R-HSA-5685942;Reactome: R-HSA-110320 "Recognition of DNA damage by PCNA-containing replication complex";"Dual Incision in GG-NER";"Polymerase switching";"Dual incision in TC-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK";"Polymerase switching on the C-strand of the telomere";"Translesion synthesis by POLI";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Termination of translesion DNA synthesis";"Translesion synthesis by REV1";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH" ID=BGER013639-PA|Name=BGER013639-PA 3 MetaCyc: PWY-6807;KEGG: 00511+3.2.1.51;Reactome: R-HSA-6798695 "Xyloglucan degradation II (exoglucanase)";"Other glycan degradation";"Neutrophil degranulation" ID=BGER001865-PA|Name=BGER001865-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER002952-PA|Name=BGER002952-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER002035-PA|Name=BGER002035-PA 2 KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" ID=BGER005614-PA|Name=BGER005614-PA 15 Reactome: R-HSA-5693554;Reactome: R-HSA-5693548;Reactome: R-HSA-2559586;Reactome: R-HSA-5685939;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5693565;Reactome: R-HSA-5685942;Reactome: R-HSA-912446;Reactome: R-HSA-5693568;Reactome: R-HSA-69473;Reactome: R-HSA-5693571;Reactome: R-HSA-6804756;Reactome: R-HSA-5693579;Reactome: R-HSA-5693607 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Sensing of DNA Double Strand Breaks";"DNA Damage/Telomere Stress Induced Senescence";"HDR through MMEJ (alt-NHEJ)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"HDR through Homologous Recombination (HRR)";"Meiotic recombination";"Resolution of D-loop Structures through Holliday Junction Intermediates";"G2/M DNA damage checkpoint";"Nonhomologous End-Joining (NHEJ)";"Regulation of TP53 Activity through Phosphorylation";"Homologous DNA Pairing and Strand Exchange";"Processing of DNA double-strand break ends" ID=BGER025516-PA|Name=BGER025516-PA 4 Reactome: R-HSA-8856828;Reactome: R-HSA-5250958;Reactome: R-HSA-6794361;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Toxicity of botulinum toxin type B (BoNT/B)";"Neurexins and neuroligins";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER012201-PA|Name=BGER012201-PA 16 Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-6791226 "Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER010169-PA|Name=BGER010169-PA 3 Reactome: R-HSA-3899300;Reactome: R-HSA-4090294;Reactome: R-HSA-3232118 "SUMOylation of transcription cofactors";"SUMOylation of intracellular receptors";"SUMOylation of transcription factors" ID=BGER029179-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER010188-PA|Name=BGER010188-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER007612-PA|Name=BGER007612-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER003991-PA|Name=BGER003991-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER016606-PA|Name=BGER016606-PA 1 Reactome: R-HSA-211945 "Phase I - Functionalization of compounds" ID=BGER017517-PA|Name=BGER017517-PA 6 Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-450604;Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385 "mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"KSRP (KHSRP) binds and destabilizes mRNA";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA" ID=BGER021721-PA|Name=BGER021721-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER008333-PA|Name=BGER008333-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-159236 "RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER028887-PA|Name=BGER028887-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER021668-PA|Name=BGER021668-PA 24 Reactome: R-HSA-5626467;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-380320 "RHO GTPases activate IQGAPs";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"COPI-mediated anterograde transport";"HCMV Early Events";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes" ID=BGER009642-PA|Name=BGER009642-PA 8 Reactome: R-HSA-196025;Reactome: R-HSA-8856825;Reactome: R-HSA-5099900;Reactome: R-HSA-8856828;Reactome: R-HSA-5140745;Reactome: R-HSA-190873;Reactome: R-HSA-3928665;Reactome: R-HSA-432720 "Formation of annular gap junctions";"Cargo recognition for clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD4";"Clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"Gap junction degradation";"EPH-ephrin mediated repulsion of cells";"Lysosome Vesicle Biogenesis" ID=BGER005820-PA|Name=BGER005820-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" ID=BGER028804-PA|Name=BGER028804-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER001013-PA|Name=BGER001013-PA 2 Reactome: R-HSA-5694530;Reactome: R-HSA-204005 "Cargo concentration in the ER";"COPII-mediated vesicle transport" ID=BGER022563-PA|Name=BGER022563-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER010230-PA|Name=BGER010230-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-416476 "Peptide ligand-binding receptors";"G alpha (q) signalling events" ID=BGER021786-PA|Name=BGER021786-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER006326-PA|Name=BGER006326-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER015663-PA|Name=BGER015663-PA 3 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226;Reactome: R-HSA-8951664 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol";"Neddylation" ID=BGER005886-PA|Name=BGER005886-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER009737-PA|Name=BGER009737-PA 5 Reactome: R-HSA-199220;MetaCyc: PWY-6012-1;KEGG: 00770+2.7.8.7;MetaCyc: PWY-6012;MetaCyc: PWY-6289 "Vitamin B5 (pantothenate) metabolism";"Acyl carrier protein activation";"Pantothenate and CoA biosynthesis";"Acyl carrier protein metabolism";"Petrobactin biosynthesis" ID=BGER025901-PA|Name=BGER025901-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-6733;MetaCyc: PWY-7782 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis" ID=BGER026706-PA|Name=BGER026706-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER003276-PA|Name=BGER003276-PA 1 Reactome: R-HSA-2129379 "Molecules associated with elastic fibres" ID=BGER025823-PA|Name=BGER025823-PA 2 Reactome: R-HSA-375280;Reactome: R-HSA-416476 "Amine ligand-binding receptors";"G alpha (q) signalling events" ID=BGER012194-PA|Name=BGER012194-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER020364-PA|Name=BGER020364-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" ID=BGER013419-PA|Name=BGER013419-PA 10 Reactome: R-HSA-9613354;Reactome: R-HSA-1632852;Reactome: R-HSA-9619483;Reactome: R-HSA-5628897;Reactome: R-HSA-200425;Reactome: R-HSA-2151209;Reactome: R-HSA-380972;Reactome: R-HSA-1445148;Reactome: R-HSA-163680;Reactome: R-HSA-6804756 "Lipophagy";"Macroautophagy";"Activation of AMPK downstream of NMDARs";"TP53 Regulates Metabolic Genes";"Carnitine metabolism";"Activation of PPARGC1A (PGC-1alpha) by phosphorylation";"Energy dependent regulation of mTOR by LKB1-AMPK";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"AMPK inhibits chREBP transcriptional activation activity";"Regulation of TP53 Activity through Phosphorylation" ID=BGER020964-PA|Name=BGER020964-PA 9 MetaCyc: PWY-6367;Reactome: R-HSA-416476;Reactome: R-HSA-112043;Reactome: R-HSA-1855204;KEGG: 04070+3.1.4.11;KEGG: 00562+3.1.4.11;MetaCyc: PWY-6351;MetaCyc: PWY-7039;MetaCyc: PWY-8052 "D-myo-inositol-5-phosphate metabolism";"G alpha (q) signalling events";"PLC beta mediated events";"Synthesis of IP3 and IP4 in the cytosol";"Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Phosphatidate metabolism, as a signaling molecule";"2-arachidonoylglycerol biosynthesis" ID=BGER009740-PA|Name=BGER009740-PA 27 Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-168276;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-170822;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-3301854 "tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"NS1 Mediated Effects on Host Pathways";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"Nuclear Pore Complex (NPC) Disassembly" ID=BGER024901-PA|Name=BGER024901-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER017148-PA|Name=BGER017148-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER011040-PA|Name=BGER011040-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER026670-PA|Name=BGER026670-PA 7 Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-606279;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877 "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Deposition of new CENPA-containing nucleosomes at the centromere";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase" ID=BGER011878-PA|Name=BGER011878-PA 6 Reactome: R-HSA-72702;Reactome: R-HSA-72649;Reactome: R-HSA-72706;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72689 "Ribosomal scanning and start codon recognition";"Translation initiation complex formation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"Formation of a pool of free 40S subunits" ID=BGER003065-PA|Name=BGER003065-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER016253-PA|Name=BGER016253-PA 14 MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433 "Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)" ID=BGER004698-PA|Name=BGER004698-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER007036-PA|Name=BGER007036-PA 1 Reactome: R-HSA-8866654 "E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER010478-PA|Name=BGER010478-PA 8 MetaCyc: PWY-7717;MetaCyc: PWY-7765;KEGG: 00380+3.5.1.9;KEGG: 00630+3.5.1.9;MetaCyc: PWY-5651;MetaCyc: PWY-6309;MetaCyc: PWY-7734;MetaCyc: PWY-7733 "3-hydroxy-4-methyl-anthranilate biosynthesis I";"3-hydroxy-4-methyl-anthranilate biosynthesis II";"Tryptophan metabolism";"Glyoxylate and dicarboxylate metabolism";"L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde";"L-tryptophan degradation XI (mammalian, via kynurenine)";"Quinoxaline-2-carboxylate biosynthesis";"3-hydroxyquinaldate biosynthesis" ID=BGER002346-PA|Name=BGER002346-PA 1 Reactome: R-HSA-202733 "Cell surface interactions at the vascular wall" ID=BGER004409-PA|Name=BGER004409-PA 56 Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5607761;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974 "Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of AXIN";"Separation of Sister Chromatids";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Ub-specific processing proteases";"Degradation of DVL";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway" ID=BGER024321-PA|Name=BGER024321-PA 1 Reactome: R-HSA-9633012 "Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER002345-PA|Name=BGER002345-PA 4 Reactome: R-HSA-445095;Reactome: R-HSA-375165;Reactome: R-HSA-6807878;Reactome: R-HSA-5673001 "Interaction between L1 and Ankyrins";"NCAM signaling for neurite out-growth";"COPI-mediated anterograde transport";"RAF/MAP kinase cascade" ID=BGER023397-PA|Name=BGER023397-PA 5 Reactome: R-HSA-5221030;Reactome: R-HSA-110357;Reactome: R-HSA-110329;Reactome: R-HSA-110328;Reactome: R-HSA-3108214 "TET1,2,3 and TDG demethylate DNA";"Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"SUMOylation of DNA damage response and repair proteins" ID=BGER019150-PA|Name=BGER019150-PA 1 Reactome: R-HSA-72203 "Processing of Capped Intron-Containing Pre-mRNA" ID=BGER023206-PA|Name=BGER023206-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER024646-PA|Name=BGER024646-PA 5 Reactome: R-HSA-427413;Reactome: R-HSA-5250924;Reactome: R-HSA-73772;Reactome: R-HSA-73762;Reactome: R-HSA-73863 "NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Initiation";"RNA Polymerase I Transcription Termination" ID=BGER018966-PA|Name=BGER018966-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER010288-PA|Name=BGER010288-PA 14 MetaCyc: PWY-8055;KEGG: 00565+3.1.3.4;KEGG: 00564+3.1.3.4;KEGG: 00561+3.1.3.4;MetaCyc: PWY-8051;Reactome: R-HSA-1483213;MetaCyc: PWY-7782;MetaCyc: PWY-8053;Reactome: R-HSA-4419969;KEGG: 00600+3.1.3.4;MetaCyc: PWY-6453;Reactome: R-HSA-75109;MetaCyc: PWY-8052;Reactome: R-HSA-1483191 "Palmitoyl ethanolamide biosynthesis";"Ether lipid metabolism";"Glycerophospholipid metabolism";"Glycerolipid metabolism";"Anandamide biosynthesis I";"Synthesis of PE";"Plasmalogen biosynthesis";"Anandamide biosynthesis II";"Depolymerisation of the Nuclear Lamina";"Sphingolipid metabolism";"Stigma estolide biosynthesis";"Triglyceride biosynthesis";"2-arachidonoylglycerol biosynthesis";"Synthesis of PC" ID=BGER026375-PA|Name=BGER026375-PA 3 Reactome: R-HSA-500753;KEGG: 00240+1.3.5.2;MetaCyc: PWY-5686 "Pyrimidine biosynthesis";"Pyrimidine metabolism";"UMP biosynthesis I" ID=BGER012573-PA|Name=BGER012573-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER016519-PA|Name=BGER016519-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" ID=BGER005682-PA|Name=BGER005682-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER007924-PA|Name=BGER007924-PA 4 Reactome: R-HSA-72086;Reactome: R-HSA-77075;MetaCyc: PWY-7375;Reactome: R-HSA-167160 "mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"Mrna capping I";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection" ID=BGER015571-PA|Name=BGER015571-PA 5 Reactome: R-HSA-8856828;Reactome: R-HSA-196025;Reactome: R-HSA-3928665;Reactome: R-HSA-8856825;Reactome: R-HSA-190873 "Clathrin-mediated endocytosis";"Formation of annular gap junctions";"EPH-ephrin mediated repulsion of cells";"Cargo recognition for clathrin-mediated endocytosis";"Gap junction degradation" ID=BGER011699-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER011577-PA|Name=BGER011577-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER016770-PA|Name=BGER016770-PA 2 MetaCyc: PWY-7221;KEGG: 00230+2.7.4.8 "Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism" ID=BGER029060-PC|Name=BGER029060-PC 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008099-PA|Name=BGER008099-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER004164-PA|Name=BGER004164-PA 5 Reactome: R-HSA-937041;Reactome: R-HSA-168164;Reactome: R-HSA-936964;Reactome: R-HSA-166166;Reactome: R-HSA-937072 "IKK complex recruitment mediated by RIP1";"Toll Like Receptor 3 (TLR3) Cascade";"Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon";"MyD88-independent TLR4 cascade";"TRAF6-mediated induction of TAK1 complex within TLR4 complex" ID=BGER002804-PA|Name=BGER002804-PA 26 Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-5626467;Reactome: R-HSA-9646399;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-389960;Reactome: R-HSA-2500257;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-5617833;Reactome: R-HSA-190861;Reactome: R-HSA-389977;Reactome: R-HSA-8852276;Reactome: R-HSA-380320;Reactome: R-HSA-6811434;Reactome: R-HSA-68877 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"RHO GTPases activate IQGAPs";"Aggrephagy";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Formation of tubulin folding intermediates by CCT/TriC";"Resolution of Sister Chromatid Cohesion";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Cilium Assembly";"Gap junction assembly";"Post-chaperonin tubulin folding pathway";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Recruitment of NuMA to mitotic centrosomes";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase" ID=BGER025257-PA|Name=BGER025257-PA 4 KEGG: 00513+3.2.1.113;Reactome: R-HSA-901032;KEGG: 00510+3.2.1.113;MetaCyc: PWY-7919 "Various types of N-glycan biosynthesis";"ER Quality Control Compartment (ERQC)";"N-Glycan biosynthesis";"Protein N-glycosylation processing phase (plants and animals)" ID=BGER011459-PA|Name=BGER011459-PA 7 Reactome: R-HSA-2979096;Reactome: R-HSA-2122948;Reactome: R-HSA-2894862;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2691232;Reactome: R-HSA-2660826 "NOTCH2 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant" ID=BGER029060-PD|Name=BGER029060-PD 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER013485-PA|Name=BGER013485-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER002310-PA|Name=BGER002310-PA 2 KEGG: 00900+2.1.1.100;Reactome: R-HSA-163841 "Terpenoid backbone biosynthesis";"Gamma carboxylation, hypusine formation and arylsulfatase activation" ID=BGER000740-PA|Name=BGER000740-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER011411-PA|Name=BGER011411-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER012086-PA|Name=BGER012086-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" ID=BGER013431-PA|Name=BGER013431-PA 1 Reactome: R-HSA-428359 "Insulin-like Growth Factor-2 mRNA Binding Proteins (IGF2BPs/IMPs/VICKZs) bind RNA" ID=BGER015785-PA|Name=BGER015785-PA 7 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05170+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human immunodeficiency virus 1 infection" ID=BGER028433-PA|Name=BGER028433-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026602-PA|Name=BGER026602-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER025629-PB|Name=BGER025629-PB 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER002580-PA|Name=BGER002580-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER003059-PA|Name=BGER003059-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER027576-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER016698-PA|Name=BGER016698-PA 2 Reactome: R-HSA-376176;Reactome: R-HSA-5663220 "Signaling by ROBO receptors";"RHO GTPases Activate Formins" ID=BGER020497-PA|Name=BGER020497-PA 8 MetaCyc: PWY-5194;MetaCyc: PWY-5196;KEGG: 00330+2.5.1.22;KEGG: 00480+2.5.1.22;KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107;KEGG: 00270+2.5.1.22;Reactome: R-HSA-351202;MetaCyc: PWY-7377 "Siroheme biosynthesis";"Factor 430 biosynthesis";"Arginine and proline metabolism";"Glutathione metabolism";"Porphyrin and chlorophyll metabolism";"Cysteine and methionine metabolism";"Metabolism of polyamines";"Cob(ii)yrinate a,c-diamide biosynthesis I (early cobalt insertion)" ID=BGER010639-PA|Name=BGER010639-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-5576893 "Phase 0 - rapid depolarisation";"Phase 2 - plateau phase" ID=BGER007667-PA|Name=BGER007667-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" ID=BGER002655-PA|Name=BGER002655-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER003380-PA|Name=BGER003380-PA 6 Reactome: R-HSA-72689;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"Translation initiation complex formation" ID=BGER010484-PA|Name=BGER010484-PA 3 Reactome: R-HSA-9033807;MetaCyc: PWY-7831;MetaCyc: PWY-7833 "ABO blood group biosynthesis";"ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide";"Biosynthesis of Lewis epitopes (H. pylori)" ID=BGER011399-PA|Name=BGER011399-PA 3 Reactome: R-HSA-9609690;Reactome: R-HSA-3899300;Reactome: R-HSA-6804757 "HCMV Early Events";"SUMOylation of transcription cofactors";"Regulation of TP53 Degradation" ID=BGER029019-PA|Name=BGER029019-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER022084-PA|Name=BGER022084-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER011572-PA|Name=BGER011572-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER022407-PA|Name=BGER022407-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER005259-PA|Name=BGER005259-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER014445-PA|Name=BGER014445-PA 5 Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450385;Reactome: R-HSA-430039;Reactome: R-HSA-450604 "ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 5' to 3' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER011929-PA|Name=BGER011929-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER003861-PA|Name=BGER003861-PA 2 Reactome: R-HSA-9603798;Reactome: R-HSA-1369062 "Class I peroxisomal membrane protein import";"ABC transporters in lipid homeostasis" ID=BGER017513-PA|Name=BGER017513-PA 6 MetaCyc: PWY-6807;KEGG: 00511+3.2.1.23;KEGG: 00052+3.2.1.23;KEGG: 00531+3.2.1.23;KEGG: 00600+3.2.1.23;KEGG: 00604+3.2.1.23 "Xyloglucan degradation II (exoglucanase)";"Other glycan degradation";"Galactose metabolism";"Glycosaminoglycan degradation";"Sphingolipid metabolism";"Glycosphingolipid biosynthesis - ganglio series" ID=BGER021442-PA|Name=BGER021442-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER029339-PA|Name=BGER029339-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER022838-PA|Name=BGER022838-PA 5 Reactome: R-HSA-3249367;Reactome: R-HSA-6798695;Reactome: R-HSA-3270619;Reactome: R-HSA-3134975;Reactome: R-HSA-1834941 "STAT6-mediated induction of chemokines";"Neutrophil degranulation";"IRF3-mediated induction of type I IFN";"Regulation of innate immune responses to cytosolic DNA";"STING mediated induction of host immune responses" ID=BGER003334-PA|Name=BGER003334-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER007258-PA|Name=BGER007258-PA 17 Reactome: R-HSA-1538133;Reactome: R-HSA-139915;Reactome: R-HSA-69656;Reactome: R-HSA-6804114;Reactome: R-HSA-113501;Reactome: R-HSA-1912408;Reactome: R-HSA-1362277;Reactome: R-HSA-2559585;Reactome: R-HSA-69202;Reactome: R-HSA-69205;Reactome: R-HSA-2559580;Reactome: R-HSA-111448;Reactome: R-HSA-2173796;Reactome: R-HSA-1362300;Reactome: R-HSA-9616222;Reactome: R-HSA-69231;Reactome: R-HSA-8953750 "G0 and Early G1";"Activation of PUMA and translocation to mitochondria";"Cyclin A:Cdk2-associated events at S phase entry";"TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Pre-NOTCH Transcription and Translation";"Transcription of E2F targets under negative control by DREAM complex";"Oncogene Induced Senescence";"Cyclin E associated events during G1/S transition";"G1/S-Specific Transcription";"Oxidative Stress Induced Senescence";"Activation of NOXA and translocation to mitochondria";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Transcriptional regulation of granulopoiesis";"Cyclin D associated events in G1";"Transcriptional Regulation by E2F6" ID=BGER006247-PA|Name=BGER006247-PA 8 Reactome: R-HSA-163615;Reactome: R-HSA-442720;Reactome: R-HSA-381676;Reactome: R-HSA-164378;Reactome: R-HSA-432040;Reactome: R-HSA-180024;Reactome: R-HSA-5610787;Reactome: R-HSA-983231 "PKA activation";"CREB1 phosphorylation through the activation of Adenylate Cyclase";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"PKA activation in glucagon signalling";"Vasopressin regulates renal water homeostasis via Aquaporins";"DARPP-32 events";"Hedgehog 'off' state";"Factors involved in megakaryocyte development and platelet production" ID=BGER003982-PA|Name=BGER003982-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER010507-PA|Name=BGER010507-PA 5 Reactome: R-HSA-4341670;Reactome: R-HSA-2132295;Reactome: R-HSA-1660662;Reactome: R-HSA-6798695;Reactome: R-HSA-4085001 "Defective NEU1 causes sialidosis";"MHC class II antigen presentation";"Glycosphingolipid metabolism";"Neutrophil degranulation";"Sialic acid metabolism" ID=BGER000005-PA|Name=BGER000005-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER014620-PA|Name=BGER014620-PA 13 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-6802948;KEGG: 05170+2.7.11.1;Reactome: R-HSA-6802952;Reactome: R-HSA-6802946;KEGG: 04151+2.7.11.1;Reactome: R-HSA-5674135;Reactome: R-HSA-6802955;KEGG: 04926+2.7.11.1;Reactome: R-HSA-9649948;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"Signaling by high-kinase activity BRAF mutants";"Human immunodeficiency virus 1 infection";"Signaling by BRAF and RAF fusions";"Signaling by moderate kinase activity BRAF mutants";"PI3K-Akt signaling pathway";"MAP2K and MAPK activation";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Relaxin signaling pathway";"Signaling downstream of RAS mutants";"mTOR signaling pathway";"Thermogenesis" ID=BGER029024-PA|Name=BGER029024-PA 4 Reactome: R-HSA-2408522;Reactome: R-HSA-379716;KEGG: 00970+6.1.1.6;Reactome: R-HSA-379726 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" ID=BGER009746-PA|Name=BGER009746-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER027214-PA|Name=BGER027214-PA 10 Reactome: R-HSA-611105;Reactome: R-HSA-111457;Reactome: R-HSA-111459;Reactome: R-HSA-111464;Reactome: R-HSA-5628897;Reactome: R-HSA-9627069;Reactome: R-HSA-2151201;Reactome: R-HSA-3299685;Reactome: R-HSA-111463;Reactome: R-HSA-111458 "Respiratory electron transport";"Release of apoptotic factors from the mitochondria";"Activation of caspases through apoptosome-mediated cleavage";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"TP53 Regulates Metabolic Genes";"Regulation of the apoptosome activity";"Transcriptional activation of mitochondrial biogenesis";"Detoxification of Reactive Oxygen Species";"SMAC (DIABLO) binds to IAPs";"Formation of apoptosome" ID=BGER012328-PA|Name=BGER012328-PA 57 Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442;Reactome: R-HSA-69481;Reactome: R-HSA-5610780 "APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome" ID=BGER019821-PA|Name=BGER019821-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" ID=BGER004939-PA|Name=BGER004939-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-381340;Reactome: R-HSA-212436 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation";"Generic Transcription Pathway" ID=BGER022974-PA|Name=BGER022974-PA 8 Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-6804115;Reactome: R-HSA-380320;Reactome: R-HSA-8854518 "Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2" ID=BGER003182-PA|Name=BGER003182-PA 4 KEGG: 00970+6.1.1.11;Reactome: R-HSA-2408557;Reactome: R-HSA-379716;MetaCyc: PWY-6281 "Aminoacyl-tRNA biosynthesis";"Selenocysteine synthesis";"Cytosolic tRNA aminoacylation";"L-selenocysteine biosynthesis II (archaea and eukaryotes)" ID=BGER007313-PA|Name=BGER007313-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER028770-PA|Name=BGER028770-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER001623-PA|Name=BGER001623-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" ID=BGER022110-PA|Name=BGER022110-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER012226-PA|Name=BGER012226-PA 3 Reactome: R-HSA-5620916;Reactome: R-HSA-264876;Reactome: R-HSA-1445148 "VxPx cargo-targeting to cilium";"Insulin processing";"Translocation of SLC2A4 (GLUT4) to the plasma membrane" ID=BGER015375-PA|Name=BGER015375-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER008310-PA|Name=BGER008310-PA 1 Reactome: R-HSA-1483191 "Synthesis of PC" ID=BGER026323-PA|Name=BGER026323-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER012219-PA|Name=BGER012219-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER024246-PD|Name=BGER024246-PD 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER007197-PA|Name=BGER007197-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER005547-PA|Name=BGER005547-PA 12 KEGG: 00230+6.3.3.1;KEGG: 00230+6.3.4.13;KEGG: 00670+2.1.2.9;MetaCyc: PWY-6122;MetaCyc: PWY-6121;KEGG: 00670+2.1.2.2;MetaCyc: PWY-6613;KEGG: 00970+2.1.2.9;MetaCyc: PWY-6277;KEGG: 00230+2.1.2.2;Reactome: R-HSA-196780;Reactome: R-HSA-73817 "Purine metabolism";"Purine metabolism";"One carbon pool by folate";"5-aminoimidazole ribonucleotide biosynthesis II";"5-aminoimidazole ribonucleotide biosynthesis I";"One carbon pool by folate";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Aminoacyl-tRNA biosynthesis";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"Purine metabolism";"Biotin transport and metabolism";"Purine ribonucleoside monophosphate biosynthesis" ID=BGER028149-PA|Name=BGER028149-PA 24 Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-5626467;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-8955332;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399 "Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"COPI-mediated anterograde transport";"HCMV Early Events";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"RHO GTPases activate IQGAPs";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Carboxyterminal post-translational modifications of tubulin";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy" ID=BGER003979-PA|Name=BGER003979-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER014465-PA|Name=BGER014465-PA 1 Reactome: R-HSA-427975 "Proton/oligopeptide cotransporters" ID=BGER007206-PA|Name=BGER007206-PA 2 Reactome: R-HSA-8986944;Reactome: R-HSA-203927 "Transcriptional Regulation by MECP2";"MicroRNA (miRNA) biogenesis" ID=BGER004407-PA|Name=BGER004407-PA 22 MetaCyc: PWY-6142;MetaCyc: PWY-5659;MetaCyc: PWY-621;MetaCyc: PWY-6992;KEGG: 00520+5.3.1.9;MetaCyc: PWY-5384;MetaCyc: PWY-7347;MetaCyc: PWY-5514;Reactome: R-HSA-5628897;KEGG: 00030+5.3.1.9;MetaCyc: PWY-6981;MetaCyc: PWY-7238;MetaCyc: PWY-7385;Reactome: R-HSA-70171;MetaCyc: PWY-622;MetaCyc: PWY-3801;Reactome: R-HSA-70263;KEGG: 00010+5.3.1.9;Reactome: R-HSA-6798695;KEGG: 00500+5.3.1.9;MetaCyc: PWY-5054;MetaCyc: PWY-8013 "Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"GDP-mannose biosynthesis";"Sucrose degradation III (sucrose invertase)";"1,5-anhydrofructose degradation";"Amino sugar and nucleotide sugar metabolism";"Sucrose degradation IV (sucrose phosphorylase)";"Sucrose biosynthesis III";"UDP-N-acetyl-D-galactosamine biosynthesis II";"TP53 Regulates Metabolic Genes";"Pentose phosphate pathway";"Chitin biosynthesis";"Sucrose biosynthesis II";"1,3-propanediol biosynthesis (engineered)";"Glycolysis";"Starch biosynthesis";"Sucrose degradation II (sucrose synthase)";"Gluconeogenesis";"Glycolysis / Gluconeogenesis";"Neutrophil degranulation";"Starch and sucrose metabolism";"D-sorbitol biosynthesis I";"UDP-N-acetyl-D-galactosamine biosynthesis III" ID=BGER004675-PA|Name=BGER004675-PA 4 Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-76066;Reactome: R-HSA-76061 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER017847-PA|Name=BGER017847-PA 6 Reactome: R-HSA-500753;KEGG: 00240+2.1.3.2;MetaCyc: PWY-7791;MetaCyc: PWY-7790;MetaCyc: PWY-5686;KEGG: 00250+2.1.3.2 "Pyrimidine biosynthesis";"Pyrimidine metabolism";"UMP biosynthesis III";"UMP biosynthesis II";"UMP biosynthesis I";"Alanine, aspartate and glutamate metabolism" ID=BGER020835-PA|Name=BGER020835-PA 2 Reactome: R-HSA-9634600;KEGG: 00051+2.7.1.105+3.1.3.46 "Regulation of glycolysis by fructose 2,6-bisphosphate metabolism";"Fructose and mannose metabolism" ID=BGER019307-PA|Name=BGER019307-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER012335-PA|Name=BGER012335-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER000101-PA|Name=BGER000101-PA 26 Reactome: R-HSA-5626467;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-2500257;Reactome: R-HSA-8955332;Reactome: R-HSA-389960;Reactome: R-HSA-9648025;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-389977;Reactome: R-HSA-190861;Reactome: R-HSA-8852276 "RHO GTPases activate IQGAPs";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Resolution of Sister Chromatid Cohesion";"Carboxyterminal post-translational modifications of tubulin";"Formation of tubulin folding intermediates by CCT/TriC";"EML4 and NUDC in mitotic spindle formation";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Post-chaperonin tubulin folding pathway";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint" ID=BGER021455-PA|Name=BGER021455-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER000388-PA|Name=BGER000388-PA 2 Reactome: R-HSA-418457;Reactome: R-HSA-4086398 "cGMP effects";"Ca2+ pathway" ID=BGER018320-PA|Name=BGER018320-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER022958-PA|Name=BGER022958-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER007272-PA|Name=BGER007272-PA 1 Reactome: R-HSA-8943724 "Regulation of PTEN gene transcription" ID=BGER010695-PA|Name=BGER010695-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER026723-PA|Name=BGER026723-PA 2 Reactome: R-HSA-419812;Reactome: R-HSA-418555 "Calcitonin-like ligand receptors";"G alpha (s) signalling events" ID=BGER019385-PA|Name=BGER019385-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER021010-PA|Name=BGER021010-PA 33 Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-75955;Reactome: R-HSA-73762;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-76042;Reactome: R-HSA-112382;Reactome: R-HSA-69202;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-167160;Reactome: R-HSA-5696395;Reactome: R-HSA-77075;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-113418;Reactome: R-HSA-8939236;Reactome: R-HSA-69231;Reactome: R-HSA-427413;Reactome: R-HSA-674695;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-167161;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167158;Reactome: R-HSA-73863;Reactome: R-HSA-69656;Reactome: R-HSA-167172;Reactome: R-HSA-69273 "RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Transcription Initiation";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Formation of RNA Pol II elongation complex";"Cyclin E associated events during G1/S transition";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of Incision Complex in GG-NER";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of the Early Elongation Complex";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cyclin D associated events in G1";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Pre-transcription Events";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"HIV Transcription Initiation";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase I Transcription Termination";"Cyclin A:Cdk2-associated events at S phase entry";"Transcription of the HIV genome";"Cyclin A/B1/B2 associated events during G2/M transition" ID=BGER003259-PA|Name=BGER003259-PA 6 Reactome: R-HSA-5358606;Reactome: R-HSA-5632928;Reactome: R-HSA-5632927;Reactome: R-HSA-5358565;Reactome: R-HSA-5632968;Reactome: R-HSA-6796648 "Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Defective Mismatch Repair Associated With MSH2";"Defective Mismatch Repair Associated With MSH3";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Defective Mismatch Repair Associated With MSH6";"TP53 Regulates Transcription of DNA Repair Genes" ID=BGER006997-PA|Name=BGER006997-PA 2 Reactome: R-HSA-8856825;Reactome: R-HSA-8856828 "Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis" ID=BGER007873-PA|Name=BGER007873-PA 1 Reactome: R-HSA-3000171 "Non-integrin membrane-ECM interactions" ID=BGER000498-PA|Name=BGER000498-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER012049-PA|Name=BGER012049-PA 1 Reactome: R-HSA-156584 "Cytosolic sulfonation of small molecules" ID=BGER024231-PA|Name=BGER024231-PA 8 Reactome: R-HSA-73614;MetaCyc: PWY-7199;KEGG: 00983+3.5.4.5;MetaCyc: PWY-7181;KEGG: 00240+3.5.4.5;MetaCyc: PWY-6556;MetaCyc: PWY-7193;Reactome: R-HSA-6798695 "Pyrimidine salvage";"Pyrimidine deoxyribonucleosides salvage";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleosides degradation";"Pyrimidine metabolism";"Pyrimidine ribonucleosides salvage II";"Pyrimidine ribonucleosides salvage I";"Neutrophil degranulation" ID=BGER015359-PA|Name=BGER015359-PA 7 Reactome: R-HSA-5620922;Reactome: R-HSA-389960;Reactome: R-HSA-390471;Reactome: R-HSA-6798695;Reactome: R-HSA-389957;Reactome: R-HSA-6814122;Reactome: R-HSA-390450 "BBSome-mediated cargo-targeting to cilium";"Formation of tubulin folding intermediates by CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Neutrophil degranulation";"Prefoldin mediated transfer of substrate to CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Folding of actin by CCT/TriC" ID=BGER008819-PA|Name=BGER008819-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER010423-PA|Name=BGER010423-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER006214-PA|Name=BGER006214-PA 3 MetaCyc: PWY-6619;KEGG: 00230+2.7.1.20;Reactome: R-HSA-74217 "Adenine and adenosine salvage VI";"Purine metabolism";"Purine salvage" ID=BGER025556-PA|Name=BGER025556-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER008000-PA|Name=BGER008000-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER016137-PA|Name=BGER016137-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-6798695 "Protein ubiquitination";"Neutrophil degranulation" ID=BGER025249-PA|Name=BGER025249-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER025578-PA|Name=BGER025578-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" ID=BGER009236-PA|Name=BGER009236-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER002760-PA|Name=BGER002760-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER028394-PA|Name=BGER028394-PA 4 MetaCyc: PWY-7511;Reactome: R-HSA-975144;Reactome: R-HSA-937039;Reactome: R-HSA-9020702 "Protein ubiquitination";"IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation";"IRAK1 recruits IKK complex";"Interleukin-1 signaling" ID=BGER021357-PA|Name=BGER021357-PA 6 KEGG: 00561+2.7.1.107;KEGG: 00564+2.7.1.107;MetaCyc: PWY-7817;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;Reactome: R-HSA-114508 "Glycerolipid metabolism";"Glycerophospholipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Effects of PIP2 hydrolysis" ID=BGER003498-PA|Name=BGER003498-PA 6 KEGG: 00630+1.11.1.6;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017 "Glyoxylate and dicarboxylate metabolism";"Tryptophan metabolism";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes" ID=BGER003980-PA|Name=BGER003980-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER027578-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER022566-PA|Name=BGER022566-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER017031-PA|Name=BGER017031-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER022996-PA|Name=BGER022996-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER020623-PA|Name=BGER020623-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" ID=BGER002913-PA|Name=BGER002913-PA 2 Reactome: R-HSA-5173105;Reactome: R-HSA-5083628 "O-linked glycosylation";"Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3" ID=BGER027401-PA|Name=BGER027401-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017255-PA|Name=BGER017255-PA 11 MetaCyc: PWY-6549;KEGG: 00630+6.3.1.2;MetaCyc: PWY-6964;MetaCyc: PWY-6963;MetaCyc: PWY-381;Reactome: R-HSA-210455;KEGG: 00910+6.3.1.2;KEGG: 00220+6.3.1.2;KEGG: 00250+6.3.1.2;Reactome: R-HSA-8964539;MetaCyc: PWY-5675 "L-glutamine biosynthesis III";"Glyoxylate and dicarboxylate metabolism";"Ammonia assimilation cycle II";"Ammonia assimilation cycle I";"Nitrate reduction II (assimilatory)";"Astrocytic Glutamate-Glutamine Uptake And Metabolism";"Nitrogen metabolism";"Arginine biosynthesis";"Alanine, aspartate and glutamate metabolism";"Glutamate and glutamine metabolism";"Nitrate reduction V (assimilatory)" ID=BGER008318-PA|Name=BGER008318-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER011183-PA|Name=BGER011183-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008757-PA|Name=BGER008757-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" ID=BGER004972-PA|Name=BGER004972-PA 2 Reactome: R-HSA-427413;Reactome: R-HSA-3214815 "NoRC negatively regulates rRNA expression";"HDACs deacetylate histones" ID=BGER013907-PA|Name=BGER013907-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER016534-PA|Name=BGER016534-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023102-PA|Name=BGER023102-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER022918-PA|Name=BGER022918-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER002519-PA|Name=BGER002519-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER001285-PA|Name=BGER001285-PA 13 Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72689 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Formation of a pool of free 40S subunits" ID=BGER021190-PA|Name=BGER021190-PA 3 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" ID=BGER026141-PA|Name=BGER026141-PA 9 Reactome: R-HSA-381340;Reactome: R-HSA-2151201;Reactome: R-HSA-400206;Reactome: R-HSA-2426168;Reactome: R-HSA-1368108;Reactome: R-HSA-1368082;Reactome: R-HSA-1989781;Reactome: R-HSA-400253;Reactome: R-HSA-5617472 "Transcriptional regulation of white adipocyte differentiation";"Transcriptional activation of mitochondrial biogenesis";"Regulation of lipid metabolism by PPARalpha";"Activation of gene expression by SREBF (SREBP)";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"RORA activates gene expression";"PPARA activates gene expression";"Circadian Clock";"Activation of anterior HOX genes in hindbrain development during early embryogenesis" ID=BGER027897-PA|Name=BGER027897-PA 56 Reactome: R-HSA-195253;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5610783;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813 "Degradation of beta-catenin by the destruction complex";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of DVL";"Ub-specific processing proteases";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Degradation of GLI2 by the proteasome";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of AXIN";"Separation of Sister Chromatids" ID=BGER015302-PA|Name=BGER015302-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-419771 "G alpha (i) signalling events";"Opsins" ID=BGER024507-PA|Name=BGER024507-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER010587-PA|Name=BGER010587-PA 1 Reactome: R-HSA-418886 "Netrin mediated repulsion signals" ID=BGER001273-PA|Name=BGER001273-PA 1 Reactome: R-HSA-8953750 "Transcriptional Regulation by E2F6" ID=BGER017347-PA|Name=BGER017347-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER016631-PA|Name=BGER016631-PA 8 MetaCyc: PWY-3581;Reactome: R-HSA-209905;KEGG: 00790+1.14.16.2;MetaCyc: PWY-5394;MetaCyc: PWY-5049;MetaCyc: PWY-6133;KEGG: 00350+1.14.16.2;KEGG: 00950+1.14.16.2 "(S)-reticuline biosynthesis I";"Catecholamine biosynthesis";"Folate biosynthesis";"Betalamic acid biosynthesis";"Rosmarinic acid biosynthesis II";"(S)-reticuline biosynthesis II";"Tyrosine metabolism";"Isoquinoline alkaloid biosynthesis" ID=BGER001442-PA|Name=BGER001442-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER017098-PA|Name=BGER017098-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER003405-PA|Name=BGER003405-PA 10 MetaCyc: PWY-6369;MetaCyc: PWY-6361;KEGG: 00562+2.7.1.158;MetaCyc: PWY-4661;MetaCyc: PWY-6554;Reactome: R-HSA-1855167;KEGG: 04070+2.7.1.158;MetaCyc: PWY-6372;MetaCyc: PWY-6362;Reactome: R-HSA-1855191 "Inositol diphosphates biosynthesis";"1D-myo-inositol hexakisphosphate biosynthesis I (from Ins(1,4,5)P3)";"Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)";"1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)";"Synthesis of pyrophosphates in the cytosol";"Phosphatidylinositol signaling system";"1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)";"1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)";"Synthesis of IPs in the nucleus" ID=BGER012145-PA|Name=BGER012145-PA 2 Reactome: R-HSA-2132295;Reactome: R-HSA-877300 "MHC class II antigen presentation";"Interferon gamma signaling" ID=BGER018927-PA|Name=BGER018927-PA 1 Reactome: R-HSA-9037629 "Lewis blood group biosynthesis" ID=BGER016739-PA|Name=BGER016739-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER023470-PA|Name=BGER023470-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER015358-PA|Name=BGER015358-PA 7 Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-76061;Reactome: R-HSA-73780;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-1834949 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA" ID=BGER021610-PA|Name=BGER021610-PA 4 MetaCyc: PWY-6902;MetaCyc: PWY-6855;MetaCyc: PWY-7822;KEGG: 00520+3.2.1.14 "Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism" ID=BGER023788-PA|Name=BGER023788-PA 57 Reactome: R-HSA-69601;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-195253;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5658442;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-180534 "Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Degradation of beta-catenin by the destruction complex";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of RAS by GAPs";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4" ID=BGER013686-PA|Name=BGER013686-PA 1 MetaCyc: PWY-7942 "5-oxo-L-proline metabolism" ID=BGER024143-PA|Name=BGER024143-PA 1 Reactome: R-HSA-3108214 "SUMOylation of DNA damage response and repair proteins" ID=BGER022973-PA|Name=BGER022973-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" ID=BGER020950-PA|Name=BGER020950-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER027059-PA|Name=BGER027059-PA 2 Reactome: R-HSA-8876725;Reactome: R-HSA-3371453 "Protein methylation";"Regulation of HSF1-mediated heat shock response" ID=BGER022280-PA|Name=BGER022280-PA 4 KEGG: 00860+4.2.1.75;MetaCyc: PWY-5189;MetaCyc: PWY-5188;Reactome: R-HSA-189451 "Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis II (from glycine)";"Tetrapyrrole biosynthesis I (from glutamate)";"Heme biosynthesis" ID=BGER029196-PA|Name=BGER029196-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER024245-PA|Name=BGER024245-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER001440-PA|Name=BGER001440-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER008707-PA|Name=BGER008707-PA 3 MetaCyc: PWY-7511;Reactome: R-HSA-983168;Reactome: R-HSA-6798695 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation";"Neutrophil degranulation" ID=BGER008489-PA|Name=BGER008489-PA 7 Reactome: R-HSA-380320;Reactome: R-HSA-380270;Reactome: R-HSA-8854518;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"AURKA Activation by TPX2";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane" ID=BGER010850-PA|Name=BGER010850-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902 "SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation" ID=BGER020028-PB|Name=BGER020028-PB 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER007995-PA|Name=BGER007995-PA 6 Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-69052;Reactome: R-HSA-68949 "Unwinding of DNA";"Assembly of the pre-replicative complex";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Switching of origins to a post-replicative state";"Orc1 removal from chromatin" ID=BGER020013-PA|Name=BGER020013-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER028942-PA|Name=BGER028942-PA 20 KEGG: 00071+1.3.3.6;MetaCyc: PWY-7007;MetaCyc: PWY-6837;MetaCyc: PWY-7291;MetaCyc: PWY-735;MetaCyc: PWY-7606;MetaCyc: PWY-7338;KEGG: 00592+1.3.3.6;MetaCyc: PWY-6920;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7574;MetaCyc: PWY-7288;MetaCyc: PWY-7858;MetaCyc: PWY-5136;Reactome: R-HSA-9033241;KEGG: 00410+1.3.3.6;MetaCyc: PWY-7726;MetaCyc: PWY-7854;MetaCyc: PWY-7340;MetaCyc: PWY-7337 "Fatty acid degradation";"Methyl ketone biosynthesis (engineered)";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Jasmonic acid biosynthesis";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"alpha-Linolenic acid metabolism";"6-gingerol analog biosynthesis (engineered)";"Propanoate metabolism";"Propanoyl-coa degradation II";"Fatty acid beta-oxidation VII (yeast peroxisome)";"(5Z)-dodecenoate biosynthesis II";"Fatty acid beta-oxidation II (plant peroxisome)";"Peroxisomal protein import";"beta-Alanine metabolism";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"10-cis-heptadecenoyl-CoA degradation (yeast)" ID=BGER027923-PA|Name=BGER027923-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" ID=BGER022055-PA|Name=BGER022055-PA 3 Reactome: R-HSA-204174;Reactome: R-HSA-156590;Reactome: R-HSA-8963684 "Regulation of pyruvate dehydrogenase (PDH) complex";"Glutathione conjugation";"Tyrosine catabolism" ID=BGER001423-PA|Name=BGER001423-PA 5 Reactome: R-HSA-72662;Reactome: R-HSA-156827;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-72649 "Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"Translation initiation complex formation" ID=BGER004821-PA|Name=BGER004821-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER015702-PA|Name=BGER015702-PA 6 MetaCyc: PWY-6580;MetaCyc: PWY-6368;KEGG: 04070+3.1.3.64;Reactome: R-HSA-1660517;KEGG: 00562+3.1.3.64;Reactome: R-HSA-1855183 "Phosphatidylinositol biosynthesis I (bacteria)";"3-phosphoinositide degradation";"Phosphatidylinositol signaling system";"Synthesis of PIPs at the late endosome membrane";"Inositol phosphate metabolism";"Synthesis of IP2, IP, and Ins in the cytosol" ID=BGER019313-PA|Name=BGER019313-PA 14 MetaCyc: PWY-5981;MetaCyc: PWY-7587;MetaCyc: PWY-5667;MetaCyc: PWY-8055;KEGG: 00564+2.3.1.51;Reactome: R-HSA-1483166;MetaCyc: PWY-7417;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7589;MetaCyc: PWY-6453;MetaCyc: PWY-8053;MetaCyc: PWY-7782;MetaCyc: PWY-8051;MetaCyc: PWY-7411 "CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)";"CDP-diacylglycerol biosynthesis I";"Palmitoyl ethanolamide biosynthesis";"Glycerophospholipid metabolism";"Synthesis of PA";"Phospholipid remodeling (phosphatidate, yeast)";"Glycerolipid metabolism";"Palmitoleate biosynthesis III (cyanobacteria)";"Stigma estolide biosynthesis";"Anandamide biosynthesis II";"Plasmalogen biosynthesis";"Anandamide biosynthesis I";"Phosphatidate biosynthesis (yeast)" ID=BGER022355-PA|Name=BGER022355-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER007648-PA|Name=BGER007648-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER005112-PA|Name=BGER005112-PA 6 Reactome: R-HSA-72689;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of a pool of free 40S subunits";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER028106-PA|Name=BGER028106-PA 10 KEGG: 04151+2.7.11.1;Reactome: R-HSA-5655302;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-1839117;Reactome: R-HSA-194840 "PI3K-Akt signaling pathway";"Signaling by FGFR1 in disease";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway";"Signaling by cytosolic FGFR1 fusion mutants";"Rho GTPase cycle" ID=BGER026295-PA|Name=BGER026295-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER017768-PA|Name=BGER017768-PA 3 KEGG: 00010+5.1.3.3;KEGG: 00052+5.1.3.3;MetaCyc: PWY-6317 "Glycolysis / Gluconeogenesis";"Galactose metabolism";"D-galactose degradation I (Leloir pathway)" ID=BGER022571-PA|Name=BGER022571-PA 5 Reactome: R-HSA-381426;Reactome: R-HSA-901042;Reactome: R-HSA-8957275;Reactome: R-HSA-532668;Reactome: R-HSA-879415 "Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Calnexin/calreticulin cycle";"Post-translational protein phosphorylation";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Advanced glycosylation endproduct receptor signaling" ID=BGER019272-PA|Name=BGER019272-PA 1 Reactome: R-HSA-8876725 "Protein methylation" ID=BGER021616-PA|Name=BGER021616-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER009963-PA|Name=BGER009963-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER005338-PA|Name=BGER005338-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER009702-PA|Name=BGER009702-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" ID=BGER011203-PA|Name=BGER011203-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER026251-PA|Name=BGER026251-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER005623-PA|Name=BGER005623-PA 8 MetaCyc: PWY-5738;KEGG: 00051+4.2.1.47;MetaCyc: PWY-5740;MetaCyc: PWY-5739;Reactome: R-HSA-6787639;MetaCyc: PWY-7573;KEGG: 00520+4.2.1.47;MetaCyc: PWY-66 "GDP-6-deoxy-D-talose biosynthesis";"Fructose and mannose metabolism";"GDP-L-colitose biosynthesis";"GDP-D-perosamine biosynthesis";"GDP-fucose biosynthesis";"GDP-mycosamine biosynthesis";"Amino sugar and nucleotide sugar metabolism";"GDP-L-fucose biosynthesis I (from GDP-D-mannose)" ID=BGER025663-PA|Name=BGER025663-PA 1 Reactome: R-HSA-428890 "Role of ABL in ROBO-SLIT signaling" ID=BGER011573-PA|Name=BGER011573-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER018340-PA|Name=BGER018340-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" ID=BGER009416-PA|Name=BGER009416-PA 5 Reactome: R-HSA-211976;Reactome: R-HSA-1989781;Reactome: R-HSA-8937144;Reactome: R-HSA-211945;Reactome: R-HSA-211981 "Endogenous sterols";"PPARA activates gene expression";"Aryl hydrocarbon receptor signalling";"Phase I - Functionalization of compounds";"Xenobiotics" ID=BGER022482-PA|Name=BGER022482-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER021816-PA|Name=BGER021816-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER022630-PA|Name=BGER022630-PA 2 Reactome: R-HSA-983231;Reactome: R-HSA-5205685 "Factors involved in megakaryocyte development and platelet production";"Pink/Parkin Mediated Mitophagy" ID=BGER014322-PA|Name=BGER014322-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" ID=BGER017305-PA|Name=BGER017305-PA 5 Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6782210;Reactome: R-HSA-72163;Reactome: R-HSA-6781823 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"mRNA Splicing - Major Pathway";"Formation of TC-NER Pre-Incision Complex" ID=BGER027395-PA|Name=BGER027395-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER003446-PA|Name=BGER003446-PA 1 Reactome: R-HSA-2428928 "IRS-related events triggered by IGF1R" ID=BGER028153-PA|Name=BGER028153-PA 2 Reactome: R-HSA-1433557;KEGG: 04660+2.7.10.2 "Signaling by SCF-KIT";"T cell receptor signaling pathway" ID=BGER021673-PA|Name=BGER021673-PA 8 MetaCyc: PWY-7922;Reactome: R-HSA-5083629;MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109;MetaCyc: PWY-7979;Reactome: R-HSA-5083633;KEGG: 00514+2.4.1.109;Reactome: R-HSA-5173105 "Protein O-mannosylation II (mammals, core M1 and core M2)";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1";"Other types of O-glycan biosynthesis";"O-linked glycosylation" ID=BGER015681-PA|Name=BGER015681-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER004316-PA|Name=BGER004316-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER020349-PA|Name=BGER020349-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023944-PA|Name=BGER023944-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER011775-PA|Name=BGER011775-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER015852-PA|Name=BGER015852-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER029542-PA|Name=BGER029542-PA 3 Reactome: R-HSA-1614603;Reactome: R-HSA-2408508;Reactome: R-HSA-1614558 "Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se";"Degradation of cysteine and homocysteine" ID=BGER010074-PA|Name=BGER010074-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER006188-PA|Name=BGER006188-PA 6 MetaCyc: PWY-5723;Reactome: R-HSA-71336;KEGG: 00040+5.1.3.1;KEGG: 00710+5.1.3.1;MetaCyc: PWY-1861;KEGG: 00030+5.1.3.1 "Rubisco shunt";"Pentose phosphate pathway";"Pentose and glucuronate interconversions";"Carbon fixation in photosynthetic organisms";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Pentose phosphate pathway" ID=BGER004210-PA|Name=BGER004210-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER005687-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER008885-PA|Name=BGER008885-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" ID=BGER008641-PA|Name=BGER008641-PA 1 Reactome: R-HSA-6807878 "COPI-mediated anterograde transport" ID=BGER014624-PA|Name=BGER014624-PA 6 Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-975957;Reactome: R-HSA-9010553;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" ID=BGER027198-PA|Name=BGER027198-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689 "Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits" ID=BGER017166-PA|Name=BGER017166-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER028318-PA|Name=BGER028318-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER010377-PA|Name=BGER010377-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER014513-PA|Name=BGER014513-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-71403 "Mitochondrial protein import";"Citric acid cycle (TCA cycle)" ID=BGER013698-PA|Name=BGER013698-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER002285-PA|Name=BGER002285-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER018227-PA|Name=BGER018227-PA 2 Reactome: R-HSA-1296072;Reactome: R-HSA-983231 "Voltage gated Potassium channels";"Factors involved in megakaryocyte development and platelet production" ID=BGER010032-PA|Name=BGER010032-PA 2 KEGG: 00062+3.1.2.22;Reactome: R-HSA-75105 "Fatty acid elongation";"Fatty acyl-CoA biosynthesis" ID=BGER024015-PA|Name=BGER024015-PA 19 KEGG: 00630+1.1.1.37;KEGG: 00020+1.1.1.37;KEGG: 00270+1.1.1.37;KEGG: 00680+1.1.1.37;MetaCyc: PWY-6728;MetaCyc: PWY-7383;MetaCyc: PWY-5913;Reactome: R-HSA-70263;Reactome: R-HSA-71403;KEGG: 00710+1.1.1.37;MetaCyc: PWY-8086;MetaCyc: PWY-5690;MetaCyc: PWY-7115;KEGG: 00620+1.1.1.37;KEGG: 00720+1.1.1.37;MetaCyc: PWY-561;MetaCyc: PWY-1622;MetaCyc: PWY-5392;MetaCyc: PWY-6969 "Glyoxylate and dicarboxylate metabolism";"Citrate cycle (TCA cycle)";"Cysteine and methionine metabolism";"Methane metabolism";"Methylaspartate cycle";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Gluconeogenesis";"Citric acid cycle (TCA cycle)";"Carbon fixation in photosynthetic organisms";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"TCA cycle II (plants and fungi)";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Pyruvate metabolism";"Carbon fixation pathways in prokaryotes";"Superpathway of glyoxylate cycle and fatty acid degradation";"Formaldehyde assimilation I (serine pathway)";"Reductive TCA cycle II";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)" ID=BGER007588-PA|Name=BGER007588-PA 8 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-6791226;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Major pathway of rRNA processing in the nucleolus and cytosol";"mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway" ID=BGER028531-PA|Name=BGER028531-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER004028-PA|Name=BGER004028-PA 1 Reactome: R-HSA-418990 "Adherens junctions interactions" ID=BGER029762-PA|Name=BGER029762-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017921-PA|Name=BGER017921-PA 16 Reactome: R-HSA-5693571;Reactome: R-HSA-5693579;Reactome: R-HSA-5693607;Reactome: R-HSA-5693554;Reactome: R-HSA-5693548;Reactome: R-HSA-201722;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-69473;Reactome: R-HSA-9018519;Reactome: R-HSA-6804756;Reactome: R-HSA-2559586;Reactome: R-HSA-5693565;Reactome: R-HSA-3214847 "Nonhomologous End-Joining (NHEJ)";"Homologous DNA Pairing and Strand Exchange";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Sensing of DNA Double Strand Breaks";"Formation of the beta-catenin:TCF transactivating complex";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"G2/M DNA damage checkpoint";"Estrogen-dependent gene expression";"Regulation of TP53 Activity through Phosphorylation";"DNA Damage/Telomere Stress Induced Senescence";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"HATs acetylate histones" ID=BGER013394-PA|Name=BGER013394-PA 2 KEGG: 00970+6.1.1.20;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" ID=BGER025702-PA|Name=BGER025702-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" ID=BGER000201-PA|Name=BGER000201-PA 3 KEGG: 00670+2.1.2.9;KEGG: 00970+2.1.2.9;Reactome: R-HSA-5368286 "One carbon pool by folate";"Aminoacyl-tRNA biosynthesis";"Mitochondrial translation initiation" ID=BGER019302-PA|Name=BGER019302-PA 1 Reactome: R-HSA-5610787 "Hedgehog 'off' state" ID=BGER007613-PA|Name=BGER007613-PA 1 Reactome: R-HSA-75153 "Apoptotic execution phase" ID=BGER016442-PA|Name=BGER016442-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012940-PA|Name=BGER012940-PA 42 Reactome: R-HSA-1912408;Reactome: R-HSA-73728;Reactome: R-HSA-2559582;Reactome: R-HSA-5617472;Reactome: R-HSA-5693607;Reactome: R-HSA-5693571;Reactome: R-HSA-427389;Reactome: R-HSA-8939236;Reactome: R-HSA-110329;Reactome: R-HSA-201722;Reactome: R-HSA-110328;Reactome: R-HSA-9018519;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-69473;Reactome: R-HSA-3214858;Reactome: R-HSA-212300;Reactome: R-HSA-912446;Reactome: R-HSA-5693565;Reactome: R-HSA-3214847;Reactome: R-HSA-2559586;Reactome: R-HSA-110331;Reactome: R-HSA-73772;Reactome: R-HSA-5334118;Reactome: R-HSA-4551638;Reactome: R-HSA-3214841;Reactome: R-HSA-427359;Reactome: R-HSA-977225;Reactome: R-HSA-3214842;Reactome: R-HSA-2299718;Reactome: R-HSA-9610379;Reactome: R-HSA-606279;Reactome: R-HSA-3214815;Reactome: R-HSA-9616222;Reactome: R-HSA-427413;Reactome: R-HSA-110330;Reactome: R-HSA-5625886;Reactome: R-HSA-8936459;Reactome: R-HSA-2559580;Reactome: R-HSA-5250924;Reactome: R-HSA-5578749;Reactome: R-HSA-1221632 "Pre-NOTCH Transcription and Translation";"RNA Polymerase I Promoter Opening";"Senescence-Associated Secretory Phenotype (SASP)";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Processing of DNA double-strand break ends";"Nonhomologous End-Joining (NHEJ)";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cleavage of the damaged pyrimidine";"Formation of the beta-catenin:TCF transactivating complex";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Estrogen-dependent gene expression";"Packaging Of Telomere Ends";"HCMV Early Events";"G2/M DNA damage checkpoint";"RMTs methylate histone arginines";"PRC2 methylates histones and DNA";"Meiotic recombination";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"HATs acetylate histones";"DNA Damage/Telomere Stress Induced Senescence";"Cleavage of the damaged purine";"RNA Polymerase I Promoter Escape";"DNA methylation";"SUMOylation of chromatin organization proteins";"PKMTs methylate histone lysines";"SIRT1 negatively regulates rRNA expression";"Amyloid fiber formation";"HDMs demethylate histones";"Condensation of Prophase Chromosomes";"HCMV Late Events";"Deposition of new CENPA-containing nucleosomes at the centromere";"HDACs deacetylate histones";"Transcriptional regulation of granulopoiesis";"NoRC negatively regulates rRNA expression";"Recognition and association of DNA glycosylase with site containing an affected purine";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Oxidative Stress Induced Senescence";"B-WICH complex positively regulates rRNA expression";"Transcriptional regulation by small RNAs";"Meiotic synapsis" ID=BGER009730-PA|Name=BGER009730-PA 9 KEGG: 00513+3.2.1.52;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822;MetaCyc: PWY-6902;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;KEGG: 00531+3.2.1.52 "Various types of N-glycan biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)";"Chitin degradation II (Vibrio)";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"Glycosaminoglycan degradation" ID=BGER004940-PA|Name=BGER004940-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER016656-PA|Name=BGER016656-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER027874-PA|Name=BGER027874-PA 3 Reactome: R-HSA-983168;Reactome: R-HSA-1358803;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Downregulation of ERBB2:ERBB3 signaling";"Protein ubiquitination" ID=BGER014144-PA|Name=BGER014144-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" ID=BGER013522-PA|Name=BGER013522-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER025361-PA|Name=BGER025361-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER016635-PA|Name=BGER016635-PA 7 MetaCyc: PWY-6367;KEGG: 00562+3.1.4.11;MetaCyc: PWY-8052;KEGG: 04070+3.1.4.11;MetaCyc: PWY-7039;MetaCyc: PWY-6351;Reactome: R-HSA-1855204 "D-myo-inositol-5-phosphate metabolism";"Inositol phosphate metabolism";"2-arachidonoylglycerol biosynthesis";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol" ID=BGER016854-PA|Name=BGER016854-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER010994-PA|Name=BGER010994-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER027236-PA|Name=BGER027236-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER003116-PA|Name=BGER003116-PA 5 Reactome: R-HSA-5620924;Reactome: R-HSA-6811434;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-2132295 "Intraflagellar transport";"COPI-dependent Golgi-to-ER retrograde traffic";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"MHC class II antigen presentation" ID=BGER027627-PA|Name=BGER027627-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER002429-PA|Name=BGER002429-PA 3 Reactome: R-HSA-5696394;Reactome: R-HSA-3108214;Reactome: R-HSA-5696395 "DNA Damage Recognition in GG-NER";"SUMOylation of DNA damage response and repair proteins";"Formation of Incision Complex in GG-NER" ID=BGER016495-PA|Name=BGER016495-PA 3 Reactome: R-HSA-159230;Reactome: R-HSA-77588;Reactome: R-HSA-73856 "Transport of the SLBP Dependant Mature mRNA";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"RNA Polymerase II Transcription Termination" ID=BGER019251-PA|Name=BGER019251-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER009076-PA|Name=BGER009076-PA 4 Reactome: R-HSA-8874081;Reactome: R-HSA-3000178;Reactome: R-HSA-3000171;Reactome: R-HSA-3000157 "MET activates PTK2 signaling";"ECM proteoglycans";"Non-integrin membrane-ECM interactions";"Laminin interactions" ID=BGER016258-PA|Name=BGER016258-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026695-PA|Name=BGER026695-PA 1 Reactome: R-HSA-4551638 "SUMOylation of chromatin organization proteins" ID=BGER023782-PA|Name=BGER023782-PA 1 KEGG: 04660+2.7.10.2 "T cell receptor signaling pathway" ID=BGER001276-PA|Name=BGER001276-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-159236 "RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER017459-PA|Name=BGER017459-PA 3 KEGG: 00643+3.7.1.2;Reactome: R-HSA-8963684;KEGG: 00350+3.7.1.2 "Styrene degradation";"Tyrosine catabolism";"Tyrosine metabolism" ID=BGER021602-PA|Name=BGER021602-PA 2 Reactome: R-HSA-392154;Reactome: R-HSA-1222556 "Nitric oxide stimulates guanylate cyclase";"ROS and RNS production in phagocytes" ID=BGER005075-PA|Name=BGER005075-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER003797-PA|Name=BGER003797-PA 5 Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-1222556;Reactome: R-HSA-77387 "Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Ion channel transport";"ROS and RNS production in phagocytes";"Insulin receptor recycling" ID=BGER010351-PA|Name=BGER010351-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-8856825;Reactome: R-HSA-6781823;Reactome: R-HSA-8951664 "DNA Damage Recognition in GG-NER";"Cargo recognition for clathrin-mediated endocytosis";"Formation of TC-NER Pre-Incision Complex";"Neddylation" ID=BGER008302-PA|Name=BGER008302-PA 7 Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-2691232;Reactome: R-HSA-177929;Reactome: R-HSA-2660826;Reactome: R-HSA-1442490;Reactome: R-HSA-2122948 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Signaling by EGFR";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Collagen degradation";"Activated NOTCH1 Transmits Signal to the Nucleus" ID=BGER010359-PA|Name=BGER010359-PA 56 Reactome: R-HSA-382556;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-69601;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902 "ABC-family proteins mediated transport";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity" ID=BGER009019-PA|Name=BGER009019-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" ID=BGER021126-PA|Name=BGER021126-PA 4 Reactome: R-HSA-3065678;Reactome: R-HSA-3065676;Reactome: R-HSA-983168;MetaCyc: PWY-7511 "SUMO is transferred from E1 to E2 (UBE2I, UBC9)";"SUMO is conjugated to E1 (UBA2:SAE1)";"Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER017796-PA|Name=BGER017796-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER025629-PA|Name=BGER025629-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER023635-PA|Name=BGER023635-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER019196-PA|Name=BGER019196-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER024459-PA|Name=BGER024459-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER006239-PA|Name=BGER006239-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-381340;Reactome: R-HSA-212436 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation";"Generic Transcription Pathway" ID=BGER018959-PA|Name=BGER018959-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-7782;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax esters biosynthesis I";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER006571-PA|Name=BGER006571-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" ID=BGER010125-PA|Name=BGER010125-PA 1 Reactome: R-HSA-5689877 "Josephin domain DUBs" ID=BGER005420-PA|Name=BGER005420-PA 2 Reactome: R-HSA-446203;Reactome: R-HSA-1799339 "Asparagine N-linked glycosylation";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER006319-PA|Name=BGER006319-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER015792-PA|Name=BGER015792-PA 3 Reactome: R-HSA-5358493;MetaCyc: PWY-7546;MetaCyc: PWY-6482 "Synthesis of diphthamide-EEF2";"Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)" ID=BGER026759-PA|Name=BGER026759-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER029555-PA|Name=BGER029555-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "VEGFA-VEGFR2 Pathway";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER006777-PA|Name=BGER006777-PA 57 Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-195253;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5610783;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761 "Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of beta-catenin by the destruction complex";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Neutrophil degranulation";"Degradation of AXIN";"Separation of Sister Chromatids";"Degradation of GLI2 by the proteasome";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling" ID=BGER024790-PA|Name=BGER024790-PA 7 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER001848-PA|Name=BGER001848-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" ID=BGER018589-PA|Name=BGER018589-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Amino acids regulate mTORC1";"Ion channel transport";"Transferrin endocytosis and recycling";"Insulin receptor recycling" ID=BGER001810-PA|Name=BGER001810-PA 3 Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-110320 "Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH" ID=BGER026635-PA|Name=BGER026635-PA 19 Reactome: R-HSA-163765;KEGG: 00660+6.2.1.5;KEGG: 00020+6.2.1.5;KEGG: 00720+2.3.3.8;MetaCyc: PWY-5913;MetaCyc: PWY-6728;MetaCyc: PWY-5172;MetaCyc: PWY-5538;Reactome: R-HSA-71403;Reactome: R-HSA-6798695;MetaCyc: PWY-7384;MetaCyc: PWY-5690;MetaCyc: PWY-5537;KEGG: 00720+6.2.1.5;Reactome: R-HSA-75105;KEGG: 00020+2.3.3.8;KEGG: 00640+6.2.1.5;MetaCyc: PWY-6969;MetaCyc: PWY-5392 "ChREBP activates metabolic gene expression";"C5-Branched dibasic acid metabolism";"Citrate cycle (TCA cycle)";"Carbon fixation pathways in prokaryotes";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle";"Acetyl-coa biosynthesis III (from citrate)";"Pyruvate fermentation to acetate VI";"Citric acid cycle (TCA cycle)";"Neutrophil degranulation";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"TCA cycle II (plants and fungi)";"Pyruvate fermentation to acetate V";"Carbon fixation pathways in prokaryotes";"Fatty acyl-CoA biosynthesis";"Citrate cycle (TCA cycle)";"Propanoate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II" ID=BGER021898-PA|Name=BGER021898-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER022099-PA|Name=BGER022099-PA 1 Reactome: R-HSA-264876 "Insulin processing" ID=BGER002004-PA|Name=BGER002004-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" ID=BGER003947-PA|Name=BGER003947-PA 17 MetaCyc: PWY-7184;MetaCyc: PWY-7222;MetaCyc: PWY-7176;MetaCyc: PWY-6545;MetaCyc: PWY-7221;MetaCyc: PWY-7220;MetaCyc: PWY-7198;MetaCyc: PWY-7226;MetaCyc: PWY-7227;KEGG: 00240+2.7.4.6;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7205;MetaCyc: PWY-7210;MetaCyc: PWY-7197;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7224;MetaCyc: PWY-7187 "Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Guanosine deoxyribonucleotides de novo biosynthesis II";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine ribonucleotides de novo biosynthesis";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis";"Pyrimidine metabolism";"Purine metabolism";"CMP phosphorylation";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotide phosphorylation";"Drug metabolism - other enzymes";"Purine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotides de novo biosynthesis II" ID=BGER022863-PA|Name=BGER022863-PA 6 Reactome: R-HSA-73772;Reactome: R-HSA-5250924;Reactome: R-HSA-427413;Reactome: R-HSA-73762;Reactome: R-HSA-427359;Reactome: R-HSA-73863 "RNA Polymerase I Promoter Escape";"B-WICH complex positively regulates rRNA expression";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Transcription Initiation";"SIRT1 negatively regulates rRNA expression";"RNA Polymerase I Transcription Termination" ID=BGER011751-PA|Name=BGER011751-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" ID=BGER009677-PA|Name=BGER009677-PA 9 Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-5696394;Reactome: R-HSA-6781827;Reactome: R-HSA-8951664;Reactome: R-HSA-5696400;Reactome: R-HSA-5696395 "Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"DNA Damage Recognition in GG-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Neddylation";"Dual Incision in GG-NER";"Formation of Incision Complex in GG-NER" ID=BGER029939-PA|Name=BGER029939-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER009434-PA|Name=BGER009434-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" ID=BGER026681-PA|Name=BGER026681-PA 1 Reactome: R-HSA-6807878 "COPI-mediated anterograde transport" ID=BGER010618-PA|Name=BGER010618-PA 1 Reactome: R-HSA-5221030 "TET1,2,3 and TDG demethylate DNA" ID=BGER021832-PA|Name=BGER021832-PA 44 Reactome: R-HSA-5654727;Reactome: R-HSA-2559585;Reactome: R-HSA-5674135;Reactome: R-HSA-162658;Reactome: R-HSA-982772;Reactome: R-HSA-456926;Reactome: R-HSA-445144;Reactome: R-HSA-5668599;Reactome: R-HSA-6802948;Reactome: R-HSA-879415;KEGG: 04150+2.7.11.24;Reactome: R-HSA-112409;Reactome: R-HSA-5674499;Reactome: R-HSA-170968;Reactome: R-HSA-9634638;Reactome: R-HSA-9627069;Reactome: R-HSA-9649948;Reactome: R-HSA-8943724;Reactome: R-HSA-198753;Reactome: R-HSA-2871796;Reactome: R-HSA-881907;Reactome: R-HSA-5654733;Reactome: R-HSA-8940973;Reactome: R-HSA-2559582;Reactome: R-HSA-6802946;Reactome: R-HSA-74749;Reactome: R-HSA-5654726;Reactome: R-HSA-444257;Reactome: R-HSA-2559580;Reactome: R-HSA-5663213;Reactome: R-HSA-3371453;Reactome: R-HSA-6802952;Reactome: R-HSA-5673001;Reactome: R-HSA-5675221;Reactome: R-HSA-6802955;Reactome: R-HSA-2029482;Reactome: R-HSA-375165;Reactome: R-HSA-1295596;Reactome: R-HSA-5654732;Reactome: R-HSA-450341;Reactome: R-HSA-6811558;Reactome: R-HSA-9635465;Reactome: R-HSA-8939211;Reactome: R-HSA-202670 "Negative regulation of FGFR2 signaling";"Oncogene Induced Senescence";"MAP2K and MAPK activation";"Golgi Cisternae Pericentriolar Stack Reorganization";"Growth hormone receptor signaling";"Thrombin signalling through proteinase activated receptors (PARs)";"Signal transduction by L1";"RHO GTPases Activate NADPH Oxidases";"Signaling by high-kinase activity BRAF mutants";"Advanced glycosylation endproduct receptor signaling";"mTOR signaling pathway";"RAF-independent MAPK1/3 activation";"Negative feedback regulation of MAPK pathway";"Frs2-mediated activation";"Estrogen-dependent nuclear events downstream of ESR-membrane signaling";"Regulation of the apoptosome activity";"Signaling downstream of RAS mutants";"Regulation of PTEN gene transcription";"ERK/MAPK targets";"FCERI mediated MAPK activation";"Gastrin-CREB signalling pathway via PKC and MAPK";"Negative regulation of FGFR4 signaling";"RUNX2 regulates osteoblast differentiation";"Senescence-Associated Secretory Phenotype (SASP)";"Signaling by moderate kinase activity BRAF mutants";"Signal attenuation";"Negative regulation of FGFR1 signaling";"RSK activation";"Oxidative Stress Induced Senescence";"RHO GTPases Activate WASPs and WAVEs";"Regulation of HSF1-mediated heat shock response";"Signaling by BRAF and RAF fusions";"RAF/MAP kinase cascade";"Negative regulation of MAPK pathway";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Regulation of actin dynamics for phagocytic cup formation";"NCAM signaling for neurite out-growth";"Spry regulation of FGF signaling";"Negative regulation of FGFR3 signaling";"Activation of the AP-1 family of transcription factors";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Suppression of apoptosis";"ESR-mediated signaling";"ERKs are inactivated" ID=BGER020512-PA|Name=BGER020512-PA 3 Reactome: R-HSA-9033241;Reactome: R-HSA-9603798;Reactome: R-HSA-8866654 "Peroxisomal protein import";"Class I peroxisomal membrane protein import";"E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER023642-PA|Name=BGER023642-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER028143-PA|Name=BGER028143-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-445095 "Phase 0 - rapid depolarisation";"Interaction between L1 and Ankyrins" ID=BGER016180-PA|Name=BGER016180-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017206-PA|Name=BGER017206-PA 12 Reactome: R-HSA-73762;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-76071;Reactome: R-HSA-73780;Reactome: R-HSA-427413;Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-1834949;Reactome: R-HSA-5250924;Reactome: R-HSA-749476 "RNA Polymerase I Transcription Initiation";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Chain Elongation";"NoRC negatively regulates rRNA expression";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"Cytosolic sensors of pathogen-associated DNA";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER003680-PA|Name=BGER003680-PA 1 Reactome: R-HSA-1368108 "BMAL1:CLOCK,NPAS2 activates circadian gene expression" ID=BGER006776-PA|Name=BGER006776-PA 4 Reactome: R-HSA-5656169;Reactome: R-HSA-110312;Reactome: R-HSA-5656121;Reactome: R-HSA-5655862 "Termination of translesion DNA synthesis";"Translesion synthesis by REV1";"Translesion synthesis by POLI";"Translesion synthesis by POLK" ID=BGER000471-PA|Name=BGER000471-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER007110-PA|Name=BGER007110-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER026488-PA|Name=BGER026488-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER027577-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER001471-PA|Name=BGER001471-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" ID=BGER001373-PA|Name=BGER001373-PA 5 Reactome: R-HSA-72165;Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-159236 "mRNA Splicing - Minor Pathway";"RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER025930-PA|Name=BGER025930-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-71403 "Mitochondrial protein import";"Citric acid cycle (TCA cycle)" ID=BGER012970-PA|Name=BGER012970-PA 7 Reactome: R-HSA-5083628;Reactome: R-HSA-5083629;Reactome: R-HSA-3000171;Reactome: R-HSA-3000178;Reactome: R-HSA-5173105;Reactome: R-HSA-9010553;Reactome: R-HSA-5083633 "Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Non-integrin membrane-ECM interactions";"ECM proteoglycans";"O-linked glycosylation";"Regulation of expression of SLITs and ROBOs";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1" ID=BGER027488-PA|Name=BGER027488-PA 2 Reactome: R-HSA-1237112;Reactome: R-HSA-8950505 "Methionine salvage pathway";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" ID=BGER028246-PA|Name=BGER028246-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER001320-PA|Name=BGER001320-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823 "Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation" ID=BGER013225-PA|Name=BGER013225-PA 30 Reactome: R-HSA-8939902;Reactome: R-HSA-68949;Reactome: R-HSA-187577;Reactome: R-HSA-2565942;Reactome: R-HSA-2122947;Reactome: R-HSA-1170546;Reactome: R-HSA-195253;Reactome: R-HSA-5610780;Reactome: R-HSA-2894862;Reactome: R-HSA-400253;Reactome: R-HSA-9604323;Reactome: R-HSA-2644606;Reactome: R-HSA-5610785;Reactome: R-HSA-8951664;Reactome: R-HSA-174113;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-69231;Reactome: R-HSA-983168;Reactome: R-HSA-917937;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-5684264;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-5607761;Reactome: R-HSA-8854050;Reactome: R-HSA-5610783;Reactome: R-HSA-2871837;Reactome: R-HSA-2644607 "Regulation of RUNX2 expression and activity";"Orc1 removal from chromatin";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of PLK1 Activity at G2/M Transition";"NOTCH1 Intracellular Domain Regulates Transcription";"Prolactin receptor signaling";"Degradation of beta-catenin by the destruction complex";"Degradation of GLI1 by the proteasome";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Circadian Clock";"Negative regulation of NOTCH4 signaling";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"GLI3 is processed to GLI3R by the proteasome";"Neddylation";"SCF-beta-TrCP mediated degradation of Emi1";"Interleukin-1 signaling";"Downstream TCR signaling";"Cyclin D associated events in G1";"Antigen processing: Ubiquitination & Proteasome degradation";"Iron uptake and transport";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"Dectin-1 mediated noncanonical NF-kB signaling";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Degradation of GLI2 by the proteasome";"FCERI mediated NF-kB activation";"Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling" ID=BGER025758-PA|Name=BGER025758-PA 1 Reactome: R-HSA-2299718 "Condensation of Prophase Chromosomes" ID=BGER012618-PA|Name=BGER012618-PA 7 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER012129-PA|Name=BGER012129-PA 7 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER021945-PA|Name=BGER021945-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER018678-PA|Name=BGER018678-PA 52 Reactome: R-HSA-75953;Reactome: R-HSA-73780;Reactome: R-HSA-6781827;Reactome: R-HSA-75955;Reactome: R-HSA-9018519;Reactome: R-HSA-76071;Reactome: R-HSA-73762;Reactome: R-HSA-8851708;Reactome: R-HSA-203927;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-1834949;Reactome: R-HSA-76061;Reactome: R-HSA-112382;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-749476;Reactome: R-HSA-6781823;Reactome: R-HSA-73980;Reactome: R-HSA-6782210;Reactome: R-HSA-113418;Reactome: R-HSA-5601884;Reactome: R-HSA-427413;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-72165;Reactome: R-HSA-5250924;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-5578749;Reactome: R-HSA-167161;Reactome: R-HSA-167290;Reactome: R-HSA-73772;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-73863;Reactome: R-HSA-167172;Reactome: R-HSA-76066;Reactome: R-HSA-167243;Reactome: R-HSA-6803529 "RNA Polymerase II Transcription Initiation";"RNA Polymerase III Chain Elongation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Elongation";"Estrogen-dependent gene expression";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase I Transcription Initiation";"Signaling by FGFR2 IIIa TM";"MicroRNA (miRNA) biogenesis";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Formation of RNA Pol II elongation complex";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA Polymerase III Abortive And Retractive Initiation";"Formation of TC-NER Pre-Incision Complex";"RNA Polymerase III Transcription Termination";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of the Early Elongation Complex";"PIWI-interacting RNA (piRNA) biogenesis";"NoRC negatively regulates rRNA expression";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Transcriptional regulation by small RNAs";"HIV Transcription Initiation";"Pausing and recovery of HIV elongation";"RNA Polymerase I Promoter Escape";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"RNA Polymerase I Transcription Termination";"Transcription of the HIV genome";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing" ID=BGER022079-PA|Name=BGER022079-PA 14 MetaCyc: PWY-8051;MetaCyc: PWY-7411;MetaCyc: PWY-7782;MetaCyc: PWY-6453;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7589;MetaCyc: PWY-7417;MetaCyc: PWY-8053;KEGG: 00564+2.3.1.51;Reactome: R-HSA-1483166;MetaCyc: PWY-8055;MetaCyc: PWY-5667;MetaCyc: PWY-5981;MetaCyc: PWY-7587 "Anandamide biosynthesis I";"Phosphatidate biosynthesis (yeast)";"Plasmalogen biosynthesis";"Stigma estolide biosynthesis";"Glycerolipid metabolism";"Palmitoleate biosynthesis III (cyanobacteria)";"Phospholipid remodeling (phosphatidate, yeast)";"Anandamide biosynthesis II";"Glycerophospholipid metabolism";"Synthesis of PA";"Palmitoyl ethanolamide biosynthesis";"CDP-diacylglycerol biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)" ID=BGER022994-PA|Name=BGER022994-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER004397-PA|Name=BGER004397-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" ID=BGER003332-PA|Name=BGER003332-PA 3 KEGG: 00310+2.1.1.60;Reactome: R-HSA-2514859;Reactome: R-HSA-8876725 "Lysine degradation";"Inactivation, recovery and regulation of the phototransduction cascade";"Protein methylation" ID=BGER015793-PA|Name=BGER015793-PA 3 MetaCyc: PWY-6482;MetaCyc: PWY-7546;Reactome: R-HSA-5358493 "Diphthamide biosynthesis I (archaea)";"Diphthamide biosynthesis II (eukaryotes)";"Synthesis of diphthamide-EEF2" ID=BGER022603-PA|Name=BGER022603-PA 5 Reactome: R-HSA-72165;Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway" ID=BGER019948-PA|Name=BGER019948-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER000798-PA|Name=BGER000798-PA 3 Reactome: R-HSA-5423646;MetaCyc: PWY-7533;Reactome: R-HSA-2142691 "Aflatoxin activation and detoxification";"Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" ID=BGER022475-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER017874-PA|Name=BGER017874-PA 1 Reactome: R-HSA-6811438 "Intra-Golgi traffic" ID=BGER015111-PA|Name=BGER015111-PA 1 Reactome: R-HSA-196836 "Vitamin C (ascorbate) metabolism" ID=BGER001677-PA|Name=BGER001677-PA 5 Reactome: R-HSA-6782135;Reactome: R-HSA-6781827;Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210 "Dual incision in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER" ID=BGER018087-PA|Name=BGER018087-PA 5 Reactome: R-HSA-8951664;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-6781827;Reactome: R-HSA-6782135 "Neddylation";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER" ID=BGER026226-PA|Name=BGER026226-PA 1 Reactome: R-HSA-8876725 "Protein methylation" ID=BGER017010-PA|Name=BGER017010-PA 2 Reactome: R-HSA-3928665;Reactome: R-HSA-2682334 "EPH-ephrin mediated repulsion of cells";"EPH-Ephrin signaling" ID=BGER022740-PA|Name=BGER022740-PA 2 Reactome: R-HSA-71240;KEGG: 00380+1.13.11.11 "Tryptophan catabolism";"Tryptophan metabolism" ID=BGER018005-PA|Name=BGER018005-PA 1 KEGG: 04660+2.7.10.2 "T cell receptor signaling pathway" ID=BGER006054-PA|Name=BGER006054-PA 11 MetaCyc: PWY-5381;MetaCyc: PWY-5695;MetaCyc: PWY-7821;KEGG: 00240+3.1.3.5;MetaCyc: PWY-7185;MetaCyc: PWY-6607;KEGG: 00230+3.1.3.5;MetaCyc: PWY-6606;KEGG: 00760+3.1.3.5;MetaCyc: PWY-6596;MetaCyc: PWY-6608 "Pyridine nucleotide cycling (plants)";"Inosine 5'-phosphate degradation";"Tunicamycin biosynthesis";"Pyrimidine metabolism";"UTP and CTP dephosphorylation I";"Guanosine nucleotides degradation I";"Purine metabolism";"Guanosine nucleotides degradation II";"Nicotinate and nicotinamide metabolism";"Adenosine nucleotides degradation I";"Guanosine nucleotides degradation III" ID=BGER027057-PA|Name=BGER027057-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER003249-PA|Name=BGER003249-PA 3 Reactome: R-HSA-5632928;Reactome: R-HSA-5632968;Reactome: R-HSA-5358565 "Defective Mismatch Repair Associated With MSH2";"Defective Mismatch Repair Associated With MSH6";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)" ID=BGER000461-PA|Name=BGER000461-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER017750-PA|Name=BGER017750-PA 2 KEGG: 00561+2.3.1.20;KEGG: 00073+2.3.1.20 "Glycerolipid metabolism";"Cutin, suberine and wax biosynthesis" ID=BGER020170-PA|Name=BGER020170-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER025149-PA|Name=BGER025149-PA 16 Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689 "Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits" ID=BGER000918-PA|Name=BGER000918-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER014200-PA|Name=BGER014200-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-8849473 "Major pathway of rRNA processing in the nucleolus and cytosol";"PTK6 Expression" ID=BGER011425-PA|Name=BGER011425-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER024322-PA|Name=BGER024322-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" ID=BGER018137-PA|Name=BGER018137-PA 2 Reactome: R-HSA-8856825;Reactome: R-HSA-8856828 "Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis" ID=BGER028480-PA|Name=BGER028480-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012874-PA|Name=BGER012874-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER019825-PA|Name=BGER019825-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER017764-PA|Name=BGER017764-PA 1 MetaCyc: PWY-7379 "Mrna capping II" ID=BGER011964-PA|Name=BGER011964-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-71403 "Mitochondrial protein import";"Citric acid cycle (TCA cycle)" ID=BGER020346-PA|Name=BGER020346-PA 5 Reactome: R-HSA-983168;Reactome: R-HSA-5205685;Reactome: R-HSA-5689877;Reactome: R-HSA-977225;Reactome: R-HSA-9646399 "Antigen processing: Ubiquitination & Proteasome degradation";"Pink/Parkin Mediated Mitophagy";"Josephin domain DUBs";"Amyloid fiber formation";"Aggrephagy" ID=BGER009337-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER003416-PA|Name=BGER003416-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER004139-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER011637-PA|Name=BGER011637-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" ID=BGER027285-PA|Name=BGER027285-PA 2 Reactome: R-HSA-5619039;Reactome: R-HSA-426117 "Defective SLC12A6 causes agenesis of the corpus callosum, with peripheral neuropathy (ACCPN)";"Cation-coupled Chloride cotransporters" ID=BGER011517-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER029936-PA|Name=BGER029936-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER029236-PA|Name=BGER029236-PA 2 Reactome: R-HSA-2142700;Reactome: R-HSA-2142691 "Synthesis of Lipoxins (LX)";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" ID=BGER010410-PA|Name=BGER010410-PA 3 MetaCyc: PWY-6823;Reactome: R-HSA-947581;KEGG: 00790+4.1.99.22 "Molybdenum cofactor biosynthesis";"Molybdenum cofactor biosynthesis";"Folate biosynthesis" ID=BGER000473-PA|Name=BGER000473-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" ID=BGER023760-PA|Name=BGER023760-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER019333-PA|Name=BGER019333-PA 3 Reactome: R-HSA-416482;Reactome: R-HSA-194840;Reactome: R-HSA-193648 "G alpha (12/13) signalling events";"Rho GTPase cycle";"NRAGE signals death through JNK" ID=BGER017332-PA|Name=BGER017332-PA 5 Reactome: R-HSA-69473;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-5689901;Reactome: R-HSA-5693571 "G2/M DNA damage checkpoint";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Metalloprotease DUBs";"Nonhomologous End-Joining (NHEJ)" ID=BGER010751-PA|Name=BGER010751-PA 2 KEGG: 00480+1.11.1.15;Reactome: R-HSA-3299685 "Glutathione metabolism";"Detoxification of Reactive Oxygen Species" ID=BGER007568-PA|Name=BGER007568-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER005783-PA|Name=BGER005783-PA 2 Reactome: R-HSA-5250971;Reactome: R-HSA-5682910 "Toxicity of botulinum toxin type C (BoNT/C)";"LGI-ADAM interactions" ID=BGER011613-PA|Name=BGER011613-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER025057-PA|Name=BGER025057-PA 1 Reactome: R-HSA-8963693 "Aspartate and asparagine metabolism" ID=BGER026725-PA|Name=BGER026725-PA 1 Reactome: R-HSA-162658 "Golgi Cisternae Pericentriolar Stack Reorganization" ID=BGER011595-PA|Name=BGER011595-PA 3 Reactome: R-HSA-191859;Reactome: R-HSA-72163;Reactome: R-HSA-72165 "snRNP Assembly";"mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" ID=BGER027996-PA|Name=BGER027996-PA 3 Reactome: R-HSA-6794361;Reactome: R-HSA-6798695;Reactome: R-HSA-264870 "Neurexins and neuroligins";"Neutrophil degranulation";"Caspase-mediated cleavage of cytoskeletal proteins" ID=BGER020808-PA|Name=BGER020808-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER012261-PA|Name=BGER012261-PA 1 Reactome: R-HSA-9037629 "Lewis blood group biosynthesis" ID=BGER001539-PA|Name=BGER001539-PA 4 Reactome: R-HSA-917937;KEGG: 00860+1.14.14.18;Reactome: R-HSA-189483;MetaCyc: PWY-5874 "Iron uptake and transport";"Porphyrin and chlorophyll metabolism";"Heme degradation";"Heme degradation I" ID=BGER003496-PA|Name=BGER003496-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6;Reactome: R-HSA-3299685;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017 "Glyoxylate and dicarboxylate metabolism";"Peroxisomal protein import";"Tryptophan metabolism";"Detoxification of Reactive Oxygen Species";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes" ID=BGER021148-PA|Name=BGER021148-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER005270-PA|Name=BGER005270-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER026716-PA|Name=BGER026716-PA 6 Reactome: R-HSA-159236;Reactome: R-HSA-9010553;Reactome: R-HSA-975957;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-73856 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Termination" ID=BGER015374-PA|Name=BGER015374-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-6803205 "RAB geranylgeranylation";"TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain" ID=BGER019298-PA|Name=BGER019298-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-6798695 "Glycosphingolipid metabolism";"Neutrophil degranulation" ID=BGER020163-PA|Name=BGER020163-PA 2 Reactome: R-HSA-1236974;Reactome: R-HSA-1799339 "ER-Phagosome pathway";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER002977-PA|Name=BGER002977-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER009619-PA|Name=BGER009619-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER017370-PA|Name=BGER017370-PA 2 Reactome: R-HSA-6783984;Reactome: R-HSA-389661 "Glycine degradation";"Glyoxylate metabolism and glycine degradation" ID=BGER024274-PA|Name=BGER024274-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER002354-PA|Name=BGER002354-PA 4 MetaCyc: PWY-7822;MetaCyc: PWY-6855;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.14 "Chitin degradation III (Serratia)";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism" ID=BGER003913-PA|Name=BGER003913-PA 4 Reactome: R-HSA-1268020;Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial protein import";"Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER005254-PA|Name=BGER005254-PA 4 Reactome: R-HSA-6781823;Reactome: R-HSA-8856825;Reactome: R-HSA-8951664;Reactome: R-HSA-5696394 "Formation of TC-NER Pre-Incision Complex";"Cargo recognition for clathrin-mediated endocytosis";"Neddylation";"DNA Damage Recognition in GG-NER" ID=BGER003638-PA|Name=BGER003638-PA 1 KEGG: 00970+6.3.5.7 "Aminoacyl-tRNA biosynthesis" ID=BGER002896-PA|Name=BGER002896-PA 5 Reactome: R-HSA-6798695;MetaCyc: PWY-7185;KEGG: 00230+3.6.1.6;MetaCyc: PWY-7210;KEGG: 00240+3.6.1.6 "Neutrophil degranulation";"UTP and CTP dephosphorylation I";"Purine metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine metabolism" ID=BGER006824-PA|Name=BGER006824-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER025739-PA|Name=BGER025739-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER002654-PA|Name=BGER002654-PA 2 MetaCyc: PWY-6938;Reactome: R-HSA-430039 "NADH repair";"mRNA decay by 5' to 3' exoribonuclease" ID=BGER013959-PA|Name=BGER013959-PA 5 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68949 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin" ID=BGER014673-PA|Name=BGER014673-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER012528-PA|Name=BGER012528-PA 1 Reactome: R-HSA-8849932 "Synaptic adhesion-like molecules" ID=BGER019490-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER026429-PA|Name=BGER026429-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER023390-PA|Name=BGER023390-PA 10 Reactome: R-HSA-4719360;MetaCyc: PWY-7979;Reactome: R-HSA-4719377;MetaCyc: PWY-7661;Reactome: R-HSA-162699;Reactome: R-HSA-4717374;KEGG: 00510+2.4.1.83;MetaCyc: PWY-7922;MetaCyc: PWY-7921;Reactome: R-HSA-913709 "Defective DPM3 causes DPM3-CDG (CDG-1o)";"Protein O-mannosylation III (mammals, core M3)";"Defective DPM2 causes DPM2-CDG (CDG-1u)";"Protein N-glycosylation (Haloferax volcanii)";"Synthesis of dolichyl-phosphate mannose";"Defective DPM1 causes DPM1-CDG (CDG-1e)";"N-Glycan biosynthesis";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"O-linked glycosylation of mucins" ID=BGER005530-PA|Name=BGER005530-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER007068-PA|Name=BGER007068-PA 4 KEGG: 00970+6.1.1.10;KEGG: 00450+6.1.1.10;Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Selenocompound metabolism";"Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" ID=BGER024516-PA|Name=BGER024516-PA 5 Reactome: R-HSA-936964;Reactome: R-HSA-9013973;Reactome: R-HSA-936440;Reactome: R-HSA-933541;Reactome: R-HSA-918233 "Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon";"TICAM1-dependent activation of IRF3/IRF7";"Negative regulators of DDX58/IFIH1 signaling";"TRAF6 mediated IRF7 activation";"TRAF3-dependent IRF activation pathway" ID=BGER015979-PA|Name=BGER015979-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER004787-PA|Name=BGER004787-PA 52 Reactome: R-HSA-427413;Reactome: R-HSA-5601884;Reactome: R-HSA-167242;Reactome: R-HSA-72203;Reactome: R-HSA-674695;Reactome: R-HSA-72165;Reactome: R-HSA-5250924;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-5578749;Reactome: R-HSA-167161;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-73772;Reactome: R-HSA-167287;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-73863;Reactome: R-HSA-167172;Reactome: R-HSA-76066;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-75953;Reactome: R-HSA-73780;Reactome: R-HSA-6781827;Reactome: R-HSA-76071;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-203927;Reactome: R-HSA-8851708;Reactome: R-HSA-73762;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-1834949;Reactome: R-HSA-76061;Reactome: R-HSA-112382;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-749476;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-73980;Reactome: R-HSA-113418 "NoRC negatively regulates rRNA expression";"PIWI-interacting RNA (piRNA) biogenesis";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Processing of Capped Intron-Containing Pre-mRNA";"RNA Polymerase II Pre-transcription Events";"mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Transcriptional regulation by small RNAs";"HIV Transcription Initiation";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"RNA Polymerase I Promoter Escape";"HIV elongation arrest and recovery";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"RNA Polymerase I Transcription Termination";"Transcription of the HIV genome";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"RNA Polymerase II Transcription Initiation";"RNA Polymerase III Chain Elongation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"MicroRNA (miRNA) biogenesis";"Signaling by FGFR2 IIIa TM";"RNA Polymerase I Transcription Initiation";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Formation of RNA Pol II elongation complex";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase III Transcription Termination";"Formation of the Early Elongation Complex" ID=BGER023589-PA|Name=BGER023589-PA 4 Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693579;Reactome: R-HSA-5693554 "HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" ID=BGER000821-PA|Name=BGER000821-PA 2 Reactome: R-HSA-70350;Reactome: R-HSA-168928 "Fructose catabolism";"DDX58/IFIH1-mediated induction of interferon-alpha/beta" ID=BGER019198-PB|Name=BGER019198-PB 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER020027-PA|Name=BGER020027-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022610-PA|Name=BGER022610-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER024819-PA|Name=BGER024819-PA 3 Reactome: R-HSA-110312;Reactome: R-HSA-5656121;Reactome: R-HSA-5655862 "Translesion synthesis by REV1";"Translesion synthesis by POLI";"Translesion synthesis by POLK" ID=BGER024246-PC|Name=BGER024246-PC 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021915-PA|Name=BGER021915-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER026833-PA|Name=BGER026833-PA 9 Reactome: R-HSA-167162;Reactome: R-HSA-167161;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-6804756;Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-73779;Reactome: R-HSA-73776 "RNA Polymerase II HIV Promoter Escape";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape" ID=BGER005519-PA|Name=BGER005519-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-1362409 "Mitochondrial protein import";"Mitochondrial iron-sulfur cluster biogenesis" ID=BGER006518-PA|Name=BGER006518-PA 7 Reactome: R-HSA-389661;KEGG: 00620+1.2.4.1;Reactome: R-HSA-5362517;KEGG: 00010+1.2.4.1;Reactome: R-HSA-70268;KEGG: 00020+1.2.4.1;Reactome: R-HSA-204174 "Glyoxylate metabolism and glycine degradation";"Pyruvate metabolism";"Signaling by Retinoic Acid";"Glycolysis / Gluconeogenesis";"Pyruvate metabolism";"Citrate cycle (TCA cycle)";"Regulation of pyruvate dehydrogenase (PDH) complex" ID=BGER014987-PA|Name=BGER014987-PA 1 Reactome: R-HSA-2022928 "HS-GAG biosynthesis" ID=BGER011786-PA|Name=BGER011786-PA 5 Reactome: R-HSA-77595;Reactome: R-HSA-73856;Reactome: R-HSA-159231;Reactome: R-HSA-72163;Reactome: R-HSA-72187 "Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA Derived from an Intronless Transcript";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing" ID=BGER023989-PA|Name=BGER023989-PA 12 Reactome: R-HSA-205043;Reactome: R-HSA-2122948;Reactome: R-HSA-2979096;Reactome: R-HSA-9017802;Reactome: R-HSA-2894862;Reactome: R-HSA-1251985;Reactome: R-HSA-2644606;Reactome: R-HSA-3928665;Reactome: R-HSA-193692;Reactome: R-HSA-977225;Reactome: R-HSA-9013700;Reactome: R-HSA-9013507 "NRIF signals cell death from the nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Noncanonical activation of NOTCH3";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Nuclear signaling by ERBB4";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"EPH-ephrin mediated repulsion of cells";"Regulated proteolysis of p75NTR";"Amyloid fiber formation";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"NOTCH3 Activation and Transmission of Signal to the Nucleus" ID=BGER009415-PA|Name=BGER009415-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" ID=BGER027222-PA|Name=BGER027222-PA 6 MetaCyc: PWY-7442;MetaCyc: PWY-6608;KEGG: 00230+3.5.4.3;MetaCyc: PWY-5497;MetaCyc: PWY-6606;Reactome: R-HSA-74259 "Drosopterin and aurodrosopterin biosynthesis";"Guanosine nucleotides degradation III";"Purine metabolism";"Purine nucleobases degradation II (anaerobic)";"Guanosine nucleotides degradation II";"Purine catabolism" ID=BGER005292-PA|Name=BGER005292-PA 1 Reactome: R-HSA-425366 "Transport of bile salts and organic acids, metal ions and amine compounds" ID=BGER007655-PA|Name=BGER007655-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER004476-PA|Name=BGER004476-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER014219-PA|Name=BGER014219-PA 1 Reactome: R-HSA-4085001 "Sialic acid metabolism" ID=BGER007489-PA|Name=BGER007489-PA 3 Reactome: R-HSA-73621;Reactome: R-HSA-196807;Reactome: R-HSA-74259 "Pyrimidine catabolism";"Nicotinate metabolism";"Purine catabolism" ID=BGER027377-PA|Name=BGER027377-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER024199-PA|Name=BGER024199-PA 2 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603 "DNA Damage Recognition in GG-NER";"UCH proteinases" ID=BGER018711-PA|Name=BGER018711-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER008418-PA|Name=BGER008418-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER004644-PA|Name=BGER004644-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76066;Reactome: R-HSA-76061 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER026726-PA|Name=BGER026726-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER006636-PA|Name=BGER006636-PA 1 Reactome: R-HSA-1483166 "Synthesis of PA" ID=BGER026572-PA|Name=BGER026572-PA 4 Reactome: R-HSA-77387;Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-917977 "Insulin receptor recycling";"ROS and RNS production in phagocytes";"Ion channel transport";"Transferrin endocytosis and recycling" ID=BGER002339-PA|Name=BGER002339-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER023201-PA|Name=BGER023201-PA 4 KEGG: 00970+6.1.1.7;Reactome: R-HSA-5368286;Reactome: R-HSA-379716;Reactome: R-HSA-156842 "Aminoacyl-tRNA biosynthesis";"Mitochondrial translation initiation";"Cytosolic tRNA aminoacylation";"Eukaryotic Translation Elongation" ID=BGER013113-PA|Name=BGER013113-PA 26 Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-389977;Reactome: R-HSA-380320;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-5617833;Reactome: R-HSA-9646399;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-2500257;Reactome: R-HSA-389960;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-5626467 "Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Post-chaperonin tubulin folding pathway";"Recruitment of NuMA to mitotic centrosomes";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Cilium Assembly";"Aggrephagy";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Resolution of Sister Chromatid Cohesion";"Formation of tubulin folding intermediates by CCT/TriC";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"RHO GTPases activate IQGAPs" ID=BGER008971-PA|Name=BGER008971-PA 1 Reactome: R-HSA-425366 "Transport of bile salts and organic acids, metal ions and amine compounds" ID=BGER022597-PA|Name=BGER022597-PA 3 Reactome: R-HSA-70268;MetaCyc: PWY-5386;KEGG: 00620+4.4.1.5 "Pyruvate metabolism";"Methylglyoxal degradation I";"Pyruvate metabolism" ID=BGER004948-PA|Name=BGER004948-PA 5 Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-77387 "Ion channel transport";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Insulin receptor recycling" ID=BGER019138-PA|Name=BGER019138-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER012753-PA|Name=BGER012753-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER007311-PA|Name=BGER007311-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" ID=BGER028745-PA|Name=BGER028745-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER016109-PA|Name=BGER016109-PA 1 Reactome: R-HSA-435368 "Zinc efflux and compartmentalization by the SLC30 family" ID=BGER025128-PA|Name=BGER025128-PA 28 Reactome: R-HSA-5696397;Reactome: R-HSA-912446;Reactome: R-HSA-110312;Reactome: R-HSA-5358565;Reactome: R-HSA-6782135;Reactome: R-HSA-3371511;Reactome: R-HSA-5655862;Reactome: R-HSA-5651801;Reactome: R-HSA-174437;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-3371453;Reactome: R-HSA-5656121;Reactome: R-HSA-5693616;Reactome: R-HSA-6782210;Reactome: R-HSA-5685938;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-5656169;Reactome: R-HSA-69166;Reactome: R-HSA-5696395;Reactome: R-HSA-6783310;Reactome: R-HSA-5696400;Reactome: R-HSA-5693607;Reactome: R-HSA-5358606;Reactome: R-HSA-68962;Reactome: R-HSA-110314 "Gap-filling DNA repair synthesis and ligation in GG-NER";"Meiotic recombination";"Translesion synthesis by REV1";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Dual incision in TC-NER";"HSF1 activation";"Translesion synthesis by POLK";"PCNA-Dependent Long Patch Base Excision Repair";"Removal of the Flap Intermediate from the C-strand";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Regulation of HSF1-mediated heat shock response";"Translesion synthesis by POLI";"Presynaptic phase of homologous DNA pairing and strand exchange";"Gap-filling DNA repair synthesis and ligation in TC-NER";"HDR through Single Strand Annealing (SSA)";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"Termination of translesion DNA synthesis";"Removal of the Flap Intermediate";"Formation of Incision Complex in GG-NER";"Fanconi Anemia Pathway";"Dual Incision in GG-NER";"Processing of DNA double-strand break ends";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Activation of the pre-replicative complex";"Recognition of DNA damage by PCNA-containing replication complex" ID=BGER007649-PA|Name=BGER007649-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER004982-PA|Name=BGER004982-PA 1 Reactome: R-HSA-2995383 "Initiation of Nuclear Envelope Reformation" ID=BGER003601-PA|Name=BGER003601-PA 1 Reactome: R-HSA-8874211 "CREB3 factors activate genes" ID=BGER012944-PA|Name=BGER012944-PA 3 Reactome: R-HSA-5423646;Reactome: R-HSA-2142691;MetaCyc: PWY-7533 "Aflatoxin activation and detoxification";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis" ID=BGER018367-PA|Name=BGER018367-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER026724-PA|Name=BGER026724-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER025706-PA|Name=BGER025706-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER017209-PA|Name=BGER017209-PA 1 Reactome: R-HSA-426486 "Small interfering RNA (siRNA) biogenesis" ID=BGER008626-PA|Name=BGER008626-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER021152-PA|Name=BGER021152-PA 13 MetaCyc: PWY-561;KEGG: 00620+4.2.1.2;MetaCyc: PWY-7254;Reactome: R-HSA-71403;MetaCyc: PWY-5392;KEGG: 00020+4.2.1.2;MetaCyc: PWY-6969;MetaCyc: PWY-8086;KEGG: 00720+4.2.1.2;MetaCyc: PWY-5690;MetaCyc: PWY-7384;MetaCyc: PWY-5913;MetaCyc: PWY-6728 "Superpathway of glyoxylate cycle and fatty acid degradation";"Pyruvate metabolism";"TCA cycle VII (acetate-producers)";"Citric acid cycle (TCA cycle)";"Reductive TCA cycle II";"Citrate cycle (TCA cycle)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Carbon fixation pathways in prokaryotes";"TCA cycle II (plants and fungi)";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle" ID=BGER007857-PA|Name=BGER007857-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER022193-PA|Name=BGER022193-PA 6 Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-6804756;Reactome: R-HSA-5693607 "G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Regulation of TP53 Activity through Phosphorylation";"Processing of DNA double-strand break ends" ID=BGER014314-PA|Name=BGER014314-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER026403-PA|Name=BGER026403-PA 1 Reactome: R-HSA-8866654 "E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER023705-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER000107-PA|Name=BGER000107-PA 8 Reactome: R-HSA-174411;Reactome: R-HSA-69166;Reactome: R-HSA-69091;Reactome: R-HSA-174430;Reactome: R-HSA-68962;Reactome: R-HSA-113501;Reactome: R-HSA-69183;Reactome: R-HSA-68952 "Polymerase switching on the C-strand of the telomere";"Removal of the Flap Intermediate";"Polymerase switching";"Telomere C-strand synthesis initiation";"Activation of the pre-replicative complex";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Processive synthesis on the lagging strand";"DNA replication initiation" ID=BGER021125-PA|Name=BGER021125-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER006983-PA|Name=BGER006983-PA 16 Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits" ID=BGER024351-PA|Name=BGER024351-PA 6 Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72695 "Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex" ID=BGER025626-PA|Name=BGER025626-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" ID=BGER020522-PA|Name=BGER020522-PA 14 Reactome: R-HSA-1632852;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-141444;Reactome: R-HSA-5620924;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-6811436;Reactome: R-HSA-5663220;Reactome: R-HSA-2132295;Reactome: R-HSA-2467813;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878 "Macroautophagy";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Intraflagellar transport";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"COPI-independent Golgi-to-ER retrograde traffic";"RHO GTPases Activate Formins";"MHC class II antigen presentation";"Separation of Sister Chromatids";"HCMV Early Events";"COPI-mediated anterograde transport" ID=BGER007281-PA|Name=BGER007281-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER020660-PA|Name=BGER020660-PA 3 Reactome: R-HSA-6804115;Reactome: R-HSA-5617472;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Deadenylation of mRNA" ID=BGER016738-PA|Name=BGER016738-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER004496-PA|Name=BGER004496-PA 1 Reactome: R-HSA-196843 "Vitamin B2 (riboflavin) metabolism" ID=BGER027080-PA|Name=BGER027080-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER011038-PA|Name=BGER011038-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER014470-PA|Name=BGER014470-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER025095-PA|Name=BGER025095-PA 11 Reactome: R-HSA-170660;Reactome: R-HSA-170670;Reactome: R-HSA-164378;Reactome: R-HSA-418555;Reactome: R-HSA-163359;KEGG: 00230+4.6.1.1;Reactome: R-HSA-432040;Reactome: R-HSA-5610787;Reactome: R-HSA-418594;Reactome: R-HSA-418597;Reactome: R-HSA-163615 "Adenylate cyclase activating pathway";"Adenylate cyclase inhibitory pathway";"PKA activation in glucagon signalling";"G alpha (s) signalling events";"Glucagon signaling in metabolic regulation";"Purine metabolism";"Vasopressin regulates renal water homeostasis via Aquaporins";"Hedgehog 'off' state";"G alpha (i) signalling events";"G alpha (z) signalling events";"PKA activation" ID=BGER017067-PA|Name=BGER017067-PA 2 Reactome: R-HSA-532668;KEGG: 00511+3.2.1.96 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Other glycan degradation" ID=BGER002800-PA|Name=BGER002800-PA 2 Reactome: R-HSA-446193;KEGG: 00510+2.4.1.256 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"N-Glycan biosynthesis" ID=BGER012983-PA|Name=BGER012983-PA 6 Reactome: R-HSA-427413;Reactome: R-HSA-5250924;Reactome: R-HSA-73772;Reactome: R-HSA-427359;Reactome: R-HSA-73863;Reactome: R-HSA-73762 "NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"SIRT1 negatively regulates rRNA expression";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Transcription Initiation" ID=BGER025352-PA|Name=BGER025352-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER020142-PA|Name=BGER020142-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER020043-PA|Name=BGER020043-PA 2 Reactome: R-HSA-390471;Reactome: R-HSA-1660662 "Association of TriC/CCT with target proteins during biosynthesis";"Glycosphingolipid metabolism" ID=BGER003511-PA|Name=BGER003511-PA 29 Reactome: R-HSA-167172;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-113418;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-167160;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167161;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-5696400;Reactome: R-HSA-73863;Reactome: R-HSA-167158;Reactome: R-HSA-5696395;Reactome: R-HSA-77075;Reactome: R-HSA-76042;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-75955;Reactome: R-HSA-75953;Reactome: R-HSA-427413;Reactome: R-HSA-6781827;Reactome: R-HSA-73762;Reactome: R-HSA-674695 "Transcription of the HIV genome";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Formation of the Early Elongation Complex";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"HIV Transcription Initiation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"Dual Incision in GG-NER";"RNA Polymerase I Transcription Termination";"Formation of the HIV-1 Early Elongation Complex";"Formation of Incision Complex in GG-NER";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Transcription Initiation";"NoRC negatively regulates rRNA expression";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Pre-transcription Events" ID=BGER025994-PA|Name=BGER025994-PA 4 Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Ion channel transport";"Insulin receptor recycling" ID=BGER014991-PA|Name=BGER014991-PA 13 Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902 "Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation" ID=BGER021147-PA|Name=BGER021147-PA 5 Reactome: R-HSA-77595;Reactome: R-HSA-73856;Reactome: R-HSA-72163;Reactome: R-HSA-159231;Reactome: R-HSA-72187 "Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Major Pathway";"Transport of Mature mRNA Derived from an Intronless Transcript";"mRNA 3'-end processing" ID=BGER018046-PA|Name=BGER018046-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER009194-PA|Name=BGER009194-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER015762-PA|Name=BGER015762-PA 11 Reactome: R-HSA-5693554;Reactome: R-HSA-5358565;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-5358606;Reactome: R-HSA-69473;Reactome: R-HSA-5693607;Reactome: R-HSA-6804756;Reactome: R-HSA-5693579 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"G2/M DNA damage checkpoint";"Processing of DNA double-strand break ends";"Regulation of TP53 Activity through Phosphorylation";"Homologous DNA Pairing and Strand Exchange" ID=BGER026530-PA|Name=BGER026530-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER019332-PA|Name=BGER019332-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-194840;Reactome: R-HSA-416482 "NRAGE signals death through JNK";"Rho GTPase cycle";"G alpha (12/13) signalling events" ID=BGER029140-PA|Name=BGER029140-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER012347-PA|Name=BGER012347-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER016469-PA|Name=BGER016469-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER027896-PA|Name=BGER027896-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER009787-PA|Name=BGER009787-PA 1 Reactome: R-HSA-380972 "Energy dependent regulation of mTOR by LKB1-AMPK" ID=BGER023584-PA|Name=BGER023584-PA 2 Reactome: R-HSA-6814122;Reactome: R-HSA-418594 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G alpha (i) signalling events" ID=BGER027128-PA|Name=BGER027128-PA 3 Reactome: R-HSA-75955;Reactome: R-HSA-674695;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex" ID=BGER018964-PD|Name=BGER018964-PD 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER021912-PA|Name=BGER021912-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER008319-PA|Name=BGER008319-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER004249-PA|Name=BGER004249-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER013685-PA|Name=BGER013685-PA 17 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-6790901;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"rRNA modification in the nucleus and cytosol";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER008754-PA|Name=BGER008754-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER018842-PA|Name=BGER018842-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER024208-PA|Name=BGER024208-PA 56 Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-382556;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-195253;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5607761;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5610783;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424 "UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"Ub-specific processing proteases";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI2 by the proteasome";"Separation of Sister Chromatids";"Degradation of AXIN";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling" ID=BGER005268-PA|Name=BGER005268-PA 1 Reactome: R-HSA-5625900 "RHO GTPases activate CIT" ID=BGER007151-PA|Name=BGER007151-PA 14 MetaCyc: PWY-7783;KEGG: 00591+3.1.1.4;MetaCyc: PWY-8051;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482788;MetaCyc: PWY-7409;KEGG: 00592+3.1.1.4;KEGG: 00565+3.1.1.4;Reactome: R-HSA-975634;MetaCyc: PWY-7416;MetaCyc: PWY-7417;MetaCyc: PWY-8053;KEGG: 00564+3.1.1.4+3.1.1.5;MetaCyc: PWY-6803 "Plasmalogen degradation";"Linoleic acid metabolism";"Anandamide biosynthesis I";"Arachidonic acid metabolism";"Acyl chain remodelling of PC";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"alpha-Linolenic acid metabolism";"Ether lipid metabolism";"Retinoid metabolism and transport";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Phospholipid remodeling (phosphatidate, yeast)";"Anandamide biosynthesis II";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing" ID=BGER019110-PA|Name=BGER019110-PA 5 MetaCyc: PWY-6527;MetaCyc: PWY-6317;MetaCyc: PWY-3821;KEGG: 00052+2.7.1.6;KEGG: 00520+2.7.1.6 "Stachyose degradation";"D-galactose degradation I (Leloir pathway)";"D-galactose detoxification";"Galactose metabolism";"Amino sugar and nucleotide sugar metabolism" ID=BGER022562-PA|Name=BGER022562-PA 6 Reactome: R-HSA-196780;MetaCyc: PWY-6722;MetaCyc: PWY-5789;MetaCyc: PWY-4381;MetaCyc: PWY-5743;MetaCyc: PWY-5744 "Biotin transport and metabolism";"Candicidin biosynthesis";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Fatty acid biosynthesis initiation (bacteria and plants)";"3-hydroxypropanoate cycle";"Glyoxylate assimilation" ID=BGER021032-PA|Name=BGER021032-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER023796-PA|Name=BGER023796-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER012053-PA|Name=BGER012053-PA 2 Reactome: R-HSA-432720;Reactome: R-HSA-432722 "Lysosome Vesicle Biogenesis";"Golgi Associated Vesicle Biogenesis" ID=BGER022476-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER024687-PA|Name=BGER024687-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER017725-PA|Name=BGER017725-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" ID=BGER021768-PA|Name=BGER021768-PA 5 KEGG: 00520+2.7.1.6;MetaCyc: PWY-6317;MetaCyc: PWY-6527;MetaCyc: PWY-3821;KEGG: 00052+2.7.1.6 "Amino sugar and nucleotide sugar metabolism";"D-galactose degradation I (Leloir pathway)";"Stachyose degradation";"D-galactose detoxification";"Galactose metabolism" ID=BGER013830-PA|Name=BGER013830-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER013651-PA|Name=BGER013651-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER023521-PA|Name=BGER023521-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER002779-PA|Name=BGER002779-PA 2 Reactome: R-HSA-877300;Reactome: R-HSA-2132295 "Interferon gamma signaling";"MHC class II antigen presentation" ID=BGER010462-PA|Name=BGER010462-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" ID=BGER003074-PA|Name=BGER003074-PA 7 Reactome: R-HSA-380270;Reactome: R-HSA-380320;Reactome: R-HSA-8854518;Reactome: R-HSA-380284;Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2";"Loss of proteins required for interphase microtubule organization from the centrosome";"Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane" ID=BGER011449-PA|Name=BGER011449-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER015957-PA|Name=BGER015957-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER003277-PA|Name=Dicer-2 2 Reactome: R-HSA-203927;Reactome: R-HSA-426486 "MicroRNA (miRNA) biogenesis";"Small interfering RNA (siRNA) biogenesis" ID=BGER024477-PA|Name=BGER024477-PA 7 MetaCyc: PWY-6824;MetaCyc: PWY-5469;MetaCyc: PWY-5461;MetaCyc: PWY-7214;KEGG: 00940+1.11.1.7;MetaCyc: PWY-7445;MetaCyc: PWY-5466 "Justicidin B biosynthesis";"Sesamin biosynthesis";"Betanidin degradation";"Baicalein degradation (hydrogen peroxide detoxification)";"Phenylpropanoid biosynthesis";"Luteolin triglucuronide degradation";"Matairesinol biosynthesis" ID=BGER028159-PA|Name=BGER028159-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" ID=BGER014457-PA|Name=BGER014457-PA 9 MetaCyc: PWY-6351;MetaCyc: PWY-7039;MetaCyc: PWY-8052;KEGG: 00562+3.1.4.11;Reactome: R-HSA-112043;Reactome: R-HSA-1855204;KEGG: 04070+3.1.4.11;MetaCyc: PWY-6367;Reactome: R-HSA-416476 "D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Phosphatidate metabolism, as a signaling molecule";"2-arachidonoylglycerol biosynthesis";"Inositol phosphate metabolism";"PLC beta mediated events";"Synthesis of IP3 and IP4 in the cytosol";"Phosphatidylinositol signaling system";"D-myo-inositol-5-phosphate metabolism";"G alpha (q) signalling events" ID=BGER006228-PA|Name=BGER006228-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER023983-PA|Name=BGER023983-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" ID=BGER001465-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER000116-PA|Name=BGER000116-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER011506-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER016264-PA|Name=BGER016264-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023854-PA|Name=BGER023854-PA 5 Reactome: R-HSA-182971;Reactome: R-HSA-8875360;Reactome: R-HSA-8856828;Reactome: R-HSA-6807004;Reactome: R-HSA-8856825 "EGFR downregulation";"InlB-mediated entry of Listeria monocytogenes into host cell";"Clathrin-mediated endocytosis";"Negative regulation of MET activity";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER027055-PA|Name=BGER027055-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER023114-PA|Name=BGER023114-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER002805-PA|Name=BGER002805-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" ID=BGER014002-PA|Name=BGER014002-PA 9 Reactome: R-HSA-6804756;Reactome: R-HSA-674695;Reactome: R-HSA-75953;Reactome: R-HSA-167161;Reactome: R-HSA-167162;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-76042;Reactome: R-HSA-167172 "Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation";"HIV Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome" ID=BGER029952-PA|Name=BGER029952-PA 3 KEGG: 00230+4.6.1.2;Reactome: R-HSA-392154;Reactome: R-HSA-445355 "Purine metabolism";"Nitric oxide stimulates guanylate cyclase";"Smooth Muscle Contraction" ID=BGER028923-PB|Name=BGER028923-PB 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER006560-PA|Name=BGER006560-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER007383-PA|Name=BGER007383-PA 4 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72163;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing" ID=BGER012925-PA|Name=BGER012925-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER020120-PA|Name=BGER020120-PA 32 Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-72163;Reactome: R-HSA-168325;Reactome: R-HSA-167161;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-167172;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-72165;Reactome: R-HSA-77075;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-167160;Reactome: R-HSA-113418;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-8851708;Reactome: R-HSA-75953;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-6807505;Reactome: R-HSA-76042 "Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"mRNA Splicing - Major Pathway";"Viral Messenger RNA Synthesis";"HIV Transcription Initiation";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"Transcription of the HIV genome";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Splicing - Minor Pathway";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of the Early Elongation Complex";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Initiation";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance" ID=BGER007514-PA|Name=BGER007514-PA 1 Reactome: R-HSA-5656169 "Termination of translesion DNA synthesis" ID=BGER005110-PA|Name=BGER005110-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER023035-PA|Name=BGER023035-PA 42 MetaCyc: PWY-7401;MetaCyc: PWY-7778;KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35;KEGG: 00623+1.1.1.35;MetaCyc: PWY-6435;MetaCyc: PWY-1361;MetaCyc: PWY-7726;MetaCyc: PWY-6863;KEGG: 00640+4.2.1.17;KEGG: 00062+4.2.1.17+1.1.1.35;KEGG: 00592+4.2.1.17;MetaCyc: PWY-7216;KEGG: 00903+4.2.1.17;MetaCyc: PWY-5138;MetaCyc: PWY-7007;KEGG: 00280+4.2.1.17+1.1.1.35;KEGG: 00930+4.2.1.17+1.1.1.35;KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35;KEGG: 00362+4.2.1.17+1.1.1.35;MetaCyc: PWY-6583;MetaCyc: PWY-5109;MetaCyc: PWY-5177;MetaCyc: PWY-6944;MetaCyc: PWY-6883;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-5136;MetaCyc: PWY-7656;MetaCyc: PWY-6946;KEGG: 00071+4.2.1.17+1.1.1.35;KEGG: 00310+4.2.1.17+1.1.1.35;MetaCyc: PWY-7606;KEGG: 00380+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17;KEGG: 00720+4.2.1.17+1.1.1.35;MetaCyc: PWY-7654;MetaCyc: PWY-7094;MetaCyc: PWY-6945;MetaCyc: PWY-5789;KEGG: 00360+4.2.1.17;MetaCyc: PWY-7779;KEGG: 00281+4.2.1.17+1.1.1.35;KEGG: 00410+4.2.1.17 "Crotonate fermentation (to acetate and cyclohexane carboxylate)";"2-methylpropene degradation";"Butanoate metabolism";"Toluene degradation";"4-hydroxybenzoate biosynthesis III (plants)";"Benzoyl-coa degradation I (aerobic)";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Pyruvate fermentation to hexanol (engineered)";"Propanoate metabolism";"Fatty acid elongation";"alpha-Linolenic acid metabolism";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"Limonene and pinene degradation";"Fatty acid beta-oxidation IV (unsaturated, even number)";"Methyl ketone biosynthesis (engineered)";"Valine, leucine and isoleucine degradation";"Caprolactam degradation";"Fatty acid degradation";"Benzoate degradation";"Pyruvate fermentation to butanol I";"Fermentation to 2-methylbutanoate";"Glutaryl-coa degradation";"Androstenedione degradation";"Pyruvate fermentation to butanol II (engineered)";"Butanoate metabolism";"Fatty acid beta-oxidation II (plant peroxisome)";"Spodoptera littoralis pheromone biosynthesis";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Fatty acid degradation";"Lysine degradation";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Tryptophan metabolism";"Aminobenzoate degradation";"Carbon fixation pathways in prokaryotes";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Fatty acid salvage";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Phenylalanine metabolism";"Methyl tert-butyl ether degradation";"Geraniol degradation";"beta-Alanine metabolism" ID=BGER021796-PA|Name=BGER021796-PA 18 MetaCyc: PWY-6642;KEGG: 00950+2.6.1.1;KEGG: 00220+2.6.1.1;MetaCyc: PWY-7383;MetaCyc: PWY-5913;KEGG: 00330+2.6.1.1;MetaCyc: PWY-7117;KEGG: 00270+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00350+2.6.1.1;KEGG: 00710+2.6.1.1;KEGG: 00250+2.6.1.1;KEGG: 00960+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00400+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00401+2.6.1.1;KEGG: 00360+2.6.1.1 "(R)-cysteate degradation";"Isoquinoline alkaloid biosynthesis";"Arginine biosynthesis";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Arginine and proline metabolism";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Cysteine and methionine metabolism";"Coenzyme M biosynthesis II";"Tyrosine metabolism";"Carbon fixation in photosynthetic organisms";"Alanine, aspartate and glutamate metabolism";"Tropane, piperidine and pyridine alkaloid biosynthesis";"Sulfolactate degradation III";"Phenylalanine, tyrosine and tryptophan biosynthesis";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Novobiocin biosynthesis";"Phenylalanine metabolism" ID=BGER013515-PA|Name=BGER013515-PA 7 Reactome: R-HSA-156711;Reactome: R-HSA-1538133;Reactome: R-HSA-69202;Reactome: R-HSA-69205;Reactome: R-HSA-1362300;Reactome: R-HSA-69656;Reactome: R-HSA-1362277 "Polo-like kinase mediated events";"G0 and Early G1";"Cyclin E associated events during G1/S transition";"G1/S-Specific Transcription";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Cyclin A:Cdk2-associated events at S phase entry";"Transcription of E2F targets under negative control by DREAM complex" ID=BGER013645-PA|Name=BGER013645-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER023402-PA|Name=BGER023402-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER025130-PA|Name=BGER025130-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER027583-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER027587-PA|Name=BGER027587-PA 2 Reactome: R-HSA-2672351;Reactome: R-HSA-5578775 "Stimuli-sensing channels";"Ion homeostasis" ID=BGER012170-PA|Name=BGER012170-PA 1 Reactome: R-HSA-72165 "mRNA Splicing - Minor Pathway" ID=BGER013859-PA|Name=BGER013859-PA 6 MetaCyc: PWY-622;MetaCyc: PWY-5067;MetaCyc: PWY-7900;Reactome: R-HSA-3322077;Reactome: R-HSA-3878781;KEGG: 00500+2.4.1.18 "Starch biosynthesis";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Glycogen synthesis";"Glycogen storage disease type IV (GBE1)";"Starch and sucrose metabolism" ID=BGER019735-PA|Name=BGER019735-PA 3 Reactome: R-HSA-5579007;KEGG: 00220+3.5.1.14;Reactome: R-HSA-5423646 "Defective ACY1 causes encephalopathy";"Arginine biosynthesis";"Aflatoxin activation and detoxification" ID=BGER011101-PA|Name=BGER011101-PA 5 Reactome: R-HSA-350054;Reactome: R-HSA-3214815;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862 "Notch-HLH transcription pathway";"HDACs deacetylate histones";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants" ID=BGER005216-PA|Name=BGER005216-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" ID=BGER011930-PA|Name=BGER011930-PA 4 Reactome: R-HSA-1474228;Reactome: R-HSA-2214320;Reactome: R-HSA-2243919;Reactome: R-HSA-1650814 "Degradation of the extracellular matrix";"Anchoring fibril formation";"Crosslinking of collagen fibrils";"Collagen biosynthesis and modifying enzymes" ID=BGER000268-PA|Name=BGER000268-PA 7 KEGG: 00230+4.3.2.2;Reactome: R-HSA-73817;MetaCyc: PWY-7219;MetaCyc: PWY-6124;MetaCyc: PWY-6123;KEGG: 00250+4.3.2.2;MetaCyc: PWY-7234 "Purine metabolism";"Purine ribonucleoside monophosphate biosynthesis";"Adenosine ribonucleotides de novo biosynthesis";"Inosine-5'-phosphate biosynthesis II";"Inosine-5'-phosphate biosynthesis I";"Alanine, aspartate and glutamate metabolism";"Inosine-5'-phosphate biosynthesis III" ID=BGER002060-PA|Name=BGER002060-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-532668 "Neutrophil degranulation";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle" ID=BGER021337-PA|Name=BGER021337-PA 6 KEGG: 00270+2.6.1.52;Reactome: R-HSA-977347;KEGG: 00750+2.6.1.52;MetaCyc: PWY-8010;KEGG: 00260+2.6.1.52;KEGG: 00680+2.6.1.52 "Cysteine and methionine metabolism";"Serine biosynthesis";"Vitamin B6 metabolism";"L-cysteine biosynthesis IX (Trichomonas vaginalis)";"Glycine, serine and threonine metabolism";"Methane metabolism" ID=BGER022081-PA|Name=BGER022081-PA 1 Reactome: R-HSA-379716 "Cytosolic tRNA aminoacylation" ID=BGER014092-PA|Name=BGER014092-PA 10 Reactome: R-HSA-70370;MetaCyc: PWY-6397;Reactome: R-HSA-5609977;MetaCyc: PWY-6527;KEGG: 00052+5.1.3.2;MetaCyc: PWY-7328;KEGG: 00520+5.1.3.2;MetaCyc: PWY-7344;MetaCyc: PWY-6317;MetaCyc: PWY-3821 "Galactose catabolism";"Mycolyl-arabinogalactan-peptidoglycan complex biosynthesis";"Defective GALE can cause Epimerase-deficiency galactosemia (EDG)";"Stachyose degradation";"Galactose metabolism";"Superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis";"Amino sugar and nucleotide sugar metabolism";"UDP-alpha-D-galactose biosynthesis";"D-galactose degradation I (Leloir pathway)";"D-galactose detoxification" ID=BGER025507-PA|Name=BGER025507-PA 33 Reactome: R-HSA-75955;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-73762;Reactome: R-HSA-76042;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-112382;Reactome: R-HSA-69202;Reactome: R-HSA-167160;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-77075;Reactome: R-HSA-5696395;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-8939236;Reactome: R-HSA-113418;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-69231;Reactome: R-HSA-427413;Reactome: R-HSA-674695;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167161;Reactome: R-HSA-73863;Reactome: R-HSA-167158;Reactome: R-HSA-167172;Reactome: R-HSA-69656;Reactome: R-HSA-69273 "RNA Polymerase II Transcription Elongation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"Formation of RNA Pol II elongation complex";"Cyclin E associated events during G1/S transition";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of Incision Complex in GG-NER";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Formation of the Early Elongation Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Cyclin D associated events in G1";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Pre-transcription Events";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"HIV Transcription Initiation";"RNA Polymerase I Transcription Termination";"Formation of the HIV-1 Early Elongation Complex";"Transcription of the HIV genome";"Cyclin A:Cdk2-associated events at S phase entry";"Cyclin A/B1/B2 associated events during G2/M transition" ID=BGER021433-PA|Name=BGER021433-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER000987-PA|Name=BGER000987-PA 6 Reactome: R-HSA-77387;Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-6798695;Reactome: R-HSA-1222556 "Insulin receptor recycling";"Amino acids regulate mTORC1";"Ion channel transport";"Transferrin endocytosis and recycling";"Neutrophil degranulation";"ROS and RNS production in phagocytes" ID=BGER007369-PA|Name=BGER007369-PA 12 Reactome: R-HSA-1912408;Reactome: R-HSA-350054;Reactome: R-HSA-210744;Reactome: R-HSA-2894862;Reactome: R-HSA-9013695;Reactome: R-HSA-2644606;Reactome: R-HSA-73762;Reactome: R-HSA-8941856;Reactome: R-HSA-5250924;Reactome: R-HSA-9013508;Reactome: R-HSA-3214847;Reactome: R-HSA-2122947 "Pre-NOTCH Transcription and Translation";"Notch-HLH transcription pathway";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH4 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"RNA Polymerase I Transcription Initiation";"RUNX3 regulates NOTCH signaling";"B-WICH complex positively regulates rRNA expression";"NOTCH3 Intracellular Domain Regulates Transcription";"HATs acetylate histones";"NOTCH1 Intracellular Domain Regulates Transcription" ID=BGER022412-PA|Name=BGER022412-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026069-PA|Name=BGER026069-PA 15 Reactome: R-HSA-75955;Reactome: R-HSA-9018519;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-2173796;Reactome: R-HSA-167238;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-167243;Reactome: R-HSA-176034;Reactome: R-HSA-6796648 "RNA Polymerase II Transcription Elongation";"Estrogen-dependent gene expression";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Pausing and recovery of Tat-mediated HIV elongation";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"Tat-mediated HIV elongation arrest and recovery";"Interactions of Tat with host cellular proteins";"TP53 Regulates Transcription of DNA Repair Genes" ID=BGER002534-PA|Name=BGER002534-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER011768-PA|Name=BGER011768-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER003928-PA|Name=BGER003928-PA 1 Reactome: R-HSA-6804760 "Regulation of TP53 Activity through Methylation" ID=BGER022710-PA|Name=BGER022710-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER004311-PA|Name=BGER004311-PA 2 Reactome: R-HSA-5610787;Reactome: R-HSA-5620924 "Hedgehog 'off' state";"Intraflagellar transport" ID=BGER003298-PA|Name=BGER003298-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER006491-PB|Name=BGER006491-PB 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER024494-PA|Name=BGER024494-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER027629-PA|Name=BGER027629-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER002579-PA|Name=BGER002579-PA 5 KEGG: 00020+1.2.4.2;KEGG: 00310+1.2.4.2;MetaCyc: PWY-5084;KEGG: 00380+1.2.4.2;Reactome: R-HSA-389661 "Citrate cycle (TCA cycle)";"Lysine degradation";"2-oxoglutarate decarboxylation to succinyl-CoA";"Tryptophan metabolism";"Glyoxylate metabolism and glycine degradation" ID=BGER029364-PA|Name=BGER029364-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER022111-PA|Name=BGER022111-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER025278-PA|Name=BGER025278-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER027268-PA|Name=BGER027268-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER021630-PA|Name=BGER021630-PA 2 Reactome: R-HSA-9029569;Reactome: R-HSA-804914 "NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Transport of fatty acids" ID=BGER018295-PA|Name=BGER018295-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER016307-PA|Name=BGER016307-PA 3 MetaCyc: PWY-7277;KEGG: 00600+3.1.4.12;Reactome: R-HSA-1660662 "Sphingolipid biosynthesis (mammals)";"Sphingolipid metabolism";"Glycosphingolipid metabolism" ID=BGER000092-PA|Name=BGER000092-PA 15 Reactome: R-HSA-5358747;Reactome: R-HSA-4641262;Reactome: R-HSA-5467333;Reactome: R-HSA-5358749;Reactome: R-HSA-5467337;Reactome: R-HSA-5358751;Reactome: R-HSA-3769402;Reactome: R-HSA-5339716;Reactome: R-HSA-196299;Reactome: R-HSA-195253;Reactome: R-HSA-111465;Reactome: R-HSA-5358752;Reactome: R-HSA-5689896;Reactome: R-HSA-5467340;Reactome: R-HSA-5467348 "S33 mutants of beta-catenin aren't phosphorylated";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"APC truncation mutants are not K63 polyubiquitinated";"S37 mutants of beta-catenin aren't phosphorylated";"APC truncation mutants have impaired AXIN binding";"S45 mutants of beta-catenin aren't phosphorylated";"Deactivation of the beta-catenin transactivating complex";"Misspliced GSK3beta mutants stabilize beta-catenin";"Beta-catenin phosphorylation cascade";"Degradation of beta-catenin by the destruction complex";"Apoptotic cleavage of cellular proteins";"T41 mutants of beta-catenin aren't phosphorylated";"Ovarian tumor domain proteases";"AXIN missense mutants destabilize the destruction complex";"Truncations of AMER1 destabilize the destruction complex" ID=BGER006362-PA|Name=BGER006362-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER009734-PA|Name=BGER009734-PA 7 MetaCyc: PWY-6352;KEGG: 00562+2.7.1.67;KEGG: 04070+2.7.1.67;Reactome: R-HSA-1660516;Reactome: R-HSA-1660499;MetaCyc: PWY-6351;Reactome: R-HSA-1660514 "3-phosphoinositide biosynthesis";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Synthesis of PIPs at the early endosome membrane";"Synthesis of PIPs at the plasma membrane";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of PIPs at the Golgi membrane" ID=BGER019633-PA|Name=BGER019633-PA 16 Reactome: R-HSA-373752;MetaCyc: PWY-2161;MetaCyc: PWY-3841;Reactome: R-HSA-196757;MetaCyc: PWY-3661;MetaCyc: PWY-2201;MetaCyc: PWY-1622;MetaCyc: PWY-181;KEGG: 00630+2.1.2.1;MetaCyc: PWY-3661-1;KEGG: 00670+2.1.2.1;MetaCyc: PWY-5497;KEGG: 00260+2.1.2.1;KEGG: 00680+2.1.2.1;KEGG: 00460+2.1.2.1;Reactome: R-HSA-525793 "Netrin-1 signaling";"Folate polyglutamylation";"Folate transformations II (plants)";"Metabolism of folate and pterines";"Glycine betaine degradation I";"Folate transformations I";"Formaldehyde assimilation I (serine pathway)";"Photorespiration ";"Glyoxylate and dicarboxylate metabolism";"Glycine betaine degradation II (mammalian)";"One carbon pool by folate";"Purine nucleobases degradation II (anaerobic)";"Glycine, serine and threonine metabolism";"Methane metabolism";"Cyanoamino acid metabolism";"Myogenesis" ID=BGER012620-PA|Name=BGER012620-PA 3 MetaCyc: PWY-5491;KEGG: 00730+3.1.3.1;KEGG: 00790+3.1.3.1 "Diethylphosphate degradation";"Thiamine metabolism";"Folate biosynthesis" ID=BGER011512-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER012388-PA|Name=BGER012388-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER027262-PA|Name=BGER027262-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER014524-PA|Name=BGER014524-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER001773-PA|Name=BGER001773-PA 8 KEGG: 04660+2.7.10.2;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1 "T cell receptor signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection" ID=BGER019658-PA|Name=BGER019658-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER015285-PA|Name=BGER015285-PA 5 MetaCyc: PWY-6692;MetaCyc: PWY-3781;MetaCyc: PWY-7279;MetaCyc: PWY-7082;KEGG: 00190+7.1.1.8 "Fe(II) oxidation";"Aerobic respiration I (cytochrome c)";"Aerobic respiration II (cytochrome c) (yeast)";"Ammonia oxidation IV (autotrophic ammonia oxidizers)";"Oxidative phosphorylation" ID=BGER020754-PA|Name=BGER020754-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER024779-PA|Name=BGER024779-PA 1 Reactome: R-HSA-169911 "Regulation of Apoptosis" ID=BGER023164-PA|Name=BGER023164-PA 26 Reactome: R-HSA-8941856;Reactome: R-HSA-9614657;Reactome: R-HSA-5621575;Reactome: R-HSA-2122947;Reactome: R-HSA-1234158;Reactome: R-HSA-3214847;Reactome: R-HSA-1989781;Reactome: R-HSA-9018519;Reactome: R-HSA-933541;Reactome: R-HSA-918233;Reactome: R-HSA-2644606;Reactome: R-HSA-400253;Reactome: R-HSA-2894862;Reactome: R-HSA-9013508;Reactome: R-HSA-381340;Reactome: R-HSA-3899300;Reactome: R-HSA-201722;Reactome: R-HSA-3134973;Reactome: R-HSA-1368082;Reactome: R-HSA-210744;Reactome: R-HSA-9617629;Reactome: R-HSA-3371568;Reactome: R-HSA-1912408;Reactome: R-HSA-8866907;Reactome: R-HSA-5617472;Reactome: R-HSA-9013695 "RUNX3 regulates NOTCH signaling";"FOXO-mediated transcription of cell death genes";"CD209 (DC-SIGN) signaling";"NOTCH1 Intracellular Domain Regulates Transcription";"Regulation of gene expression by Hypoxia-inducible Factor";"HATs acetylate histones";"PPARA activates gene expression";"Estrogen-dependent gene expression";"TRAF6 mediated IRF7 activation";"TRAF3-dependent IRF activation pathway";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Circadian Clock";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH3 Intracellular Domain Regulates Transcription";"Transcriptional regulation of white adipocyte differentiation";"SUMOylation of transcription cofactors";"Formation of the beta-catenin:TCF transactivating complex";"LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production";"RORA activates gene expression";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Regulation of FOXO transcriptional activity by acetylation";"Attenuation phase";"Pre-NOTCH Transcription and Translation";"Activation of the TFAP2 (AP-2) family of transcription factors";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"NOTCH4 Intracellular Domain Regulates Transcription" ID=BGER007750-PA|Name=BGER007750-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER018130-PA|Name=BGER018130-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" ID=BGER012142-PA|Name=BGER012142-PA 18 Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-77075;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167160;Reactome: R-HSA-167200;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-674695;Reactome: R-HSA-167242;Reactome: R-HSA-75955 "Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Pre-transcription Events";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Transcription Elongation" ID=BGER025067-PA|Name=BGER025067-PA 2 Reactome: R-HSA-8854518;Reactome: R-HSA-6804756 "AURKA Activation by TPX2";"Regulation of TP53 Activity through Phosphorylation" ID=BGER001260-PA|Name=BGER001260-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956 "Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" ID=BGER009671-PA|Name=BGER009671-PA 52 Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-174113;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610785;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-382556;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-69601;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176 "Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"GLI3 is processed to GLI3R by the proteasome";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"ABC-family proteins mediated transport";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"Ub-specific processing proteases";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha" ID=BGER026679-PA|Name=BGER026679-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008260-PA|Name=BGER008260-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" ID=BGER010853-PA|Name=BGER010853-PA 2 KEGG: 00450+2.7.9.3;MetaCyc: PWY-6281 "Selenocompound metabolism";"L-selenocysteine biosynthesis II (archaea and eukaryotes)" ID=BGER014613-PA|Name=BGER014613-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER016898-PA|Name=BGER016898-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER016140-PA|Name=BGER016140-PA 13 KEGG: 00020+6.2.1.5;MetaCyc: PWY-6728;MetaCyc: PWY-5913;KEGG: 00660+6.2.1.5;MetaCyc: PWY-7384;MetaCyc: PWY-5690;KEGG: 00640+6.2.1.5;MetaCyc: PWY-6969;MetaCyc: PWY-5392;Reactome: R-HSA-71403;MetaCyc: PWY-5538;KEGG: 00720+6.2.1.5;MetaCyc: PWY-5537 "Citrate cycle (TCA cycle)";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)";"C5-Branched dibasic acid metabolism";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"TCA cycle II (plants and fungi)";"Propanoate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"Citric acid cycle (TCA cycle)";"Pyruvate fermentation to acetate VI";"Carbon fixation pathways in prokaryotes";"Pyruvate fermentation to acetate V" ID=BGER010244-PA|Name=BGER010244-PA 2 Reactome: R-HSA-5083628;Reactome: R-HSA-5173105 "Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3";"O-linked glycosylation" ID=BGER009209-PA|Name=BGER009209-PA 2 Reactome: R-HSA-5619061;Reactome: R-HSA-425397 "Defective SLC33A1 causes spastic paraplegia 42 (SPG42)";"Transport of vitamins, nucleosides, and related molecules" ID=BGER003110-PA|Name=BGER003110-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER011461-PA|Name=BGER011461-PA 2 Reactome: R-HSA-5689603;Reactome: R-HSA-5696394 "UCH proteinases";"DNA Damage Recognition in GG-NER" ID=BGER022800-PA|Name=BGER022800-PA 2 KEGG: 00970+6.1.1.9;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" ID=BGER024824-PA|Name=BGER024824-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER024318-PA|Name=BGER024318-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017512-PA|Name=BGER017512-PA 1 Reactome: R-HSA-5610787 "Hedgehog 'off' state" ID=BGER001982-PA|Name=BGER001982-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER017211-PA|Name=BGER017211-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER011263-PA|Name=BGER011263-PA 2 Reactome: R-HSA-382556;Reactome: R-HSA-5678895 "ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis" ID=BGER010038-PA|Name=BGER010038-PA 8 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-2465910;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"MASTL Facilitates Mitotic Progression";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway" ID=BGER018932-PA|Name=BGER018932-PA 3 Reactome: R-HSA-192456;KEGG: 00561+3.1.1.3;MetaCyc: PWY-6857 "Digestion of dietary lipid";"Glycerolipid metabolism";"Retinol biosynthesis" ID=BGER005875-PA|Name=BGER005875-PA 2 KEGG: 00520+5.4.2.10;MetaCyc: PWY-6749 "Amino sugar and nucleotide sugar metabolism";"CMP-legionaminate biosynthesis I" ID=BGER005955-PA|Name=BGER005955-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER010183-PA|Name=BGER010183-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556 "Insulin receptor recycling";"Ion channel transport";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes" ID=BGER005372-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER017755-PA|Name=BGER017755-PA 3 KEGG: 00564+4.1.1.65;MetaCyc: PWY-5669;Reactome: R-HSA-1483213 "Glycerophospholipid metabolism";"Phosphatidylserine and phosphatidylethanolamine biosynthesis I";"Synthesis of PE" ID=BGER019818-PA|Name=BGER019818-PA 6 KEGG: 00030+3.1.1.17;KEGG: 00930+3.1.1.17;MetaCyc: PWY-2221;KEGG: 00053+3.1.1.17;MetaCyc: PWY-5530;MetaCyc: PWY-7165 "Pentose phosphate pathway";"Caprolactam degradation";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Ascorbate and aldarate metabolism";"Sorbitol biosynthesis II";"L-ascorbate biosynthesis VI (engineered pathway)" ID=BGER018057-PA|Name=BGER018057-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER008690-PA|Name=BGER008690-PA 3 Reactome: R-HSA-5423646;Reactome: R-HSA-2142691;MetaCyc: PWY-7533 "Aflatoxin activation and detoxification";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis" ID=BGER010911-PA|Name=BGER010911-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER023346-PA|Name=BGER023346-PA 11 Reactome: R-HSA-418555;Reactome: R-HSA-164378;Reactome: R-HSA-170670;Reactome: R-HSA-170660;Reactome: R-HSA-5610787;Reactome: R-HSA-432040;KEGG: 00230+4.6.1.1;Reactome: R-HSA-163359;Reactome: R-HSA-163615;Reactome: R-HSA-418597;Reactome: R-HSA-418594 "G alpha (s) signalling events";"PKA activation in glucagon signalling";"Adenylate cyclase inhibitory pathway";"Adenylate cyclase activating pathway";"Hedgehog 'off' state";"Vasopressin regulates renal water homeostasis via Aquaporins";"Purine metabolism";"Glucagon signaling in metabolic regulation";"PKA activation";"G alpha (z) signalling events";"G alpha (i) signalling events" ID=BGER001981-PA|Name=BGER001981-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER019690-PA|Name=BGER019690-PA 17 KEGG: 00627+1.14.14.1;MetaCyc: PWY-7826;KEGG: 00830+1.14.14.1;MetaCyc: PWY-5451;KEGG: 00980+1.14.14.1;MetaCyc: PWY-7466;KEGG: 00982+1.14.14.1;MetaCyc: PWY-6992;KEGG: 00380+1.14.14.1;KEGG: 00591+1.14.14.1;MetaCyc: PWY-5665;KEGG: 00071+1.14.14.1;KEGG: 00590+1.14.14.1;KEGG: 00232+1.14.14.1;Reactome: R-HSA-211981;KEGG: 00140+1.14.14.1;MetaCyc: PWY-6398 "Aminobenzoate degradation";"Amaryllidacea alkaloids biosynthesis";"Retinol metabolism";"Acetone degradation I (to methylglyoxal)";"Metabolism of xenobiotics by cytochrome P450";"Acetone degradation III (to propane-1,2-diol)";"Drug metabolism - cytochrome P450";"1,5-anhydrofructose degradation";"Tryptophan metabolism";"Linoleic acid metabolism";"Vanillin biosynthesis I";"Fatty acid degradation";"Arachidonic acid metabolism";"Caffeine metabolism";"Xenobiotics";"Steroid hormone biosynthesis";"Melatonin degradation I" ID=BGER004480-PA|Name=BGER004480-PA 1 Reactome: R-HSA-8849175 "Threonine catabolism" ID=BGER009529-PA|Name=BGER009529-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" ID=BGER005363-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER018337-PA|Name=BGER018337-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-68949;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Switching of origins to a post-replicative state";"Orc1 removal from chromatin";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" ID=BGER015728-PA|Name=BGER015728-PA 1 Reactome: R-HSA-112308 "Presynaptic depolarization and calcium channel opening" ID=BGER002712-PA|Name=BGER002712-PA 10 Reactome: R-HSA-1989781;MetaCyc: PWY-7391;KEGG: 00900+2.3.3.10;KEGG: 00650+2.3.3.10;MetaCyc: PWY-7524;KEGG: 00072+2.3.3.10;MetaCyc: PWY-7571;MetaCyc: PWY-922;KEGG: 00280+2.3.3.10;MetaCyc: PWY-6174 "PPARA activates gene expression";"Isoprene biosynthesis II (engineered)";"Terpenoid backbone biosynthesis";"Butanoate metabolism";"Mevalonate pathway III (archaea)";"Synthesis and degradation of ketone bodies";"Ferrichrome A biosynthesis";"Mevalonate pathway I";"Valine, leucine and isoleucine degradation";"Mevalonate pathway II (archaea)" ID=BGER017472-PA|Name=BGER017472-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER005502-PA|Name=BGER005502-PA 1 Reactome: R-HSA-4419969 "Depolymerisation of the Nuclear Lamina" ID=BGER018815-PA|Name=BGER018815-PA 3 Reactome: R-HSA-5173105;Reactome: R-HSA-5083627;Reactome: R-HSA-2022854 "O-linked glycosylation";"Defective LARGE causes MDDGA6 and MDDGB6";"Keratan sulfate biosynthesis" ID=BGER017286-PA|Name=BGER017286-PA 1 Reactome: R-HSA-5627083 "RHO GTPases regulate CFTR trafficking" ID=BGER012220-PA|Name=BGER012220-PA 2 KEGG: 00970+6.1.1.4;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" ID=BGER010060-PA|Name=BGER010060-PA 7 Reactome: R-HSA-5083628;Reactome: R-HSA-3000171;Reactome: R-HSA-5083629;Reactome: R-HSA-3000178;Reactome: R-HSA-5173105;Reactome: R-HSA-9010553;Reactome: R-HSA-5083633 "Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3";"Non-integrin membrane-ECM interactions";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"ECM proteoglycans";"O-linked glycosylation";"Regulation of expression of SLITs and ROBOs";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1" ID=BGER025966-PA|Name=BGER025966-PA 56 Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-382556;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-195253;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5607761;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5610783;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442 "FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"Ub-specific processing proteases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex";"Separation of Sister Chromatids";"Degradation of AXIN";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI2 by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs" ID=BGER010046-PA|Name=BGER010046-PA 1 Reactome: R-HSA-8876725 "Protein methylation" ID=BGER013504-PA|Name=BGER013504-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" ID=BGER000356-PA|Name=BGER000356-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER012466-PA|Name=BGER012466-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER028574-PA|Name=BGER028574-PA 3 KEGG: 00130+4.1.1.90;Reactome: R-HSA-159740;MetaCyc: PWY-7999 "Ubiquinone and other terpenoid-quinone biosynthesis";"Gamma-carboxylation of protein precursors";"Vitamin K-epoxide cycle" ID=BGER014061-PA|Name=BGER014061-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER000097-PA|Name=BGER000097-PA 2 KEGG: 00040+2.7.1.17;Reactome: R-HSA-5661270 "Pentose and glucuronate interconversions";"Formation of xylulose-5-phosphate" ID=BGER018180-PA|Name=BGER018180-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER018920-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER015570-PA|Name=BGER015570-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Selenocysteine synthesis" ID=BGER003819-PA|Name=BGER003819-PA 3 Reactome: R-HSA-5620916;Reactome: R-HSA-1445148;Reactome: R-HSA-264876 "VxPx cargo-targeting to cilium";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing" ID=BGER002971-PA|Name=BGER002971-PA 3 MetaCyc: PWY-5996;Reactome: R-HSA-75105;MetaCyc: PWY-5987 "Oleate biosynthesis II (animals and fungi)";"Fatty acyl-CoA biosynthesis";"Sorgoleone biosynthesis" ID=BGER019826-PA|Name=BGER019826-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER001101-PA|Name=BGER001101-PA 2 Reactome: R-HSA-5578998;Reactome: R-HSA-174403 "Defective OPLAH causes 5-oxoprolinase deficiency (OPLAHD)";"Glutathione synthesis and recycling" ID=BGER023215-PA|Name=BGER023215-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER026352-PA|Name=BGER026352-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER007544-PA|Name=BGER007544-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER010688-PA|Name=BGER010688-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" ID=BGER017868-PA|Name=BGER017868-PA 1 Reactome: R-HSA-1234174 "Cellular response to hypoxia" ID=BGER018190-PA|Name=BGER018190-PA 6 KEGG: 04070+3.1.3.66;KEGG: 00562+3.1.3.66;MetaCyc: PWY-6368;Reactome: R-HSA-1660499;Reactome: R-HSA-1660516;Reactome: R-HSA-1855183 "Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"3-phosphoinositide degradation";"Synthesis of PIPs at the plasma membrane";"Synthesis of PIPs at the early endosome membrane";"Synthesis of IP2, IP, and Ins in the cytosol" ID=BGER024244-PA|Name=BGER024244-PA 1 Reactome: R-HSA-203754 "NOSIP mediated eNOS trafficking" ID=BGER016475-PA|Name=BGER016475-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-8964038 "Neutrophil degranulation";"LDL clearance" ID=BGER021717-PA|Name=BGER021717-PA 6 Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877 "Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase" ID=BGER029093-PA|Name=BGER029093-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER002810-PA|Name=BGER002810-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER011037-PA|Name=BGER011037-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER019084-PA|Name=BGER019084-PA 1 Reactome: R-HSA-197264 "Nicotinamide salvaging" ID=BGER005836-PA|Name=BGER005836-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" ID=BGER025775-PA|Name=BGER025775-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-3270619;Reactome: R-HSA-1834949;Reactome: R-HSA-5693571;Reactome: R-HSA-164843 "Neutrophil degranulation";"IRF3-mediated induction of type I IFN";"Cytosolic sensors of pathogen-associated DNA";"Nonhomologous End-Joining (NHEJ)";"2-LTR circle formation" ID=BGER012285-PA|Name=BGER012285-PA 2 Reactome: R-HSA-5357905;Reactome: R-HSA-5357956 "Regulation of TNFR1 signaling";"TNFR1-induced NFkappaB signaling pathway" ID=BGER009435-PA|Name=BGER009435-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" ID=BGER005678-PA|Name=BGER005678-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER013164-PA|Name=BGER013164-PA 1 Reactome: R-HSA-5685939 "HDR through MMEJ (alt-NHEJ)" ID=BGER018700-PA|Name=BGER018700-PA 7 Reactome: R-HSA-5673001;Reactome: R-HSA-264870;Reactome: R-HSA-6798695;Reactome: R-HSA-6807878;Reactome: R-HSA-375165;Reactome: R-HSA-373753;Reactome: R-HSA-445095 "RAF/MAP kinase cascade";"Caspase-mediated cleavage of cytoskeletal proteins";"Neutrophil degranulation";"COPI-mediated anterograde transport";"NCAM signaling for neurite out-growth";"Nephrin family interactions";"Interaction between L1 and Ankyrins" ID=BGER021008-PA|Name=BGER021008-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" ID=BGER002874-PA|Name=BGER002874-PA 4 Reactome: R-HSA-2395516;Reactome: R-HSA-211976;Reactome: R-HSA-5579026;Reactome: R-HSA-196108 "Electron transport from NADPH to Ferredoxin";"Endogenous sterols";"Defective CYP11A1 causes Adrenal insufficiency, congenital, with 46,XY sex reversal (AICSR)";"Pregnenolone biosynthesis" ID=BGER022400-PA|Name=BGER022400-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER013052-PA|Name=BGER013052-PA 1 Reactome: R-HSA-8873719 "RAB geranylgeranylation" ID=BGER008488-PA|Name=BGER008488-PA 3 KEGG: 00270+5.3.1.23;MetaCyc: PWY-7174;MetaCyc: PWY-4361 "Cysteine and methionine metabolism";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I" ID=BGER027170-PA|Name=BGER027170-PA 7 Reactome: R-HSA-110329;Reactome: R-HSA-110328;Reactome: R-HSA-1221632;Reactome: R-HSA-110331;Reactome: R-HSA-2559586;Reactome: R-HSA-110330;Reactome: R-HSA-171306 "Cleavage of the damaged pyrimidine";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Meiotic synapsis";"Cleavage of the damaged purine";"DNA Damage/Telomere Stress Induced Senescence";"Recognition and association of DNA glycosylase with site containing an affected purine";"Packaging Of Telomere Ends" ID=BGER014252-PA|Name=BGER014252-PA 2 Reactome: R-HSA-9033500;Reactome: R-HSA-9033241 "TYSND1 cleaves peroxisomal proteins";"Peroxisomal protein import" ID=BGER018389-PA|Name=Aquaporin 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER019325-PA|Name=BGER019325-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER029724-PA|Name=BGER029724-PA 8 Reactome: R-HSA-5620912;Reactome: R-HSA-380284;Reactome: R-HSA-380270;Reactome: R-HSA-6798695;Reactome: R-HSA-2565942;Reactome: R-HSA-380259;Reactome: R-HSA-8854518;Reactome: R-HSA-380320 "Anchoring of the basal body to the plasma membrane";"Loss of proteins required for interphase microtubule organization from the centrosome";"Recruitment of mitotic centrosome proteins and complexes";"Neutrophil degranulation";"Regulation of PLK1 Activity at G2/M Transition";"Loss of Nlp from mitotic centrosomes";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes" ID=BGER003628-PA|Name=BGER003628-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER005297-PA|Name=BGER005297-PA 4 KEGG: 00330+2.5.1.16;KEGG: 00270+2.5.1.16;Reactome: R-HSA-351202;KEGG: 00480+2.5.1.16 "Arginine and proline metabolism";"Cysteine and methionine metabolism";"Metabolism of polyamines";"Glutathione metabolism" ID=BGER015581-PA|Name=BGER015581-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-389661 "Peroxisomal protein import";"Glyoxylate metabolism and glycine degradation" ID=BGER019231-PA|Name=BGER019231-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER008661-PA|Name=BGER006528-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER022484-PA|Name=BGER022484-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER017924-PA|Name=BGER017924-PA 2 Reactome: R-HSA-8964038;Reactome: R-HSA-6798695 "LDL clearance";"Neutrophil degranulation" ID=BGER002274-PA|Name=BGER002274-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-71403 "Mitochondrial protein import";"Citric acid cycle (TCA cycle)" ID=BGER005378-PA|Name=BGER005378-PA 6 MetaCyc: PWY-2221;KEGG: 00930+3.1.1.17;KEGG: 00030+3.1.1.17;MetaCyc: PWY-7165;MetaCyc: PWY-5530;KEGG: 00053+3.1.1.17 "Entner-Doudoroff pathway III (semi-phosphorylative)";"Caprolactam degradation";"Pentose phosphate pathway";"L-ascorbate biosynthesis VI (engineered pathway)";"Sorbitol biosynthesis II";"Ascorbate and aldarate metabolism" ID=BGER007320-PA|Name=BGER007320-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER011705-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER025432-PA|Name=BGER025432-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER015331-PA|Name=BGER015331-PA 12 KEGG: 00710+4.1.2.13;MetaCyc: PWY-1042;Reactome: R-HSA-70171;MetaCyc: PWY-7385;KEGG: 00051+4.1.2.13;KEGG: 00030+4.1.2.13;MetaCyc: PWY-1861;KEGG: 00680+4.1.2.13;KEGG: 00010+4.1.2.13;Reactome: R-HSA-70263;MetaCyc: PWY-6142;MetaCyc: PWY-5484 "Carbon fixation in photosynthetic organisms";"Glycolysis IV (plant cytosol)";"Glycolysis";"1,3-propanediol biosynthesis (engineered)";"Fructose and mannose metabolism";"Pentose phosphate pathway";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Methane metabolism";"Glycolysis / Gluconeogenesis";"Gluconeogenesis";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycolysis II (from fructose 6-phosphate)" ID=BGER018654-PA|Name=BGER018654-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER022725-PA|Name=BGER022725-PA 16 Reactome: R-HSA-9010553;Reactome: R-HSA-167243;Reactome: R-HSA-167200;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167238;Reactome: R-HSA-167246;Reactome: R-HSA-180585;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-1234176;Reactome: R-HSA-983168;Reactome: R-HSA-75955;Reactome: R-HSA-674695;Reactome: R-HSA-8951664 "Regulation of expression of SLITs and ROBOs";"Tat-mediated HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"Pausing and recovery of Tat-mediated HIV elongation";"Tat-mediated elongation of the HIV-1 transcript";"Vif-mediated degradation of APOBEC3G";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Antigen processing: Ubiquitination & Proteasome degradation";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events";"Neddylation" ID=BGER002876-PA|Name=BGER002876-PA 6 Reactome: R-HSA-1442490;Reactome: R-HSA-1650814;Reactome: R-HSA-3000171;Reactome: R-HSA-8874081;Reactome: R-HSA-8948216;Reactome: R-HSA-2022090 "Collagen degradation";"Collagen biosynthesis and modifying enzymes";"Non-integrin membrane-ECM interactions";"MET activates PTK2 signaling";"Collagen chain trimerization";"Assembly of collagen fibrils and other multimeric structures" ID=BGER000431-PA|Name=BGER000431-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER008627-PA|Name=BGER008627-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER001469-PA|Name=BGER001469-PA 5 Reactome: R-HSA-532668;Reactome: R-HSA-381426;Reactome: R-HSA-901042;Reactome: R-HSA-8957275;Reactome: R-HSA-879415 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Calnexin/calreticulin cycle";"Post-translational protein phosphorylation";"Advanced glycosylation endproduct receptor signaling" ID=BGER015177-PA|Name=BGER015177-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER002304-PA|Name=BGER002304-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER027760-PA|Name=BGER027760-PA 3 KEGG: 04070+2.7.4.24+2.7.4.21;MetaCyc: PWY-6369;Reactome: R-HSA-1855167 "Phosphatidylinositol signaling system";"Inositol diphosphates biosynthesis";"Synthesis of pyrophosphates in the cytosol" ID=BGER017723-PA|Name=BGER017723-PA 5 Reactome: R-HSA-5625740;Reactome: R-HSA-111447;Reactome: R-HSA-5628897;Reactome: R-HSA-75035;Reactome: R-HSA-1445148 "RHO GTPases activate PKNs";"Activation of BAD and translocation to mitochondria";"TP53 Regulates Metabolic Genes";"Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex";"Translocation of SLC2A4 (GLUT4) to the plasma membrane" ID=BGER018342-PA|Name=BGER018342-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER003656-PA|Name=BGER003656-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER015858-PA|Name=BGER015858-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER027074-PA|Name=BGER027074-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER025273-PA|Name=BGER025273-PA 3 Reactome: R-HSA-5423646;MetaCyc: PWY-7533;Reactome: R-HSA-2142691 "Aflatoxin activation and detoxification";"Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" ID=BGER017032-PB|Name=BGER017032-PB 2 Reactome: R-HSA-6798695;Reactome: R-HSA-6803157 "Neutrophil degranulation";"Antimicrobial peptides" ID=BGER023246-PA|Name=BGER023246-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER027227-PA|Name=BGER027227-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER027266-PA|Name=BGER027266-PA 6 Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-6798695;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Ion channel transport";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Neutrophil degranulation";"Insulin receptor recycling" ID=BGER011510-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER014281-PA|Name=BGER014281-PA 4 Reactome: R-HSA-9020702;Reactome: R-HSA-975144;MetaCyc: PWY-7511;Reactome: R-HSA-937039 "Interleukin-1 signaling";"IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation";"Protein ubiquitination";"IRAK1 recruits IKK complex" ID=BGER014466-PA|Name=BGER014466-PA 1 Reactome: R-HSA-427975 "Proton/oligopeptide cotransporters" ID=BGER005997-PA|Name=BGER005997-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER017049-PA|Name=BGER017049-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER016685-PA|Name=BGER016685-PA 2 Reactome: R-HSA-8866423;Reactome: R-HSA-8963888 "VLDL assembly";"Chylomicron assembly" ID=BGER004799-PA|Name=BGER004799-PA 2 Reactome: R-HSA-3299685;MetaCyc: PWY-6854 "Detoxification of Reactive Oxygen Species";"Ethylene biosynthesis III (microbes)" ID=BGER027984-PA|Name=BGER027984-PA 6 MetaCyc: PWY-6733;MetaCyc: PWY-7782;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER027206-PA|Name=BGER027206-PA 5 Reactome: R-HSA-6798695;MetaCyc: PWY-5189;KEGG: 00860+4.2.1.24;MetaCyc: PWY-5188;Reactome: R-HSA-189451 "Neutrophil degranulation";"Tetrapyrrole biosynthesis II (from glycine)";"Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis I (from glutamate)";"Heme biosynthesis" ID=BGER013282-PA|Name=BGER013282-PA 3 Reactome: R-HSA-5362798;Reactome: R-HSA-8957275;Reactome: R-HSA-381426 "Release of Hh-Np from the secreting cell";"Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" ID=BGER002893-PA|Name=BGER002893-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER010708-PA|Name=BGER010708-PA 2 KEGG: 00270+3.3.1.1;MetaCyc: PWY-5041 "Cysteine and methionine metabolism";"S-adenosyl-L-methionine cycle II" ID=BGER009951-PA|Name=nejire 26 Reactome: R-HSA-933541;Reactome: R-HSA-9018519;Reactome: R-HSA-1989781;Reactome: R-HSA-2894862;Reactome: R-HSA-400253;Reactome: R-HSA-2644606;Reactome: R-HSA-918233;Reactome: R-HSA-8941856;Reactome: R-HSA-3214847;Reactome: R-HSA-5621575;Reactome: R-HSA-2122947;Reactome: R-HSA-1234158;Reactome: R-HSA-9614657;Reactome: R-HSA-8866907;Reactome: R-HSA-1912408;Reactome: R-HSA-9617629;Reactome: R-HSA-3371568;Reactome: R-HSA-1368082;Reactome: R-HSA-210744;Reactome: R-HSA-9013695;Reactome: R-HSA-5617472;Reactome: R-HSA-381340;Reactome: R-HSA-3899300;Reactome: R-HSA-9013508;Reactome: R-HSA-3134973;Reactome: R-HSA-201722 "TRAF6 mediated IRF7 activation";"Estrogen-dependent gene expression";"PPARA activates gene expression";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Circadian Clock";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"TRAF3-dependent IRF activation pathway";"RUNX3 regulates NOTCH signaling";"HATs acetylate histones";"CD209 (DC-SIGN) signaling";"NOTCH1 Intracellular Domain Regulates Transcription";"Regulation of gene expression by Hypoxia-inducible Factor";"FOXO-mediated transcription of cell death genes";"Activation of the TFAP2 (AP-2) family of transcription factors";"Pre-NOTCH Transcription and Translation";"Regulation of FOXO transcriptional activity by acetylation";"Attenuation phase";"RORA activates gene expression";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"NOTCH4 Intracellular Domain Regulates Transcription";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation of white adipocyte differentiation";"SUMOylation of transcription cofactors";"NOTCH3 Intracellular Domain Regulates Transcription";"LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER011140-PA|Name=BGER011140-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER013861-PA|Name=BGER013861-PA 6 MetaCyc: PWY-622;MetaCyc: PWY-5067;MetaCyc: PWY-7900;Reactome: R-HSA-3322077;KEGG: 00500+2.4.1.18;Reactome: R-HSA-3878781 "Starch biosynthesis";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Glycogen synthesis";"Starch and sucrose metabolism";"Glycogen storage disease type IV (GBE1)" ID=BGER023951-PA|Name=BGER023951-PA 4 KEGG: 00513+2.4.1.261;KEGG: 00510+2.4.1.259+2.4.1.261;Reactome: R-HSA-446193;Reactome: R-HSA-4720454 "Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Defective ALG9 causes ALG9-CDG (CDG-1l)" ID=BGER014166-PA|Name=BGER014166-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER025924-PA|Name=BGER025924-PA 2 Reactome: R-HSA-189085;KEGG: 00500+3.2.1.28 "Digestion of dietary carbohydrate";"Starch and sucrose metabolism" ID=BGER007148-PA|Name=BGER007148-PA 14 MetaCyc: PWY-7783;KEGG: 00591+3.1.1.4;MetaCyc: PWY-8051;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482788;KEGG: 00592+3.1.1.4;MetaCyc: PWY-7409;KEGG: 00565+3.1.1.4;Reactome: R-HSA-975634;MetaCyc: PWY-7416;MetaCyc: PWY-7417;KEGG: 00564+3.1.1.4+3.1.1.5;MetaCyc: PWY-8053;MetaCyc: PWY-6803 "Plasmalogen degradation";"Linoleic acid metabolism";"Anandamide biosynthesis I";"Arachidonic acid metabolism";"Acyl chain remodelling of PC";"alpha-Linolenic acid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Ether lipid metabolism";"Retinoid metabolism and transport";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Phospholipid remodeling (phosphatidate, yeast)";"Glycerophospholipid metabolism";"Anandamide biosynthesis II";"Phosphatidylcholine acyl editing" ID=BGER022880-PA|Name=BGER022880-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER023339-PA|Name=BGER023339-PA 3 Reactome: R-HSA-3000171;Reactome: R-HSA-3000157;Reactome: R-HSA-8874081 "Non-integrin membrane-ECM interactions";"Laminin interactions";"MET activates PTK2 signaling" ID=BGER000874-PA|Name=BGER000874-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER023984-PA|Name=BGER023984-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER015477-PA|Name=BGER015477-PA 10 Reactome: R-HSA-2151201;Reactome: R-HSA-3299685;Reactome: R-HSA-9627069;Reactome: R-HSA-111458;Reactome: R-HSA-111463;Reactome: R-HSA-5628897;Reactome: R-HSA-611105;Reactome: R-HSA-111464;Reactome: R-HSA-111459;Reactome: R-HSA-111457 "Transcriptional activation of mitochondrial biogenesis";"Detoxification of Reactive Oxygen Species";"Regulation of the apoptosome activity";"Formation of apoptosome";"SMAC (DIABLO) binds to IAPs";"TP53 Regulates Metabolic Genes";"Respiratory electron transport";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"Activation of caspases through apoptosome-mediated cleavage";"Release of apoptotic factors from the mitochondria" ID=BGER012359-PA|Name=BGER012359-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER018653-PA|Name=BGER018653-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER008642-PA|Name=BGER008642-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER022362-PA|Name=BGER022362-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER015122-PA|Name=BGER015122-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008075-PA|Name=BGER008075-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-975957 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER003582-PA|Name=BGER003582-PA 16 Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-192823 "Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation" ID=BGER016446-PA|Name=BGER016446-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER014828-PA|Name=BGER014828-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER019438-PA|Name=BGER019438-PA 5 MetaCyc: PWY-7383;Reactome: R-HSA-70263;KEGG: 00010+4.1.1.32;KEGG: 00620+4.1.1.32;KEGG: 00020+4.1.1.32 "Anaerobic energy metabolism (invertebrates, cytosol)";"Gluconeogenesis";"Glycolysis / Gluconeogenesis";"Pyruvate metabolism";"Citrate cycle (TCA cycle)" ID=BGER012954-PA|Name=BGER012954-PA 33 Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-1169408;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-2500257;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-5578749;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-9648025;Reactome: R-HSA-9610379;Reactome: R-HSA-141444;Reactome: R-HSA-168276;Reactome: R-HSA-168271;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-5663220;Reactome: R-HSA-4551638 "Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"SUMOylation of DNA replication proteins";"HCMV Early Events";"ISG15 antiviral mechanism";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Resolution of Sister Chromatid Cohesion";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transcriptional regulation by small RNAs";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"EML4 and NUDC in mitotic spindle formation";"HCMV Late Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"NS1 Mediated Effects on Host Pathways";"Transport of Ribonucleoproteins into the Host Nucleus";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"RHO GTPases Activate Formins";"SUMOylation of chromatin organization proteins" ID=BGER028949-PA|Name=BGER028949-PA 2 Reactome: R-HSA-112308;Reactome: R-HSA-422356 "Presynaptic depolarization and calcium channel opening";"Regulation of insulin secretion" ID=BGER008630-PA|Name=BGER008630-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER016214-PA|Name=BGER016214-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER015471-PA|Name=BGER015471-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-2151201 "PPARA activates gene expression";"Transcriptional activation of mitochondrial biogenesis" ID=BGER015114-PA|Name=BGER015114-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER001995-PA|Name=BGER001995-PA 6 Reactome: R-HSA-400253;KEGG: 05235+3.1.3.16;Reactome: R-HSA-2173788;Reactome: R-HSA-163560;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "Circadian Clock";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Downregulation of TGF-beta receptor signaling";"Triglyceride catabolism";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" ID=BGER008790-PA|Name=BGER008790-PA 2 KEGG: 04070+2.7.11.13;Reactome: R-HSA-1660661 "Phosphatidylinositol signaling system";"Sphingolipid de novo biosynthesis" ID=BGER010924-PA|Name=BGER010924-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-917977;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Ion channel transport";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling";"Insulin receptor recycling" ID=BGER029770-PA|Name=BGER029770-PA 2 Reactome: R-HSA-5357956;Reactome: R-HSA-5357905 "TNFR1-induced NFkappaB signaling pathway";"Regulation of TNFR1 signaling" ID=BGER021094-PA|Name=BGER021094-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER016539-PA|Name=BGER016539-PA 1 Reactome: R-HSA-2024096 "HS-GAG degradation" ID=BGER015867-PA|Name=BGER015867-PA 4 Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" ID=BGER008985-PA|Name=BGER008985-PA 27 Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-168276;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-170822 "Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"NS1 Mediated Effects on Host Pathways";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein" ID=BGER008358-PA|Name=BGER008358-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER023706-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012693-PA|Name=BGER012693-PA 1 KEGG: 04660+2.7.10.2 "T cell receptor signaling pathway" ID=BGER024283-PA|Name=BGER024283-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER009609-PA|Name=BGER009609-PA 6 Reactome: R-HSA-9603798;Reactome: R-HSA-5684045;Reactome: R-HSA-1369062;Reactome: R-HSA-390247;Reactome: R-HSA-2046105;Reactome: R-HSA-2046106 "Class I peroxisomal membrane protein import";"Defective ABCD1 causes adrenoleukodystrophy (ALD)";"ABC transporters in lipid homeostasis";"Beta-oxidation of very long chain fatty acids";"Linoleic acid (LA) metabolism";"alpha-linolenic acid (ALA) metabolism" ID=BGER012253-PA|Name=BGER012253-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER010217-PA|Name=BGER010217-PA 7 Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380320;Reactome: R-HSA-380270;Reactome: R-HSA-8854518 "Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"AURKA Activation by TPX2" ID=BGER024150-PA|Name=BGER024150-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER028959-PA|Name=BGER028959-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER007102-PA|Name=BGER007102-PA 14 MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433 "Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)" ID=BGER005186-PA|Name=BGER005186-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER001976-PA|Name=BGER001976-PA 3 Reactome: R-HSA-5632968;Reactome: R-HSA-5358565;Reactome: R-HSA-5632928 "Defective Mismatch Repair Associated With MSH6";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Defective Mismatch Repair Associated With MSH2" ID=BGER024758-PA|Name=BGER024758-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER021023-PA|Name=BGER021023-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER010433-PA|Name=BGER010433-PA 2 Reactome: R-HSA-196780;Reactome: R-HSA-3371599 "Biotin transport and metabolism";"Defective HLCS causes multiple carboxylase deficiency" ID=BGER002683-PA|Name=BGER002683-PA 6 Reactome: R-HSA-1268020;KEGG: 00190+7.1.2.2;MetaCyc: PWY-7980;Reactome: R-HSA-163210;KEGG: 00195+7.1.2.2;Reactome: R-HSA-8949613 "Mitochondrial protein import";"Oxidative phosphorylation";"ATP biosynthesis";"Formation of ATP by chemiosmotic coupling";"Photosynthesis";"Cristae formation" ID=BGER012389-PA|Name=BGER012389-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-375276 "G alpha (i) signalling events";"Peptide ligand-binding receptors" ID=BGER015123-PA|Name=BGER015123-PA 2 KEGG: 00561+2.7.1.30;MetaCyc: PWY-4261 "Glycerolipid metabolism";"Glycerol degradation I" ID=BGER025214-PA|Name=BGER025214-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER011522-PA|Name=BGER011522-PA 4 Reactome: R-HSA-499943;KEGG: 00590+5.3.99.3;Reactome: R-HSA-6798695;Reactome: R-HSA-2162123 "Interconversion of nucleotide di- and triphosphates";"Arachidonic acid metabolism";"Neutrophil degranulation";"Synthesis of Prostaglandins (PG) and Thromboxanes (TX)" ID=BGER007488-PA|Name=BGER007488-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER006550-PA|Name=BGER006550-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-8866654 "Peroxisomal protein import";"E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER007117-PA|Name=BGER007117-PA 1 Reactome: R-HSA-163125 "Post-translational modification: synthesis of GPI-anchored proteins" ID=BGER013908-PA|Name=BGER013908-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-5689880 "Protein ubiquitination";"Ub-specific processing proteases" ID=BGER010743-PA|Name=BGER010743-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER018418-PA|Name=BGER018418-PA 40 MetaCyc: PWY-1361;MetaCyc: PWY-6435;MetaCyc: PWY-7726;MetaCyc: PWY-7778;KEGG: 00623+1.1.1.35;MetaCyc: PWY-7401;KEGG: 00280+4.2.1.17+1.1.1.35;KEGG: 00592+4.2.1.17;MetaCyc: PWY-7216;KEGG: 00062+4.2.1.17+1.1.1.35;MetaCyc: PWY-7007;MetaCyc: PWY-5138;KEGG: 00903+4.2.1.17;KEGG: 00640+4.2.1.17;MetaCyc: PWY-6863;MetaCyc: PWY-7656;KEGG: 00071+4.2.1.17+1.1.1.35;MetaCyc: PWY-6946;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-6883;MetaCyc: PWY-5136;MetaCyc: PWY-5177;MetaCyc: PWY-6583;MetaCyc: PWY-5109;MetaCyc: PWY-6944;KEGG: 00362+4.2.1.17+1.1.1.35;KEGG: 00930+4.2.1.17+1.1.1.35;KEGG: 00360+4.2.1.17;MetaCyc: PWY-5789;MetaCyc: PWY-6945;KEGG: 00410+4.2.1.17;MetaCyc: PWY-7779;KEGG: 00281+4.2.1.17+1.1.1.35;MetaCyc: PWY-7654;MetaCyc: PWY-7094;KEGG: 00720+4.2.1.17+1.1.1.35;MetaCyc: PWY-7606;KEGG: 00380+4.2.1.17+1.1.1.35;KEGG: 00310+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17 "Benzoyl-coa degradation I (aerobic)";"4-hydroxybenzoate biosynthesis III (plants)";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"2-methylpropene degradation";"Toluene degradation";"Crotonate fermentation (to acetate and cyclohexane carboxylate)";"Valine, leucine and isoleucine degradation";"alpha-Linolenic acid metabolism";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"Fatty acid elongation";"Methyl ketone biosynthesis (engineered)";"Fatty acid beta-oxidation IV (unsaturated, even number)";"Limonene and pinene degradation";"Propanoate metabolism";"Pyruvate fermentation to hexanol (engineered)";"Spodoptera littoralis pheromone biosynthesis";"Fatty acid degradation";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Butanoate metabolism";"Pyruvate fermentation to butanol II (engineered)";"Fatty acid beta-oxidation II (plant peroxisome)";"Glutaryl-coa degradation";"Pyruvate fermentation to butanol I";"Fermentation to 2-methylbutanoate";"Androstenedione degradation";"Benzoate degradation";"Caprolactam degradation";"Phenylalanine metabolism";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"beta-Alanine metabolism";"Methyl tert-butyl ether degradation";"Geraniol degradation";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Fatty acid salvage";"Carbon fixation pathways in prokaryotes";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Tryptophan metabolism";"Lysine degradation";"Aminobenzoate degradation" ID=BGER011503-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER015074-PA|Name=BGER015074-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER023322-PA|Name=BGER023322-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026623-PA|Name=BGER026623-PA 9 Reactome: R-HSA-3560801;Reactome: R-HSA-3656253;Reactome: R-HSA-3560783;Reactome: R-HSA-4420332;Reactome: R-HSA-3656237;Reactome: R-HSA-1971475;Reactome: R-HSA-975634;Reactome: R-HSA-2024096;Reactome: R-HSA-2022928 "Defective B3GAT3 causes JDSSDHD";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"Defective B4GALT7 causes EDS, progeroid type";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT2 causes exostoses 2";"A tetrasaccharide linker sequence is required for GAG synthesis";"Retinoid metabolism and transport";"HS-GAG degradation";"HS-GAG biosynthesis" ID=BGER005635-PA|Name=BGER005635-PA 4 Reactome: R-HSA-1655829;Reactome: R-HSA-8963889;Reactome: R-HSA-381033;Reactome: R-HSA-8874211 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"Assembly of active LPL and LIPC lipase complexes";"ATF6 (ATF6-alpha) activates chaperones";"CREB3 factors activate genes" ID=BGER000916-PA|Name=BGER000916-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022837-PA|Name=BGER022837-PA 5 Reactome: R-HSA-3270619;Reactome: R-HSA-3134975;Reactome: R-HSA-1834941;Reactome: R-HSA-6798695;Reactome: R-HSA-3249367 "IRF3-mediated induction of type I IFN";"Regulation of innate immune responses to cytosolic DNA";"STING mediated induction of host immune responses";"Neutrophil degranulation";"STAT6-mediated induction of chemokines" ID=BGER028415-PA|Name=BGER028415-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER011028-PA|Name=BGER011028-PA 1 MetaCyc: PWY-6938 "NADH repair" ID=BGER002371-PA|Name=BGER002371-PA 3 Reactome: R-HSA-202433;Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "Generation of second messenger molecules";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER009795-PA|Name=BGER009795-PA 13 Reactome: R-HSA-8948216;Reactome: R-HSA-2022090;Reactome: R-HSA-3000157;Reactome: R-HSA-3000178;Reactome: R-HSA-216083;Reactome: R-HSA-419037;Reactome: R-HSA-186797;Reactome: R-HSA-2243919;Reactome: R-HSA-2214320;Reactome: R-HSA-1442490;Reactome: R-HSA-1474244;Reactome: R-HSA-3000171;Reactome: R-HSA-1650814 "Collagen chain trimerization";"Assembly of collagen fibrils and other multimeric structures";"Laminin interactions";"ECM proteoglycans";"Integrin cell surface interactions";"NCAM1 interactions";"Signaling by PDGF";"Crosslinking of collagen fibrils";"Anchoring fibril formation";"Collagen degradation";"Extracellular matrix organization";"Non-integrin membrane-ECM interactions";"Collagen biosynthesis and modifying enzymes" ID=BGER021689-PA|Name=BGER021689-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER026890-PA|Name=BGER026890-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER002599-PA|Name=BGER002599-PA 5 KEGG: 00515+2.4.1.109;MetaCyc: PWY-7921;KEGG: 00514+2.4.1.109;MetaCyc: PWY-7979;MetaCyc: PWY-7922 "Mannose type O-glycan biosynthesis";"Protein O-mannosylation I (yeast)";"Other types of O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Protein O-mannosylation II (mammals, core M1 and core M2)" ID=BGER013598-PA|Name=BGER013598-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" ID=BGER009733-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012731-PA|Name=BGER012731-PA 1 Reactome: R-HSA-380320 "Recruitment of NuMA to mitotic centrosomes" ID=BGER019097-PA|Name=BGER019097-PA 4 Reactome: R-HSA-156581;MetaCyc: PWY-5041;MetaCyc: PWY-5912;KEGG: 00270+2.5.1.6 "Methylation";"S-adenosyl-L-methionine cycle II";"2'-deoxymugineic acid phytosiderophore biosynthesis";"Cysteine and methionine metabolism" ID=BGER024560-PA|Name=BGER024560-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER024411-PA|Name=BGER024411-PA 6 Reactome: R-HSA-4793952;MetaCyc: PWY-7426;KEGG: 00513+2.4.1.143;KEGG: 00510+2.4.1.143;Reactome: R-HSA-975578;MetaCyc: PWY-7920 "Defective MGAT2 causes MGAT2-CDG (CDG-2a)";"Complex N-linked glycan biosynthesis (vertebrates)";"Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Reactions specific to the complex N-glycan synthesis pathway";"Complex N-linked glycan biosynthesis (plants)" ID=BGER005052-PA|Name=BGER005052-PA 2 Reactome: R-HSA-6796648;Reactome: R-HSA-6783310 "TP53 Regulates Transcription of DNA Repair Genes";"Fanconi Anemia Pathway" ID=BGER027284-PA|Name=BGER027284-PA 2 Reactome: R-HSA-426117;Reactome: R-HSA-5619039 "Cation-coupled Chloride cotransporters";"Defective SLC12A6 causes agenesis of the corpus callosum, with peripheral neuropathy (ACCPN)" ID=BGER020603-PA|Name=BGER020603-PA 1 Reactome: R-HSA-69273 "Cyclin A/B1/B2 associated events during G2/M transition" ID=BGER006424-PA|Name=BGER006424-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-5689880 "Mitochondrial calcium ion transport";"Ub-specific processing proteases" ID=BGER005382-PA|Name=BGER005382-PA 6 MetaCyc: PWY-2221;KEGG: 00930+3.1.1.17;KEGG: 00030+3.1.1.17;MetaCyc: PWY-5530;MetaCyc: PWY-7165;KEGG: 00053+3.1.1.17 "Entner-Doudoroff pathway III (semi-phosphorylative)";"Caprolactam degradation";"Pentose phosphate pathway";"Sorbitol biosynthesis II";"L-ascorbate biosynthesis VI (engineered pathway)";"Ascorbate and aldarate metabolism" ID=BGER004530-PA|Name=BGER004530-PA 14 MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876 "Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs" ID=BGER016723-PA|Name=BGER016723-PA 13 MetaCyc: PWY-7210;MetaCyc: PWY-6545;KEGG: 00983+1.17.4.1;Reactome: R-HSA-499943;MetaCyc: PWY-7222;KEGG: 00230+1.17.4.1;MetaCyc: PWY-7227;MetaCyc: PWY-7184;MetaCyc: PWY-7226;KEGG: 00240+1.17.4.1;MetaCyc: PWY-7198;KEGG: 00480+1.17.4.1;MetaCyc: PWY-7220 "Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Drug metabolism - other enzymes";"Interconversion of nucleotide di- and triphosphates";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Purine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Glutathione metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis II" ID=BGER021990-PA|Name=BGER021990-PA 1 Reactome: R-HSA-196108 "Pregnenolone biosynthesis" ID=BGER027889-PA|Name=BGER027889-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-6811436 "RAB GEFs exchange GTP for GDP on RABs";"COPI-independent Golgi-to-ER retrograde traffic" ID=BGER011632-PA|Name=Cathepsin 5 Reactome: R-HSA-6798695;Reactome: R-HSA-1442490;Reactome: R-HSA-1679131;Reactome: R-HSA-2022090;Reactome: R-HSA-2132295 "Neutrophil degranulation";"Collagen degradation";"Trafficking and processing of endosomal TLR";"Assembly of collagen fibrils and other multimeric structures";"MHC class II antigen presentation" ID=BGER024125-PA|Name=BGER024125-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER004099-PA|Name=BGER004099-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012 "Formation of a pool of free 40S subunits";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER013428-PA|Name=BGER013428-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER004167-PA|Name=BGER004167-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER024865-PA|Name=BGER024865-PA 2 KEGG: 00230+3.1.4.53;Reactome: R-HSA-180024 "Purine metabolism";"DARPP-32 events" ID=BGER010057-PA|Name=BGER010057-PA 2 Reactome: R-HSA-1268020;MetaCyc: PWY-7533 "Mitochondrial protein import";"Gliotoxin biosynthesis" ID=BGER020342-PA|Name=BGER020342-PA 8 KEGG: 00524+2.7.1.1;KEGG: 00521+2.7.1.1;KEGG: 00520+2.7.1.1;KEGG: 00052+2.7.1.1;KEGG: 00051+2.7.1.1;KEGG: 00010+2.7.1.1;Reactome: R-HSA-70171;KEGG: 00500+2.7.1.1 "Neomycin, kanamycin and gentamicin biosynthesis";"Streptomycin biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Galactose metabolism";"Fructose and mannose metabolism";"Glycolysis / Gluconeogenesis";"Glycolysis";"Starch and sucrose metabolism" ID=BGER018426-PA|Name=BGER018426-PA 4 KEGG: 00280+1.2.1.27;MetaCyc: PWY-5642;Reactome: R-HSA-70895;KEGG: 00640+1.2.1.27 "Valine, leucine and isoleucine degradation";"2,4-dinitrotoluene degradation";"Branched-chain amino acid catabolism";"Propanoate metabolism" ID=BGER003964-PA|Name=BGER003964-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" ID=BGER013122-PA|Name=BGER013122-PA 1 Reactome: R-HSA-1614517 "Sulfide oxidation to sulfate" ID=BGER029853-PA|Name=BGER029853-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER014544-PA|Name=BGER014544-PA 2 Reactome: R-HSA-416476;Reactome: R-HSA-388479 "G alpha (q) signalling events";"Vasopressin-like receptors" ID=BGER026339-PA|Name=BGER026339-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER007295-PA|Name=BGER007295-PA 10 KEGG: 00564+2.3.1.15;MetaCyc: PWY-5667;MetaCyc: PWY-7587;Reactome: R-HSA-1483166;MetaCyc: PWY-8055;MetaCyc: PWY-8053;MetaCyc: PWY-6453;MetaCyc: PWY-7411;MetaCyc: PWY-8051;KEGG: 00561+2.3.1.15 "Glycerophospholipid metabolism";"CDP-diacylglycerol biosynthesis I";"Oleate biosynthesis III (cyanobacteria)";"Synthesis of PA";"Palmitoyl ethanolamide biosynthesis";"Anandamide biosynthesis II";"Stigma estolide biosynthesis";"Phosphatidate biosynthesis (yeast)";"Anandamide biosynthesis I";"Glycerolipid metabolism" ID=BGER015794-PA|Name=BGER015794-PA 1 Reactome: R-HSA-71064 "Lysine catabolism" ID=BGER012599-PA|Name=BGER012599-PA 1 Reactome: R-HSA-2142789 "Ubiquinol biosynthesis" ID=BGER029526-PA|Name=BGER029526-PA 7 Reactome: R-HSA-73980;Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476;Reactome: R-HSA-73780;Reactome: R-HSA-76071;Reactome: R-HSA-1834949 "RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA" ID=BGER015125-PA|Name=BGER015125-PA 2 Reactome: R-HSA-1483115;Reactome: R-HSA-1483152 "Hydrolysis of LPC";"Hydrolysis of LPE" ID=BGER023103-PA|Name=BGER023103-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" ID=BGER005025-PA|Name=BGER005025-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER001489-PA|Name=BGER001489-PA 5 Reactome: R-HSA-3249367;Reactome: R-HSA-6798695;Reactome: R-HSA-3270619;Reactome: R-HSA-3134975;Reactome: R-HSA-1834941 "STAT6-mediated induction of chemokines";"Neutrophil degranulation";"IRF3-mediated induction of type I IFN";"Regulation of innate immune responses to cytosolic DNA";"STING mediated induction of host immune responses" ID=BGER015052-PA|Name=BGER015052-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER000947-PA|Name=BGER000947-PA 2 KEGG: 00514+2.4.1.221;Reactome: R-HSA-1912399 "Other types of O-glycan biosynthesis";"Pre-NOTCH Processing in the Endoplasmic Reticulum" ID=BGER014939-PA|Name=BGER014939-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" ID=BGER028024-PA|Name=BGER028024-PA 6 Reactome: R-HSA-6804756;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-5693607;Reactome: R-HSA-69473;Reactome: R-HSA-176187 "Regulation of TP53 Activity through Phosphorylation";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Processing of DNA double-strand break ends";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress" ID=BGER008350-PA|Name=BGER008350-PA 6 MetaCyc: PWY-6854;Reactome: R-HSA-2151201;Reactome: R-HSA-3299685;Reactome: R-HSA-8862803;Reactome: R-HSA-9615017;Reactome: R-HSA-8950505 "Ethylene biosynthesis III (microbes)";"Transcriptional activation of mitochondrial biogenesis";"Detoxification of Reactive Oxygen Species";"Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" ID=BGER008255-PA|Name=BGER008255-PA 8 Reactome: R-HSA-9627069;Reactome: R-HSA-111463;Reactome: R-HSA-111458;Reactome: R-HSA-8953750;Reactome: R-HSA-6798695;Reactome: R-HSA-6803207;Reactome: R-HSA-111459;Reactome: R-HSA-111464 "Regulation of the apoptosome activity";"SMAC (DIABLO) binds to IAPs";"Formation of apoptosome";"Transcriptional Regulation by E2F6";"Neutrophil degranulation";"TP53 Regulates Transcription of Caspase Activators and Caspases";"Activation of caspases through apoptosome-mediated cleavage";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes" ID=BGER001450-PA|Name=BGER001450-PA 1 Reactome: R-HSA-606279 "Deposition of new CENPA-containing nucleosomes at the centromere" ID=BGER022188-PA|Name=BGER022188-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER009032-PA|Name=BGER009032-PA 1 Reactome: R-HSA-432720 "Lysosome Vesicle Biogenesis" ID=BGER007996-PA|Name=BGER007996-PA 4 KEGG: 00473+5.1.1.1;MetaCyc: PWY-8040;MetaCyc: PWY-8072;MetaCyc: PWY-7383 "D-Alanine metabolism";"Ansatrienin biosynthesis";"Alanine racemization";"Anaerobic energy metabolism (invertebrates, cytosol)" ID=BGER021395-PA|Name=BGER021395-PA 57 Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-195253;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-382556;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603;Reactome: R-HSA-68827;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-6798695;Reactome: R-HSA-5607761;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-8939236;Reactome: R-HSA-5610783 "Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"Ub-specific processing proteases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"UCH proteinases";"CDT1 association with the CDC6:ORC:origin complex";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Degradation of AXIN";"Neutrophil degranulation";"Dectin-1 mediated noncanonical NF-kB signaling";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI2 by the proteasome" ID=BGER014836-PA|Name=BGER014836-PA 8 MetaCyc: PWY-7391;Reactome: R-HSA-1989781;Reactome: R-HSA-191273;MetaCyc: PWY-7524;KEGG: 00900+1.1.1.34;MetaCyc: PWY-922;MetaCyc: PWY-6174;Reactome: R-HSA-2426168 "Isoprene biosynthesis II (engineered)";"PPARA activates gene expression";"Cholesterol biosynthesis";"Mevalonate pathway III (archaea)";"Terpenoid backbone biosynthesis";"Mevalonate pathway I";"Mevalonate pathway II (archaea)";"Activation of gene expression by SREBF (SREBP)" ID=BGER005557-PA|Name=BGER005557-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" ID=BGER006243-PA|Name=BGER006243-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER023631-PA|Name=BGER023631-PA 5 Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-6784531 "mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"tRNA processing in the nucleus" ID=BGER008058-PA|Name=BGER008058-PA 2 Reactome: R-HSA-9010553;Reactome: R-HSA-975957 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER009344-PA|Name=BGER009344-PA 1 Reactome: R-HSA-5358493 "Synthesis of diphthamide-EEF2" ID=BGER012785-PA|Name=BGER012785-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER015561-PA|Name=BGER015561-PA 4 Reactome: R-HSA-3928662;Reactome: R-HSA-8856828;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "EPHB-mediated forward signaling";"Clathrin-mediated endocytosis";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER025671-PA|Name=BGER025671-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER001258-PA|Name=BGER001258-PA 2 Reactome: R-HSA-73621;Reactome: R-HSA-73614 "Pyrimidine catabolism";"Pyrimidine salvage" ID=BGER011919-PA|Name=BGER011919-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER000392-PA|Name=BGER000392-PA 18 KEGG: 00240+2.7.4.6;MetaCyc: PWY-7227;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7205;MetaCyc: PWY-7210;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7197;MetaCyc: PWY-7224;MetaCyc: PWY-7187;MetaCyc: PWY-7184;Reactome: R-HSA-499943;MetaCyc: PWY-7222;MetaCyc: PWY-6545;MetaCyc: PWY-7221;MetaCyc: PWY-7176;MetaCyc: PWY-7220;MetaCyc: PWY-7198;MetaCyc: PWY-7226 "Pyrimidine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis";"Purine metabolism";"CMP phosphorylation";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleotide phosphorylation";"Purine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Interconversion of nucleotide di- and triphosphates";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine ribonucleotides de novo biosynthesis";"UTP and CTP de novo biosynthesis";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Guanosine deoxyribonucleotides de novo biosynthesis I" ID=BGER019963-PA|Name=BGER019963-PA 2 Reactome: R-HSA-3299685;MetaCyc: PWY-6854 "Detoxification of Reactive Oxygen Species";"Ethylene biosynthesis III (microbes)" ID=BGER019864-PA|Name=BGER019864-PA 4 MetaCyc: PWY-7193;KEGG: 00240+2.7.1.48;KEGG: 00983+2.7.1.48;Reactome: R-HSA-73614 "Pyrimidine ribonucleosides salvage I";"Pyrimidine metabolism";"Drug metabolism - other enzymes";"Pyrimidine salvage" ID=BGER018339-PA|Name=BGER018339-PA 3 MetaCyc: PWY-5963;KEGG: 00790+2.8.1.9;Reactome: R-HSA-947581 "Thio-molybdenum cofactor biosynthesis";"Folate biosynthesis";"Molybdenum cofactor biosynthesis" ID=BGER000484-PA|Name=BGER000484-PA 1 Reactome: R-HSA-69273 "Cyclin A/B1/B2 associated events during G2/M transition" ID=BGER022545-PA|Name=BGER022545-PA 14 MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199 "Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation" ID=BGER028528-PA|Name=BGER028528-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" ID=BGER022017-PB|Name=BGER022017-PB 7 Reactome: R-HSA-606279;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257 "Deposition of new CENPA-containing nucleosomes at the centromere";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion" ID=BGER028132-PA|Name=BGER028132-PA 1 Reactome: R-HSA-203615 "eNOS activation" ID=BGER013941-PA|Name=BGER013941-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER028704-PA|Name=BGER028704-PA 42 Reactome: R-HSA-5334118;Reactome: R-HSA-73772;Reactome: R-HSA-427359;Reactome: R-HSA-3214841;Reactome: R-HSA-4551638;Reactome: R-HSA-3214842;Reactome: R-HSA-977225;Reactome: R-HSA-9610379;Reactome: R-HSA-606279;Reactome: R-HSA-2299718;Reactome: R-HSA-427413;Reactome: R-HSA-9616222;Reactome: R-HSA-3214815;Reactome: R-HSA-110330;Reactome: R-HSA-5250924;Reactome: R-HSA-2559580;Reactome: R-HSA-8936459;Reactome: R-HSA-5625886;Reactome: R-HSA-1221632;Reactome: R-HSA-5578749;Reactome: R-HSA-73728;Reactome: R-HSA-2559582;Reactome: R-HSA-1912408;Reactome: R-HSA-5693571;Reactome: R-HSA-5693607;Reactome: R-HSA-5617472;Reactome: R-HSA-427389;Reactome: R-HSA-110328;Reactome: R-HSA-201722;Reactome: R-HSA-110329;Reactome: R-HSA-8939236;Reactome: R-HSA-69473;Reactome: R-HSA-171306;Reactome: R-HSA-9018519;Reactome: R-HSA-9609690;Reactome: R-HSA-212300;Reactome: R-HSA-3214858;Reactome: R-HSA-110331;Reactome: R-HSA-2559586;Reactome: R-HSA-3214847;Reactome: R-HSA-912446;Reactome: R-HSA-5693565 "DNA methylation";"RNA Polymerase I Promoter Escape";"SIRT1 negatively regulates rRNA expression";"PKMTs methylate histone lysines";"SUMOylation of chromatin organization proteins";"HDMs demethylate histones";"Amyloid fiber formation";"HCMV Late Events";"Deposition of new CENPA-containing nucleosomes at the centromere";"Condensation of Prophase Chromosomes";"NoRC negatively regulates rRNA expression";"Transcriptional regulation of granulopoiesis";"HDACs deacetylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"B-WICH complex positively regulates rRNA expression";"Oxidative Stress Induced Senescence";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Meiotic synapsis";"Transcriptional regulation by small RNAs";"RNA Polymerase I Promoter Opening";"Senescence-Associated Secretory Phenotype (SASP)";"Pre-NOTCH Transcription and Translation";"Nonhomologous End-Joining (NHEJ)";"Processing of DNA double-strand break ends";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Formation of the beta-catenin:TCF transactivating complex";"Cleavage of the damaged pyrimidine";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"G2/M DNA damage checkpoint";"Packaging Of Telomere Ends";"Estrogen-dependent gene expression";"HCMV Early Events";"PRC2 methylates histones and DNA";"RMTs methylate histone arginines";"Cleavage of the damaged purine";"DNA Damage/Telomere Stress Induced Senescence";"HATs acetylate histones";"Meiotic recombination";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" ID=BGER003250-PA|Name=BGER003250-PA 1 Reactome: R-HSA-5632928 "Defective Mismatch Repair Associated With MSH2" ID=BGER007493-PA|Name=BGER007493-PA 4 Reactome: R-HSA-3232142;Reactome: R-HSA-983168;Reactome: R-HSA-1234176;Reactome: R-HSA-8951664 "SUMOylation of ubiquitinylation proteins";"Antigen processing: Ubiquitination & Proteasome degradation";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Neddylation" ID=BGER002937-PA|Name=BGER002937-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER018362-PA|Name=BGER018362-PA 2 Reactome: R-HSA-380270;Reactome: R-HSA-380320 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes" ID=BGER003073-PA|Name=BGER003073-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER028049-PA|Name=BGER028049-PA 1 Reactome: R-HSA-8873719 "RAB geranylgeranylation" ID=BGER012216-PA|Name=BGER012216-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER004182-PA|Name=BGER004182-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" ID=BGER004141-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER000250-PA|Name=BGER000250-PA 1 MetaCyc: PWY-7942 "5-oxo-L-proline metabolism" ID=BGER003889-PA|Name=BGER003889-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" ID=BGER005582-PA|Name=BGER005582-PA 4 Reactome: R-HSA-72764;Reactome: R-HSA-6790901;Reactome: R-HSA-156581;Reactome: R-HSA-6782315 "Eukaryotic Translation Termination";"rRNA modification in the nucleus and cytosol";"Methylation";"tRNA modification in the nucleus and cytosol" ID=BGER014058-PA|Name=BGER014058-PA 1 Reactome: R-HSA-5689877 "Josephin domain DUBs" ID=BGER001000-PA|Name=BGER001000-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER002222-PA|Name=BGER002222-PA 5 Reactome: R-HSA-8856828;Reactome: R-HSA-6811440;Reactome: R-HSA-6798695;Reactome: R-HSA-432722;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Retrograde transport at the Trans-Golgi-Network";"Neutrophil degranulation";"Golgi Associated Vesicle Biogenesis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER014614-PA|Name=BGER014614-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-6798695 "Neddylation";"Neutrophil degranulation" ID=BGER003063-PA|Name=BGER003063-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER024497-PA|Name=BGER024497-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER005719-PA|Name=BGER005719-PA 5 MetaCyc: PWY-7979;MetaCyc: PWY-7922;MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109;KEGG: 00514+2.4.1.109 "Protein O-mannosylation III (mammals, core M3)";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis";"Other types of O-glycan biosynthesis" ID=BGER024490-PA|Name=BGER024490-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER010595-PA|Name=BGER010595-PA 5 Reactome: R-HSA-9033241;MetaCyc: PWY-7782;Reactome: R-HSA-9033500;Reactome: R-HSA-75896;KEGG: 00565+2.5.1.26 "Peroxisomal protein import";"Plasmalogen biosynthesis";"TYSND1 cleaves peroxisomal proteins";"Plasmalogen biosynthesis";"Ether lipid metabolism" ID=BGER027058-PA|Name=BGER027058-PA 6 Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" ID=BGER021200-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER018067-PA|Name=BGER018067-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER015082-PA|Name=BGER015082-PA 5 Reactome: R-HSA-389960;Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-390450 "Formation of tubulin folding intermediates by CCT/TriC";"Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Folding of actin by CCT/TriC" ID=BGER028883-PA|Name=BGER028883-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER026813-PA|Name=BGER026813-PA 7 Reactome: R-HSA-8854518;Reactome: R-HSA-380270;Reactome: R-HSA-380320;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380284;Reactome: R-HSA-380259 "AURKA Activation by TPX2";"Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Loss of proteins required for interphase microtubule organization from the centrosome";"Loss of Nlp from mitotic centrosomes" ID=BGER019107-PA|Name=BGER019107-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER007597-PA|Name=BGER007597-PA 14 Reactome: R-HSA-2467813;Reactome: R-HSA-380284;Reactome: R-HSA-5663220;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-380259;Reactome: R-HSA-141444;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-8854518;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-8852276 "Separation of Sister Chromatids";"Loss of proteins required for interphase microtubule organization from the centrosome";"RHO GTPases Activate Formins";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"AURKA Activation by TPX2";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"The role of GTSE1 in G2/M progression after G2 checkpoint" ID=BGER018209-PA|Name=BGER018209-PA 4 Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-9010553 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs" ID=BGER012094-PA|Name=BGER012094-PA 5 MetaCyc: PWY-7268;Reactome: R-HSA-196807;KEGG: 00760+2.7.1.23;MetaCyc: PWY-5083;MetaCyc: PWY-7269 "NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Nicotinate metabolism";"Nicotinate and nicotinamide metabolism";"NAD/NADH phosphorylation and dephosphorylation";"NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)" ID=BGER004436-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER018184-PA|Name=BGER018184-PA 7 MetaCyc: PWY-7214;MetaCyc: PWY-5461;MetaCyc: PWY-5469;MetaCyc: PWY-6824;MetaCyc: PWY-5466;MetaCyc: PWY-7445;KEGG: 00940+1.11.1.7 "Baicalein degradation (hydrogen peroxide detoxification)";"Betanidin degradation";"Sesamin biosynthesis";"Justicidin B biosynthesis";"Matairesinol biosynthesis";"Luteolin triglucuronide degradation";"Phenylpropanoid biosynthesis" ID=BGER027521-PA|Name=BGER027521-PA 4 MetaCyc: PWY-5912;KEGG: 00270+2.5.1.6;MetaCyc: PWY-5041;Reactome: R-HSA-156581 "2'-deoxymugineic acid phytosiderophore biosynthesis";"Cysteine and methionine metabolism";"S-adenosyl-L-methionine cycle II";"Methylation" ID=BGER002353-PA|Name=BGER002353-PA 5 Reactome: R-HSA-189085;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;MetaCyc: PWY-7822;MetaCyc: PWY-6855 "Digestion of dietary carbohydrate";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Chitin degradation III (Serratia)";"Chitin degradation I (archaea)" ID=BGER017760-PA|Name=BGER017760-PA 6 Reactome: R-HSA-8936459;Reactome: R-HSA-5617472;Reactome: R-HSA-3214841;Reactome: R-HSA-8951664;Reactome: R-HSA-3769402;Reactome: R-HSA-201722 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"PKMTs methylate histone lysines";"Neddylation";"Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER010530-PA|Name=BGER010530-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER001088-PA|Name=BGER001088-PA 26 Reactome: R-HSA-389977;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-380320;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-2500257;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-389960;Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-5626467;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813 "Post-chaperonin tubulin folding pathway";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Recruitment of NuMA to mitotic centrosomes";"COPI-mediated anterograde transport";"HCMV Early Events";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Resolution of Sister Chromatid Cohesion";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Formation of tubulin folding intermediates by CCT/TriC";"Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"RHO GTPases activate IQGAPs";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"RHO GTPases Activate Formins";"Separation of Sister Chromatids" ID=BGER015797-PA|Name=BGER015797-PA 3 Reactome: R-HSA-3928662;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "EPHB-mediated forward signaling";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER022791-PA|Name=BGER022791-PA 2 Reactome: R-HSA-6785470;Reactome: R-HSA-6784531 "tRNA processing in the mitochondrion";"tRNA processing in the nucleus" ID=BGER014455-PA|Name=BGER014455-PA 2 Reactome: R-HSA-5620924;Reactome: R-HSA-5610787 "Intraflagellar transport";"Hedgehog 'off' state" ID=BGER019539-PA|Name=BGER019539-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER007658-PA|Name=BGER007658-PA 6 MetaCyc: PWY-7391;Reactome: R-HSA-191273;KEGG: 00900+2.7.1.36;Reactome: R-HSA-2426168;MetaCyc: PWY-922;MetaCyc: PWY-6174 "Isoprene biosynthesis II (engineered)";"Cholesterol biosynthesis";"Terpenoid backbone biosynthesis";"Activation of gene expression by SREBF (SREBP)";"Mevalonate pathway I";"Mevalonate pathway II (archaea)" ID=BGER026095-PA|Name=BGER026095-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER006426-PA|Name=BGER006426-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-8856825;Reactome: R-HSA-6781823;Reactome: R-HSA-8951664 "DNA Damage Recognition in GG-NER";"Cargo recognition for clathrin-mediated endocytosis";"Formation of TC-NER Pre-Incision Complex";"Neddylation" ID=BGER018168-PA|Name=BGER018168-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" ID=BGER020467-PA|Name=BGER020467-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER025213-PA|Name=BGER025213-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER000802-PA|Name=BGER000802-PA 1 KEGG: 00051+4.2.1.68 "Fructose and mannose metabolism" ID=BGER019364-PA|Name=BGER019364-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" ID=BGER003631-PA|Name=BGER003631-PA 5 Reactome: R-HSA-373080;Reactome: R-HSA-5620922;Reactome: R-HSA-5635838;Reactome: R-HSA-5632684;Reactome: R-HSA-5610787 "Class B/2 (Secretin family receptors)";"BBSome-mediated cargo-targeting to cilium";"Activation of SMO";"Hedgehog 'on' state";"Hedgehog 'off' state" ID=BGER012013-PA|Name=BGER012013-PA 1 Reactome: R-HSA-5673001 "RAF/MAP kinase cascade" ID=BGER007689-PA|Name=BGER007689-PA 6 MetaCyc: PWY-6952;MetaCyc: PWY-4261;Reactome: R-HSA-163560;MetaCyc: PWY-6118;Reactome: R-HSA-1483166;KEGG: 00564+1.1.5.3 "Glycerophosphodiester degradation";"Glycerol degradation I";"Triglyceride catabolism";"Glycerol-3-phosphate shuttle";"Synthesis of PA";"Glycerophospholipid metabolism" ID=BGER006216-PA|Name=BGER006216-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER026129-PA|Name=BGER026129-PA 4 Reactome: R-HSA-112308;Reactome: R-HSA-419037;Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Presynaptic depolarization and calcium channel opening";"NCAM1 interactions";"Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" ID=BGER001942-PA|Name=BGER001942-PA 16 Reactome: R-HSA-179409;Reactome: R-HSA-174178;Reactome: R-HSA-2467813;Reactome: R-HSA-176409;Reactome: R-HSA-2559582;Reactome: R-HSA-176408;Reactome: R-HSA-8853884;Reactome: R-HSA-174048;Reactome: R-HSA-174084;Reactome: R-HSA-141430;Reactome: R-HSA-983168;Reactome: R-HSA-176412;Reactome: R-HSA-69017;Reactome: R-HSA-174184;Reactome: R-HSA-174154;Reactome: R-HSA-176407 "APC-Cdc20 mediated degradation of Nek2A";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Separation of Sister Chromatids";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Senescence-Associated Secretory Phenotype (SASP)";"Regulation of APC/C activators between G1/S and early anaphase";"Transcriptional Regulation by VENTX";"APC/C:Cdc20 mediated degradation of Cyclin B";"Autodegradation of Cdh1 by Cdh1:APC/C";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Antigen processing: Ubiquitination & Proteasome degradation";"Phosphorylation of the APC/C";"CDK-mediated phosphorylation and removal of Cdc6";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Securin";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase" ID=BGER004286-PA|Name=BGER004286-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-9633012 "Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER001024-PA|Name=BGER001024-PA 2 Reactome: R-HSA-446203;Reactome: R-HSA-1799339 "Asparagine N-linked glycosylation";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER014622-PA|Name=BGER014622-PA 8 KEGG: 00250+4.3.2.1;MetaCyc: PWY-4983;MetaCyc: PWY-5;MetaCyc: PWY-7400;MetaCyc: PWY-5154;MetaCyc: PWY-4984;Reactome: R-HSA-70635;KEGG: 00220+4.3.2.1 "Alanine, aspartate and glutamate metabolism";"Nitric oxide biosynthesis II (mammals)";"Canavanine biosynthesis";"L-arginine biosynthesis IV (archaebacteria)";"L-arginine biosynthesis III (via N-acetyl-L-citrulline)";"Urea cycle";"Urea cycle";"Arginine biosynthesis" ID=BGER019635-PA|Name=BGER019635-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689 "Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits" ID=BGER029047-PA|Name=BGER029047-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" ID=BGER026340-PA|Name=BGER026340-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018127-PA|Name=BGER018127-PA 4 KEGG: 00480+1.1.1.49;KEGG: 00030+1.1.1.49;MetaCyc: PWY-8004;MetaCyc: PWY-7268 "Glutathione metabolism";"Pentose phosphate pathway";"Entner-Doudoroff pathway I";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)" ID=BGER008006-PA|Name=BGER008006-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER024488-PA|Name=BGER024488-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER013766-PA|Name=BGER013766-PA 1 Reactome: R-HSA-6785807 "Interleukin-4 and Interleukin-13 signaling" ID=BGER001421-PA|Name=BGER001421-PA 4 Reactome: R-HSA-176974;Reactome: R-HSA-69205;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Unwinding of DNA";"G1/S-Specific Transcription";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" ID=BGER028526-PA|Name=BGER028526-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER003603-PA|Name=BGER003603-PA 1 Reactome: R-HSA-8874211 "CREB3 factors activate genes" ID=BGER008912-PA|Name=BGER008912-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER012575-PA|Name=BGER012575-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER013078-PA|Name=BGER013078-PA 5 Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-77387 "Amino acids regulate mTORC1";"Ion channel transport";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Insulin receptor recycling" ID=BGER011154-PA|Name=BGER011154-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER014653-PA|Name=BGER014653-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" ID=BGER026351-PA|Name=BGER026351-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER026140-PA|Name=BGER026140-PA 4 Reactome: R-HSA-2470946;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-2468052 "Cohesin Loading onto Chromatin";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"Establishment of Sister Chromatid Cohesion" ID=BGER017383-PA|Name=BGER017383-PA 8 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-418889;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Caspase activation via Dependence Receptors in the absence of ligand";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway" ID=BGER023138-PA|Name=BGER023138-PA 33 Reactome: R-HSA-9648025;Reactome: R-HSA-168276;Reactome: R-HSA-141444;Reactome: R-HSA-9610379;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-5663220;Reactome: R-HSA-170822;Reactome: R-HSA-68877;Reactome: R-HSA-5578749;Reactome: R-HSA-3371453;Reactome: R-HSA-159227;Reactome: R-HSA-4085377;Reactome: R-HSA-2500257;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-159230;Reactome: R-HSA-2467813;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-3301854;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-1169408 "EML4 and NUDC in mitotic spindle formation";"NS1 Mediated Effects on Host Pathways";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"HCMV Late Events";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"RHO GTPases Activate Formins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Mitotic Prometaphase";"Transcriptional regulation by small RNAs";"Regulation of HSF1-mediated heat shock response";"Transport of the SLBP independent Mature mRNA";"SUMOylation of SUMOylation proteins";"Resolution of Sister Chromatid Cohesion";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of the SLBP Dependant Mature mRNA";"Separation of Sister Chromatids";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear Pore Complex (NPC) Disassembly";"HCMV Early Events";"SUMOylation of DNA replication proteins";"ISG15 antiviral mechanism" ID=BGER007230-PA|Name=BGER007230-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER023401-PA|Name=BGER023401-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER008753-PA|Name=BGER008753-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER021056-PA|Name=BGER021056-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER022315-PA|Name=BGER022315-PA 2 Reactome: R-HSA-380270;Reactome: R-HSA-380320 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes" ID=BGER011082-PA|Name=BGER011082-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" ID=BGER003614-PA|Name=BGER003614-PA 11 KEGG: 00561+3.1.3.4;MetaCyc: PWY-8051;MetaCyc: PWY-7782;MetaCyc: PWY-8053;KEGG: 00600+3.1.3.4;MetaCyc: PWY-6453;MetaCyc: PWY-8052;Reactome: R-HSA-2029485;MetaCyc: PWY-8055;KEGG: 00565+3.1.3.4;KEGG: 00564+3.1.3.4 "Glycerolipid metabolism";"Anandamide biosynthesis I";"Plasmalogen biosynthesis";"Anandamide biosynthesis II";"Sphingolipid metabolism";"Stigma estolide biosynthesis";"2-arachidonoylglycerol biosynthesis";"Role of phospholipids in phagocytosis";"Palmitoyl ethanolamide biosynthesis";"Ether lipid metabolism";"Glycerophospholipid metabolism" ID=BGER026536-PA|Name=BGER026536-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" ID=BGER024393-PA|Name=BGER024393-PA 3 Reactome: R-HSA-196807;Reactome: R-HSA-74259;Reactome: R-HSA-73621 "Nicotinate metabolism";"Purine catabolism";"Pyrimidine catabolism" ID=BGER009653-PA|Name=BGER009653-PA 4 Reactome: R-HSA-162699;Reactome: R-HSA-4719360;Reactome: R-HSA-4717374;Reactome: R-HSA-4719377 "Synthesis of dolichyl-phosphate mannose";"Defective DPM3 causes DPM3-CDG (CDG-1o)";"Defective DPM1 causes DPM1-CDG (CDG-1e)";"Defective DPM2 causes DPM2-CDG (CDG-1u)" ID=BGER011151-PA|Name=BGER011151-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER008883-PA|Name=BGER008883-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" ID=BGER025583-PA|Name=BGER025583-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER019759-PA|Name=BGER019759-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER012815-PA|Name=BGER012815-PA 2 Reactome: R-HSA-977225;Reactome: R-HSA-8854214 "Amyloid fiber formation";"TBC/RABGAPs" ID=BGER010266-PA|Name=BGER010266-PA 6 KEGG: 00604+3.2.1.23;KEGG: 00600+3.2.1.23;KEGG: 00531+3.2.1.23;KEGG: 00511+3.2.1.23;KEGG: 00052+3.2.1.23;MetaCyc: PWY-6807 "Glycosphingolipid biosynthesis - ganglio series";"Sphingolipid metabolism";"Glycosaminoglycan degradation";"Other glycan degradation";"Galactose metabolism";"Xyloglucan degradation II (exoglucanase)" ID=BGER001433-PA|Name=BGER001433-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER010725-PA|Name=BGER010725-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" ID=BGER027072-PA|Name=BGER027072-PA 1 Reactome: R-HSA-430039 "mRNA decay by 5' to 3' exoribonuclease" ID=BGER012757-PA|Name=BGER012757-PA 2 Reactome: R-HSA-5632681;Reactome: R-HSA-5635838 "Ligand-receptor interactions";"Activation of SMO" ID=BGER014394-PA|Name=BGER014394-PA 14 MetaCyc: PWY-5667;MetaCyc: PWY-5981;MetaCyc: PWY-7587;KEGG: 00564+2.3.1.51;Reactome: R-HSA-1483166;MetaCyc: PWY-8055;MetaCyc: PWY-8053;MetaCyc: PWY-6453;MetaCyc: PWY-7589;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7417;MetaCyc: PWY-7411;MetaCyc: PWY-8051;MetaCyc: PWY-7782 "CDP-diacylglycerol biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)";"Glycerophospholipid metabolism";"Synthesis of PA";"Palmitoyl ethanolamide biosynthesis";"Anandamide biosynthesis II";"Stigma estolide biosynthesis";"Palmitoleate biosynthesis III (cyanobacteria)";"Glycerolipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Phosphatidate biosynthesis (yeast)";"Anandamide biosynthesis I";"Plasmalogen biosynthesis" ID=BGER021820-PA|Name=BGER021820-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-5694530 "COPII-mediated vesicle transport";"Cargo concentration in the ER" ID=BGER013737-PA|Name=BGER013737-PA 6 Reactome: R-HSA-428930;Reactome: R-HSA-416476;Reactome: R-HSA-456926;Reactome: R-HSA-418592;Reactome: R-HSA-399997;Reactome: R-HSA-434316 "Thromboxane signalling through TP receptor";"G alpha (q) signalling events";"Thrombin signalling through proteinase activated receptors (PARs)";"ADP signalling through P2Y purinoceptor 1";"Acetylcholine regulates insulin secretion";"Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion" ID=BGER016605-PA|Name=BGER016605-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER026296-PA|Name=BGER026296-PA 2 Reactome: R-HSA-194840;Reactome: R-HSA-8876198 "Rho GTPase cycle";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER002791-PA|Name=BGER002791-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER007494-PA|Name=BGER007494-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" ID=BGER004230-PA|Name=BGER004230-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER021366-PA|Name=BGER021366-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER001782-PA|Name=BGER001782-PA 5 Reactome: R-HSA-5625740;Reactome: R-HSA-75035;Reactome: R-HSA-1445148;Reactome: R-HSA-5628897;Reactome: R-HSA-111447 "RHO GTPases activate PKNs";"Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"TP53 Regulates Metabolic Genes";"Activation of BAD and translocation to mitochondria" ID=BGER004302-PA|Name=BGER004302-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-6807878;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport";"Intra-Golgi traffic" ID=BGER028355-PA|Name=BGER028355-PA 1 Reactome: R-HSA-1483148 "Synthesis of PG" ID=BGER019854-PA|Name=BGER019854-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER010290-PA|Name=BGER010290-PA 7 Reactome: R-HSA-5628897;Reactome: R-HSA-1632852;Reactome: R-HSA-166208;Reactome: R-HSA-380972;Reactome: R-HSA-9639288;Reactome: R-HSA-8943724;Reactome: R-HSA-165159 "TP53 Regulates Metabolic Genes";"Macroautophagy";"mTORC1-mediated signalling";"Energy dependent regulation of mTOR by LKB1-AMPK";"Amino acids regulate mTORC1";"Regulation of PTEN gene transcription";"mTOR signalling" ID=BGER018084-PA|Name=BGER018084-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER012627-PA|Name=BGER012627-PA 4 Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3;KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219 "Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis" ID=BGER019033-PA|Name=BGER019033-PA 2 Reactome: R-HSA-425393;Reactome: R-HSA-5223345 "Transport of inorganic cations/anions and amino acids/oligopeptides";"Miscellaneous transport and binding events" ID=BGER009788-PA|Name=BGER009788-PA 13 Reactome: R-HSA-1650814;Reactome: R-HSA-1474244;Reactome: R-HSA-3000171;Reactome: R-HSA-1442490;Reactome: R-HSA-2214320;Reactome: R-HSA-2243919;Reactome: R-HSA-186797;Reactome: R-HSA-216083;Reactome: R-HSA-3000178;Reactome: R-HSA-419037;Reactome: R-HSA-3000157;Reactome: R-HSA-2022090;Reactome: R-HSA-8948216 "Collagen biosynthesis and modifying enzymes";"Extracellular matrix organization";"Non-integrin membrane-ECM interactions";"Collagen degradation";"Anchoring fibril formation";"Crosslinking of collagen fibrils";"Signaling by PDGF";"Integrin cell surface interactions";"ECM proteoglycans";"NCAM1 interactions";"Laminin interactions";"Assembly of collagen fibrils and other multimeric structures";"Collagen chain trimerization" ID=BGER010652-PA|Name=BGER010652-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER025429-PA|Name=BGER025429-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER026127-PA|Name=BGER026127-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER008777-PA|Name=BGER008777-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" ID=BGER015121-PA|Name=BGER015121-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER007647-PA|Name=BGER007647-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811438 "COPI-mediated anterograde transport";"Intra-Golgi traffic" ID=BGER021843-PA|Name=BGER021843-PA 1 MetaCyc: PWY-7437 "Protein O-[N-acetyl]-glucosylation" ID=BGER019561-PA|Name=BGER019561-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER027187-PA|Name=BGER027187-PA 16 Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72702;Reactome: R-HSA-6791226 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER020533-PA|Name=BGER020533-PA 1 Reactome: R-HSA-2393930 "Phosphate bond hydrolysis by NUDT proteins" ID=BGER001357-PA|Name=BGER001357-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER010848-PA|Name=BGER010848-PA 52 Reactome: R-HSA-1834949;Reactome: R-HSA-76042;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-112382;Reactome: R-HSA-76061;Reactome: R-HSA-76071;Reactome: R-HSA-75955;Reactome: R-HSA-9018519;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-73780;Reactome: R-HSA-203927;Reactome: R-HSA-73762;Reactome: R-HSA-8851708;Reactome: R-HSA-749476;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-113418;Reactome: R-HSA-6782210;Reactome: R-HSA-73980;Reactome: R-HSA-6781823;Reactome: R-HSA-167160;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-5617472;Reactome: R-HSA-77075;Reactome: R-HSA-5250924;Reactome: R-HSA-72165;Reactome: R-HSA-5578749;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-5601884;Reactome: R-HSA-427413;Reactome: R-HSA-674695;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-167172;Reactome: R-HSA-6803529;Reactome: R-HSA-167243;Reactome: R-HSA-76066;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-73772;Reactome: R-HSA-167161;Reactome: R-HSA-73863;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-167238;Reactome: R-HSA-167158 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"Formation of RNA Pol II elongation complex";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase II Transcription Elongation";"Estrogen-dependent gene expression";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Polymerase III Chain Elongation";"MicroRNA (miRNA) biogenesis";"RNA Polymerase I Transcription Initiation";"Signaling by FGFR2 IIIa TM";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Formation of the Early Elongation Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase III Transcription Termination";"Formation of TC-NER Pre-Incision Complex";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Pol II CTD phosphorylation and interaction with CE";"B-WICH complex positively regulates rRNA expression";"mRNA Splicing - Minor Pathway";"Transcriptional regulation by small RNAs";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"PIWI-interacting RNA (piRNA) biogenesis";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Pre-transcription Events";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Transcription of the HIV genome";"FGFR2 alternative splicing";"Tat-mediated HIV elongation arrest and recovery";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"RNA Polymerase I Promoter Escape";"HIV Transcription Initiation";"RNA Polymerase I Transcription Termination";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex" ID=BGER006987-PA|Name=BGER006987-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER020189-PA|Name=BGER020189-PA 56 Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084 "Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Ub-specific processing proteases";"Degradation of DVL";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of AXIN";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C" ID=BGER015998-PA|Name=BGER015998-PA 3 Reactome: R-HSA-72165;Reactome: R-HSA-191859;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"snRNP Assembly";"mRNA Splicing - Major Pathway" ID=BGER029046-PA|Name=BGER029046-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER015011-PA|Name=BGER015011-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER017765-PA|Name=BGER017765-PA 14 Reactome: R-HSA-205043;Reactome: R-HSA-2979096;Reactome: R-HSA-9017802;Reactome: R-HSA-2122948;Reactome: R-HSA-6798695;Reactome: R-HSA-1474228;Reactome: R-HSA-2644606;Reactome: R-HSA-1251985;Reactome: R-HSA-2894862;Reactome: R-HSA-193692;Reactome: R-HSA-3928665;Reactome: R-HSA-9013700;Reactome: R-HSA-977225;Reactome: R-HSA-9013507 "NRIF signals cell death from the nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Noncanonical activation of NOTCH3";"Activated NOTCH1 Transmits Signal to the Nucleus";"Neutrophil degranulation";"Degradation of the extracellular matrix";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Nuclear signaling by ERBB4";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Regulated proteolysis of p75NTR";"EPH-ephrin mediated repulsion of cells";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Amyloid fiber formation";"NOTCH3 Activation and Transmission of Signal to the Nucleus" ID=BGER019372-PA|Name=BGER019372-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" ID=BGER023675-PA|Name=BGER023675-PA 56 Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-5658442;Reactome: R-HSA-69481;Reactome: R-HSA-5610780 "APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"UCH proteinases";"Activation of NF-kappaB in B cells";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"Degradation of AXIN";"Separation of Sister Chromatids";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RAS by GAPs";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome" ID=BGER010385-PA|Name=BGER010385-PA 2 Reactome: R-HSA-110320;Reactome: R-HSA-983168 "Translesion Synthesis by POLH";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER022560-PA|Name=BGER022560-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER021736-PA|Name=BGER021736-PA 6 Reactome: R-HSA-1222556;Reactome: R-HSA-6798695;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Neutrophil degranulation";"Ion channel transport";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Insulin receptor recycling" ID=BGER013465-PA|Name=BGER013465-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER007278-PA|Name=BGER007278-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER003415-PA|Name=BGER003415-PA 6 Reactome: R-HSA-68884;Reactome: R-HSA-983189;KEGG: 00901+2.7.1.222;Reactome: R-HSA-2132295;Reactome: R-HSA-6811434;MetaCyc: PWY-7936 "Mitotic Telophase/Cytokinesis";"Kinesins";"Indole alkaloid biosynthesis";"MHC class II antigen presentation";"COPI-dependent Golgi-to-ER retrograde traffic";"Psilocybin biosynthesis" ID=BGER019141-PA|Name=BGER019141-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" ID=BGER021182-PA|Name=BGER021182-PA 4 MetaCyc: PWY-7382;KEGG: 00785+2.3.1.181;MetaCyc: PWY-6987;Reactome: R-HSA-389661 "Lipoate biosynthesis and incorporation IV (yeast)";"Lipoic acid metabolism";"Lipoate biosynthesis and incorporation III (Bacillus)";"Glyoxylate metabolism and glycine degradation" ID=BGER002651-PA|Name=BGER002651-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER008322-PA|Name=BGER008322-PA 7 Reactome: R-HSA-3371497;Reactome: R-HSA-2132295;Reactome: R-HSA-1474228;Reactome: R-HSA-1442490;Reactome: R-HSA-6811436;Reactome: R-HSA-983231;Reactome: R-HSA-6807878 "HSP90 chaperone cycle for steroid hormone receptors (SHR)";"MHC class II antigen presentation";"Degradation of the extracellular matrix";"Collagen degradation";"COPI-independent Golgi-to-ER retrograde traffic";"Factors involved in megakaryocyte development and platelet production";"COPI-mediated anterograde transport" ID=BGER029663-PA|Name=BGER029663-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER028110-PA|Name=BGER028110-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER022465-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER002956-PA|Name=BGER002956-PA 2 KEGG: 00620+3.6.1.7;KEGG: 00627+3.6.1.7 "Pyruvate metabolism";"Aminobenzoate degradation" ID=BGER020805-PA|Name=BGER020805-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER028886-PA|Name=BGER028886-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER026905-PA|Name=BGER026905-PA 10 Reactome: R-HSA-9627069;Reactome: R-HSA-3299685;Reactome: R-HSA-2151201;Reactome: R-HSA-111463;Reactome: R-HSA-111458;Reactome: R-HSA-5628897;Reactome: R-HSA-611105;Reactome: R-HSA-111459;Reactome: R-HSA-111457;Reactome: R-HSA-111464 "Regulation of the apoptosome activity";"Detoxification of Reactive Oxygen Species";"Transcriptional activation of mitochondrial biogenesis";"SMAC (DIABLO) binds to IAPs";"Formation of apoptosome";"TP53 Regulates Metabolic Genes";"Respiratory electron transport";"Activation of caspases through apoptosome-mediated cleavage";"Release of apoptotic factors from the mitochondria";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes" ID=BGER020488-PA|Name=BGER020488-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER013626-PA|Name=BGER013626-PA 4 MetaCyc: PWY-5041;Reactome: R-HSA-156581;MetaCyc: PWY-5912;KEGG: 00270+2.5.1.6 "S-adenosyl-L-methionine cycle II";"Methylation";"2'-deoxymugineic acid phytosiderophore biosynthesis";"Cysteine and methionine metabolism" ID=BGER016141-PC|Name=BGER016141-PC 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER011618-PA|Name=BGER011618-PA 2 Reactome: R-HSA-390522;Reactome: R-HSA-445355 "Striated Muscle Contraction";"Smooth Muscle Contraction" ID=BGER001170-PA|Name=BGER001170-PA 1 Reactome: R-HSA-140342 "Apoptosis induced DNA fragmentation" ID=BGER025943-PA|Name=BGER025943-PA 4 Reactome: R-HSA-381771;Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-400511 "Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)";"Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)" ID=BGER000497-PA|Name=BGER000497-PA 24 Reactome: R-HSA-500657;Reactome: R-HSA-6814122;Reactome: R-HSA-163359;Reactome: R-HSA-418555;Reactome: R-HSA-392851;Reactome: R-HSA-381676;Reactome: R-HSA-416476;Reactome: R-HSA-456926;Reactome: R-HSA-9009391;Reactome: R-HSA-418597;Reactome: R-HSA-8964616;Reactome: R-HSA-418594;Reactome: R-HSA-4086398;Reactome: R-HSA-392170;Reactome: R-HSA-432040;Reactome: R-HSA-400042;Reactome: R-HSA-8964315;Reactome: R-HSA-392451;Reactome: R-HSA-428930;Reactome: R-HSA-420092;Reactome: R-HSA-202040;Reactome: R-HSA-416482;Reactome: R-HSA-418592;Reactome: R-HSA-418217 "Presynaptic function of Kainate receptors";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Glucagon signaling in metabolic regulation";"G alpha (s) signalling events";"Prostacyclin signalling through prostacyclin receptor";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"G alpha (q) signalling events";"Thrombin signalling through proteinase activated receptors (PARs)";"Extra-nuclear estrogen signaling";"G alpha (z) signalling events";"G beta:gamma signalling through CDC42";"G alpha (i) signalling events";"Ca2+ pathway";"ADP signalling through P2Y purinoceptor 12";"Vasopressin regulates renal water homeostasis via Aquaporins";"Adrenaline,noradrenaline inhibits insulin secretion";"G beta:gamma signalling through BTK";"G beta:gamma signalling through PI3Kgamma";"Thromboxane signalling through TP receptor";"Glucagon-type ligand receptors";"G-protein activation";"G alpha (12/13) signalling events";"ADP signalling through P2Y purinoceptor 1";"G beta:gamma signalling through PLC beta" ID=BGER028172-PA|Name=BGER028172-PA 1 Reactome: R-HSA-1296061 "HCN channels" ID=BGER018341-PA|Name=BGER018341-PA 2 KEGG: 00040+5.3.1.5;KEGG: 00051+5.3.1.5 "Pentose and glucuronate interconversions";"Fructose and mannose metabolism" ID=BGER018219-PA|Name=BGER018219-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER008842-PA|Name=BGER008842-PA 16 Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695 "Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex" ID=BGER008659-PA|Name=BGER008659-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER010738-PA|Name=BGER010738-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER013629-PA|Name=BGER013629-PA 5 KEGG: 00900+2.2.1.7;MetaCyc: PWY-6892;MetaCyc: PWY-7560;MetaCyc: PWY-6891;KEGG: 00730+2.2.1.7 "Terpenoid backbone biosynthesis";"Thiazole biosynthesis I (facultative anaerobic bacteria)";"Methylerythritol phosphate pathway II";"Thiazole biosynthesis II (aerobic bacteria)";"Thiamine metabolism" ID=BGER011931-PA|Name=BGER011931-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER004194-PA|Name=BGER004194-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER010190-PA|Name=BGER010190-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER024909-PA|Name=BGER024909-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER000383-PA|Name=BGER000383-PA 3 Reactome: R-HSA-418457;Reactome: R-HSA-4086398;Reactome: R-HSA-392517 "cGMP effects";"Ca2+ pathway";"Rap1 signalling" ID=BGER024855-PA|Name=BGER024855-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER014243-PA|Name=BGER014243-PA 1 Reactome: R-HSA-8854214 "TBC/RABGAPs" ID=BGER027460-PA|Name=BGER027460-PA 7 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway" ID=BGER021887-PA|Name=BGER021887-PA 3 KEGG: 00860+1.3.3.3;Reactome: R-HSA-189451;MetaCyc: PWY-7159 "Porphyrin and chlorophyll metabolism";"Heme biosynthesis";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)" ID=BGER003029-PA|Name=BGER003029-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER017956-PA|Name=BGER017956-PA 6 MetaCyc: PWY-6733;MetaCyc: PWY-7782;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER002819-PA|Name=BGER002819-PA 2 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines" ID=BGER026331-PA|Name=BGER026331-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021665-PA|Name=BGER021665-PA 2 Reactome: R-HSA-3299685;MetaCyc: PWY-6854 "Detoxification of Reactive Oxygen Species";"Ethylene biosynthesis III (microbes)" ID=BGER029043-PA|Name=BGER029043-PA 2 MetaCyc: PWY-5381;KEGG: 00760+2.7.1.173+2.7.1.22 "Pyridine nucleotide cycling (plants)";"Nicotinate and nicotinamide metabolism" ID=BGER022467-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER018922-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER009319-PA|Name=BGER009319-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER009025-PA|Name=BGER009025-PA 3 Reactome: R-HSA-72165;Reactome: R-HSA-72163;Reactome: R-HSA-191859 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway";"snRNP Assembly" ID=BGER003913-PC|Name=BGER003913-PC 4 Reactome: R-HSA-1268020;Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial protein import";"Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER000569-PA|Name=BGER000569-PA 2 Reactome: R-HSA-162710;KEGG: 00563+2.4.1.198 "Synthesis of glycosylphosphatidylinositol (GPI)";"Glycosylphosphatidylinositol (GPI)-anchor biosynthesis" ID=BGER003445-PA|Name=BGER003445-PA 1 Reactome: R-HSA-2428928 "IRS-related events triggered by IGF1R" ID=BGER013797-PA|Name=BGER013797-PA 3 Reactome: R-HSA-349425;MetaCyc: PWY-7511;Reactome: R-HSA-8951664 "Autodegradation of the E3 ubiquitin ligase COP1";"Protein ubiquitination";"Neddylation" ID=BGER012871-PA|Name=BGER012871-PA 33 MetaCyc: PWY-6333;KEGG: 00830+1.1.1.1;KEGG: 00626+1.1.1.1;MetaCyc: PWY-5076;KEGG: 00260+1.1.1.1;MetaCyc: PWY-6802;Reactome: R-HSA-71384;MetaCyc: PWY-5751;MetaCyc: PWY-6871;KEGG: 00350+1.1.1.1;MetaCyc: PWY-7396;MetaCyc: PWY-5082;MetaCyc: PWY-6587;MetaCyc: PWY-5057;KEGG: 00680+1.1.1.284;KEGG: 00982+1.1.1.1;KEGG: 00980+1.1.1.1;MetaCyc: PWY-3162;MetaCyc: PWY-5079;MetaCyc: PWY-1801;MetaCyc: PWY-7111;KEGG: 00625+1.1.1.1;MetaCyc: PWY-6313;KEGG: 00010+1.1.1.1;KEGG: 00071+1.1.1.1;MetaCyc: PWY-6342;MetaCyc: PWY-7798;MetaCyc: PWY-7118;KEGG: 00592+1.1.1.1;MetaCyc: PWY-5486;MetaCyc: PWY-5480;MetaCyc: PWY-5078;MetaCyc: PWY-7013 "Acetaldehyde biosynthesis I";"Retinol metabolism";"Naphthalene degradation";"L-leucine degradation III";"Glycine, serine and threonine metabolism";"Salidroside biosynthesis";"Ethanol oxidation";"Phenylethanol biosynthesis";"3-methylbutanol biosynthesis (engineered)";"Tyrosine metabolism";"Butanol and isobutanol biosynthesis (engineered)";"L-methionine degradation III";"Pyruvate fermentation to ethanol III";"L-valine degradation II";"Methane metabolism";"Drug metabolism - cytochrome P450";"Metabolism of xenobiotics by cytochrome P450";"L-tryptophan degradation V (side chain pathway)";"L-phenylalanine degradation III";"Formaldehyde oxidation II (glutathione-dependent)";"Pyruvate fermentation to isobutanol (engineered)";"Chloroalkane and chloroalkene degradation";"Serotonin degradation";"Glycolysis / Gluconeogenesis";"Fatty acid degradation";"Noradrenaline and adrenaline degradation";"Protein S-nitrosylation and denitrosylation";"Chitin degradation to ethanol";"alpha-Linolenic acid metabolism";"Pyruvate fermentation to ethanol II";"Pyruvate fermentation to ethanol I";"L-isoleucine degradation II";"(S)-propane-1,2-diol degradation" ID=BGER022238-PA|Name=BGER022238-PA 20 MetaCyc: PWY-735;KEGG: 00071+1.3.3.6;MetaCyc: PWY-7291;MetaCyc: PWY-6837;MetaCyc: PWY-7007;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7574;MetaCyc: PWY-7288;MetaCyc: PWY-7606;KEGG: 00592+1.3.3.6;MetaCyc: PWY-6920;MetaCyc: PWY-7338;KEGG: 00410+1.3.3.6;MetaCyc: PWY-7726;MetaCyc: PWY-5136;Reactome: R-HSA-9033241;MetaCyc: PWY-7858;MetaCyc: PWY-7337;MetaCyc: PWY-7854;MetaCyc: PWY-7340 "Jasmonic acid biosynthesis";"Fatty acid degradation";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"Methyl ketone biosynthesis (engineered)";"Propanoate metabolism";"Propanoyl-coa degradation II";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"alpha-Linolenic acid metabolism";"6-gingerol analog biosynthesis (engineered)";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"beta-Alanine metabolism";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Fatty acid beta-oxidation II (plant peroxisome)";"Peroxisomal protein import";"(5Z)-dodecenoate biosynthesis II";"10-cis-heptadecenoyl-CoA degradation (yeast)";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)" ID=BGER017243-PA|Name=BGER017243-PA 1 Reactome: R-HSA-163125 "Post-translational modification: synthesis of GPI-anchored proteins" ID=BGER014473-PA|Name=BGER014473-PA 16 Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits" ID=BGER006464-PA|Name=BGER006464-PA 14 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-168333;Reactome: R-HSA-5687128;Reactome: R-HSA-165054;Reactome: R-HSA-69273;Reactome: R-HSA-9634638;Reactome: R-HSA-141444;Reactome: R-HSA-2173788;Reactome: R-HSA-450520;Reactome: R-HSA-3769402;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"NEP/NS2 Interacts with the Cellular Export Machinery";"MAPK6/MAPK4 signaling";"Rev-mediated nuclear export of HIV RNA";"Cyclin A/B1/B2 associated events during G2/M transition";"Estrogen-dependent nuclear events downstream of ESR-membrane signaling";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Downregulation of TGF-beta receptor signaling";"HuR (ELAVL1) binds and stabilizes mRNA";"Deactivation of the beta-catenin transactivating complex";"RHO GTPases Activate Formins";"Separation of Sister Chromatids" ID=BGER011999-PA|Name=BGER011999-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER018540-PA|Name=BGER018540-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER017955-PA|Name=BGER017955-PA 2 KEGG: 00627+3.6.1.7;KEGG: 00620+3.6.1.7 "Aminobenzoate degradation";"Pyruvate metabolism" ID=BGER005676-PA|Name=BGER005676-PA 2 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines" ID=BGER001843-PA|Name=BGER001843-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER003299-PA|Name=BGER003299-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022472-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER018596-PA|Name=BGER018596-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER012489-PA|Name=BGER012489-PA 6 MetaCyc: PWY-6608;MetaCyc: PWY-7442;KEGG: 00230+3.5.4.3;MetaCyc: PWY-6606;Reactome: R-HSA-74259;MetaCyc: PWY-5497 "Guanosine nucleotides degradation III";"Drosopterin and aurodrosopterin biosynthesis";"Purine metabolism";"Guanosine nucleotides degradation II";"Purine catabolism";"Purine nucleobases degradation II (anaerobic)" ID=BGER018653-PB|Name=BGER018653-PB 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER020521-PA|Name=BGER020521-PA 3 Reactome: R-HSA-2299718;Reactome: R-HSA-3214841;Reactome: R-HSA-6804760 "Condensation of Prophase Chromosomes";"PKMTs methylate histone lysines";"Regulation of TP53 Activity through Methylation" ID=BGER011859-PA|Name=BGER011859-PA 57 Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603;Reactome: R-HSA-68827;Reactome: R-HSA-69601;Reactome: R-HSA-382556;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-6798695;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-5658442;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346 "TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"UCH proteinases";"CDT1 association with the CDC6:ORC:origin complex";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"ABC-family proteins mediated transport";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Neutrophil degranulation";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RAS by GAPs";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis" ID=BGER026425-PA|Name=BGER026425-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER025614-PA|Name=BGER025614-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER012252-PA|Name=BGER012252-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER022195-PA|Name=BGER022195-PA 4 Reactome: R-HSA-9020702;Reactome: R-HSA-937039;Reactome: R-HSA-975144;MetaCyc: PWY-7511 "Interleukin-1 signaling";"IRAK1 recruits IKK complex";"IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation";"Protein ubiquitination" ID=BGER027604-PA|Name=BGER027604-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER024315-PA|Name=BGER024315-PA 4 KEGG: 00970+6.1.1.18;Reactome: R-HSA-379716;Reactome: R-HSA-2408522;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism";"Mitochondrial tRNA aminoacylation" ID=BGER015473-PA|Name=BGER015473-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER016535-PA|Name=BGER016535-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER010692-PA|Name=BGER010692-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER008551-PA|Name=BGER008551-PA 7 Reactome: R-HSA-69202;Reactome: R-HSA-1538133;Reactome: R-HSA-156711;Reactome: R-HSA-1362277;Reactome: R-HSA-69205;Reactome: R-HSA-69656;Reactome: R-HSA-1362300 "Cyclin E associated events during G1/S transition";"G0 and Early G1";"Polo-like kinase mediated events";"Transcription of E2F targets under negative control by DREAM complex";"G1/S-Specific Transcription";"Cyclin A:Cdk2-associated events at S phase entry";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1" ID=BGER007605-PA|Name=BGER007605-PA 56 Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978 "Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of AXIN";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)" ID=BGER019536-PA|Name=BGER019536-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER001371-PA|Name=BGER001371-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER008663-PA|Name=Dicer-1 2 Reactome: R-HSA-426486;Reactome: R-HSA-203927 "Small interfering RNA (siRNA) biogenesis";"MicroRNA (miRNA) biogenesis" ID=BGER014812-PA|Name=BGER014812-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER006909-PA|Name=BGER006909-PA 5 Reactome: R-HSA-5579006;KEGG: 00270+6.3.2.3;KEGG: 00480+6.3.2.3;Reactome: R-HSA-174403;MetaCyc: PWY-8043 "Defective GSS causes Glutathione synthetase deficiency (GSS deficiency)";"Cysteine and methionine metabolism";"Glutathione metabolism";"Glutathione synthesis and recycling";"Ophthalmate biosynthesis" ID=BGER024323-PA|Name=BGER024323-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER016266-PA|Name=BGER016266-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER000506-PA|Name=BGER000506-PA 1 Reactome: R-HSA-6811436 "COPI-independent Golgi-to-ER retrograde traffic" ID=BGER023216-PA|Name=BGER023216-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER008523-PA|Name=BGER008523-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" ID=BGER022760-PA|Name=BGER022760-PA 1 Reactome: R-HSA-373753 "Nephrin family interactions" ID=BGER007474-PA|Name=BGER007474-PA 11 KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-9614657;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-380972;KEGG: 05165+2.7.11.1;Reactome: R-HSA-6804756;KEGG: 05163+2.7.11.1;Reactome: R-HSA-163680 "Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"FOXO-mediated transcription of cell death genes";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Energy dependent regulation of mTOR by LKB1-AMPK";"Human papillomavirus infection";"Regulation of TP53 Activity through Phosphorylation";"Human cytomegalovirus infection";"AMPK inhibits chREBP transcriptional activation activity" ID=BGER027162-PA|Name=BGER027162-PA 4 Reactome: R-HSA-5250958;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825;Reactome: R-HSA-6794361 "Toxicity of botulinum toxin type B (BoNT/B)";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis";"Neurexins and neuroligins" ID=BGER025605-PA|Name=BGER025605-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER005882-PA|Name=BGER005882-PA 40 Reactome: R-HSA-8851708;Reactome: R-HSA-203927;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-112382;Reactome: R-HSA-6807505;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-76042;Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-167160;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-113418;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-5601884;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-5578749;Reactome: R-HSA-72165;Reactome: R-HSA-72163;Reactome: R-HSA-168325;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167161;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-6803529;Reactome: R-HSA-167243;Reactome: R-HSA-167172 "Signaling by FGFR2 IIIa TM";"MicroRNA (miRNA) biogenesis";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex";"RNA polymerase II transcribes snRNA genes";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Formation of the Early Elongation Complex";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"PIWI-interacting RNA (piRNA) biogenesis";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"Transcriptional regulation by small RNAs";"mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway";"Viral Messenger RNA Synthesis";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"HIV Transcription Initiation";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"FGFR2 alternative splicing";"Tat-mediated HIV elongation arrest and recovery";"Transcription of the HIV genome" ID=BGER003962-PA|Name=BGER003962-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" ID=BGER019086-PA|Name=BGER019086-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" ID=BGER010653-PA|Name=BGER010653-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER027936-PA|Name=BGER027936-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER010140-PA|Name=BGER010140-PA 1 Reactome: R-HSA-9037629 "Lewis blood group biosynthesis" ID=BGER005262-PA|Name=BGER005262-PA 14 Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-141444;Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-6811436;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-8854518 "Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"COPI-independent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"AURKA Activation by TPX2" ID=BGER027030-PA|Name=BGER027030-PA 16 Reactome: R-HSA-2559580;Reactome: R-HSA-8936459;Reactome: R-HSA-8934593;Reactome: R-HSA-5628897;Reactome: R-HSA-2559585;Reactome: R-HSA-426496;Reactome: R-HSA-9018519;Reactome: R-HSA-8948700;Reactome: R-HSA-8986944;Reactome: R-HSA-8853884;Reactome: R-HSA-9022692;Reactome: R-HSA-5687128;Reactome: R-HSA-4086398;Reactome: R-HSA-1912408;Reactome: R-HSA-8943723;Reactome: R-HSA-9029569 "Oxidative Stress Induced Senescence";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Regulation of RUNX1 Expression and Activity";"TP53 Regulates Metabolic Genes";"Oncogene Induced Senescence";"Post-transcriptional silencing by small RNAs";"Estrogen-dependent gene expression";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"Transcriptional Regulation by MECP2";"Transcriptional Regulation by VENTX";"Regulation of MECP2 expression and activity";"MAPK6/MAPK4 signaling";"Ca2+ pathway";"Pre-NOTCH Transcription and Translation";"Regulation of PTEN mRNA translation";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux" ID=BGER005552-PA|Name=BGER005552-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-6804758 "HATs acetylate histones";"Regulation of TP53 Activity through Acetylation" ID=BGER013123-PA|Name=BGER013123-PA 6 MetaCyc: PWY-6922;MetaCyc: PWY-4981;Reactome: R-HSA-8964539;MetaCyc: PWY-3341;KEGG: 00330+2.6.1.13;MetaCyc: PWY-6344 "L-Ndelta-acetylornithine biosynthesis";"L-proline biosynthesis II (from arginine)";"Glutamate and glutamine metabolism";"L-proline biosynthesis III (from L-ornithine)";"Arginine and proline metabolism";"L-ornithine degradation II (Stickland reaction)" ID=BGER025792-PA|Name=BGER025792-PA 5 Reactome: R-HSA-532668;MetaCyc: PWY-7918;MetaCyc: PWY-7919;KEGG: 00510+3.2.1.106;Reactome: R-HSA-4793954 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Protein N-glycosylation processing phase (yeast)";"Protein N-glycosylation processing phase (plants and animals)";"N-Glycan biosynthesis";"Defective MOGS causes MOGS-CDG (CDG-2b)" ID=BGER015734-PA|Name=BGER015734-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER008734-PA|Name=BGER008734-PA 2 Reactome: R-HSA-8853659;Reactome: R-HSA-5673001 "RET signaling";"RAF/MAP kinase cascade" ID=BGER028379-PA|Name=BGER028379-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER026288-PA|Name=BGER026288-PA 1 Reactome: R-HSA-5624958 "ARL13B-mediated ciliary trafficking of INPP5E" ID=BGER014233-PA|Name=BGER014233-PA 4 Reactome: R-HSA-5625970;Reactome: R-HSA-6811434;Reactome: R-HSA-983189;Reactome: R-HSA-2132295 "RHO GTPases activate KTN1";"COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins";"MHC class II antigen presentation" ID=BGER025648-PA|Name=BGER025648-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER001620-PA|Name=BGER001620-PA 2 MetaCyc: PWY-7560;KEGG: 00900+2.7.7.60 "Methylerythritol phosphate pathway II";"Terpenoid backbone biosynthesis" ID=BGER003651-PA|Name=BGER003651-PA 2 Reactome: R-HSA-70171;Reactome: R-HSA-70263 "Glycolysis";"Gluconeogenesis" ID=BGER004802-PA|Name=BGER004802-PA 2 Reactome: R-HSA-8964539;Reactome: R-HSA-2151201 "Glutamate and glutamine metabolism";"Transcriptional activation of mitochondrial biogenesis" ID=BGER025771-PA|Name=BGER025771-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER028985-PA|Name=BGER028985-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018680-PA|Name=BGER018680-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER023319-PA|Name=BGER023319-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER000466-PA|Name=BGER000466-PA 33 Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-168333;Reactome: R-HSA-2500257;Reactome: R-HSA-180746;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-3301854;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-1169408;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-141444;Reactome: R-HSA-9610379;Reactome: R-HSA-168276;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-5578749;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-4085377;Reactome: R-HSA-159227;Reactome: R-HSA-3371453 "snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery";"Resolution of Sister Chromatid Cohesion";"Nuclear import of Rev protein";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Nuclear Pore Complex (NPC) Disassembly";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"ISG15 antiviral mechanism";"SUMOylation of DNA replication proteins";"HCMV Early Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"HCMV Late Events";"NS1 Mediated Effects on Host Pathways";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"Transcriptional regulation by small RNAs";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of SUMOylation proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response" ID=BGER004346-PA|Name=BGER004346-PA 2 Reactome: R-HSA-1236394;Reactome: R-HSA-977443 "Signaling by ERBB4";"GABA receptor activation" ID=BGER016263-PA|Name=BGER016263-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER011599-PA|Name=BGER011599-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER029927-PA|Name=BGER029927-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER002399-PA|Name=BGER002399-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER021074-PA|Name=BGER021074-PA 29 Reactome: R-HSA-73863;Reactome: R-HSA-5696400;Reactome: R-HSA-77075;Reactome: R-HSA-5696395;Reactome: R-HSA-167158;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167160;Reactome: R-HSA-167162;Reactome: R-HSA-167161;Reactome: R-HSA-167200;Reactome: R-HSA-113418;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-167172;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-674695;Reactome: R-HSA-73762;Reactome: R-HSA-75955;Reactome: R-HSA-427413;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-76042;Reactome: R-HSA-6782135;Reactome: R-HSA-167246 "RNA Polymerase I Transcription Termination";"Dual Incision in GG-NER";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of Incision Complex in GG-NER";"Formation of the HIV-1 Early Elongation Complex";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II HIV Promoter Escape";"HIV Transcription Initiation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of the Early Elongation Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Transcription of the HIV genome";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Elongation";"NoRC negatively regulates rRNA expression";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript" ID=BGER005188-PA|Name=BGER005188-PA 11 Reactome: R-HSA-9013700;Reactome: R-HSA-9013507;Reactome: R-HSA-205043;Reactome: R-HSA-2122948;Reactome: R-HSA-9017802;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-1251985;Reactome: R-HSA-2644606;Reactome: R-HSA-3928665;Reactome: R-HSA-193692 "NOTCH4 Activation and Transmission of Signal to the Nucleus";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"NRIF signals cell death from the nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Noncanonical activation of NOTCH3";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Nuclear signaling by ERBB4";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"EPH-ephrin mediated repulsion of cells";"Regulated proteolysis of p75NTR" ID=BGER013350-PA|Name=BGER013350-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" ID=BGER015786-PA|Name=BGER015786-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-1834949;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-76061 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER017873-PA|Name=BGER017873-PA 57 Reactome: R-HSA-382556;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-69601;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-6798695;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-5658442;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902 "ABC-family proteins mediated transport";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Neutrophil degranulation";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RAS by GAPs";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity" ID=BGER004200-PA|Name=BGER004200-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER027581-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER025221-PA|Name=BGER025221-PA 4 Reactome: R-HSA-8934903;Reactome: R-HSA-5205685;Reactome: R-HSA-936440;Reactome: R-HSA-1632852 "Receptor Mediated Mitophagy";"Pink/Parkin Mediated Mitophagy";"Negative regulators of DDX58/IFIH1 signaling";"Macroautophagy" ID=BGER001788-PA|Name=BGER001788-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER006370-PA|Name=BGER006370-PA 1 Reactome: R-HSA-8854691 "Interleukin-20 family signaling" ID=BGER018051-PA|Name=BGER018051-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER018963-PA|Name=BGER018963-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER028777-PA|Name=BGER028777-PA 1 KEGG: 00970+6.1.1.5 "Aminoacyl-tRNA biosynthesis" ID=BGER013968-PA|Name=BGER013968-PA 1 Reactome: R-HSA-400253 "Circadian Clock" ID=BGER005114-PA|Name=BGER005114-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER002811-PA|Name=BGER002811-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER024505-PA|Name=BGER024505-PA 1 Reactome: R-HSA-2565942 "Regulation of PLK1 Activity at G2/M Transition" ID=BGER027056-PA|Name=BGER027056-PA 1 Reactome: R-HSA-2142789 "Ubiquinol biosynthesis" ID=BGER022782-PA|Name=BGER022782-PA 4 KEGG: 00230+6.3.4.4;MetaCyc: PWY-7219;KEGG: 00250+6.3.4.4;Reactome: R-HSA-73817 "Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis";"Alanine, aspartate and glutamate metabolism";"Purine ribonucleoside monophosphate biosynthesis" ID=BGER022790-PA|Name=BGER022790-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER022268-PA|Name=BGER022268-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER029920-PA|Name=BGER029920-PA 2 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER007511-PA|Name=BGER007511-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER007275-PA|Name=BGER007275-PA 2 Reactome: R-HSA-5357956;Reactome: R-HSA-5357905 "TNFR1-induced NFkappaB signaling pathway";"Regulation of TNFR1 signaling" ID=BGER017548-PA|Name=BGER017548-PA 10 MetaCyc: PWY-7559;MetaCyc: PWY-7112;MetaCyc: PWY-8001;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-4061;MetaCyc: PWY-4041;MetaCyc: PWY-6842;KEGG: 00460+2.3.2.2;KEGG: 00430+2.3.2.2;MetaCyc: PWY-5826 "Glutathione degradation (DUG pathway";"4-hydroxy-2-nonenal detoxification";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione metabolism";"Glutathione-mediated detoxification I";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification II";"Cyanoamino acid metabolism";"Taurine and hypotaurine metabolism";"Hypoglycin biosynthesis" ID=BGER007986-PA|Name=BGER007986-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER013993-PA|Name=BGER013993-PA 33 Reactome: R-HSA-159230;Reactome: R-HSA-2467813;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-2500257;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-1169408;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-3301854;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-5663220;Reactome: R-HSA-168325;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-168271;Reactome: R-HSA-168276;Reactome: R-HSA-141444;Reactome: R-HSA-9610379;Reactome: R-HSA-9648025;Reactome: R-HSA-4085377;Reactome: R-HSA-3371453;Reactome: R-HSA-159227;Reactome: R-HSA-5578749;Reactome: R-HSA-170822;Reactome: R-HSA-68877 "Transport of the SLBP Dependant Mature mRNA";"Separation of Sister Chromatids";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"Resolution of Sister Chromatid Cohesion";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"ISG15 antiviral mechanism";"HCMV Early Events";"SUMOylation of DNA replication proteins";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"RHO GTPases Activate Formins";"Viral Messenger RNA Synthesis";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"Transport of Ribonucleoproteins into the Host Nucleus";"NS1 Mediated Effects on Host Pathways";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"HCMV Late Events";"EML4 and NUDC in mitotic spindle formation";"SUMOylation of SUMOylation proteins";"Regulation of HSF1-mediated heat shock response";"Transport of the SLBP independent Mature mRNA";"Transcriptional regulation by small RNAs";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Mitotic Prometaphase" ID=BGER025696-PA|Name=BGER025696-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER011592-PA|Name=BGER011592-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" ID=BGER023664-PA|Name=BGER023664-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER013507-PA|Name=BGER013507-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018296-PA|Name=BGER018296-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER014157-PA|Name=BGER014157-PA 1 Reactome: R-HSA-209968 "Thyroxine biosynthesis" ID=BGER010400-PA|Name=BGER010400-PA 4 MetaCyc: PWY-6517;Reactome: R-HSA-446210;MetaCyc: PWY-6906;KEGG: 00520+2.7.1.59 "N-acetylglucosamine degradation II";"Synthesis of UDP-N-acetyl-glucosamine";"Chitin derivatives degradation";"Amino sugar and nucleotide sugar metabolism" ID=BGER010489-PA|Name=BGER010489-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER022107-PA|Name=BGER022107-PA 3 Reactome: R-HSA-5620916;Reactome: R-HSA-1445148;Reactome: R-HSA-264876 "VxPx cargo-targeting to cilium";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing" ID=BGER025097-PC|Name=BGER025097-PC 2 Reactome: R-HSA-1660662;Reactome: R-HSA-6798695 "Glycosphingolipid metabolism";"Neutrophil degranulation" ID=BGER016733-PA|Name=BGER016733-PA 16 Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-6791226;Reactome: R-HSA-72702 "Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition" ID=BGER027101-PA|Name=BGER027101-PA 2 Reactome: R-HSA-445095;Reactome: R-HSA-5576892 "Interaction between L1 and Ankyrins";"Phase 0 - rapid depolarisation" ID=BGER016711-PA|Name=BGER016711-PA 1 Reactome: R-HSA-427975 "Proton/oligopeptide cotransporters" ID=BGER014376-PA|Name=BGER014376-PA 7 Reactome: R-HSA-1362277;Reactome: R-HSA-1362300;Reactome: R-HSA-69656;Reactome: R-HSA-69205;Reactome: R-HSA-69202;Reactome: R-HSA-1538133;Reactome: R-HSA-156711 "Transcription of E2F targets under negative control by DREAM complex";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Cyclin A:Cdk2-associated events at S phase entry";"G1/S-Specific Transcription";"Cyclin E associated events during G1/S transition";"G0 and Early G1";"Polo-like kinase mediated events" ID=BGER027353-PA|Name=BGER027353-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER019497-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER023574-PA|Name=BGER023574-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER007373-PA|Name=BGER007373-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER022579-PA|Name=BGER022579-PA 26 Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-5626467;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-2500257;Reactome: R-HSA-8955332;Reactome: R-HSA-389960;Reactome: R-HSA-9648025;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-389977 "Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"RHO GTPases activate IQGAPs";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Resolution of Sister Chromatid Cohesion";"Carboxyterminal post-translational modifications of tubulin";"Formation of tubulin folding intermediates by CCT/TriC";"EML4 and NUDC in mitotic spindle formation";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"COPI-mediated anterograde transport";"HCMV Early Events";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Post-chaperonin tubulin folding pathway" ID=BGER002731-PA|Name=BGER002731-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695;Reactome: R-HSA-3299685;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6 "Glyoxylate and dicarboxylate metabolism";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation";"Detoxification of Reactive Oxygen Species";"Peroxisomal protein import";"Tryptophan metabolism" ID=BGER001672-PA|Name=BGER001672-PA 5 Reactome: R-HSA-6782135;Reactome: R-HSA-6781827;Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210 "Dual incision in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER" ID=BGER027493-PA|Name=BGER027493-PA 7 Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-4615885;Reactome: R-HSA-68877;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"SUMOylation of DNA replication proteins";"Mitotic Prometaphase";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER007604-PA|Name=BGER007604-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" ID=BGER018854-PA|Name=BGER018854-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER010905-PA|Name=BGER010905-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER007147-PA|Name=BGER007147-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER004578-PA|Name=BGER004578-PA 3 MetaCyc: PWY-5491;KEGG: 00790+3.1.3.1;KEGG: 00730+3.1.3.1 "Diethylphosphate degradation";"Folate biosynthesis";"Thiamine metabolism" ID=BGER008946-PA|Name=BGER008946-PA 4 Reactome: R-HSA-68884;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-6811434 "Mitotic Telophase/Cytokinesis";"Kinesins";"MHC class II antigen presentation";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER007136-PA|Name=BGER007136-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-6798695 "Glycosphingolipid metabolism";"Neutrophil degranulation" ID=BGER029038-PA|Name=BGER029038-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-68949;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Switching of origins to a post-replicative state";"Orc1 removal from chromatin";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" ID=BGER014312-PA|Name=BGER014312-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER011678-PA|Name=BGER011678-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER001725-PA|Name=BGER001725-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER000026-PA|Name=BGER000026-PA 2 MetaCyc: PWY-6829;Reactome: R-HSA-6782315 "Trna methylation (yeast)";"tRNA modification in the nucleus and cytosol" ID=BGER014325-PA|Name=BGER014325-PA 10 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-3214847;Reactome: R-HSA-201722;KEGG: 04151+2.7.11.1;Reactome: R-HSA-5689880;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"HATs acetylate histones";"Formation of the beta-catenin:TCF transactivating complex";"PI3K-Akt signaling pathway";"Ub-specific processing proteases";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER020543-PA|Name=BGER020543-PA 29 Reactome: R-HSA-5696395;Reactome: R-HSA-6783310;Reactome: R-HSA-5696400;Reactome: R-HSA-5693607;Reactome: R-HSA-3108214;Reactome: R-HSA-68962;Reactome: R-HSA-5358606;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5693616;Reactome: R-HSA-5656121;Reactome: R-HSA-5685938;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-5656169;Reactome: R-HSA-69166;Reactome: R-HSA-174437;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-3371453;Reactome: R-HSA-5696397;Reactome: R-HSA-912446;Reactome: R-HSA-5358565;Reactome: R-HSA-110312;Reactome: R-HSA-6782135;Reactome: R-HSA-3371511;Reactome: R-HSA-5651801;Reactome: R-HSA-5655862 "Formation of Incision Complex in GG-NER";"Fanconi Anemia Pathway";"Dual Incision in GG-NER";"Processing of DNA double-strand break ends";"SUMOylation of DNA damage response and repair proteins";"Activation of the pre-replicative complex";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Presynaptic phase of homologous DNA pairing and strand exchange";"Translesion synthesis by POLI";"HDR through Single Strand Annealing (SSA)";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"Termination of translesion DNA synthesis";"Removal of the Flap Intermediate";"Removal of the Flap Intermediate from the C-strand";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Regulation of HSF1-mediated heat shock response";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Meiotic recombination";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Translesion synthesis by REV1";"Dual incision in TC-NER";"HSF1 activation";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK" ID=BGER008625-PA|Name=BGER008625-PA 6 MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-7782;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax esters biosynthesis I";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER028284-PA|Name=BGER028284-PA 14 KEGG: 00260+2.1.2.1;KEGG: 00680+2.1.2.1;KEGG: 00670+2.1.2.1;MetaCyc: PWY-3661-1;MetaCyc: PWY-2161;MetaCyc: PWY-3841;Reactome: R-HSA-196757;MetaCyc: PWY-5497;MetaCyc: PWY-3661;MetaCyc: PWY-1622;MetaCyc: PWY-181;KEGG: 00630+2.1.2.1;KEGG: 00460+2.1.2.1;MetaCyc: PWY-2201 "Glycine, serine and threonine metabolism";"Methane metabolism";"One carbon pool by folate";"Glycine betaine degradation II (mammalian)";"Folate polyglutamylation";"Folate transformations II (plants)";"Metabolism of folate and pterines";"Purine nucleobases degradation II (anaerobic)";"Glycine betaine degradation I";"Formaldehyde assimilation I (serine pathway)";"Photorespiration ";"Glyoxylate and dicarboxylate metabolism";"Cyanoamino acid metabolism";"Folate transformations I" ID=BGER027489-PA|Name=BGER027489-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-9639288 "Insulin receptor recycling";"ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Ion channel transport";"Amino acids regulate mTORC1" ID=BGER006465-PA|Name=BGER006465-PA 2 KEGG: 00620+3.6.1.7;KEGG: 00627+3.6.1.7 "Pyruvate metabolism";"Aminobenzoate degradation" ID=BGER000479-PA|Name=BGER000479-PA 7 MetaCyc: PWY-5921;KEGG: 00471+3.5.1.2;Reactome: R-HSA-210500;KEGG: 00250+3.5.1.2;Reactome: R-HSA-8964539;Reactome: R-HSA-5628897;KEGG: 00220+3.5.1.2 "Glutaminyl-trnagln biosynthesis via transamidation";"D-Glutamine and D-glutamate metabolism";"Glutamate Neurotransmitter Release Cycle";"Alanine, aspartate and glutamate metabolism";"Glutamate and glutamine metabolism";"TP53 Regulates Metabolic Genes";"Arginine biosynthesis" ID=BGER023203-PA|Name=BGER023203-PA 1 Reactome: R-HSA-379726 "Mitochondrial tRNA aminoacylation" ID=BGER012569-PA|Name=BGER012569-PA 10 Reactome: R-HSA-5607761;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-5684264;Reactome: R-HSA-2565942;Reactome: R-HSA-2871837;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-202424 "Dectin-1 mediated noncanonical NF-kB signaling";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"Regulation of PLK1 Activity at G2/M Transition";"FCERI mediated NF-kB activation";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling" ID=BGER026383-PA|Name=BGER026383-PA 4 KEGG: 00790+4.6.1.17;MetaCyc: PWY-6823;Reactome: R-HSA-947581;KEGG: 00790+4.1.99.22 "Folate biosynthesis";"Molybdenum cofactor biosynthesis";"Molybdenum cofactor biosynthesis";"Folate biosynthesis" ID=BGER027875-PA|Name=BGER027875-PA 1 Reactome: R-HSA-427975 "Proton/oligopeptide cotransporters" ID=BGER022265-PA|Name=BGER022265-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER016460-PA|Name=BGER016460-PA 1 Reactome: R-HSA-390651 "Dopamine receptors" ID=BGER024232-PA|Name=BGER024232-PA 8 MetaCyc: PWY-7193;Reactome: R-HSA-6798695;MetaCyc: PWY-6556;KEGG: 00240+3.5.4.5;Reactome: R-HSA-73614;MetaCyc: PWY-7199;MetaCyc: PWY-7181;KEGG: 00983+3.5.4.5 "Pyrimidine ribonucleosides salvage I";"Neutrophil degranulation";"Pyrimidine ribonucleosides salvage II";"Pyrimidine metabolism";"Pyrimidine salvage";"Pyrimidine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleosides degradation";"Drug metabolism - other enzymes" ID=BGER019389-PA|Name=BGER019389-PA 2 KEGG: 00561+2.7.1.30;MetaCyc: PWY-4261 "Glycerolipid metabolism";"Glycerol degradation I" ID=BGER008229-PA|Name=BGER008229-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER008832-PA|Name=BGER008832-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER021654-PA|Name=BGER021654-PA 1 Reactome: R-HSA-70921 "Histidine catabolism" ID=BGER012191-PA|Name=BGER012191-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER028322-PA|Name=BGER028322-PA 18 KEGG: 00710+2.6.1.1;KEGG: 00350+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00270+2.6.1.1;MetaCyc: PWY-7117;KEGG: 00330+2.6.1.1;MetaCyc: PWY-5913;MetaCyc: PWY-7383;KEGG: 00950+2.6.1.1;KEGG: 00220+2.6.1.1;MetaCyc: PWY-6642;KEGG: 00360+2.6.1.1;KEGG: 00401+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00400+2.6.1.1;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00960+2.6.1.1 "Carbon fixation in photosynthetic organisms";"Tyrosine metabolism";"Coenzyme M biosynthesis II";"Cysteine and methionine metabolism";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Arginine and proline metabolism";"Partial TCA cycle (obligate autotrophs)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Isoquinoline alkaloid biosynthesis";"Arginine biosynthesis";"(R)-cysteate degradation";"Phenylalanine metabolism";"Novobiocin biosynthesis";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Tropane, piperidine and pyridine alkaloid biosynthesis" ID=BGER025660-PA|Name=BGER025660-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-197264;KEGG: 00760+6.3.4.21;MetaCyc: PWY-5381;Reactome: R-HSA-1368108 "Neutrophil degranulation";"Nicotinamide salvaging";"Nicotinate and nicotinamide metabolism";"Pyridine nucleotide cycling (plants)";"BMAL1:CLOCK,NPAS2 activates circadian gene expression" ID=BGER003279-PA|Name=BGER003279-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-72689 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Formation of a pool of free 40S subunits" ID=BGER022237-PA|Name=BGER022237-PA 9 MetaCyc: PWY-6118;MetaCyc: PWY-7411;KEGG: 00564+1.1.1.8;MetaCyc: PWY-7902;Reactome: R-HSA-1483166;MetaCyc: PWY-7385;KEGG: 00564+1.1.1.94;MetaCyc: PWY-5667;MetaCyc: PWY-5981 "Glycerol-3-phosphate shuttle";"Phosphatidate biosynthesis (yeast)";"Glycerophospholipid metabolism";"Glucosylglycerol biosynthesis";"Synthesis of PA";"1,3-propanediol biosynthesis (engineered)";"Glycerophospholipid metabolism";"CDP-diacylglycerol biosynthesis I";"CDP-diacylglycerol biosynthesis III" ID=BGER008657-PA|Name=BGER006524-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER016078-PA|Name=BGER016078-PA 24 Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-5626467;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878 "Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"RHO GTPases activate IQGAPs";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport" ID=BGER002476-PA|Name=BGER002476-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER005607-PA|Name=BGER005607-PA 6 Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025 "Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation" ID=BGER004174-PA|Name=BGER004174-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER006248-PA|Name=BGER006248-PA 14 MetaCyc: PWY-1622;KEGG: 00680+4.2.1.11;MetaCyc: PWY-2221;MetaCyc: PWY-5484;MetaCyc: PWY-7003;MetaCyc: PWY-6142;MetaCyc: PWY-1042;MetaCyc: PWY-6901;MetaCyc: PWY-7124;MetaCyc: PWY-7218;MetaCyc: PWY-8004;KEGG: 00010+4.2.1.11;MetaCyc: PWY-6886;MetaCyc: PWY-5723 "Formaldehyde assimilation I (serine pathway)";"Methane metabolism";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Glycolysis II (from fructose 6-phosphate)";"Glycerol degradation to butanol";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycolysis IV (plant cytosol)";"Superpathway of glucose and xylose degradation";"Ethylene biosynthesis V (engineered)";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Entner-Doudoroff pathway I";"Glycolysis / Gluconeogenesis";"1-butanol autotrophic biosynthesis (engineered)";"Rubisco shunt" ID=BGER022236-PA|Name=BGER022236-PA 19 MetaCyc: PWY-735;MetaCyc: PWY-7007;MetaCyc: PWY-7291;MetaCyc: PWY-6837;KEGG: 00071+1.3.3.6;MetaCyc: PWY-7288;MetaCyc: PWY-7574;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7338;MetaCyc: PWY-6920;KEGG: 00592+1.3.3.6;MetaCyc: PWY-7606;MetaCyc: PWY-7726;KEGG: 00410+1.3.3.6;MetaCyc: PWY-5136;MetaCyc: PWY-7858;MetaCyc: PWY-7337;MetaCyc: PWY-7340;MetaCyc: PWY-7854 "Jasmonic acid biosynthesis";"Methyl ketone biosynthesis (engineered)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"Fatty acid degradation";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Propanoyl-coa degradation II";"Propanoate metabolism";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"6-gingerol analog biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"beta-Alanine metabolism";"Fatty acid beta-oxidation II (plant peroxisome)";"(5Z)-dodecenoate biosynthesis II";"10-cis-heptadecenoyl-CoA degradation (yeast)";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)" ID=BGER005858-PA|Name=BGER005858-PA 14 Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-5972;MetaCyc: PWY-7724 "Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)" ID=BGER022139-PA|Name=BGER022139-PA 9 KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;KEGG: 00531+3.2.1.52;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00513+3.2.1.52;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822 "Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Various types of N-glycan biosynthesis";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)" ID=BGER018059-PA|Name=BGER018059-PA 13 KEGG: 00500+3.6.1.9;KEGG: 00770+3.6.1.9;MetaCyc: PWY-7184;KEGG: 00230+3.6.1.66;MetaCyc: PWY-6545;KEGG: 00240+3.6.1.9;MetaCyc: PWY-7821;MetaCyc: PWY-7206;KEGG: 00760+3.6.1.9;KEGG: 00740+3.6.1.9;MetaCyc: PWY-7187;KEGG: 00230+3.6.1.9;Reactome: R-HSA-74259 "Starch and sucrose metabolism";"Pantothenate and CoA biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Purine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine metabolism";"Tunicamycin biosynthesis";"Pyrimidine deoxyribonucleotides dephosphorylation";"Nicotinate and nicotinamide metabolism";"Riboflavin metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Purine metabolism";"Purine catabolism" ID=BGER026919-PA|Name=BGER026919-PA 5 Reactome: R-HSA-163765;Reactome: R-HSA-2426168;Reactome: R-HSA-199220;Reactome: R-HSA-9029558;Reactome: R-HSA-75105 "ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)";"Vitamin B5 (pantothenate) metabolism";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis" ID=BGER017771-PA|Name=BGER017771-PA 7 MetaCyc: PWY-7818;Reactome: R-HSA-1483191;MetaCyc: PWY-3385;MetaCyc: PWY-7782;MetaCyc: PWY-7886;KEGG: 00564+2.7.1.32+2.7.1.82;Reactome: R-HSA-1483213 "Type IV lipoteichoic acid biosynthesis (S. pneumoniae)";"Synthesis of PC";"Choline biosynthesis I";"Plasmalogen biosynthesis";"Cell-surface glycoconjugate-linked phosphocholine biosynthesis";"Glycerophospholipid metabolism";"Synthesis of PE" ID=BGER010745-PA|Name=BGER010745-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER001001-PA|Name=BGER001001-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER016667-PA|Name=BGER016667-PA 7 Reactome: R-HSA-8854518;Reactome: R-HSA-380270;Reactome: R-HSA-380320;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380284;Reactome: R-HSA-380259 "AURKA Activation by TPX2";"Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Loss of proteins required for interphase microtubule organization from the centrosome";"Loss of Nlp from mitotic centrosomes" ID=BGER023086-PA|Name=BGER023086-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" ID=BGER005538-PA|Name=BGER005538-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER004591-PA|Name=BGER004591-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-418594 "Peptide ligand-binding receptors";"G alpha (i) signalling events" ID=BGER020083-PA|Name=BGER020083-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER025934-PA|Name=BGER025934-PA 27 Reactome: R-HSA-3301854;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-159236;Reactome: R-HSA-170822;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-168276;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-168271;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531 "Nuclear Pore Complex (NPC) Disassembly";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"NS1 Mediated Effects on Host Pathways";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus" ID=BGER029935-PA|Name=BGER029935-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER012188-PA|Name=BGER012188-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER000872-PA|Name=BGER000872-PA 2 KEGG: 00561+2.3.1.20;KEGG: 00073+2.3.1.20 "Glycerolipid metabolism";"Cutin, suberine and wax biosynthesis" ID=BGER023643-PA|Name=BGER023643-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER004998-PA|Name=BGER004998-PA 1 Reactome: R-HSA-416476 "G alpha (q) signalling events" ID=BGER025255-PA|Name=BGER025255-PA 11 Reactome: R-HSA-5685938;KEGG: 04660+2.7.10.2;Reactome: R-HSA-5693565;Reactome: R-HSA-8939236;Reactome: R-HSA-2029482;Reactome: R-HSA-69231;Reactome: R-HSA-8940973;Reactome: R-HSA-983231;Reactome: R-HSA-428890;Reactome: R-HSA-525793;Reactome: R-HSA-5663213 "HDR through Single Strand Annealing (SSA)";"T cell receptor signaling pathway";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of actin dynamics for phagocytic cup formation";"Cyclin D associated events in G1";"RUNX2 regulates osteoblast differentiation";"Factors involved in megakaryocyte development and platelet production";"Role of ABL in ROBO-SLIT signaling";"Myogenesis";"RHO GTPases Activate WASPs and WAVEs" ID=BGER011764-PA|Name=BGER011764-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER012374-PA|Name=BGER012374-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER023615-PA|Name=BGER023615-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-901032 "Protein ubiquitination";"ER Quality Control Compartment (ERQC)" ID=BGER012977-PA|Name=BGER012977-PA 2 Reactome: R-HSA-390918;Reactome: R-HSA-9033241 "Peroxisomal lipid metabolism";"Peroxisomal protein import" ID=BGER026052-PA|Name=BGER026052-PA 17 Reactome: R-HSA-5693548;Reactome: R-HSA-5693554;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-3270619;Reactome: R-HSA-5693607;Reactome: R-HSA-5693579;Reactome: R-HSA-5693571;Reactome: R-HSA-1834949;Reactome: R-HSA-5693565;Reactome: R-HSA-912446;Reactome: R-HSA-5685939;Reactome: R-HSA-2559586;Reactome: R-HSA-69473;Reactome: R-HSA-6804756 "Sensing of DNA Double Strand Breaks";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"IRF3-mediated induction of type I IFN";"Processing of DNA double-strand break ends";"Homologous DNA Pairing and Strand Exchange";"Nonhomologous End-Joining (NHEJ)";"Cytosolic sensors of pathogen-associated DNA";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Meiotic recombination";"HDR through MMEJ (alt-NHEJ)";"DNA Damage/Telomere Stress Induced Senescence";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation" ID=BGER006485-PA|Name=BGER006485-PA 5 MetaCyc: PWY-6829;Reactome: R-HSA-2132295;Reactome: R-HSA-3371497;Reactome: R-HSA-6807878;Reactome: R-HSA-6811436 "Trna methylation (yeast)";"MHC class II antigen presentation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-mediated anterograde transport";"COPI-independent Golgi-to-ER retrograde traffic" ID=BGER016071-PA|Name=BGER016071-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" ID=BGER006712-PA|Name=BGER006712-PA 5 Reactome: R-HSA-1834949;Reactome: R-HSA-3270619;Reactome: R-HSA-6798695;Reactome: R-HSA-164843;Reactome: R-HSA-5693571 "Cytosolic sensors of pathogen-associated DNA";"IRF3-mediated induction of type I IFN";"Neutrophil degranulation";"2-LTR circle formation";"Nonhomologous End-Joining (NHEJ)" ID=BGER001159-PA|Name=BGER001159-PA 2 Reactome: R-HSA-3108214;MetaCyc: PWY-7511 "SUMOylation of DNA damage response and repair proteins";"Protein ubiquitination" ID=BGER022108-PA|Name=BGER022108-PA 2 Reactome: R-HSA-8875656;Reactome: R-HSA-8873719 "MET receptor recycling";"RAB geranylgeranylation" ID=BGER002725-PA|Name=BGER002725-PA 4 Reactome: R-HSA-8856828;Reactome: R-HSA-3928662;Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "Clathrin-mediated endocytosis";"EPHB-mediated forward signaling";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER005835-PA|Name=BGER005835-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER024224-PA|Name=BGER024224-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER021638-PA|Name=BGER021638-PA 14 MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7619;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725 "(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Juniperonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)" ID=BGER024308-PA|Name=BGER024308-PA 7 KEGG: 00650+4.1.3.4;Reactome: R-HSA-9033241;Reactome: R-HSA-77111;KEGG: 00281+4.1.3.4;KEGG: 00280+4.1.3.4;MetaCyc: PWY-5074;KEGG: 00072+4.1.3.4 "Butanoate metabolism";"Peroxisomal protein import";"Synthesis of Ketone Bodies";"Geraniol degradation";"Valine, leucine and isoleucine degradation";"Mevalonate degradation";"Synthesis and degradation of ketone bodies" ID=BGER001237-PA|Name=BGER001237-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER005849-PA|Name=BGER005849-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER026598-PA|Name=BGER026598-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER003487-PA|Name=BGER003487-PA 2 Reactome: R-HSA-6783984;KEGG: 00260+1.4.4.2 "Glycine degradation";"Glycine, serine and threonine metabolism" ID=BGER020544-PA|Name=BGER020544-PA 1 Reactome: R-HSA-140342 "Apoptosis induced DNA fragmentation" ID=BGER001149-PA|Name=BGER001149-PA 3 KEGG: 04660+2.7.10.2;Reactome: R-HSA-4420097;Reactome: R-HSA-391160 "T cell receptor signaling pathway";"VEGFA-VEGFR2 Pathway";"Signal regulatory protein family interactions" ID=BGER005781-PA|Name=BGER005781-PA 7 Reactome: R-HSA-1655829;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-203927;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-6784531 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"MicroRNA (miRNA) biogenesis";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"tRNA processing in the nucleus" ID=BGER001238-PA|Name=BGER001238-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER024467-PA|Name=BGER024467-PA 12 Reactome: R-HSA-71240;MetaCyc: PWY-6842;MetaCyc: PWY-1187;MetaCyc: PWY-801;MetaCyc: PWY-2821;MetaCyc: PWY-601;KEGG: 00450+4.4.1.13;KEGG: 00270+4.4.1.13;KEGG: 00380+2.6.1.7;MetaCyc: PWY-7901;MetaCyc: PWY-6309;MetaCyc: PWY-6936 "Tryptophan catabolism";"Glutathione-mediated detoxification II";"Glucosinolate biosynthesis from homomethionine";"Homocysteine and cysteine interconversion";"Glucosinolate biosynthesis from phenylalanine";"Glucosinolate biosynthesis from tryptophan";"Selenocompound metabolism";"Cysteine and methionine metabolism";"Tryptophan metabolism";"Glucosinolate biosynthesis from tyrosine";"L-tryptophan degradation XI (mammalian, via kynurenine)";"Seleno-amino acid biosynthesis (plants)" ID=BGER007759-PA|Name=BGER007759-PA 1 Reactome: R-HSA-71336 "Pentose phosphate pathway" ID=BGER003954-PA|Name=BGER003954-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" ID=BGER024029-PA|Name=BGER024029-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER025271-PA|Name=BGER025271-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" ID=BGER011077-PA|Name=BGER011077-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" ID=BGER022483-PA|Name=BGER022483-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER003888-PA|Name=BGER003888-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-9633012 "Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER017546-PA|Name=BGER017546-PA 10 MetaCyc: PWY-4061;MetaCyc: PWY-4041;MetaCyc: PWY-6842;KEGG: 00460+2.3.2.2;KEGG: 00430+2.3.2.2;MetaCyc: PWY-5826;MetaCyc: PWY-7559;MetaCyc: PWY-7112;MetaCyc: PWY-8001;KEGG: 00480+2.3.2.2+3.4.19.13 "Glutathione-mediated detoxification I";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification II";"Cyanoamino acid metabolism";"Taurine and hypotaurine metabolism";"Hypoglycin biosynthesis";"Glutathione degradation (DUG pathway";"4-hydroxy-2-nonenal detoxification";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione metabolism" ID=BGER004024-PA|Name=BGER004024-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" ID=BGER013650-PA|Name=BGER013650-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER006874-PA|Name=BGER006874-PA 52 Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-1834949;Reactome: R-HSA-76061;Reactome: R-HSA-112382;Reactome: R-HSA-73780;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-76071;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-203927;Reactome: R-HSA-73762;Reactome: R-HSA-8851708;Reactome: R-HSA-73779;Reactome: R-HSA-749476;Reactome: R-HSA-73776;Reactome: R-HSA-6781823;Reactome: R-HSA-73980;Reactome: R-HSA-6782210;Reactome: R-HSA-113418;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-72165;Reactome: R-HSA-5250924;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-5578749;Reactome: R-HSA-427413;Reactome: R-HSA-5601884;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-167172;Reactome: R-HSA-76066;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-167161;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-73772;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-72163;Reactome: R-HSA-168325;Reactome: R-HSA-73863 "Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Formation of RNA Pol II elongation complex";"RNA Polymerase III Chain Elongation";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"MicroRNA (miRNA) biogenesis";"RNA Polymerase I Transcription Initiation";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase II Promoter Escape";"Formation of TC-NER Pre-Incision Complex";"RNA Polymerase III Transcription Termination";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of the Early Elongation Complex";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Transcriptional regulation by small RNAs";"NoRC negatively regulates rRNA expression";"PIWI-interacting RNA (piRNA) biogenesis";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"Transcription of the HIV genome";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"HIV Transcription Initiation";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"RNA Polymerase I Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"mRNA Splicing - Major Pathway";"Viral Messenger RNA Synthesis";"RNA Polymerase I Transcription Termination" ID=BGER029159-PA|Name=BGER029159-PA 1 Reactome: R-HSA-196836 "Vitamin C (ascorbate) metabolism" ID=BGER011871-PA|Name=BGER011871-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER010840-PA|Name=BGER010840-PA 6 KEGG: 00900+4.1.1.33;MetaCyc: PWY-7391;Reactome: R-HSA-446199;Reactome: R-HSA-191273;MetaCyc: PWY-922;Reactome: R-HSA-2426168 "Terpenoid backbone biosynthesis";"Isoprene biosynthesis II (engineered)";"Synthesis of Dolichyl-phosphate";"Cholesterol biosynthesis";"Mevalonate pathway I";"Activation of gene expression by SREBF (SREBP)" ID=BGER004557-PA|Name=BGER004557-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER000822-PA|Name=BGER000822-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER023978-PA|Name=BGER023978-PA 1 Reactome: R-HSA-1971475 "A tetrasaccharide linker sequence is required for GAG synthesis" ID=BGER013022-PA|Name=BGER013022-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER000420-PA|Name=BGER000420-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER019391-PA|Name=BGER019391-PA 20 MetaCyc: PWY-7606;MetaCyc: PWY-6920;KEGG: 00592+1.3.3.6;MetaCyc: PWY-7338;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7574;MetaCyc: PWY-7288;KEGG: 00071+1.3.3.6;MetaCyc: PWY-6837;MetaCyc: PWY-7291;MetaCyc: PWY-7007;MetaCyc: PWY-735;MetaCyc: PWY-7854;MetaCyc: PWY-7340;MetaCyc: PWY-7337;MetaCyc: PWY-7858;MetaCyc: PWY-5136;Reactome: R-HSA-9033241;KEGG: 00410+1.3.3.6;MetaCyc: PWY-7726 "Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"6-gingerol analog biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"Propanoate metabolism";"Propanoyl-coa degradation II";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Fatty acid degradation";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Methyl ketone biosynthesis (engineered)";"Jasmonic acid biosynthesis";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"10-cis-heptadecenoyl-CoA degradation (yeast)";"(5Z)-dodecenoate biosynthesis II";"Fatty acid beta-oxidation II (plant peroxisome)";"Peroxisomal protein import";"beta-Alanine metabolism";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)" ID=BGER015091-PA|Name=BGER015091-PA 2 Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER017676-PA|Name=BGER017676-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER015868-PA|Name=BGER015868-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER016861-PA|Name=BGER016861-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER005153-PA|Name=BGER005153-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER005779-PA|Name=BGER005779-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" ID=BGER019629-PA|Name=BGER019629-PA 9 Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-167161;Reactome: R-HSA-674695;Reactome: R-HSA-6804756 "Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"HIV Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"Regulation of TP53 Activity through Phosphorylation" ID=BGER015645-PA|Name=BGER015645-PA 3 Reactome: R-HSA-6804760;Reactome: R-HSA-3214858;Reactome: R-HSA-191859 "Regulation of TP53 Activity through Methylation";"RMTs methylate histone arginines";"snRNP Assembly" ID=BGER005074-PA|Name=BGER005074-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER025929-PA|Name=BGER025929-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER014827-PA|Name=BGER014827-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER028085-PA|Name=BGER028085-PA 4 KEGG: 00562+1.13.99.1;Reactome: R-HSA-1855183;KEGG: 00053+1.13.99.1;MetaCyc: PWY-4841 "Inositol phosphate metabolism";"Synthesis of IP2, IP, and Ins in the cytosol";"Ascorbate and aldarate metabolism";"UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)" ID=BGER000478-PA|Name=Cathepsin 4 Reactome: R-HSA-2132295;Reactome: R-HSA-5694530;Reactome: R-HSA-204005;Reactome: R-HSA-6798695 "MHC class II antigen presentation";"Cargo concentration in the ER";"COPII-mediated vesicle transport";"Neutrophil degranulation" ID=BGER020237-PA|Name=BGER020237-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER018567-PA|Name=BGER018567-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER023524-PA|Name=BGER023524-PA 5 Reactome: R-HSA-2871796;KEGG: 04150+2.7.11.24;Reactome: R-HSA-2559580;Reactome: R-HSA-450341;Reactome: R-HSA-450321 "FCERI mediated MAPK activation";"mTOR signaling pathway";"Oxidative Stress Induced Senescence";"Activation of the AP-1 family of transcription factors";"JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1" ID=BGER003062-PB|Name=BGER003062-PB 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER015050-PA|Name=BGER015050-PA 27 Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-3301854;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-170822;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-168271;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-168276;Reactome: R-HSA-168333;Reactome: R-HSA-180746 "ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"Nuclear Pore Complex (NPC) Disassembly";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"NS1 Mediated Effects on Host Pathways";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein" ID=BGER020490-PA|Name=BGER020490-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER008132-PA|Name=BGER008132-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER005959-PA|Name=BGER005959-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" ID=BGER026931-PA|Name=BGER026931-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" ID=BGER004942-PA|Name=BGER004942-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER021154-PA|Name=BGER021154-PA 13 KEGG: 00720+4.2.1.2;MetaCyc: PWY-5690;MetaCyc: PWY-7384;MetaCyc: PWY-6728;MetaCyc: PWY-5913;KEGG: 00620+4.2.1.2;MetaCyc: PWY-561;MetaCyc: PWY-5392;MetaCyc: PWY-8086;KEGG: 00020+4.2.1.2;MetaCyc: PWY-6969;MetaCyc: PWY-7254;Reactome: R-HSA-71403 "Carbon fixation pathways in prokaryotes";"TCA cycle II (plants and fungi)";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)";"Pyruvate metabolism";"Superpathway of glyoxylate cycle and fatty acid degradation";"Reductive TCA cycle II";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Citrate cycle (TCA cycle)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"TCA cycle VII (acetate-producers)";"Citric acid cycle (TCA cycle)" ID=BGER004307-PA|Name=eye 1 Reactome: R-HSA-5693565 "Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" ID=BGER002377-PA|Name=BGER002377-PA 4 Reactome: R-HSA-3656532;Reactome: R-HSA-2173788;Reactome: R-HSA-2173789;Reactome: R-HSA-3304356 "TGFBR1 KD Mutants in Cancer";"Downregulation of TGF-beta receptor signaling";"TGF-beta receptor signaling activates SMADs";"SMAD2/3 Phosphorylation Motif Mutants in Cancer" ID=BGER014830-PA|Name=BGER014830-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-8951664;Reactome: R-HSA-6781823;Reactome: R-HSA-8856825 "DNA Damage Recognition in GG-NER";"Neddylation";"Formation of TC-NER Pre-Incision Complex";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER008547-PA|Name=BGER008547-PA 1 Reactome: R-HSA-5657655 "MGMT-mediated DNA damage reversal" ID=BGER021096-PA|Name=BGER021096-PA 17 MetaCyc: PWY-561;KEGG: 00720+1.1.1.37;KEGG: 00620+1.1.1.37;MetaCyc: PWY-5392;MetaCyc: PWY-6969;MetaCyc: PWY-1622;MetaCyc: PWY-5690;MetaCyc: PWY-7115;KEGG: 00710+1.1.1.37;MetaCyc: PWY-8086;KEGG: 00680+1.1.1.37;KEGG: 00270+1.1.1.37;KEGG: 00630+1.1.1.37;KEGG: 00020+1.1.1.37;MetaCyc: PWY-7383;MetaCyc: PWY-5913;MetaCyc: PWY-6728 "Superpathway of glyoxylate cycle and fatty acid degradation";"Carbon fixation pathways in prokaryotes";"Pyruvate metabolism";"Reductive TCA cycle II";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Formaldehyde assimilation I (serine pathway)";"TCA cycle II (plants and fungi)";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Carbon fixation in photosynthetic organisms";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Methane metabolism";"Cysteine and methionine metabolism";"Glyoxylate and dicarboxylate metabolism";"Citrate cycle (TCA cycle)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle" ID=BGER009884-PA|Name=BGER009884-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER013476-PA|Name=BGER013476-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER029133-PA|Name=BGER029133-PA 1 Reactome: R-HSA-977347 "Serine biosynthesis" ID=BGER018412-PA|Name=BGER018412-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER011537-PA|Name=BGER011537-PA 4 KEGG: 00513+2.4.1.260;Reactome: R-HSA-446193;KEGG: 00510+2.4.1.260;Reactome: R-HSA-4720489 "Various types of N-glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"N-Glycan biosynthesis";"Defective ALG12 causes ALG12-CDG (CDG-1g)" ID=BGER021374-PA|Name=BGER021374-PA 16 Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-174184;Reactome: R-HSA-69017;Reactome: R-HSA-176412;Reactome: R-HSA-983168;Reactome: R-HSA-141430;Reactome: R-HSA-174084;Reactome: R-HSA-174048;Reactome: R-HSA-8853884;Reactome: R-HSA-176408;Reactome: R-HSA-2559582;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-174178;Reactome: R-HSA-179409 "Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"CDK-mediated phosphorylation and removal of Cdc6";"Phosphorylation of the APC/C";"Antigen processing: Ubiquitination & Proteasome degradation";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Cyclin B";"Transcriptional Regulation by VENTX";"Regulation of APC/C activators between G1/S and early anaphase";"Senescence-Associated Secretory Phenotype (SASP)";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A" ID=BGER016265-PA|Name=BGER016265-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER027892-PA|Name=BGER027892-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER005358-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER013911-PA|Name=BGER013911-PA 4 MetaCyc: PWY-5686;MetaCyc: PWY-7791;MetaCyc: PWY-7790;KEGG: 00240+3.5.2.3 "UMP biosynthesis I";"UMP biosynthesis III";"UMP biosynthesis II";"Pyrimidine metabolism" ID=BGER006694-PA|Name=BGER006694-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-194840;Reactome: R-HSA-416482 "NRAGE signals death through JNK";"Rho GTPase cycle";"G alpha (12/13) signalling events" ID=BGER017940-PA|Name=BGER017940-PA 2 Reactome: R-HSA-5689603;Reactome: R-HSA-5696394 "UCH proteinases";"DNA Damage Recognition in GG-NER" ID=BGER018028-PA|Name=BGER018028-PA 5 Reactome: R-HSA-6807878;Reactome: R-HSA-6811436;Reactome: R-HSA-6798695;Reactome: R-HSA-3371497;Reactome: R-HSA-2132295 "COPI-mediated anterograde transport";"COPI-independent Golgi-to-ER retrograde traffic";"Neutrophil degranulation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"MHC class II antigen presentation" ID=BGER005161-PA|Name=BGER005161-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER001698-PA|Name=BGER001698-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" ID=BGER020123-PA|Name=BGER020123-PA 3 Reactome: R-HSA-5576893;Reactome: R-HSA-1296072;Reactome: R-HSA-5576890 "Phase 2 - plateau phase";"Voltage gated Potassium channels";"Phase 3 - rapid repolarisation" ID=BGER028199-PA|Name=BGER028199-PA 6 Reactome: R-HSA-72163;Reactome: R-HSA-111367;Reactome: R-HSA-191859;Reactome: R-HSA-77588;Reactome: R-HSA-72165;Reactome: R-HSA-73856 "mRNA Splicing - Major Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"snRNP Assembly";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"mRNA Splicing - Minor Pathway";"RNA Polymerase II Transcription Termination" ID=BGER007096-PA|Name=BGER007096-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER000803-PA|Name=BGER000803-PA 1 KEGG: 00051+4.2.1.68 "Fructose and mannose metabolism" ID=BGER022810-PA|Name=BGER022810-PA 16 Reactome: R-HSA-174084;Reactome: R-HSA-174048;Reactome: R-HSA-983168;Reactome: R-HSA-141430;Reactome: R-HSA-176412;Reactome: R-HSA-69017;Reactome: R-HSA-174184;Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-2467813;Reactome: R-HSA-179409;Reactome: R-HSA-174178;Reactome: R-HSA-2559582;Reactome: R-HSA-176409;Reactome: R-HSA-176408;Reactome: R-HSA-8853884 "Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Cyclin B";"Antigen processing: Ubiquitination & Proteasome degradation";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Phosphorylation of the APC/C";"CDK-mediated phosphorylation and removal of Cdc6";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Separation of Sister Chromatids";"APC-Cdc20 mediated degradation of Nek2A";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Senescence-Associated Secretory Phenotype (SASP)";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Regulation of APC/C activators between G1/S and early anaphase";"Transcriptional Regulation by VENTX" ID=BGER012876-PA|Name=BGER012876-PA 2 Reactome: R-HSA-168276;Reactome: R-HSA-1169408 "NS1 Mediated Effects on Host Pathways";"ISG15 antiviral mechanism" ID=BGER003109-PA|Name=BGER003109-PA 10 MetaCyc: PWY-5826;KEGG: 00430+2.3.2.2;KEGG: 00460+2.3.2.2;MetaCyc: PWY-6842;MetaCyc: PWY-4041;MetaCyc: PWY-4061;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-7112;MetaCyc: PWY-7559;MetaCyc: PWY-8001 "Hypoglycin biosynthesis";"Taurine and hypotaurine metabolism";"Cyanoamino acid metabolism";"Glutathione-mediated detoxification II";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification I";"Glutathione metabolism";"4-hydroxy-2-nonenal detoxification";"Glutathione degradation (DUG pathway";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis" ID=BGER007093-PA|Name=BGER007093-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" ID=BGER001298-PA|Name=BGER001298-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER011909-PA|Name=BGER011909-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing" ID=BGER001157-PA|Name=BGER001157-PA 1 Reactome: R-HSA-74217 "Purine salvage" ID=BGER027507-PA|Name=BGER027507-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER003467-PA|Name=BGER003467-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER001354-PA|Name=BGER001354-PA 5 KEGG: 00970+6.1.1.14;Reactome: R-HSA-379716;Reactome: R-HSA-6804756;Reactome: R-HSA-8854518;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation";"Regulation of TP53 Activity through Phosphorylation";"AURKA Activation by TPX2";"Mitochondrial tRNA aminoacylation" ID=BGER028911-PA|Name=BGER028911-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012901-PA|Name=BGER012901-PA 5 MetaCyc: PWY-7279;KEGG: 00190+7.1.1.8;MetaCyc: PWY-7082;MetaCyc: PWY-6692;MetaCyc: PWY-3781 "Aerobic respiration II (cytochrome c) (yeast)";"Oxidative phosphorylation";"Ammonia oxidation IV (autotrophic ammonia oxidizers)";"Fe(II) oxidation";"Aerobic respiration I (cytochrome c)" ID=BGER000597-PA|Name=BGER000597-PA 6 KEGG: 00053+1.1.1.22;KEGG: 00520+1.1.1.22;MetaCyc: PWY-7346;KEGG: 00040+1.1.1.22;Reactome: R-HSA-173599;MetaCyc: PWY-7820 "Ascorbate and aldarate metabolism";"Amino sugar and nucleotide sugar metabolism";"UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)";"Pentose and glucuronate interconversions";"Formation of the active cofactor, UDP-glucuronate";"Teichuronic acid biosynthesis (B. subtilis 168)" ID=BGER008836-PA|Name=BGER008836-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER007525-PA|Name=BGER007525-PA 2 Reactome: R-HSA-72706;Reactome: R-HSA-72702 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition" ID=BGER001824-PA|Name=BGER001824-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" ID=BGER003196-PA|Name=BGER003196-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER020362-PA|Name=BGER020362-PA 1 Reactome: R-HSA-8873719 "RAB geranylgeranylation" ID=BGER009621-PA|Name=BGER009621-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER011171-PA|Name=BGER011171-PA 2 Reactome: R-HSA-6807505;Reactome: R-HSA-191859 "RNA polymerase II transcribes snRNA genes";"snRNP Assembly" ID=BGER019041-PA|Name=BGER019041-PA 2 Reactome: R-HSA-2160916;Reactome: R-HSA-8854518 "Hyaluronan uptake and degradation";"AURKA Activation by TPX2" ID=BGER020810-PA|Name=BGER020810-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER025194-PA|Name=BGER025194-PA 1 Reactome: R-HSA-5663220 "RHO GTPases Activate Formins" ID=BGER007991-PA|Name=BGER007991-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947 "Notch-HLH transcription pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription" ID=BGER026628-PA|Name=BGER026628-PA 3 MetaCyc: PWY-1801;KEGG: 00680+3.1.2.12;Reactome: R-HSA-156590 "Formaldehyde oxidation II (glutathione-dependent)";"Methane metabolism";"Glutathione conjugation" ID=BGER011662-PA|Name=BGER011662-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER006372-PA|Name=BGER006372-PA 1 Reactome: R-HSA-5635838 "Activation of SMO" ID=BGER021838-PA|Name=BGER021838-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER006355-PA|Name=BGER006355-PA 3 MetaCyc: PWY-7856;KEGG: 00860+2.5.1.141;Reactome: R-HSA-189451 "Heme a biosynthesis";"Porphyrin and chlorophyll metabolism";"Heme biosynthesis" ID=BGER028718-PA|Name=BGER028718-PA 3 KEGG: 00270+5.3.1.23;MetaCyc: PWY-4361;MetaCyc: PWY-7174 "Cysteine and methionine metabolism";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II" ID=BGER003388-PA|Name=BGER003388-PA 10 Reactome: R-HSA-674695;Reactome: R-HSA-9018519;Reactome: R-HSA-167161;Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-73779;Reactome: R-HSA-6807505;Reactome: R-HSA-73776 "RNA Polymerase II Pre-transcription Events";"Estrogen-dependent gene expression";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Promoter Escape" ID=BGER000912-PA|Name=BGER000912-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER025904-PA|Name=BGER025904-PA 4 Reactome: R-HSA-3371453;Reactome: R-HSA-8950505;Reactome: R-HSA-8949613;Reactome: R-HSA-1268020 "Regulation of HSF1-mediated heat shock response";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Cristae formation";"Mitochondrial protein import" ID=BGER019901-PA|Name=BGER019901-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" ID=BGER015046-PA|Name=BGER015046-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER003789-PA|Name=BGER003789-PA 2 Reactome: R-HSA-168276;Reactome: R-HSA-1169408 "NS1 Mediated Effects on Host Pathways";"ISG15 antiviral mechanism" ID=BGER010354-PA|Name=BGER010354-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862 "Notch-HLH transcription pathway";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants" ID=BGER013404-PA|Name=BGER013404-PA 4 KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943;KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219 "Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis" ID=BGER020209-PA|Name=BGER020209-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER000943-PA|Name=BGER000943-PA 2 Reactome: R-HSA-6784531;Reactome: R-HSA-6791226 "tRNA processing in the nucleus";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER028666-PA|Name=BGER028666-PA 1 Reactome: R-HSA-5663220 "RHO GTPases Activate Formins" ID=BGER013569-PA|Name=BGER013569-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER016999-PA|Name=BGER016999-PA 6 Reactome: R-HSA-9615017;Reactome: R-HSA-6798695;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6;KEGG: 00630+1.11.1.6 "FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Tryptophan metabolism";"Glyoxylate and dicarboxylate metabolism" ID=BGER016438-PA|Name=BGER016438-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER016260-PA|Name=BGER016260-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER022953-PA|Name=BGER022953-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER005672-PA|Name=BGER005672-PA 2 Reactome: R-HSA-162710;KEGG: 00563+3.5.1.89 "Synthesis of glycosylphosphatidylinositol (GPI)";"Glycosylphosphatidylinositol (GPI)-anchor biosynthesis" ID=BGER012942-PA|Name=BGER012942-PA 3 MetaCyc: PWY-7533;Reactome: R-HSA-2142691;Reactome: R-HSA-5423646 "Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Aflatoxin activation and detoxification" ID=BGER013278-PA|Name=BGER013278-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER025772-PB|Name=BGER025772-PB 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER026731-PA|Name=BGER026731-PA 9 MetaCyc: PWY-5744;MetaCyc: PWY-241;MetaCyc: PWY-5743;MetaCyc: PWY-6142;Reactome: R-HSA-1475029;MetaCyc: PWY-7117;MetaCyc: PWY-5789;KEGG: 00910+4.2.1.1;MetaCyc: PWY-7115 "Glyoxylate assimilation";"C4 photosynthetic carbon assimilation cycle, NADP-ME type";"3-hydroxypropanoate cycle";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Reversible hydration of carbon dioxide";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Nitrogen metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type" ID=BGER020491-PA|Name=BGER020491-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-1834949;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-76061 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER022459-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER028598-PA|Name=BGER028598-PA 1 Reactome: R-HSA-112308 "Presynaptic depolarization and calcium channel opening" ID=BGER008847-PA|Name=BGER008847-PA 1 KEGG: 00970+6.1.1.19 "Aminoacyl-tRNA biosynthesis" ID=BGER000600-PA|Name=BGER000600-PA 1 Reactome: R-HSA-2299718 "Condensation of Prophase Chromosomes" ID=BGER026254-PA|Name=BGER026254-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023925-PA|Name=BGER023925-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER028296-PA|Name=BGER028296-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" ID=BGER019852-PA|Name=BGER019852-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER018086-PA|Name=BGER018086-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER009998-PA|Name=BGER009998-PA 4 MetaCyc: PWY-7219;KEGG: 00230+2.7.4.3;KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943 "Adenosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates" ID=BGER024778-PA|Name=BGER024778-PA 1 Reactome: R-HSA-169911 "Regulation of Apoptosis" ID=BGER024670-PA|Name=BGER024670-PA 13 KEGG: 00020+6.2.1.5;MetaCyc: PWY-5913;MetaCyc: PWY-6728;KEGG: 00660+6.2.1.5;MetaCyc: PWY-7384;MetaCyc: PWY-5690;MetaCyc: PWY-6969;KEGG: 00640+6.2.1.5;MetaCyc: PWY-5392;MetaCyc: PWY-5538;Reactome: R-HSA-71403;MetaCyc: PWY-5537;KEGG: 00720+6.2.1.5 "Citrate cycle (TCA cycle)";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle";"C5-Branched dibasic acid metabolism";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"TCA cycle II (plants and fungi)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Propanoate metabolism";"Reductive TCA cycle II";"Pyruvate fermentation to acetate VI";"Citric acid cycle (TCA cycle)";"Pyruvate fermentation to acetate V";"Carbon fixation pathways in prokaryotes" ID=BGER018052-PA|Name=BGER018052-PA 10 MetaCyc: PWY-1042;KEGG: 00052+2.7.1.11;MetaCyc: PWY-7385;Reactome: R-HSA-70171;MetaCyc: PWY-1861;KEGG: 00030+2.7.1.11;KEGG: 00010+2.7.1.11;KEGG: 00051+2.7.1.11;KEGG: 00680+2.7.1.11;MetaCyc: PWY-5484 "Glycolysis IV (plant cytosol)";"Galactose metabolism";"1,3-propanediol biosynthesis (engineered)";"Glycolysis";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Pentose phosphate pathway";"Glycolysis / Gluconeogenesis";"Fructose and mannose metabolism";"Methane metabolism";"Glycolysis II (from fructose 6-phosphate)" ID=BGER011615-PA|Name=BGER011615-PA 2 Reactome: R-HSA-390522;Reactome: R-HSA-445355 "Striated Muscle Contraction";"Smooth Muscle Contraction" ID=BGER007435-PA|Name=BGER007435-PA 13 MetaCyc: PWY-7226;KEGG: 00240+1.17.4.1;MetaCyc: PWY-7198;MetaCyc: PWY-7220;KEGG: 00480+1.17.4.1;MetaCyc: PWY-7210;MetaCyc: PWY-6545;KEGG: 00983+1.17.4.1;MetaCyc: PWY-7222;Reactome: R-HSA-499943;MetaCyc: PWY-7184;MetaCyc: PWY-7227;KEGG: 00230+1.17.4.1 "Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Glutathione metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Drug metabolism - other enzymes";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis";"Purine metabolism" ID=BGER007228-PA|Name=BGER007228-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER028361-PA|Name=BGER028361-PA 3 Reactome: R-HSA-450513;Reactome: R-HSA-450385;Reactome: R-HSA-430039 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 5' to 3' exoribonuclease" ID=BGER019198-PA|Name=BGER019198-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER012819-PA|Name=BGER012819-PA 2 Reactome: R-HSA-5205685;Reactome: R-HSA-1268020 "Pink/Parkin Mediated Mitophagy";"Mitochondrial protein import" ID=BGER011405-PA|Name=BGER011405-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862 "Notch-HLH transcription pathway";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants" ID=BGER020608-PA|Name=BGER020608-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER029614-PA|Name=BGER029614-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER026713-PA|Name=BGER026713-PA 9 Reactome: R-HSA-110330;Reactome: R-HSA-5649702;Reactome: R-HSA-110357;Reactome: R-HSA-9656256;Reactome: R-HSA-110328;Reactome: R-HSA-110331;Reactome: R-HSA-110329;Reactome: R-HSA-9657050;Reactome: R-HSA-9656255 "Recognition and association of DNA glycosylase with site containing an affected purine";"APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway";"Displacement of DNA glycosylase by APEX1";"Defective OGG1 Substrate Processing";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Cleavage of the damaged purine";"Cleavage of the damaged pyrimidine";"Defective OGG1 Localization";"Defective OGG1 Substrate Binding" ID=BGER023207-PA|Name=BGER023207-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" ID=BGER003045-PA|Name=BGER003045-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER008892-PA|Name=BGER008892-PA 6 Reactome: R-HSA-163765;Reactome: R-HSA-2426168;Reactome: R-HSA-199220;Reactome: R-HSA-9029558;Reactome: R-HSA-75105;Reactome: R-HSA-9640463 "ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)";"Vitamin B5 (pantothenate) metabolism";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis";"Wax biosynthesis" ID=BGER023342-PA|Name=BGER023342-PA 6 KEGG: 04658+3.1.3.16;Reactome: R-HSA-2173788;KEGG: 05235+3.1.3.16;Reactome: R-HSA-163560;KEGG: 04660+3.1.3.16;Reactome: R-HSA-400253 "Th1 and Th2 cell differentiation";"Downregulation of TGF-beta receptor signaling";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Triglyceride catabolism";"T cell receptor signaling pathway";"Circadian Clock" ID=BGER003660-PA|Name=BGER003660-PA 2 Reactome: R-HSA-2142753;KEGG: 00970+6.3.5.7 "Arachidonic acid metabolism";"Aminoacyl-tRNA biosynthesis" ID=BGER000096-PA|Name=BGER000096-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER000877-PA|Name=BGER000877-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER006522-PA|Name=BGER006522-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER013024-PA|Name=BGER013024-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER028953-PA|Name=BGER028953-PA 15 Reactome: R-HSA-8986944;Reactome: R-HSA-8943723;Reactome: R-HSA-9029569;Reactome: R-HSA-9018519;Reactome: R-HSA-4086398;Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-9022692;Reactome: R-HSA-2559585;Reactome: R-HSA-5687128;Reactome: R-HSA-2559580;Reactome: R-HSA-8853884;Reactome: R-HSA-8936459;Reactome: R-HSA-8934593 "Transcriptional Regulation by MECP2";"Regulation of PTEN mRNA translation";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Estrogen-dependent gene expression";"Ca2+ pathway";"Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"Regulation of MECP2 expression and activity";"Oncogene Induced Senescence";"MAPK6/MAPK4 signaling";"Oxidative Stress Induced Senescence";"Transcriptional Regulation by VENTX";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Regulation of RUNX1 Expression and Activity" ID=BGER011993-PA|Name=BGER011993-PA 8 Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68616;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68689 "Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"Assembly of the ORC complex at the origin of replication";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"CDC6 association with the ORC:origin complex" ID=BGER000325-PA|Name=BGER000325-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER000477-PA|Name=BGER000477-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER026283-PA|Name=BGER026283-PA 2 Reactome: R-HSA-8866654;Reactome: R-HSA-9033241 "E3 ubiquitin ligases ubiquitinate target proteins";"Peroxisomal protein import" ID=BGER005365-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER011707-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER024801-PA|Name=BGER024801-PA 2 KEGG: 00561+2.7.1.30;MetaCyc: PWY-4261 "Glycerolipid metabolism";"Glycerol degradation I" ID=BGER013176-PA|Name=BGER013176-PA 1 Reactome: R-HSA-1237044 "Erythrocytes take up carbon dioxide and release oxygen" ID=BGER017870-PA|Name=BGER017870-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER026442-PA|Name=BGER026442-PA 6 Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-72695;Reactome: R-HSA-156827 "Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER000150-PA|Name=BGER000150-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER000925-PA|Name=BGER000925-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER005954-PA|Name=BGER005954-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER006357-PA|Name=BGER006357-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER003230-PA|Name=BGER003230-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER014708-PA|Name=BGER014708-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-264876;Reactome: R-HSA-5620916 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing";"VxPx cargo-targeting to cilium" ID=BGER001445-PA|Name=BGER001445-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER016428-PA|Name=BGER016428-PA 6 MetaCyc: PWY-7817;KEGG: 04070+2.7.1.107;Reactome: R-HSA-114508;MetaCyc: PWY-7039;KEGG: 00561+2.7.1.107;KEGG: 00564+2.7.1.107 "Type I lipoteichoic acid biosynthesis (S. aureus)";"Phosphatidylinositol signaling system";"Effects of PIP2 hydrolysis";"Phosphatidate metabolism, as a signaling molecule";"Glycerolipid metabolism";"Glycerophospholipid metabolism" ID=BGER012547-PA|Name=BGER012547-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER020030-PA|Name=BGER020030-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER015843-PA|Name=BGER015843-PA 57 Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-5607761;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5610783;Reactome: R-HSA-532668;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-187577;Reactome: R-HSA-195253;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-382556 "Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI2 by the proteasome";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Separation of Sister Chromatids";"Degradation of AXIN";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"Ub-specific processing proteases";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport" ID=BGER007586-PA|Name=BGER007586-PA 2 MetaCyc: PWY-6019;KEGG: 00240+4.2.1.70 "Pseudouridine degradation";"Pyrimidine metabolism" ID=BGER010949-PA|Name=BGER010949-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER023992-PA|Name=BGER023992-PA 10 KEGG: 00010+2.7.2.3;Reactome: R-HSA-70263;MetaCyc: PWY-7003;MetaCyc: PWY-5484;MetaCyc: PWY-1042;MetaCyc: PWY-6901;Reactome: R-HSA-70171;KEGG: 00710+2.7.2.3;MetaCyc: PWY-8004;MetaCyc: PWY-6886 "Glycolysis / Gluconeogenesis";"Gluconeogenesis";"Glycerol degradation to butanol";"Glycolysis II (from fructose 6-phosphate)";"Glycolysis IV (plant cytosol)";"Superpathway of glucose and xylose degradation";"Glycolysis";"Carbon fixation in photosynthetic organisms";"Entner-Doudoroff pathway I";"1-butanol autotrophic biosynthesis (engineered)" ID=BGER024509-PA|Name=BGER024509-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER019261-PA|Name=BGER019261-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER024978-PA|Name=BGER024978-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" ID=BGER012933-PA|Name=BGER012933-PA 4 Reactome: R-HSA-2468052;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-2470946 "Establishment of Sister Chromatid Cohesion";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"Cohesin Loading onto Chromatin" ID=BGER019628-PA|Name=BGER019628-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER008364-PA|Name=BGER008364-PA 2 KEGG: 00511+3.2.1.24;Reactome: R-HSA-8853383 "Other glycan degradation";"Lysosomal oligosaccharide catabolism" ID=BGER007483-PA|Name=BGER007483-PA 2 Reactome: R-HSA-5578775;Reactome: R-HSA-2672351 "Ion homeostasis";"Stimuli-sensing channels" ID=BGER010360-PA|Name=BGER010360-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER013492-PA|Name=BGER013492-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER014010-PA|Name=BGER014010-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER015253-PA|Name=BGER015253-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER008195-PA|Name=BGER008195-PA 16 Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER010628-PA|Name=BGER010628-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-8949664 "Mitochondrial calcium ion transport";"Processing of SMDT1" ID=BGER018461-PA|Name=BGER018461-PA 2 KEGG: 00230+3.6.1.3;Reactome: R-HSA-8866910 "Purine metabolism";"TFAP2 (AP-2) family regulates transcription of growth factors and their receptors" ID=BGER011702-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012399-PA|Name=BGER012399-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" ID=BGER004979-PA|Name=BGER004979-PA 3 Reactome: R-HSA-913709;Reactome: R-HSA-2022854;Reactome: R-HSA-975577 "O-linked glycosylation of mucins";"Keratan sulfate biosynthesis";"N-Glycan antennae elongation" ID=BGER022116-PA|Name=BGER022116-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER025515-PA|Name=BGER025515-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER011155-PA|Name=BGER011155-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER020704-PA|Name=BGER020704-PA 3 Reactome: R-HSA-416476;Reactome: R-HSA-418594;Reactome: R-HSA-375276 "G alpha (q) signalling events";"G alpha (i) signalling events";"Peptide ligand-binding receptors" ID=BGER017836-PA|Name=BGER017836-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER007368-PA|Name=BGER007368-PA 12 Reactome: R-HSA-73762;Reactome: R-HSA-2644606;Reactome: R-HSA-9013695;Reactome: R-HSA-2894862;Reactome: R-HSA-350054;Reactome: R-HSA-210744;Reactome: R-HSA-1912408;Reactome: R-HSA-2122947;Reactome: R-HSA-3214847;Reactome: R-HSA-5250924;Reactome: R-HSA-9013508;Reactome: R-HSA-8941856 "RNA Polymerase I Transcription Initiation";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH4 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Notch-HLH transcription pathway";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Pre-NOTCH Transcription and Translation";"NOTCH1 Intracellular Domain Regulates Transcription";"HATs acetylate histones";"B-WICH complex positively regulates rRNA expression";"NOTCH3 Intracellular Domain Regulates Transcription";"RUNX3 regulates NOTCH signaling" ID=BGER024649-PA|Name=BGER024649-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER016714-PA|Name=BGER016714-PA 2 Reactome: R-HSA-6796648;Reactome: R-HSA-6783310 "TP53 Regulates Transcription of DNA Repair Genes";"Fanconi Anemia Pathway" ID=BGER015887-PA|Name=BGER015887-PA 8 MetaCyc: PWY-7817;Reactome: R-HSA-1483148;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16;KEGG: 00564+3.1.3.27;MetaCyc: PWY-5269;MetaCyc: PWY-5668 "Type I lipoteichoic acid biosynthesis (S. aureus)";"Synthesis of PG";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation";"Glycerophospholipid metabolism";"Cardiolipin biosynthesis II";"Cardiolipin biosynthesis I" ID=BGER022707-PA|Name=BGER022707-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" ID=BGER019995-PA|Name=BGER019995-PA 1 Reactome: R-HSA-1971475 "A tetrasaccharide linker sequence is required for GAG synthesis" ID=BGER009470-PA|Name=BGER009470-PA 2 Reactome: R-HSA-189085;KEGG: 00500+3.2.1.28 "Digestion of dietary carbohydrate";"Starch and sucrose metabolism" ID=BGER011316-PA|Name=BGER011316-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER004988-PA|Name=BGER004988-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER005860-PA|Name=BGER005860-PA 14 MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-6433;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7601 "Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Hydroxylated fatty acid biosynthesis (plants)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" ID=BGER028645-PA|Name=BGER028645-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER023214-PA|Name=BGER023214-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" ID=BGER005069-PA|Name=BGER005069-PA 5 Reactome: R-HSA-9615710;Reactome: R-HSA-162588;Reactome: R-HSA-174490;Reactome: R-HSA-9610379;Reactome: R-HSA-917729 "Late endosomal microautophagy";"Budding and maturation of HIV virion";"Membrane binding and targetting of GAG proteins";"HCMV Late Events";"Endosomal Sorting Complex Required For Transport (ESCRT)" ID=BGER023966-PA|Name=BGER023966-PA 7 Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862;Reactome: R-HSA-2660826;Reactome: R-HSA-2691232;Reactome: R-HSA-2979096;Reactome: R-HSA-2122948 "NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus" ID=BGER017124-PA|Name=BGER017124-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER000566-PA|Name=BGER000566-PA 27 Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-168276;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-170822;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-159236;Reactome: R-HSA-3301854;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408 "Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"NS1 Mediated Effects on Host Pathways";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear Pore Complex (NPC) Disassembly";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism" ID=BGER010456-PA|Name=BGER010456-PA 5 Reactome: R-HSA-5250924;Reactome: R-HSA-427413;Reactome: R-HSA-73772;Reactome: R-HSA-73762;Reactome: R-HSA-73863 "B-WICH complex positively regulates rRNA expression";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Initiation";"RNA Polymerase I Transcription Termination" ID=BGER028053-PA|Name=BGER028053-PA 7 KEGG: 00521+3.1.3.25;MetaCyc: PWY-4702;MetaCyc: PWY-6363;Reactome: R-HSA-1855183;KEGG: 00562+3.1.3.25;KEGG: 04070+3.1.3.25;MetaCyc: PWY-2301 "Streptomycin biosynthesis";"Phytate degradation I";"D-myo-inositol (1,4,5)-trisphosphate degradation";"Synthesis of IP2, IP, and Ins in the cytosol";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Myo-inositol biosynthesis" ID=BGER001748-PA|Name=BGER001748-PA 6 Reactome: R-HSA-6803211;Reactome: R-HSA-139915;Reactome: R-HSA-6803205;Reactome: R-HSA-6803207;Reactome: R-HSA-6803204;Reactome: R-HSA-6804759 "TP53 Regulates Transcription of Death Receptors and Ligands";"Activation of PUMA and translocation to mitochondria";"TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain";"TP53 Regulates Transcription of Caspase Activators and Caspases";"TP53 Regulates Transcription of Genes Involved in Cytochrome C Release";"Regulation of TP53 Activity through Association with Co-factors" ID=BGER014876-PA|Name=BGER014876-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER006396-PA|Name=BGER006396-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER025990-PA|Name=BGER025990-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER011089-PA|Name=BGER011089-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-381340;Reactome: R-HSA-212436 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation";"Generic Transcription Pathway" ID=BGER024465-PA|Name=BGER024465-PA 7 Reactome: R-HSA-6798695;MetaCyc: PWY-6596;Reactome: R-HSA-73817;KEGG: 00983+1.1.1.205;KEGG: 00230+1.1.1.205;MetaCyc: PWY-5695;MetaCyc: PWY-7221 "Neutrophil degranulation";"Adenosine nucleotides degradation I";"Purine ribonucleoside monophosphate biosynthesis";"Drug metabolism - other enzymes";"Purine metabolism";"Inosine 5'-phosphate degradation";"Guanosine ribonucleotides de novo biosynthesis" ID=BGER019487-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER017998-PA|Name=BGER017998-PA 12 Reactome: R-HSA-9013507;Reactome: R-HSA-977225;Reactome: R-HSA-9013700;Reactome: R-HSA-193692;Reactome: R-HSA-3928665;Reactome: R-HSA-2894862;Reactome: R-HSA-1251985;Reactome: R-HSA-2644606;Reactome: R-HSA-2122948;Reactome: R-HSA-2979096;Reactome: R-HSA-9017802;Reactome: R-HSA-205043 "NOTCH3 Activation and Transmission of Signal to the Nucleus";"Amyloid fiber formation";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Regulated proteolysis of p75NTR";"EPH-ephrin mediated repulsion of cells";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Nuclear signaling by ERBB4";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Noncanonical activation of NOTCH3";"NRIF signals cell death from the nucleus" ID=BGER025125-PA|Name=BGER025125-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER017661-PA|Name=BGER017661-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER027580-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER003497-PA|Name=BGER003497-PA 6 Reactome: R-HSA-9615017;Reactome: R-HSA-6798695;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6;KEGG: 00630+1.11.1.6 "FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Tryptophan metabolism";"Glyoxylate and dicarboxylate metabolism" ID=BGER022401-PA|Name=BGER022401-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018467-PA|Name=BGER018467-PA 13 Reactome: R-HSA-2160916;Reactome: R-HSA-2022857;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;Reactome: R-HSA-2024101;KEGG: 00531+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;KEGG: 00513+3.2.1.52;MetaCyc: PWY-6902;Reactome: R-HSA-1660662;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822 "Hyaluronan uptake and degradation";"Keratan sulfate degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"CS/DS degradation";"Glycosaminoglycan degradation";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Various types of N-glycan biosynthesis";"Chitin degradation II (Vibrio)";"Glycosphingolipid metabolism";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)" ID=BGER000357-PA|Name=BGER000357-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER017674-PA|Name=BGER017674-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER015023-PA|Name=BGER015023-PA 3 MetaCyc: PWY-7892;MetaCyc: PWY-7887;Reactome: R-HSA-6787450 "Trna-uridine 2-thiolation and selenation (bacteria)";"Protein SAMPylation and SAMP-mediated thiolation";"tRNA modification in the mitochondrion" ID=BGER013479-PA|Name=BGER013479-PA 1 Reactome: R-HSA-6802952 "Signaling by BRAF and RAF fusions" ID=BGER028830-PA|Name=BGER028830-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection" ID=BGER015617-PA|Name=BGER015617-PA 18 Reactome: R-HSA-1482839;KEGG: 00591+3.1.1.4;Reactome: R-HSA-1482788;KEGG: 00590+3.1.1.4;MetaCyc: PWY-8051;Reactome: R-HSA-1482801;MetaCyc: PWY-8053;MetaCyc: PWY-7416;Reactome: R-HSA-1482922;Reactome: R-HSA-1483166;Reactome: R-HSA-1482925;MetaCyc: PWY-7783;MetaCyc: PWY-7409;KEGG: 00565+3.1.1.4;KEGG: 00592+3.1.1.4;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;MetaCyc: PWY-7417 "Acyl chain remodelling of PE";"Linoleic acid metabolism";"Acyl chain remodelling of PC";"Arachidonic acid metabolism";"Anandamide biosynthesis I";"Acyl chain remodelling of PS";"Anandamide biosynthesis II";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Acyl chain remodelling of PI";"Synthesis of PA";"Acyl chain remodelling of PG";"Plasmalogen degradation";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Ether lipid metabolism";"alpha-Linolenic acid metabolism";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)" ID=BGER003506-PA|Name=BGER003506-PA 6 Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017;KEGG: 00630+1.11.1.6 "Detoxification of Reactive Oxygen Species";"Tryptophan metabolism";"Peroxisomal protein import";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Glyoxylate and dicarboxylate metabolism" ID=BGER020423-PA|Name=BGER020423-PA 9 Reactome: R-HSA-198323;Reactome: R-HSA-5674400;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1 "AKT phosphorylates targets in the cytosol";"Constitutive Signaling by AKT1 E17K in Cancer";"Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway" ID=BGER022039-PA|Name=BGER022039-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER027858-PA|Name=BGER027858-PA 6 KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23;KEGG: 00600+3.2.1.23;KEGG: 00511+3.2.1.23;KEGG: 00052+3.2.1.23;MetaCyc: PWY-6807 "Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Sphingolipid metabolism";"Other glycan degradation";"Galactose metabolism";"Xyloglucan degradation II (exoglucanase)" ID=BGER010036-PA|Name=BGER010036-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" ID=BGER018345-PA|Name=BGER018345-PA 2 Reactome: R-HSA-69273;Reactome: R-HSA-8862803 "Cyclin A/B1/B2 associated events during G2/M transition";"Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models" ID=BGER016497-PA|Name=BGER016497-PA 6 MetaCyc: PWY-5484;KEGG: 00010+5.4.2.11;MetaCyc: PWY-8004;KEGG: 00680+5.4.2.11;KEGG: 00260+5.4.2.11;MetaCyc: PWY-1622 "Glycolysis II (from fructose 6-phosphate)";"Glycolysis / Gluconeogenesis";"Entner-Doudoroff pathway I";"Methane metabolism";"Glycine, serine and threonine metabolism";"Formaldehyde assimilation I (serine pathway)" ID=BGER015071-PA|Name=BGER015071-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER021195-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER001422-PA|Name=BGER001422-PA 3 Reactome: R-HSA-446193;Reactome: R-HSA-5250924;Reactome: R-HSA-4570571 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"B-WICH complex positively regulates rRNA expression";"Defective RFT1 causes RFT1-CDG (CDG-1n)" ID=BGER016039-PA|Name=BGER016039-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER022503-PA|Name=BGER022503-PA 3 MetaCyc: PWY-2161B;Reactome: R-HSA-6798695;KEGG: 00790+3.4.19.9 "Glutamate removal from folates";"Neutrophil degranulation";"Folate biosynthesis" ID=BGER004648-PA|Name=BGER004648-PA 2 Reactome: R-HSA-5689603;Reactome: R-HSA-5696394 "UCH proteinases";"DNA Damage Recognition in GG-NER" ID=BGER011631-PA|Name=Cathepsin 5 Reactome: R-HSA-1442490;Reactome: R-HSA-6798695;Reactome: R-HSA-2132295;Reactome: R-HSA-1679131;Reactome: R-HSA-2022090 "Collagen degradation";"Neutrophil degranulation";"MHC class II antigen presentation";"Trafficking and processing of endosomal TLR";"Assembly of collagen fibrils and other multimeric structures" ID=BGER001358-PA|Name=BGER001358-PA 6 Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" ID=BGER017247-PA|Name=BGER017247-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" ID=BGER001781-PA|Name=BGER001781-PA 5 Reactome: R-HSA-5675221;Reactome: R-HSA-6802946;Reactome: R-HSA-9649948;Reactome: R-HSA-5673000;Reactome: R-HSA-6802955 "Negative regulation of MAPK pathway";"Signaling by moderate kinase activity BRAF mutants";"Signaling downstream of RAS mutants";"RAF activation";"Paradoxical activation of RAF signaling by kinase inactive BRAF" ID=BGER011424-PA|Name=BGER011424-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER027582-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER016549-PA|Name=BGER016549-PA 27 Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-168276;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-168271;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-3301854;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-170822;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690 "snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"NS1 Mediated Effects on Host Pathways";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"Nuclear Pore Complex (NPC) Disassembly";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events" ID=BGER015560-PA|Name=BGER015560-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-163282 "Transcriptional activation of mitochondrial biogenesis";"Mitochondrial transcription initiation" ID=BGER006491-PA|Name=BGER006491-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER020513-PA|Name=BGER020513-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER018848-PA|Name=BGER018848-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER018308-PA|Name=BGER018308-PA 2 Reactome: R-HSA-4641265;Reactome: R-HSA-5339700 "Repression of WNT target genes";"TCF7L2 mutants don't bind CTBP" ID=BGER012314-PA|Name=BGER012314-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" ID=BGER012780-PA|Name=BGER012780-PA 2 Reactome: R-HSA-6782315;MetaCyc: PWY-6829 "tRNA modification in the nucleus and cytosol";"Trna methylation (yeast)" ID=BGER013868-PA|Name=BGER013868-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER017620-PA|Name=BGER017620-PA 3 KEGG: 00330+1.14.11.2;MetaCyc: PWY-7894;Reactome: R-HSA-1650814 "Arginine and proline metabolism";"Procollagen hydroxylation and glycosylation";"Collagen biosynthesis and modifying enzymes" ID=BGER026757-PA|Name=BGER026757-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER019640-PA|Name=BGER019640-PA 1 Reactome: R-HSA-5687128 "MAPK6/MAPK4 signaling" ID=BGER025886-PA|Name=BGER025886-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER010712-PA|Name=BGER010712-PA 3 Reactome: R-HSA-936837;Reactome: R-HSA-5578775;Reactome: R-HSA-418359 "Ion transport by P-type ATPases";"Ion homeostasis";"Reduction of cytosolic Ca++ levels" ID=BGER010640-PA|Name=BGER010640-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-5576893 "Phase 0 - rapid depolarisation";"Phase 2 - plateau phase" ID=BGER026626-PA|Name=BGER026626-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER007146-PA|Name=BGER007146-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-7782 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis" ID=BGER029725-PA|Name=BGER029725-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER025177-PA|Name=BGER025177-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER027588-PA|Name=BGER027588-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER023897-PA|Name=BGER023897-PA 1 KEGG: 00565+3.1.1.47 "Ether lipid metabolism" ID=BGER008393-PA|Name=BGER008393-PA 2 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines" ID=BGER010841-PA|Name=BGER010841-PA 8 KEGG: 00524+2.7.1.1;KEGG: 00520+2.7.1.1;KEGG: 00521+2.7.1.1;KEGG: 00052+2.7.1.1;KEGG: 00051+2.7.1.1;Reactome: R-HSA-70171;KEGG: 00010+2.7.1.1;KEGG: 00500+2.7.1.1 "Neomycin, kanamycin and gentamicin biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Streptomycin biosynthesis";"Galactose metabolism";"Fructose and mannose metabolism";"Glycolysis";"Glycolysis / Gluconeogenesis";"Starch and sucrose metabolism" ID=BGER015845-PA|Name=BGER015845-PA 7 Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73980;Reactome: R-HSA-76071;Reactome: R-HSA-1834949;Reactome: R-HSA-73780;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER013580-PA|Name=BGER013580-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER027898-PA|Name=BGER027898-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER007444-PA|Name=BGER007444-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER011241-PA|Name=BGER011241-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER017194-PA|Name=BGER017194-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER020864-PA|Name=BGER020864-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER008656-PA|Name=BGER006522-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER019510-PA|Name=BGER019510-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017283-PA|Name=BGER017283-PA 1 Reactome: R-HSA-5627083 "RHO GTPases regulate CFTR trafficking" ID=BGER020028-PA|Name=BGER020028-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER002153-PA|Name=BGER002153-PA 10 MetaCyc: PWY-8001;MetaCyc: PWY-7559;MetaCyc: PWY-7112;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-6842;KEGG: 00460+2.3.2.2;MetaCyc: PWY-4041;MetaCyc: PWY-4061;MetaCyc: PWY-5826;KEGG: 00430+2.3.2.2 "Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione degradation (DUG pathway";"4-hydroxy-2-nonenal detoxification";"Glutathione metabolism";"Glutathione-mediated detoxification II";"Cyanoamino acid metabolism";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification I";"Hypoglycin biosynthesis";"Taurine and hypotaurine metabolism" ID=BGER014598-PA|Name=BGER014598-PA 7 Reactome: R-HSA-163210;Reactome: R-HSA-2151201;MetaCyc: PWY-7980;Reactome: R-HSA-8949613;KEGG: 00195+7.1.2.2;Reactome: R-HSA-1268020;KEGG: 00190+7.1.2.2 "Formation of ATP by chemiosmotic coupling";"Transcriptional activation of mitochondrial biogenesis";"ATP biosynthesis";"Cristae formation";"Photosynthesis";"Mitochondrial protein import";"Oxidative phosphorylation" ID=BGER024205-PA|Name=BGER024205-PA 12 MetaCyc: PWY-6807;Reactome: R-HSA-2160916;Reactome: R-HSA-8853383;KEGG: 00052+3.2.1.23;Reactome: R-HSA-2024096;Reactome: R-HSA-6798695;Reactome: R-HSA-2206292;KEGG: 00600+3.2.1.23;KEGG: 00511+3.2.1.25;KEGG: 00511+3.2.1.23;KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23 "Xyloglucan degradation II (exoglucanase)";"Hyaluronan uptake and degradation";"Lysosomal oligosaccharide catabolism";"Galactose metabolism";"HS-GAG degradation";"Neutrophil degranulation";"MPS VII - Sly syndrome";"Sphingolipid metabolism";"Other glycan degradation";"Other glycan degradation";"Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series" ID=BGER015234-PA|Name=BGER015234-PA 2 Reactome: R-HSA-389957;Reactome: R-HSA-8953750 "Prefoldin mediated transfer of substrate to CCT/TriC";"Transcriptional Regulation by E2F6" ID=BGER027670-PA|Name=BGER027670-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-5693568 "Fanconi Anemia Pathway";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER002581-PA|Name=BGER002581-PA 7 Reactome: R-HSA-380972;Reactome: R-HSA-9639288;Reactome: R-HSA-8943724;Reactome: R-HSA-165159;Reactome: R-HSA-5628897;Reactome: R-HSA-1632852;Reactome: R-HSA-166208 "Energy dependent regulation of mTOR by LKB1-AMPK";"Amino acids regulate mTORC1";"Regulation of PTEN gene transcription";"mTOR signalling";"TP53 Regulates Metabolic Genes";"Macroautophagy";"mTORC1-mediated signalling" ID=BGER028870-PA|Name=BGER028870-PA 3 Reactome: R-HSA-196741;KEGG: 00860+2.5.1.17;Reactome: R-HSA-3359471 "Cobalamin (Cbl, vitamin B12) transport and metabolism";"Porphyrin and chlorophyll metabolism";"Defective MMAB causes methylmalonic aciduria type cblB" ID=BGER008243-PA|Name=BGER008243-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER016237-PA|Name=BGER016237-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER007680-PA|Name=BGER007680-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" ID=BGER025969-PA|Name=BGER025969-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" ID=BGER024215-PA|Name=BGER024215-PA 3 Reactome: R-HSA-6784531;MetaCyc: PWY-7803;MetaCyc: PWY-6689 "tRNA processing in the nucleus";"Trna splicing II";"Trna splicing I" ID=BGER022187-PA|Name=BGER022187-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER025766-PA|Name=BGER025766-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012787-PA|Name=BGER012787-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER009183-PA|Name=BGER009183-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER019808-PA|Name=BGER019808-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER025226-PA|Name=BGER025226-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER024835-PA|Name=BGER024835-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER023315-PA|Name=BGER023315-PA 6 Reactome: R-HSA-1660499;MetaCyc: PWY-6368;KEGG: 00562+3.1.3.66;KEGG: 04070+3.1.3.66;Reactome: R-HSA-1855183;Reactome: R-HSA-1660516 "Synthesis of PIPs at the plasma membrane";"3-phosphoinositide degradation";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Synthesis of IP2, IP, and Ins in the cytosol";"Synthesis of PIPs at the early endosome membrane" ID=BGER021309-PA|Name=BGER021309-PA 2 Reactome: R-HSA-383280;Reactome: R-HSA-983231 "Nuclear Receptor transcription pathway";"Factors involved in megakaryocyte development and platelet production" ID=BGER021901-PA|Name=BGER021901-PA 2 MetaCyc: PWY-7250;KEGG: 00730+2.8.1.7 "[2Fe-2S] iron-sulfur cluster biosynthesis";"Thiamine metabolism" ID=BGER027447-PA|Name=BGER027447-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER007400-PA|Name=BGER007400-PA 3 Reactome: R-HSA-445355;Reactome: R-HSA-392154;KEGG: 00230+4.6.1.2 "Smooth Muscle Contraction";"Nitric oxide stimulates guanylate cyclase";"Purine metabolism" ID=BGER016457-PA|Name=BGER016457-PA 2 KEGG: 00450+6.1.1.10;KEGG: 00970+6.1.1.10 "Selenocompound metabolism";"Aminoacyl-tRNA biosynthesis" ID=BGER008920-PA|Name=BGER008920-PA 11 Reactome: R-HSA-3772470;Reactome: R-HSA-4086400;Reactome: R-HSA-373080;Reactome: R-HSA-201681;Reactome: R-HSA-5140745;Reactome: R-HSA-3238698;Reactome: R-HSA-4608870;Reactome: R-HSA-4086398;Reactome: R-HSA-8856825;Reactome: R-HSA-5099900;Reactome: R-HSA-8856828 "Negative regulation of TCF-dependent signaling by WNT ligand antagonists";"PCP/CE pathway";"Class B/2 (Secretin family receptors)";"TCF dependent signaling in response to WNT";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"WNT ligand biogenesis and trafficking";"Asymmetric localization of PCP proteins";"Ca2+ pathway";"Cargo recognition for clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD4";"Clathrin-mediated endocytosis" ID=BGER029023-PA|Name=BGER029023-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-6803205 "RAB geranylgeranylation";"TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain" ID=BGER021727-PA|Name=BGER021727-PA 10 Reactome: R-HSA-70171;KEGG: 00010+5.3.1.1;MetaCyc: PWY-1042;KEGG: 00051+5.3.1.1;KEGG: 00710+5.3.1.1;MetaCyc: PWY-7003;MetaCyc: PWY-6142;MetaCyc: PWY-5484;KEGG: 00562+5.3.1.1;Reactome: R-HSA-70263 "Glycolysis";"Glycolysis / Gluconeogenesis";"Glycolysis IV (plant cytosol)";"Fructose and mannose metabolism";"Carbon fixation in photosynthetic organisms";"Glycerol degradation to butanol";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycolysis II (from fructose 6-phosphate)";"Inositol phosphate metabolism";"Gluconeogenesis" ID=BGER018508-PA|Name=BGER018508-PA 2 Reactome: R-HSA-388479;Reactome: R-HSA-416476 "Vasopressin-like receptors";"G alpha (q) signalling events" ID=BGER017951-PA|Name=BGER017951-PA 4 Reactome: R-HSA-3214815;Reactome: R-HSA-8943724;Reactome: R-HSA-427389;Reactome: R-HSA-73762 "HDACs deacetylate histones";"Regulation of PTEN gene transcription";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"RNA Polymerase I Transcription Initiation" ID=BGER013618-PA|Name=BGER013618-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER014145-PA|Name=BGER014145-PA 5 Reactome: R-HSA-162588;Reactome: R-HSA-9615710;Reactome: R-HSA-917729;Reactome: R-HSA-9610379;Reactome: R-HSA-174490 "Budding and maturation of HIV virion";"Late endosomal microautophagy";"Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events";"Membrane binding and targetting of GAG proteins" ID=BGER012526-PA|Name=BGER012526-PA 5 Reactome: R-HSA-5218920;Reactome: R-HSA-6804757;Reactome: R-HSA-389357;Reactome: R-HSA-5674400;Reactome: R-HSA-1257604 "VEGFR2 mediated vascular permeability";"Regulation of TP53 Degradation";"CD28 dependent PI3K/Akt signaling";"Constitutive Signaling by AKT1 E17K in Cancer";"PIP3 activates AKT signaling" ID=BGER009623-PA|Name=BGER009623-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER025882-PA|Name=BGER025882-PA 2 KEGG: 00230+2.7.6.1;KEGG: 00030+2.7.6.1 "Purine metabolism";"Pentose phosphate pathway" ID=BGER007142-PA|Name=BGER007142-PA 7 KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1 "Human papillomavirus infection";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis" ID=BGER023952-PA|Name=BGER023952-PA 3 MetaCyc: PWY-3961;Reactome: R-HSA-196783;KEGG: 00770+2.7.1.33 "Phosphopantothenate biosynthesis II";"Coenzyme A biosynthesis";"Pantothenate and CoA biosynthesis" ID=BGER021307-PA|Name=BGER021307-PA 2 Reactome: R-HSA-383280;Reactome: R-HSA-983231 "Nuclear Receptor transcription pathway";"Factors involved in megakaryocyte development and platelet production" ID=BGER020012-PA|Name=BGER020012-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER000500-PA|Name=BGER000500-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER002406-PA|Name=BGER002406-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER010572-PA|Name=BGER010572-PA 2 Reactome: R-HSA-383280;Reactome: R-HSA-4090294 "Nuclear Receptor transcription pathway";"SUMOylation of intracellular receptors" ID=BGER005401-PA|Name=BGER005401-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" ID=BGER026319-PA|Name=BGER026319-PA 4 Reactome: R-HSA-5693554;Reactome: R-HSA-5693579;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)" ID=BGER010353-PA|Name=BGER010353-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2894862;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606 "Notch-HLH transcription pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants" ID=BGER020510-PA|Name=BGER020510-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER010214-PA|Name=BGER010214-PA 10 Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-8854518;Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-5576893;Reactome: R-HSA-6802952;Reactome: R-HSA-380270;Reactome: R-HSA-5576890 "Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Phase 2 - plateau phase";"Signaling by BRAF and RAF fusions";"Recruitment of mitotic centrosome proteins and complexes";"Phase 3 - rapid repolarisation" ID=BGER000271-PA|Name=BGER000271-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER028081-PA|Name=BGER028081-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER007937-PA|Name=BGER007937-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6798695 "COPI-dependent Golgi-to-ER retrograde traffic";"Neutrophil degranulation" ID=BGER007054-PA|Name=BGER007054-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER026818-PA|Name=BGER026818-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-8949664 "Mitochondrial calcium ion transport";"Processing of SMDT1" ID=BGER007164-PA|Name=BGER007164-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" ID=BGER023940-PA|Name=BGER023940-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER008890-PA|Name=BGER008890-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER021262-PA|Name=BGER021262-PA 11 Reactome: R-HSA-110314;Reactome: R-HSA-174430;Reactome: R-HSA-68962;Reactome: R-HSA-68952;Reactome: R-HSA-5696400;Reactome: R-HSA-6782135;Reactome: R-HSA-5651801;Reactome: R-HSA-5696397;Reactome: R-HSA-6782210;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942 "Recognition of DNA damage by PCNA-containing replication complex";"Telomere C-strand synthesis initiation";"Activation of the pre-replicative complex";"DNA replication initiation";"Dual Incision in GG-NER";"Dual incision in TC-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)" ID=BGER021794-PA|Name=BGER021794-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER013309-PA|Name=BGER013309-PA 1 Reactome: R-HSA-6804760 "Regulation of TP53 Activity through Methylation" ID=BGER019646-PA|Name=BGER019646-PA 1 Reactome: R-HSA-400253 "Circadian Clock" ID=BGER026101-PA|Name=BGER026101-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER009058-PA|Name=BGER009058-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER003371-PA|Name=BGER003371-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER023614-PA|Name=BGER023614-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-901032 "Protein ubiquitination";"ER Quality Control Compartment (ERQC)" ID=BGER010706-PA|Name=BGER010706-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER008637-PA|Name=BGER008637-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER009712-PA|Name=BGER009712-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER004637-PA|Name=BGER004637-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER005956-PA|Name=BGER005956-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER006467-PA|Name=BGER006467-PA 2 Reactome: R-HSA-6811436;Reactome: R-HSA-8876198 "COPI-independent Golgi-to-ER retrograde traffic";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER014804-PA|Name=BGER014804-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" ID=BGER012217-PA|Name=BGER012217-PA 2 KEGG: 00670+2.1.2.10;KEGG: 00260+2.1.2.10 "One carbon pool by folate";"Glycine, serine and threonine metabolism" ID=BGER018967-PA|Name=BGER018967-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER022106-PA|Name=BGER022106-PA 6 Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220 "Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins" ID=BGER013359-PA|Name=BGER013359-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" ID=BGER021899-PA|Name=BGER021899-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-6733;MetaCyc: PWY-7782 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis" ID=BGER027586-PA|Name=BGER027586-PA 1 Reactome: R-HSA-5578775 "Ion homeostasis" ID=BGER004425-PA|Name=BGER004425-PA 11 KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-2559580;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-171007;Reactome: R-HSA-450302;Reactome: R-HSA-4420097;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway";"Oxidative Stress Induced Senescence";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"p38MAPK events";"activated TAK1 mediates p38 MAPK activation";"VEGFA-VEGFR2 Pathway";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER003295-PA|Name=BGER003295-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021507-PA|Name=BGER021507-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER011617-PA|Name=BGER011617-PA 2 Reactome: R-HSA-445355;Reactome: R-HSA-390522 "Smooth Muscle Contraction";"Striated Muscle Contraction" ID=BGER008873-PA|Name=BGER008873-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER018000-PA|Name=BGER018000-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER005360-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER022469-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012309-PA|Name=BGER012309-PA 6 Reactome: R-HSA-5693616;Reactome: R-HSA-5693579;Reactome: R-HSA-912446;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5693554 "Presynaptic phase of homologous DNA pairing and strand exchange";"Homologous DNA Pairing and Strand Exchange";"Meiotic recombination";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" ID=BGER004112-PA|Name=BGER004112-PA 2 KEGG: 00500+2.4.1.15;Reactome: R-HSA-446205 "Starch and sucrose metabolism";"Synthesis of GDP-mannose" ID=BGER024354-PA|Name=BGER024354-PA 7 Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" ID=BGER002102-PA|Name=BGER002102-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER001090-PA|Name=BGER001090-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER009539-PA|Name=BGER009539-PA 1 Reactome: R-HSA-977443 "GABA receptor activation" ID=BGER026756-PA|Name=BGER026756-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER015763-PA|Name=BGER015763-PA 1 Reactome: R-HSA-6785631 "ERBB2 Regulates Cell Motility" ID=BGER003916-PA|Name=BGER003916-PA 2 Reactome: R-HSA-8951671;Reactome: R-HSA-2032785 "RUNX3 regulates YAP1-mediated transcription";"YAP1- and WWTR1 (TAZ)-stimulated gene expression" ID=BGER017039-PA|Name=BGER017039-PA 4 Reactome: R-HSA-75955;Reactome: R-HSA-8866654;Reactome: R-HSA-674695;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex" ID=BGER002941-PA|Name=BGER002941-PA 6 Reactome: R-HSA-674695;Reactome: R-HSA-112382;Reactome: R-HSA-8866654;Reactome: R-HSA-201722;Reactome: R-HSA-5632684;Reactome: R-HSA-75955 "RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex";"E3 ubiquitin ligases ubiquitinate target proteins";"Formation of the beta-catenin:TCF transactivating complex";"Hedgehog 'on' state";"RNA Polymerase II Transcription Elongation" ID=BGER001235-PA|Name=BGER001235-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER025999-PA|Name=BGER025999-PA 15 Reactome: R-HSA-9665245;Reactome: R-HSA-9665247;Reactome: R-HSA-9665246;Reactome: R-HSA-8863795;Reactome: R-HSA-9665249;Reactome: R-HSA-1227986;Reactome: R-HSA-9634285;Reactome: R-HSA-5637810;Reactome: R-HSA-9664565;Reactome: R-HSA-9665251;Reactome: R-HSA-1236382;Reactome: R-HSA-9665233;Reactome: R-HSA-9665250;Reactome: R-HSA-9665244;Reactome: R-HSA-9652282 "Resistance of ERBB2 KD mutants to tesevatinib";"Resistance of ERBB2 KD mutants to osimertinib";"Resistance of ERBB2 KD mutants to neratinib";"Downregulation of ERBB2 signaling";"Resistance of ERBB2 KD mutants to afatinib";"Signaling by ERBB2";"Constitutive Signaling by Overexpressed ERBB2";"Constitutive Signaling by EGFRvIII";"Signaling by ERBB2 KD Mutants";"Resistance of ERBB2 KD mutants to lapatinib";"Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants";"Resistance of ERBB2 KD mutants to trastuzumab";"Resistance of ERBB2 KD mutants to AEE788";"Resistance of ERBB2 KD mutants to sapitinib";"Drug-mediated inhibition of ERBB2 signaling" ID=BGER015767-PA|Name=BGER015767-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER017387-PA|Name=BGER017387-PA 10 Reactome: R-HSA-69473;Reactome: R-HSA-3108214;Reactome: R-HSA-6804756;Reactome: R-HSA-5693579;Reactome: R-HSA-5693607;Reactome: R-HSA-5693554;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942 "G2/M DNA damage checkpoint";"SUMOylation of DNA damage response and repair proteins";"Regulation of TP53 Activity through Phosphorylation";"Homologous DNA Pairing and Strand Exchange";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)" ID=BGER008292-PA|Name=BGER008292-PA 5 MetaCyc: PWY-7822;MetaCyc: PWY-6855;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.14;Reactome: R-HSA-189085 "Chitin degradation III (Serratia)";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Digestion of dietary carbohydrate" ID=BGER022470-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER001685-PA|Name=BGER001685-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER007639-PA|Name=BGER007639-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER000567-PA|Name=BGER000567-PA 27 Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-168276;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-170822;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-3301854;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408 "Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"NS1 Mediated Effects on Host Pathways";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"Nuclear Pore Complex (NPC) Disassembly";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism" ID=BGER029925-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER023148-PA|Name=BGER023148-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER020188-PA|Name=BGER020188-PA 3 Reactome: R-HSA-6811434;Reactome: R-HSA-6798695;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"Neutrophil degranulation";"COPI-mediated anterograde transport" ID=BGER022784-PA|Name=BGER022784-PA 4 Reactome: R-HSA-69202;Reactome: R-HSA-1362277;Reactome: R-HSA-69656;Reactome: R-HSA-8953750 "Cyclin E associated events during G1/S transition";"Transcription of E2F targets under negative control by DREAM complex";"Cyclin A:Cdk2-associated events at S phase entry";"Transcriptional Regulation by E2F6" ID=BGER010252-PA|Name=BGER010252-PA 7 KEGG: 00510+2.7.8.15;Reactome: R-HSA-446193;MetaCyc: PWY-6470;MetaCyc: PWY-5265;MetaCyc: PWY-6471;KEGG: 00550+2.7.8.13;Reactome: R-HSA-4549356 "N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Peptidoglycan biosynthesis V (beta-lactam resistance)";"Peptidoglycan biosynthesis II (staphylococci)";"Peptidoglycan biosynthesis IV (Enterococcus faecium)";"Peptidoglycan biosynthesis";"Defective DPAGT1 causes DPAGT1-CDG (CDG-1j) and CMSTA2" ID=BGER011516-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER019904-PA|Name=BGER019904-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" ID=BGER007990-PA|Name=BGER007990-PA 5 KEGG: 00250+2.6.1.16;KEGG: 00520+2.6.1.16;MetaCyc: PWY-8013;Reactome: R-HSA-446210;MetaCyc: PWY-6749 "Alanine, aspartate and glutamate metabolism";"Amino sugar and nucleotide sugar metabolism";"UDP-N-acetyl-D-galactosamine biosynthesis III";"Synthesis of UDP-N-acetyl-glucosamine";"CMP-legionaminate biosynthesis I" ID=BGER003925-PA|Name=BGER003925-PA 6 Reactome: R-HSA-6811438;Reactome: R-HSA-6807878;Reactome: R-HSA-416993;Reactome: R-HSA-204005;Reactome: R-HSA-6811440;Reactome: R-HSA-6811434 "Intra-Golgi traffic";"COPI-mediated anterograde transport";"Trafficking of GluR2-containing AMPA receptors";"COPII-mediated vesicle transport";"Retrograde transport at the Trans-Golgi-Network";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER012178-PA|Name=BGER012178-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER014174-PA|Name=BGER014174-PA 1 Reactome: R-HSA-196783 "Coenzyme A biosynthesis" ID=BGER015288-PA|Name=BGER015288-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER024663-PA|Name=BGER024663-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" ID=BGER012830-PA|Name=BGER012830-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685 "Glyoxylate and dicarboxylate metabolism";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Tryptophan metabolism";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species" ID=BGER006756-PA|Name=BGER006756-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" ID=BGER020392-PA|Name=BGER020392-PA 5 Reactome: R-HSA-6798695;KEGG: 00561+2.3.1.20;KEGG: 00073+2.3.1.20;Reactome: R-HSA-75109;Reactome: R-HSA-1482883 "Neutrophil degranulation";"Glycerolipid metabolism";"Cutin, suberine and wax biosynthesis";"Triglyceride biosynthesis";"Acyl chain remodeling of DAG and TAG" ID=BGER018423-PA|Name=BGER018423-PA 4 Reactome: R-HSA-71737;KEGG: 00190+3.6.1.1;MetaCyc: PWY-7807;MetaCyc: PWY-7805 "Pyrophosphate hydrolysis";"Oxidative phosphorylation";"Glyphosate degradation III";"(aminomethyl)phosphonate degradation" ID=BGER000559-PA|Name=BGER000559-PA 3 MetaCyc: PWY-6807;Reactome: R-HSA-6798695;KEGG: 00511+3.2.1.51 "Xyloglucan degradation II (exoglucanase)";"Neutrophil degranulation";"Other glycan degradation" ID=BGER010435-PA|Name=BGER010435-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" ID=BGER002473-PA|Name=BGER002473-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER003908-PA|Name=BGER003908-PA 1 Reactome: R-HSA-1660499 "Synthesis of PIPs at the plasma membrane" ID=BGER026437-PA|Name=BGER026437-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER014706-PA|Name=BGER014706-PA 1 Reactome: R-HSA-1237044 "Erythrocytes take up carbon dioxide and release oxygen" ID=BGER027891-PA|Name=BGER027891-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER012353-PA|Name=BGER012353-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER020965-PA|Name=BGER020965-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER016270-PA|Name=BGER016270-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER013593-PA|Name=BGER013593-PA 2 Reactome: R-HSA-6782315;MetaCyc: PWY-6829 "tRNA modification in the nucleus and cytosol";"Trna methylation (yeast)" ID=BGER016402-PA|Name=BGER016402-PA 1 Reactome: R-HSA-427652 "Sodium-coupled phosphate cotransporters" ID=BGER015697-PA|Name=BGER015697-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER000689-PA|Name=BGER000689-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER014392-PA|Name=BGER014392-PA 1 KEGG: 00970+6.1.1.5 "Aminoacyl-tRNA biosynthesis" ID=BGER008736-PA|Name=BGER008736-PA 19 Reactome: R-HSA-8964026;Reactome: R-HSA-3000480;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825;Reactome: R-HSA-8963901;Reactome: R-HSA-8964046;Reactome: R-HSA-8957275;Reactome: R-HSA-8964038;Reactome: R-HSA-432142;Reactome: R-HSA-381426;Reactome: R-HSA-5686938;Reactome: R-HSA-8964041;Reactome: R-HSA-3000484;Reactome: R-HSA-8963888;Reactome: R-HSA-8866423;Reactome: R-HSA-3000471;Reactome: R-HSA-202733;Reactome: R-HSA-975634;Reactome: R-HSA-3000497 "Chylomicron clearance";"Scavenging by Class A Receptors";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis";"Chylomicron remodeling";"VLDL clearance";"Post-translational protein phosphorylation";"LDL clearance";"Platelet sensitization by LDL";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Regulation of TLR by endogenous ligand";"LDL remodeling";"Scavenging by Class F Receptors";"Chylomicron assembly";"VLDL assembly";"Scavenging by Class B Receptors";"Cell surface interactions at the vascular wall";"Retinoid metabolism and transport";"Scavenging by Class H Receptors" ID=BGER022828-PA|Name=BGER022828-PA 1 Reactome: R-HSA-8963889 "Assembly of active LPL and LIPC lipase complexes" ID=BGER004321-PA|Name=BGER004321-PA 4 Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex" ID=BGER019218-PA|Name=BGER019218-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER007013-PA|Name=BGER007013-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" ID=BGER001381-PA|Name=BGER001381-PA 3 Reactome: R-HSA-1614558;Reactome: R-HSA-1614603;Reactome: R-HSA-2408508 "Degradation of cysteine and homocysteine";"Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se" ID=BGER009096-PA|Name=BGER009096-PA 6 Reactome: R-HSA-975957;Reactome: R-HSA-159236;Reactome: R-HSA-9010553;Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-73856 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of expression of SLITs and ROBOs";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination" ID=BGER029841-PA|Name=BGER029841-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Wax biosynthesis";"Wax esters biosynthesis I";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER004483-PA|Name=BGER004483-PA 1 Reactome: R-HSA-8849175 "Threonine catabolism" ID=BGER024968-PA|Name=BGER024968-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER021284-PA|Name=BGER021284-PA 20 MetaCyc: PWY-7726;KEGG: 00410+1.3.3.6;MetaCyc: PWY-7858;MetaCyc: PWY-5136;Reactome: R-HSA-9033241;MetaCyc: PWY-7337;MetaCyc: PWY-7340;MetaCyc: PWY-7854;MetaCyc: PWY-735;MetaCyc: PWY-7007;MetaCyc: PWY-7291;MetaCyc: PWY-6837;KEGG: 00071+1.3.3.6;MetaCyc: PWY-7288;MetaCyc: PWY-7574;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7338;MetaCyc: PWY-6920;KEGG: 00592+1.3.3.6;MetaCyc: PWY-7606 "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"beta-Alanine metabolism";"(5Z)-dodecenoate biosynthesis II";"Fatty acid beta-oxidation II (plant peroxisome)";"Peroxisomal protein import";"10-cis-heptadecenoyl-CoA degradation (yeast)";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"Jasmonic acid biosynthesis";"Methyl ketone biosynthesis (engineered)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"Fatty acid degradation";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Propanoyl-coa degradation II";"Propanoate metabolism";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"6-gingerol analog biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)" ID=BGER026538-PA|Name=BGER026538-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER019880-PA|Name=BGER019880-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" ID=BGER024698-PA|Name=BGER024698-PA 34 Reactome: R-HSA-9610379;Reactome: R-HSA-141444;Reactome: R-HSA-168276;Reactome: R-HSA-9648025;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-5663220;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-5578749;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-4085377;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-180910;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-9639288;Reactome: R-HSA-168333;Reactome: R-HSA-2500257;Reactome: R-HSA-180746;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-1169408;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690 "HCMV Late Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"NS1 Mediated Effects on Host Pathways";"EML4 and NUDC in mitotic spindle formation";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"RHO GTPases Activate Formins";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transcriptional regulation by small RNAs";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of SUMOylation proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"Vpr-mediated nuclear import of PICs";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Amino acids regulate mTORC1";"NEP/NS2 Interacts with the Cellular Export Machinery";"Resolution of Sister Chromatid Cohesion";"Nuclear import of Rev protein";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"ISG15 antiviral mechanism";"SUMOylation of DNA replication proteins";"HCMV Early Events" ID=BGER017635-PA|Name=BGER017635-PA 182 Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5675482;Reactome: R-HSA-445989;Reactome: R-HSA-6804757;Reactome: R-HSA-5654732;Reactome: R-HSA-8866652;Reactome: R-HSA-5689901;Reactome: R-HSA-8856825;Reactome: R-HSA-9014325;Reactome: R-HSA-174490;Reactome: R-HSA-937039;Reactome: R-HSA-8951664;Reactome: R-HSA-5675221;Reactome: R-HSA-5607761;Reactome: R-HSA-9646399;Reactome: R-HSA-5656169;Reactome: R-HSA-5696395;Reactome: R-HSA-532668;Reactome: R-HSA-2467813;Reactome: R-HSA-975957;Reactome: R-HSA-2672351;Reactome: R-HSA-3322077;Reactome: R-HSA-4641263;Reactome: R-HSA-5632684;Reactome: R-HSA-9013507;Reactome: R-HSA-5693565;Reactome: R-HSA-8852276;Reactome: R-HSA-5357956;Reactome: R-HSA-9633012;Reactome: R-HSA-5358346;Reactome: R-HSA-937041;Reactome: R-HSA-400253;Reactome: R-HSA-180534;Reactome: R-HSA-5689877;Reactome: R-HSA-192823;Reactome: R-HSA-69601;Reactome: R-HSA-977225;Reactome: R-HSA-75815;Reactome: R-HSA-1295596;Reactome: R-HSA-1236974;Reactome: R-HSA-182971;Reactome: R-HSA-936964;Reactome: R-HSA-937072;Reactome: R-HSA-5696397;Reactome: R-HSA-8863795;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-2565942;Reactome: R-HSA-5205685;Reactome: R-HSA-6804756;Reactome: R-HSA-69231;Reactome: R-HSA-156827;Reactome: R-HSA-72706;Reactome: R-HSA-5684264;Reactome: R-HSA-5610783;Reactome: R-HSA-72764;Reactome: R-HSA-975110;Reactome: R-HSA-110314;Reactome: R-HSA-3134975;Reactome: R-HSA-975163;Reactome: R-HSA-2122947;Reactome: R-HSA-9636383;Reactome: R-HSA-5655862;Reactome: R-HSA-937042;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-8856828;Reactome: R-HSA-975144;Reactome: R-HSA-2691232;Reactome: R-HSA-917729;Reactome: R-HSA-174113;Reactome: R-HSA-1169408;Reactome: R-HSA-168928;Reactome: R-HSA-2644606;Reactome: R-HSA-6781827;Reactome: R-HSA-2122948;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603;Reactome: R-HSA-2173791;Reactome: R-HSA-110320;Reactome: R-HSA-8876493;Reactome: R-HSA-975956;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-5696400;Reactome: R-HSA-1253288;Reactome: R-HSA-9013973;Reactome: R-HSA-382556;Reactome: R-HSA-8948747;Reactome: R-HSA-3785653;Reactome: R-HSA-72695;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-2559580;Reactome: R-HSA-69541;Reactome: R-HSA-8849469;Reactome: R-HSA-5654726;Reactome: R-HSA-2173796;Reactome: R-HSA-983168;Reactome: R-HSA-450321;Reactome: R-HSA-2979096;Reactome: R-HSA-5362768;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-9637628;Reactome: R-HSA-5656121;Reactome: R-HSA-6781823;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-936440;Reactome: R-HSA-5357905;Reactome: R-HSA-901032;Reactome: R-HSA-72689;Reactome: R-HSA-8866654;Reactome: R-HSA-209560;Reactome: R-HSA-201681;Reactome: R-HSA-3769402;Reactome: R-HSA-4641257;Reactome: R-HSA-156902;Reactome: R-HSA-2559582;Reactome: R-HSA-2173788;Reactome: R-HSA-174184;Reactome: R-HSA-175474;Reactome: R-HSA-110312;Reactome: R-HSA-8939902;Reactome: R-HSA-72702;Reactome: R-HSA-9615710;Reactome: R-HSA-5654727;Reactome: R-HSA-6782135;Reactome: R-HSA-174154;Reactome: R-HSA-5658442;Reactome: R-HSA-174084;Reactome: R-HSA-211733;Reactome: R-HSA-174048;Reactome: R-HSA-1236382;Reactome: R-HSA-5676590;Reactome: R-HSA-205043;Reactome: R-HSA-2408557;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-9645460;Reactome: R-HSA-1799339;Reactome: R-HSA-5668541;Reactome: R-HSA-1358803;Reactome: R-HSA-168927;Reactome: R-HSA-179409;Reactome: R-HSA-6804760;Reactome: R-HSA-69017;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-6807004;Reactome: R-HSA-2894862;Reactome: R-HSA-72649;Reactome: R-HSA-168638;Reactome: R-HSA-5696394;Reactome: R-HSA-2173795;Reactome: R-HSA-912631;Reactome: R-HSA-6782210;Reactome: R-HSA-5689896;Reactome: R-HSA-5685942;Reactome: R-HSA-5654733;Reactome: R-HSA-6783310;Reactome: R-HSA-450302;Reactome: R-HSA-5693607;Reactome: R-HSA-5678895;Reactome: R-HSA-2559585;Reactome: R-HSA-6791226;Reactome: R-HSA-162588;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-9033241;Reactome: R-HSA-9613829;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-209543;Reactome: R-HSA-917937;Reactome: R-HSA-8875360 "CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Regulation of necroptotic cell death";"TAK1 activates NFkB by phosphorylation and activation of IKKs complex";"Regulation of TP53 Degradation";"Negative regulation of FGFR3 signaling";"Synthesis of active ubiquitin: roles of E1 and E2 enzymes";"Metalloprotease DUBs";"Cargo recognition for clathrin-mediated endocytosis";"TICAM1,TRAF6-dependent induction of TAK1 complex";"Membrane binding and targetting of GAG proteins";"IRAK1 recruits IKK complex";"Neddylation";"Negative regulation of MAPK pathway";"Dectin-1 mediated noncanonical NF-kB signaling";"Aggrephagy";"Termination of translesion DNA synthesis";"Formation of Incision Complex in GG-NER";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Separation of Sister Chromatids";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Stimuli-sensing channels";"Glycogen synthesis";"Regulation of FZD by ubiquitination";"Hedgehog 'on' state";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"The role of GTSE1 in G2/M progression after G2 checkpoint";"TNFR1-induced NFkappaB signaling pathway";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Hedgehog ligand biogenesis";"IKK complex recruitment mediated by RIP1";"Circadian Clock";"Vpu mediated degradation of CD4";"Josephin domain DUBs";"Viral mRNA Translation";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Amyloid fiber formation";"Ubiquitin-dependent degradation of Cyclin D";"Spry regulation of FGF signaling";"ER-Phagosome pathway";"EGFR downregulation";"Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon";"TRAF6-mediated induction of TAK1 complex within TLR4 complex";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Downregulation of ERBB2 signaling";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of PLK1 Activity at G2/M Transition";"Pink/Parkin Mediated Mitophagy";"Regulation of TP53 Activity through Phosphorylation";"Cyclin D associated events in G1";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"Degradation of GLI2 by the proteasome";"Eukaryotic Translation Termination";"TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling";"Recognition of DNA damage by PCNA-containing replication complex";"Regulation of innate immune responses to cytosolic DNA";"IRAK2 mediated activation of TAK1 complex upon TLR7/8 or 9 stimulation";"NOTCH1 Intracellular Domain Regulates Transcription";"Prevention of phagosomal-lysosomal fusion";"Translesion synthesis by POLK";"IRAK2 mediated activation of TAK1 complex";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"Clathrin-mediated endocytosis";"IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Endosomal Sorting Complex Required For Transport (ESCRT)";"SCF-beta-TrCP mediated degradation of Emi1";"ISG15 antiviral mechanism";"DDX58/IFIH1-mediated induction of interferon-alpha/beta";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Activated NOTCH1 Transmits Signal to the Nucleus";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Activation of NF-kappaB in B cells";"UCH proteinases";"TGF-beta receptor signaling in EMT (epithelial to mesenchymal transition)";"Translesion Synthesis by POLH";"InlA-mediated entry of Listeria monocytogenes into host cells";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Dual Incision in GG-NER";"Downregulation of ERBB4 signaling";"TICAM1-dependent activation of IRF3/IRF7";"ABC-family proteins mediated transport";"Regulation of PTEN localization";"Myoclonic epilepsy of Lafora";"Formation of the ternary complex, and subsequently, the 43S complex";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"Oxidative Stress Induced Senescence";"Stabilization of p53";"PTK6 Regulates RTKs and Their Effectors AKT1 and DOK1";"Negative regulation of FGFR1 signaling";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Antigen processing: Ubiquitination & Proteasome degradation";"JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Degradation of DVL";"Ub-specific processing proteases";"Modulation by Mtb of host immune system";"Translesion synthesis by POLI";"Formation of TC-NER Pre-Incision Complex";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Negative regulators of DDX58/IFIH1 signaling";"Regulation of TNFR1 signaling";"ER Quality Control Compartment (ERQC)";"Formation of a pool of free 40S subunits";"E3 ubiquitin ligases ubiquitinate target proteins";"NF-kB is activated and signals survival";"TCF dependent signaling in response to WNT";"Deactivation of the beta-catenin transactivating complex";"Degradation of AXIN";"Peptide chain elongation";"Senescence-Associated Secretory Phenotype (SASP)";"Downregulation of TGF-beta receptor signaling";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Assembly Of The HIV Virion";"Translesion synthesis by REV1";"Regulation of RUNX2 expression and activity";"Ribosomal scanning and start codon recognition";"Late endosomal microautophagy";"Negative regulation of FGFR2 signaling";"Dual incision in TC-NER";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RAS by GAPs";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"APC/C:Cdc20 mediated degradation of Cyclin B";"Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants";"NIK-->noncanonical NF-kB signaling";"NRIF signals cell death from the nucleus";"Selenocysteine synthesis";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Alpha-protein kinase 1 signaling pathway";"SRP-dependent cotranslational protein targeting to membrane";"TNFR2 non-canonical NF-kB pathway";"Downregulation of ERBB2:ERBB3 signaling";"TICAM1, RIP1-mediated IKK complex recruitment";"APC-Cdc20 mediated degradation of Nek2A";"Regulation of TP53 Activity through Methylation";"CDK-mediated phosphorylation and removal of Cdc6";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"Negative regulation of MET activity";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Translation initiation complex formation";"NOD1/2 Signaling Pathway";"DNA Damage Recognition in GG-NER";"Downregulation of SMAD2/3:SMAD4 transcriptional activity";"Regulation of signaling by CBL";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Ovarian tumor domain proteases";"HDR through Homologous Recombination (HRR)";"Negative regulation of FGFR4 signaling";"Fanconi Anemia Pathway";"activated TAK1 mediates p38 MAPK activation";"Processing of DNA double-strand break ends";"Defective CFTR causes cystic fibrosis";"Oncogene Induced Senescence";"Major pathway of rRNA processing in the nucleolus and cytosol";"Budding and maturation of HIV virion";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Peroxisomal protein import";"Chaperone Mediated Autophagy";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"p75NTR recruits signalling complexes";"Iron uptake and transport";"InlB-mediated entry of Listeria monocytogenes into host cell" ID=BGER028168-PA|Name=BGER028168-PA 5 MetaCyc: PWY-4981;MetaCyc: PWY-3341;Reactome: R-HSA-8964539;KEGG: 00330+1.5.1.2;MetaCyc: PWY-6344 "L-proline biosynthesis II (from arginine)";"L-proline biosynthesis III (from L-ornithine)";"Glutamate and glutamine metabolism";"Arginine and proline metabolism";"L-ornithine degradation II (Stickland reaction)" ID=BGER014184-PA|Name=BGER014184-PA 10 KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23;KEGG: 00511+3.2.1.23;Reactome: R-HSA-6798695;Reactome: R-HSA-2024096;Reactome: R-HSA-2206292;KEGG: 00600+3.2.1.23;Reactome: R-HSA-2160916;KEGG: 00052+3.2.1.23;MetaCyc: PWY-6807 "Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Other glycan degradation";"Neutrophil degranulation";"HS-GAG degradation";"MPS VII - Sly syndrome";"Sphingolipid metabolism";"Hyaluronan uptake and degradation";"Galactose metabolism";"Xyloglucan degradation II (exoglucanase)" ID=BGER013019-PA|Name=BGER013019-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER020554-PA|Name=BGER020554-PA 26 Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-389960;Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-5626467;Reactome: R-HSA-380320;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-389977;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690 "Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"Formation of tubulin folding intermediates by CCT/TriC";"Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"RHO GTPases activate IQGAPs";"Recruitment of NuMA to mitotic centrosomes";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Post-chaperonin tubulin folding pathway";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"COPI-mediated anterograde transport";"HCMV Early Events" ID=BGER028076-PA|Name=BGER028076-PA 3 KEGG: 00790+6.3.2.17;Reactome: R-HSA-196757;MetaCyc: PWY-2161 "Folate biosynthesis";"Metabolism of folate and pterines";"Folate polyglutamylation" ID=BGER021244-PA|Name=BGER021244-PA 7 KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER015423-PA|Name=BGER015423-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER012872-PA|Name=BGER012872-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER023924-PA|Name=BGER023924-PA 1 Reactome: R-HSA-1855231 "Synthesis of IPs in the ER lumen" ID=BGER022621-PA|Name=BGER022621-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER016715-PA|Name=BGER016715-PA 6 Reactome: R-HSA-5693607;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-6804756;Reactome: R-HSA-176187;Reactome: R-HSA-69473 "Processing of DNA double-strand break ends";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Regulation of TP53 Activity through Phosphorylation";"Activation of ATR in response to replication stress";"G2/M DNA damage checkpoint" ID=BGER020541-PA|Name=BGER020541-PA 4 Reactome: R-HSA-6811434;Reactome: R-HSA-2132295;Reactome: R-HSA-983189;Reactome: R-HSA-68884 "COPI-dependent Golgi-to-ER retrograde traffic";"MHC class II antigen presentation";"Kinesins";"Mitotic Telophase/Cytokinesis" ID=BGER024517-PA|Name=BGER024517-PA 3 Reactome: R-HSA-1660516;Reactome: R-HSA-1660517;Reactome: R-HSA-1660514 "Synthesis of PIPs at the early endosome membrane";"Synthesis of PIPs at the late endosome membrane";"Synthesis of PIPs at the Golgi membrane" ID=BGER001370-PA|Name=BGER001370-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER005369-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER014810-PA|Name=BGER014810-PA 3 Reactome: R-HSA-390471;Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "Association of TriC/CCT with target proteins during biosynthesis";"COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER027342-PA|Name=BGER027342-PA 57 Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5658442;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5689603;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-195253 "Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of RAS by GAPs";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"UCH proteinases";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Degradation of beta-catenin by the destruction complex" ID=BGER015067-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER007654-PA|Name=BGER007654-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823 "Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation" ID=BGER010711-PA|Name=BGER010711-PA 3 Reactome: R-HSA-936837;Reactome: R-HSA-418359;Reactome: R-HSA-5578775 "Ion transport by P-type ATPases";"Reduction of cytosolic Ca++ levels";"Ion homeostasis" ID=BGER022461-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER021932-PA|Name=BGER021932-PA 10 KEGG: 00511+3.2.1.23;KEGG: 00604+3.2.1.23;KEGG: 00531+3.2.1.23;MetaCyc: PWY-6807;KEGG: 00052+3.2.1.23;Reactome: R-HSA-2160916;Reactome: R-HSA-2206292;KEGG: 00600+3.2.1.23;Reactome: R-HSA-6798695;Reactome: R-HSA-2024096 "Other glycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Glycosaminoglycan degradation";"Xyloglucan degradation II (exoglucanase)";"Galactose metabolism";"Hyaluronan uptake and degradation";"MPS VII - Sly syndrome";"Sphingolipid metabolism";"Neutrophil degranulation";"HS-GAG degradation" ID=BGER000017-PA|Name=BGER000017-PA 1 Reactome: R-HSA-2470946 "Cohesin Loading onto Chromatin" ID=BGER009622-PA|Name=BGER009622-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER015899-PA|Name=BGER015899-PA 10 MetaCyc: PWY-6453;MetaCyc: PWY-8053;MetaCyc: PWY-8051;MetaCyc: PWY-7411;KEGG: 00561+2.3.1.15;MetaCyc: PWY-5667;MetaCyc: PWY-7587;KEGG: 00564+2.3.1.15;Reactome: R-HSA-1483166;MetaCyc: PWY-8055 "Stigma estolide biosynthesis";"Anandamide biosynthesis II";"Anandamide biosynthesis I";"Phosphatidate biosynthesis (yeast)";"Glycerolipid metabolism";"CDP-diacylglycerol biosynthesis I";"Oleate biosynthesis III (cyanobacteria)";"Glycerophospholipid metabolism";"Synthesis of PA";"Palmitoyl ethanolamide biosynthesis" ID=BGER002462-PA|Name=BGER002462-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER018334-PA|Name=BGER018334-PA 8 Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68616;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68689 "Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"Assembly of the ORC complex at the origin of replication";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"CDC6 association with the ORC:origin complex" ID=BGER010319-PA|Name=BGER010319-PA 4 Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3;KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219 "Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis" ID=BGER008731-PA|Name=BGER008731-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER015583-PA|Name=BGER015583-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-194840;Reactome: R-HSA-416482 "NRAGE signals death through JNK";"Rho GTPase cycle";"G alpha (12/13) signalling events" ID=BGER001426-PA|Name=BGER001426-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER025964-PA|Name=BGER025964-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER013302-PA|Name=BGER013302-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER010728-PA|Name=BGER010728-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" ID=BGER010070-PA|Name=BGER010070-PA 6 Reactome: R-HSA-73856;Reactome: R-HSA-72165;Reactome: R-HSA-111367;Reactome: R-HSA-191859;Reactome: R-HSA-72163;Reactome: R-HSA-77588 "RNA Polymerase II Transcription Termination";"mRNA Splicing - Minor Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"snRNP Assembly";"mRNA Splicing - Major Pathway";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs" ID=BGER024041-PA|Name=BGER024041-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER024764-PA|Name=BGER024764-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER002940-PA|Name=BGER002940-PA 6 Reactome: R-HSA-75955;Reactome: R-HSA-201722;Reactome: R-HSA-5632684;Reactome: R-HSA-8866654;Reactome: R-HSA-674695;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"Formation of the beta-catenin:TCF transactivating complex";"Hedgehog 'on' state";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex" ID=BGER007757-PA|Name=BGER007757-PA 1 Reactome: R-HSA-212436 "Generic Transcription Pathway" ID=BGER026703-PA|Name=BGER026703-PA 5 Reactome: R-HSA-6798695;MetaCyc: PWY-7204;Reactome: R-HSA-964975;KEGG: 00750+2.7.1.35;MetaCyc: PWY-7282 "Neutrophil degranulation";"Pyridoxal 5'-phosphate salvage II (plants)";"Vitamins B6 activation to pyridoxal phosphate";"Vitamin B6 metabolism";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis" ID=BGER012623-PA|Name=BGER012623-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER017183-PA|Name=BGER017183-PA 7 Reactome: R-HSA-2122948;Reactome: R-HSA-2979096;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862;Reactome: R-HSA-2660826;Reactome: R-HSA-2691232 "Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Constitutive Signaling by NOTCH1 HD Domain Mutants" ID=BGER025220-PA|Name=BGER025220-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER019270-PA|Name=BGER019270-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER024135-PA|Name=BGER024135-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER028288-PA|Name=BGER028288-PA 14 MetaCyc: PWY-2221;MetaCyc: PWY-5484;MetaCyc: PWY-6142;MetaCyc: PWY-7003;MetaCyc: PWY-1622;KEGG: 00680+4.2.1.11;MetaCyc: PWY-8004;KEGG: 00010+4.2.1.11;MetaCyc: PWY-6886;MetaCyc: PWY-5723;MetaCyc: PWY-6901;MetaCyc: PWY-1042;MetaCyc: PWY-7218;MetaCyc: PWY-7124 "Entner-Doudoroff pathway III (semi-phosphorylative)";"Glycolysis II (from fructose 6-phosphate)";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycerol degradation to butanol";"Formaldehyde assimilation I (serine pathway)";"Methane metabolism";"Entner-Doudoroff pathway I";"Glycolysis / Gluconeogenesis";"1-butanol autotrophic biosynthesis (engineered)";"Rubisco shunt";"Superpathway of glucose and xylose degradation";"Glycolysis IV (plant cytosol)";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Ethylene biosynthesis V (engineered)" ID=BGER002255-PA|Name=BGER002255-PA 7 Reactome: R-HSA-5628897;Reactome: R-HSA-166208;Reactome: R-HSA-1632852;Reactome: R-HSA-9639288;Reactome: R-HSA-380972;Reactome: R-HSA-165159;Reactome: R-HSA-8943724 "TP53 Regulates Metabolic Genes";"mTORC1-mediated signalling";"Macroautophagy";"Amino acids regulate mTORC1";"Energy dependent regulation of mTOR by LKB1-AMPK";"mTOR signalling";"Regulation of PTEN gene transcription" ID=BGER015680-PA|Name=BGER015680-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER016783-PA|Name=BGER016783-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER018780-PA|Name=BGER018780-PA 2 Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" ID=BGER001098-PA|Name=BGER001098-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER017348-PA|Name=BGER017348-PA 3 Reactome: R-HSA-76071;Reactome: R-HSA-6807505;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase III Abortive And Retractive Initiation" ID=BGER010448-PA|Name=BGER010448-PA 1 Reactome: R-HSA-5658442 "Regulation of RAS by GAPs" ID=BGER026410-PC|Name=BGER026410-PC 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER002402-PA|Name=BGER002402-PA 7 MetaCyc: PWY-6824;MetaCyc: PWY-7214;MetaCyc: PWY-5469;MetaCyc: PWY-5461;KEGG: 00940+1.11.1.7;MetaCyc: PWY-5466;MetaCyc: PWY-7445 "Justicidin B biosynthesis";"Baicalein degradation (hydrogen peroxide detoxification)";"Sesamin biosynthesis";"Betanidin degradation";"Phenylpropanoid biosynthesis";"Matairesinol biosynthesis";"Luteolin triglucuronide degradation" ID=BGER004549-PA|Name=BGER004549-PA 1 Reactome: R-HSA-110362 "POLB-Dependent Long Patch Base Excision Repair" ID=BGER022473-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER023456-PA|Name=BGER023456-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER006195-PA|Name=BGER006195-PA 2 Reactome: R-HSA-9634600;KEGG: 00051+2.7.1.105+3.1.3.46 "Regulation of glycolysis by fructose 2,6-bisphosphate metabolism";"Fructose and mannose metabolism" ID=BGER025400-PA|Name=BGER025400-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER003693-PA|Name=BGER003693-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER005472-PA|Name=BGER005472-PA 2 KEGG: 00480+1.11.1.15;Reactome: R-HSA-3299685 "Glutathione metabolism";"Detoxification of Reactive Oxygen Species" ID=BGER017190-PA|Name=BGER017190-PA 2 Reactome: R-HSA-5689880;Reactome: R-HSA-1632852 "Ub-specific processing proteases";"Macroautophagy" ID=BGER003419-PA|Name=BGER003419-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER010279-PA|Name=BGER010279-PA 32 Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-113418;Reactome: R-HSA-75953;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-8851708;Reactome: R-HSA-167246;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-112382;Reactome: R-HSA-167161;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-167172;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-72165;Reactome: R-HSA-72086;Reactome: R-HSA-6796648 "RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Formation of the Early Elongation Complex";"RNA Polymerase II Transcription Initiation";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"Signaling by FGFR2 IIIa TM";"Tat-mediated elongation of the HIV-1 transcript";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Formation of RNA Pol II elongation complex";"HIV Transcription Initiation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"Transcription of the HIV genome";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"mRNA Splicing - Minor Pathway";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes" ID=BGER002253-PA|Name=BGER002253-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER010501-PA|Name=BGER010501-PA 6 MetaCyc: PWY-6737;MetaCyc: PWY-7238;MetaCyc: PWY-6731;Reactome: R-HSA-70221;MetaCyc: PWY-5941;KEGG: 00500+2.4.1.1 "Starch degradation V";"Sucrose biosynthesis II";"Starch degradation III";"Glycogen breakdown (glycogenolysis)";"Glycogen degradation II";"Starch and sucrose metabolism" ID=BGER017345-PA|Name=BGER017345-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER014192-PA|Name=BGER014192-PA 10 Reactome: R-HSA-2160916;KEGG: 00052+3.2.1.23;Reactome: R-HSA-2024096;Reactome: R-HSA-6798695;KEGG: 00600+3.2.1.23;Reactome: R-HSA-2206292;MetaCyc: PWY-6807;KEGG: 00511+3.2.1.23;KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23 "Hyaluronan uptake and degradation";"Galactose metabolism";"HS-GAG degradation";"Neutrophil degranulation";"Sphingolipid metabolism";"MPS VII - Sly syndrome";"Xyloglucan degradation II (exoglucanase)";"Other glycan degradation";"Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series" ID=BGER015905-PA|Name=BGER015905-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" ID=BGER001027-PA|Name=BGER001027-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" ID=BGER017191-PA|Name=BGER017191-PA 1 KEGG: 00970+6.1.1.2 "Aminoacyl-tRNA biosynthesis" ID=BGER014952-PA|Name=BGER014952-PA 11 Reactome: R-HSA-3214847;Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-674695;Reactome: R-HSA-6804756;Reactome: R-HSA-5689880;Reactome: R-HSA-167161;Reactome: R-HSA-167162;Reactome: R-HSA-75953 "HATs acetylate histones";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Pre-transcription Events";"Regulation of TP53 Activity through Phosphorylation";"Ub-specific processing proteases";"HIV Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation" ID=BGER019375-PA|Name=BGER019375-PA 2 KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" ID=BGER011538-PA|Name=BGER011538-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER017569-PA|Name=BGER017569-PA 5 Reactome: R-HSA-68827;Reactome: R-HSA-68949;Reactome: R-HSA-69205;Reactome: R-HSA-68867;Reactome: R-HSA-68962 "CDT1 association with the CDC6:ORC:origin complex";"Orc1 removal from chromatin";"G1/S-Specific Transcription";"Assembly of the pre-replicative complex";"Activation of the pre-replicative complex" ID=BGER004100-PA|Name=BGER004100-PA 2 Reactome: R-HSA-5620924;Reactome: R-HSA-5610787 "Intraflagellar transport";"Hedgehog 'off' state" ID=BGER022454-PA|Name=BGER022454-PA 1 Reactome: R-HSA-198933 "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" ID=BGER008016-PA|Name=BGER008016-PA 1 Reactome: R-HSA-1655829 "Regulation of cholesterol biosynthesis by SREBP (SREBF)" ID=BGER022277-PA|Name=BGER022277-PA 3 Reactome: R-HSA-5696394;Reactome: R-HSA-5689877;Reactome: R-HSA-5696395 "DNA Damage Recognition in GG-NER";"Josephin domain DUBs";"Formation of Incision Complex in GG-NER" ID=BGER027397-PA|Name=BGER027397-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER029022-PA|Name=BGER029022-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER026535-PA|Name=BGER026535-PA 3 Reactome: R-HSA-9645722;Reactome: R-HSA-140837;Reactome: R-HSA-111471 "Defective Intrinsic Pathway for Apoptosis Due to p14ARF Loss of Function";"Intrinsic Pathway of Fibrin Clot Formation";"Apoptotic factor-mediated response" ID=BGER007186-PA|Name=BGER007186-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER017291-PA|Name=BGER017291-PA 8 MetaCyc: PWY-241;MetaCyc: PWY-5744;MetaCyc: PWY-5743;MetaCyc: PWY-6142;MetaCyc: PWY-7117;KEGG: 00910+4.2.1.1;MetaCyc: PWY-5789;MetaCyc: PWY-7115 "C4 photosynthetic carbon assimilation cycle, NADP-ME type";"Glyoxylate assimilation";"3-hydroxypropanoate cycle";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Nitrogen metabolism";"3-hydroxypropanoate/4-hydroxybutanate cycle";"C4 photosynthetic carbon assimilation cycle, NAD-ME type" ID=BGER015779-PA|Name=BGER015779-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER017787-PA|Name=BGER017787-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" ID=BGER009417-PA|Name=BGER009417-PA 5 Reactome: R-HSA-1989781;Reactome: R-HSA-211945;Reactome: R-HSA-8937144;Reactome: R-HSA-211976;Reactome: R-HSA-211981 "PPARA activates gene expression";"Phase I - Functionalization of compounds";"Aryl hydrocarbon receptor signalling";"Endogenous sterols";"Xenobiotics" ID=BGER003193-PA|Name=BGER003193-PA 1 Reactome: R-HSA-1221632 "Meiotic synapsis" ID=BGER017086-PA|Name=BGER017086-PA 9 Reactome: R-HSA-69231;Reactome: R-HSA-1362300;Reactome: R-HSA-1362277;Reactome: R-HSA-2173796;Reactome: R-HSA-6804114;Reactome: R-HSA-69656;Reactome: R-HSA-69205;Reactome: R-HSA-1538133;Reactome: R-HSA-69202 "Cyclin D associated events in G1";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Transcription of E2F targets under negative control by DREAM complex";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest";"Cyclin A:Cdk2-associated events at S phase entry";"G1/S-Specific Transcription";"G0 and Early G1";"Cyclin E associated events during G1/S transition" ID=BGER013631-PA|Name=BGER013631-PA 16 KEGG: 00640+6.2.1.5;MetaCyc: PWY-6969;MetaCyc: PWY-5392;KEGG: 00720+6.2.1.5;MetaCyc: PWY-5537;KEGG: 00020+6.2.1.4;MetaCyc: PWY-5749;MetaCyc: PWY-7384;MetaCyc: PWY-5690;Reactome: R-HSA-71403;MetaCyc: PWY-5538;KEGG: 00640+6.2.1.4;KEGG: 00660+6.2.1.5;KEGG: 00020+6.2.1.5;MetaCyc: PWY-6728;MetaCyc: PWY-5913 "Propanoate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"Carbon fixation pathways in prokaryotes";"Pyruvate fermentation to acetate V";"Citrate cycle (TCA cycle)";"Itaconate degradation";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"TCA cycle II (plants and fungi)";"Citric acid cycle (TCA cycle)";"Pyruvate fermentation to acetate VI";"Propanoate metabolism";"C5-Branched dibasic acid metabolism";"Citrate cycle (TCA cycle)";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)" ID=BGER017566-PA|Name=BGER017566-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER012205-PA|Name=BGER012205-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" ID=BGER001665-PA|Name=BGER001665-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" ID=BGER022352-PA|Name=BGER022352-PA 4 KEGG: 00270+1.13.11.20;MetaCyc: PWY-5331;Reactome: R-HSA-1614558;KEGG: 00430+1.13.11.20 "Cysteine and methionine metabolism";"Taurine biosynthesis I";"Degradation of cysteine and homocysteine";"Taurine and hypotaurine metabolism" ID=BGER002459-PA|Name=BGER002459-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER019149-PA|Name=BGER019149-PA 1 Reactome: R-HSA-420029 "Tight junction interactions" ID=BGER010038-PB|Name=BGER010038-PB 8 KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-2465910;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"MASTL Facilitates Mitotic Progression";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER016571-PA|Name=BGER016571-PA 1 Reactome: R-HSA-203641 "NOSTRIN mediated eNOS trafficking" ID=BGER022940-PA|Name=BGER022940-PA 13 Reactome: R-HSA-381676;Reactome: R-HSA-5607763;Reactome: R-HSA-114508;Reactome: R-HSA-112043;Reactome: R-HSA-983695;Reactome: R-HSA-4086398;Reactome: R-HSA-139853;Reactome: R-HSA-2871809;Reactome: R-HSA-5578775;Reactome: R-HSA-1489509;Reactome: R-HSA-422356;Reactome: R-HSA-5218921;Reactome: R-HSA-2029485 "Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"CLEC7A (Dectin-1) induces NFAT activation";"Effects of PIP2 hydrolysis";"PLC beta mediated events";"Antigen activates B Cell Receptor (BCR) leading to generation of second messengers";"Ca2+ pathway";"Elevation of cytosolic Ca2+ levels";"FCERI mediated Ca+2 mobilization";"Ion homeostasis";"DAG and IP3 signaling";"Regulation of insulin secretion";"VEGFR2 mediated cell proliferation";"Role of phospholipids in phagocytosis" ID=BGER015718-PA|Name=BGER015718-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER016782-PA|Name=BGER016782-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER003246-PA|Name=BGER003246-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-72187;Reactome: R-HSA-73856 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination" ID=BGER017664-PA|Name=BGER017664-PA 1 Reactome: R-HSA-5666185 "RHO GTPases Activate Rhotekin and Rhophilins" ID=BGER008827-PA|Name=BGER008827-PA 6 KEGG: 00240+2.7.1.21;Reactome: R-HSA-69205;MetaCyc: PWY-7199;Reactome: R-HSA-73614;Reactome: R-HSA-8876198;KEGG: 00983+2.7.1.21 "Pyrimidine metabolism";"G1/S-Specific Transcription";"Pyrimidine deoxyribonucleosides salvage";"Pyrimidine salvage";"RAB GEFs exchange GTP for GDP on RABs";"Drug metabolism - other enzymes" ID=BGER000415-PA|Name=BGER000415-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-400253 "Transcriptional activation of mitochondrial biogenesis";"Circadian Clock" ID=BGER016136-PA|Name=BGER016136-PA 2 Reactome: R-HSA-6798695;MetaCyc: PWY-7511 "Neutrophil degranulation";"Protein ubiquitination" ID=BGER009341-PA|Name=BGER009341-PA 5 MetaCyc: PWY-7511;Reactome: R-HSA-381038;Reactome: R-HSA-5358346;Reactome: R-HSA-5362768;Reactome: R-HSA-901032 "Protein ubiquitination";"XBP1(S) activates chaperone genes";"Hedgehog ligand biogenesis";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"ER Quality Control Compartment (ERQC)" ID=BGER025191-PA|Name=BGER025191-PA 14 Reactome: R-HSA-167246;Reactome: R-HSA-6796648;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-112382;Reactome: R-HSA-167200;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-75955;Reactome: R-HSA-167158;Reactome: R-HSA-167242;Reactome: R-HSA-167238;Reactome: R-HSA-674695 "Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"Formation of RNA Pol II elongation complex";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"RNA Polymerase II Transcription Elongation";"Formation of the HIV-1 Early Elongation Complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events" ID=BGER016968-PA|Name=BGER016968-PA 2 Reactome: R-HSA-446205;Reactome: R-HSA-72731 "Synthesis of GDP-mannose";"Recycling of eIF2:GDP" ID=BGER013931-PA|Name=BGER013931-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER006171-PA|Name=BGER006171-PA 3 Reactome: R-HSA-5689603;Reactome: R-HSA-3214847;Reactome: R-HSA-5696394 "UCH proteinases";"HATs acetylate histones";"DNA Damage Recognition in GG-NER" ID=BGER009676-PA|Name=BGER009676-PA 1 Reactome: R-HSA-446210 "Synthesis of UDP-N-acetyl-glucosamine" ID=BGER010589-PA|Name=BGER010589-PA 1 Reactome: R-HSA-418886 "Netrin mediated repulsion signals" ID=BGER012481-PA|Name=BGER012481-PA 13 Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339 "Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER014148-PA|Name=BGER014148-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-5689880 "HATs acetylate histones";"Ub-specific processing proteases" ID=BGER011630-PA|Name=Cathepsin 5 Reactome: R-HSA-1442490;Reactome: R-HSA-6798695;Reactome: R-HSA-2022090;Reactome: R-HSA-1679131;Reactome: R-HSA-2132295 "Collagen degradation";"Neutrophil degranulation";"Assembly of collagen fibrils and other multimeric structures";"Trafficking and processing of endosomal TLR";"MHC class II antigen presentation" ID=BGER005110-PB|Name=BGER005110-PB 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER009823-PA|Name=BGER009823-PA 1 Reactome: R-HSA-8866654 "E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER000942-PA|Name=BGER000942-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6784531 "Major pathway of rRNA processing in the nucleolus and cytosol";"tRNA processing in the nucleus" ID=BGER018581-PA|Name=BGER018581-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER016235-PA|Name=BGER016235-PA 2 Reactome: R-HSA-1237112;KEGG: 00270+3.1.3.77 "Methionine salvage pathway";"Cysteine and methionine metabolism" ID=BGER010131-PA|Name=BGER010131-PA 9 Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-6807505;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-167161;Reactome: R-HSA-674695 "RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"HIV Transcription Initiation";"RNA Polymerase II Pre-transcription Events" ID=BGER008877-PA|Name=BGER008877-PA 2 Reactome: R-HSA-975957;Reactome: R-HSA-975956 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" ID=BGER011862-PA|Name=BGER011862-PA 4 MetaCyc: PWY-8026;Reactome: R-HSA-6807062;KEGG: 00100+1.3.1.72;Reactome: R-HSA-6807047 "Sterol biosynthesis (methylotrophs)";"Cholesterol biosynthesis via lathosterol";"Steroid biosynthesis";"Cholesterol biosynthesis via desmosterol" ID=BGER006779-PA|Name=BGER006779-PA 4 MetaCyc: PWY-7221;KEGG: 00230+6.3.5.2;Reactome: R-HSA-73817;KEGG: 00983+6.3.5.2 "Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Purine ribonucleoside monophosphate biosynthesis";"Drug metabolism - other enzymes" ID=BGER022761-PA|Name=BGER022761-PA 16 Reactome: R-HSA-174178;Reactome: R-HSA-179409;Reactome: R-HSA-2467813;Reactome: R-HSA-176409;Reactome: R-HSA-2559582;Reactome: R-HSA-176408;Reactome: R-HSA-8853884;Reactome: R-HSA-174048;Reactome: R-HSA-174084;Reactome: R-HSA-141430;Reactome: R-HSA-983168;Reactome: R-HSA-69017;Reactome: R-HSA-176412;Reactome: R-HSA-174184;Reactome: R-HSA-174154;Reactome: R-HSA-176407 "APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A";"Separation of Sister Chromatids";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Senescence-Associated Secretory Phenotype (SASP)";"Regulation of APC/C activators between G1/S and early anaphase";"Transcriptional Regulation by VENTX";"APC/C:Cdc20 mediated degradation of Cyclin B";"Autodegradation of Cdh1 by Cdh1:APC/C";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Antigen processing: Ubiquitination & Proteasome degradation";"CDK-mediated phosphorylation and removal of Cdc6";"Phosphorylation of the APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Securin";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase" ID=BGER021208-PA|Name=BGER021208-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER005541-PA|Name=BGER005541-PA 1 Reactome: R-HSA-8856828 "Clathrin-mediated endocytosis" ID=BGER022093-PA|Name=BGER022093-PA 2 Reactome: R-HSA-212676;Reactome: R-HSA-181429 "Dopamine Neurotransmitter Release Cycle";"Serotonin Neurotransmitter Release Cycle" ID=BGER023350-PA|Name=BGER023350-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER008261-PA|Name=BGER008261-PA 6 Reactome: R-HSA-212676;Reactome: R-HSA-181430;Reactome: R-HSA-210500;Reactome: R-HSA-181429;Reactome: R-HSA-388844;Reactome: R-HSA-264642 "Dopamine Neurotransmitter Release Cycle";"Norepinephrine Neurotransmitter Release Cycle";"Glutamate Neurotransmitter Release Cycle";"Serotonin Neurotransmitter Release Cycle";"Receptor-type tyrosine-protein phosphatases";"Acetylcholine Neurotransmitter Release Cycle" ID=BGER027646-PA|Name=BGER027646-PA 2 Reactome: R-HSA-936440;Reactome: R-HSA-5689896 "Negative regulators of DDX58/IFIH1 signaling";"Ovarian tumor domain proteases" ID=BGER001760-PA|Name=BGER001760-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER006563-PA|Name=BGER006563-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER017849-PA|Name=BGER017849-PA 7 MetaCyc: PWY-5686;KEGG: 00250+6.3.5.5;KEGG: 00240+6.3.5.5;MetaCyc: PWY-7400;MetaCyc: PWY-5154;MetaCyc: PWY-7791;MetaCyc: PWY-7790 "UMP biosynthesis I";"Alanine, aspartate and glutamate metabolism";"Pyrimidine metabolism";"L-arginine biosynthesis IV (archaebacteria)";"L-arginine biosynthesis III (via N-acetyl-L-citrulline)";"UMP biosynthesis III";"UMP biosynthesis II" ID=BGER018638-PA|Name=BGER018638-PA 1 KEGG: 04070+2.7.11.13 "Phosphatidylinositol signaling system" ID=BGER026897-PA|Name=BGER026897-PA 14 MetaCyc: PWY-5690;MetaCyc: PWY-7279;KEGG: 00720+1.3.5.1;MetaCyc: PWY-6728;MetaCyc: PWY-561;Reactome: R-HSA-611105;MetaCyc: PWY-7254;KEGG: 00650+1.3.5.1;MetaCyc: PWY-3781;Reactome: R-HSA-71403;KEGG: 00190+1.3.5.1;KEGG: 00020+1.3.5.1;MetaCyc: PWY-6969;MetaCyc: PWY-4302 "TCA cycle II (plants and fungi)";"Aerobic respiration II (cytochrome c) (yeast)";"Carbon fixation pathways in prokaryotes";"Methylaspartate cycle";"Superpathway of glyoxylate cycle and fatty acid degradation";"Respiratory electron transport";"TCA cycle VII (acetate-producers)";"Butanoate metabolism";"Aerobic respiration I (cytochrome c)";"Citric acid cycle (TCA cycle)";"Oxidative phosphorylation";"Citrate cycle (TCA cycle)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Aerobic respiration III (alternative oxidase pathway)" ID=BGER013294-PA|Name=BGER013294-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER023182-PA|Name=BGER023182-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER026291-PA|Name=BGER026291-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER001447-PA|Name=BGER001447-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER017888-PA|Name=BGER017888-PA 4 MetaCyc: PWY-6987;MetaCyc: PWY-7382;KEGG: 00785+2.8.1.8;Reactome: R-HSA-389661 "Lipoate biosynthesis and incorporation III (Bacillus)";"Lipoate biosynthesis and incorporation IV (yeast)";"Lipoic acid metabolism";"Glyoxylate metabolism and glycine degradation" ID=BGER028708-PA|Name=BGER028708-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER025744-PA|Name=BGER025744-PA 1 Reactome: R-HSA-390522 "Striated Muscle Contraction" ID=BGER001369-PA|Name=BGER001369-PA 1 MetaCyc: PWY-6829 "Trna methylation (yeast)" ID=BGER012683-PA|Name=BGER012683-PA 5 Reactome: R-HSA-2022928;Reactome: R-HSA-3656253;MetaCyc: PWY-6558;Reactome: R-HSA-3656237;KEGG: 00534+2.4.1.224+2.4.1.225 "HS-GAG biosynthesis";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"Heparan sulfate biosynthesis (late stages)";"Defective EXT2 causes exostoses 2";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin" ID=BGER014366-PA|Name=BGER014366-PA 7 Reactome: R-HSA-1483166;Reactome: R-HSA-1483148;KEGG: 00564+3.1.4.4;MetaCyc: PWY-7039;MetaCyc: PWY-3561;Reactome: R-HSA-2029485;KEGG: 00565+3.1.4.4 "Synthesis of PA";"Synthesis of PG";"Glycerophospholipid metabolism";"Phosphatidate metabolism, as a signaling molecule";"Choline biosynthesis III";"Role of phospholipids in phagocytosis";"Ether lipid metabolism" ID=BGER004887-PA|Name=BGER004887-PA 2 Reactome: R-HSA-425986;Reactome: R-HSA-2672351 "Sodium/Proton exchangers";"Stimuli-sensing channels" ID=BGER025630-PA|Name=BGER025630-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER008745-PA|Name=BGER008745-PA 4 KEGG: 00260+4.2.1.22;Reactome: R-HSA-1614603;MetaCyc: PWY-801;KEGG: 00270+4.2.1.22 "Glycine, serine and threonine metabolism";"Cysteine formation from homocysteine";"Homocysteine and cysteine interconversion";"Cysteine and methionine metabolism" ID=BGER005709-PA|Name=BGER005709-PA 7 Reactome: R-HSA-416476;Reactome: R-HSA-114608;Reactome: R-HSA-8957275;Reactome: R-HSA-140837;Reactome: R-HSA-418594;Reactome: R-HSA-381426;Reactome: R-HSA-375276 "G alpha (q) signalling events";"Platelet degranulation";"Post-translational protein phosphorylation";"Intrinsic Pathway of Fibrin Clot Formation";"G alpha (i) signalling events";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Peptide ligand-binding receptors" ID=BGER002792-PA|Name=BGER002792-PA 3 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-4420097 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"VEGFA-VEGFR2 Pathway" ID=BGER014342-PA|Name=BGER014342-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER021431-PA|Name=BGER021431-PA 1 Reactome: R-HSA-5649702 "APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway" ID=BGER024464-PA|Name=BGER024464-PA 6 Reactome: R-HSA-1650814;Reactome: R-HSA-3000171;Reactome: R-HSA-1442490;Reactome: R-HSA-2022090;Reactome: R-HSA-8874081;Reactome: R-HSA-8948216 "Collagen biosynthesis and modifying enzymes";"Non-integrin membrane-ECM interactions";"Collagen degradation";"Assembly of collagen fibrils and other multimeric structures";"MET activates PTK2 signaling";"Collagen chain trimerization" ID=BGER004098-PA|Name=BGER004098-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER007385-PA|Name=BGER007385-PA 5 Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-5689901;Reactome: R-HSA-5693571;Reactome: R-HSA-69473 "Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Metalloprotease DUBs";"Nonhomologous End-Joining (NHEJ)";"G2/M DNA damage checkpoint" ID=BGER008433-PA|Name=BGER008433-PA 2 Reactome: R-HSA-380270;Reactome: R-HSA-380320 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes" ID=BGER004451-PA|Name=BGER004451-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER023298-PA|Name=BGER023298-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER025743-PA|Name=BGER025743-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER006499-PA|Name=BGER006499-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection" ID=BGER017384-PA|Name=BGER017384-PA 8 KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-418889;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Caspase activation via Dependence Receptors in the absence of ligand";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER009744-PA|Name=BGER009744-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER013336-PA|Name=BGER013336-PA 1 Reactome: R-HSA-6783984 "Glycine degradation" ID=BGER024226-PA|Name=BGER024226-PA 57 Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556;Reactome: R-HSA-69601;Reactome: R-HSA-1169091;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-69481;Reactome: R-HSA-5610780 "APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Activation of NF-kappaB in B cells";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome" ID=BGER007382-PA|Name=BGER007382-PA 2 MetaCyc: PWY-7802;MetaCyc: PWY-7799 "N-end rule pathway II (prokaryotic)";"Arg/N-end rule pathway (eukaryotic)" ID=BGER024856-PA|Name=BGER024856-PA 1 Reactome: R-HSA-419771 "Opsins" ID=BGER027483-PA|Name=BGER027483-PA 2 MetaCyc: PWY-5386;KEGG: 00620+3.1.2.6 "Methylglyoxal degradation I";"Pyruvate metabolism" ID=BGER028829-PA|Name=BGER028829-PA 29 Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-76042;Reactome: R-HSA-73762;Reactome: R-HSA-674695;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-427413;Reactome: R-HSA-75955;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-113418;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-167172;Reactome: R-HSA-167158;Reactome: R-HSA-5696395;Reactome: R-HSA-77075;Reactome: R-HSA-5696400;Reactome: R-HSA-73863;Reactome: R-HSA-167162;Reactome: R-HSA-167161;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-167152;Reactome: R-HSA-73772 "mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Transcription Elongation";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of the Early Elongation Complex";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Transcription of the HIV genome";"Formation of the HIV-1 Early Elongation Complex";"Formation of Incision Complex in GG-NER";"RNA Pol II CTD phosphorylation and interaction with CE";"Dual Incision in GG-NER";"RNA Polymerase I Transcription Termination";"RNA Polymerase II HIV Promoter Escape";"HIV Transcription Initiation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape" ID=BGER004643-PA|Name=BGER004643-PA 2 Reactome: R-HSA-164843;Reactome: R-HSA-5693571 "2-LTR circle formation";"Nonhomologous End-Joining (NHEJ)" ID=BGER028744-PA|Name=BGER028744-PA 13 Reactome: R-HSA-196836;KEGG: 00983+2.5.1.18;MetaCyc: PWY-7533;KEGG: 00480+2.5.1.18+1.8.5.1;MetaCyc: PWY-6842;MetaCyc: PWY-4061;MetaCyc: PWY-6370;KEGG: 00053+1.8.5.1;KEGG: 00980+2.5.1.18;Reactome: R-HSA-156590;KEGG: 00982+2.5.1.18;MetaCyc: PWY-2261;MetaCyc: PWY-7112 "Vitamin C (ascorbate) metabolism";"Drug metabolism - other enzymes";"Gliotoxin biosynthesis";"Glutathione metabolism";"Glutathione-mediated detoxification II";"Glutathione-mediated detoxification I";"Ascorbate recycling (cytosolic)";"Ascorbate and aldarate metabolism";"Metabolism of xenobiotics by cytochrome P450";"Glutathione conjugation";"Drug metabolism - cytochrome P450";"Ascorbate glutathione cycle";"4-hydroxy-2-nonenal detoxification" ID=BGER017087-PA|Name=BGER017087-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER015764-PA|Name=BGER015764-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER022561-PA|Name=BGER022561-PA 11 Reactome: R-HSA-1660516;Reactome: R-HSA-168138;Reactome: R-HSA-1660499;KEGG: 04070+2.7.1.137;Reactome: R-HSA-1660514;Reactome: R-HSA-1632852;MetaCyc: PWY-6352;Reactome: R-HSA-109704;KEGG: 00562+2.7.1.137;Reactome: R-HSA-5668599;Reactome: R-HSA-1660517 "Synthesis of PIPs at the early endosome membrane";"Toll Like Receptor 9 (TLR9) Cascade";"Synthesis of PIPs at the plasma membrane";"Phosphatidylinositol signaling system";"Synthesis of PIPs at the Golgi membrane";"Macroautophagy";"3-phosphoinositide biosynthesis";"PI3K Cascade";"Inositol phosphate metabolism";"RHO GTPases Activate NADPH Oxidases";"Synthesis of PIPs at the late endosome membrane" ID=BGER001501-PA|Name=BGER001501-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER019564-PA|Name=BGER019564-PA 1 Reactome: R-HSA-5689896 "Ovarian tumor domain proteases" ID=BGER006252-PA|Name=BGER006252-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER011535-PA|Name=BGER011535-PA 6 Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-9010553;Reactome: R-HSA-159236;Reactome: R-HSA-975957;Reactome: R-HSA-73856 "mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Regulation of expression of SLITs and ROBOs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"RNA Polymerase II Transcription Termination" ID=BGER004322-PA|Name=BGER004322-PA 2 Reactome: R-HSA-8866907;Reactome: R-HSA-8866904 "Activation of the TFAP2 (AP-2) family of transcription factors";"Negative regulation of activity of TFAP2 (AP-2) family transcription factors" ID=BGER024651-PA|Name=BGER024651-PA 5 Reactome: R-HSA-9630221;Reactome: R-HSA-110357;Reactome: R-HSA-110329;Reactome: R-HSA-110328;Reactome: R-HSA-9630222 "Defective NTHL1 substrate processing";"Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Defective NTHL1 substrate binding" ID=BGER021326-PA|Name=BGER021326-PA 5 MetaCyc: PWY-7922;MetaCyc: PWY-7979;KEGG: 00514+2.4.1.109;MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109 "Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation III (mammals, core M3)";"Other types of O-glycan biosynthesis";"Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis" ID=BGER021020-PA|Name=BGER021020-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER024230-PA|Name=BGER024230-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008254-PA|Name=BGER008254-PA 8 Reactome: R-HSA-6803207;Reactome: R-HSA-8953750;Reactome: R-HSA-6798695;Reactome: R-HSA-111459;Reactome: R-HSA-111464;Reactome: R-HSA-111463;Reactome: R-HSA-111458;Reactome: R-HSA-9627069 "TP53 Regulates Transcription of Caspase Activators and Caspases";"Transcriptional Regulation by E2F6";"Neutrophil degranulation";"Activation of caspases through apoptosome-mediated cleavage";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"SMAC (DIABLO) binds to IAPs";"Formation of apoptosome";"Regulation of the apoptosome activity" ID=BGER024129-PA|Name=BGER024129-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER014623-PA|Name=BGER014623-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER000163-PA|Name=BGER000163-PA 1 Reactome: R-HSA-111957 "Cam-PDE 1 activation" ID=BGER000884-PA|Name=BGER000884-PA 52 Reactome: R-HSA-112382;Reactome: R-HSA-76061;Reactome: R-HSA-1834949;Reactome: R-HSA-76042;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-73762;Reactome: R-HSA-203927;Reactome: R-HSA-8851708;Reactome: R-HSA-76071;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-73780;Reactome: R-HSA-113418;Reactome: R-HSA-6782210;Reactome: R-HSA-73980;Reactome: R-HSA-6781823;Reactome: R-HSA-73776;Reactome: R-HSA-749476;Reactome: R-HSA-73779;Reactome: R-HSA-5617472;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-5578749;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-5250924;Reactome: R-HSA-72165;Reactome: R-HSA-674695;Reactome: R-HSA-72203;Reactome: R-HSA-167242;Reactome: R-HSA-427413;Reactome: R-HSA-5601884;Reactome: R-HSA-6803529;Reactome: R-HSA-167243;Reactome: R-HSA-76066;Reactome: R-HSA-167172;Reactome: R-HSA-73863;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-73772;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167161 "Formation of RNA Pol II elongation complex";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA Polymerase I Transcription Initiation";"MicroRNA (miRNA) biogenesis";"Signaling by FGFR2 IIIa TM";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Polymerase III Chain Elongation";"Formation of the Early Elongation Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase III Transcription Termination";"Formation of TC-NER Pre-Incision Complex";"RNA Polymerase II Promoter Escape";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Transcriptional regulation by small RNAs";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"B-WICH complex positively regulates rRNA expression";"mRNA Splicing - Minor Pathway";"RNA Polymerase II Pre-transcription Events";"Processing of Capped Intron-Containing Pre-mRNA";"Abortive elongation of HIV-1 transcript in the absence of Tat";"NoRC negatively regulates rRNA expression";"PIWI-interacting RNA (piRNA) biogenesis";"FGFR2 alternative splicing";"Tat-mediated HIV elongation arrest and recovery";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Transcription of the HIV genome";"RNA Polymerase I Transcription Termination";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase I Promoter Escape";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV Transcription Initiation" ID=BGER010437-PA|Name=BGER010437-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER003919-PA|Name=BGER003919-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER007314-PA|Name=BGER007314-PA 1 Reactome: R-HSA-429958 "mRNA decay by 3' to 5' exoribonuclease" ID=BGER001495-PA|Name=BGER001495-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER002904-PA|Name=BGER002904-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER006736-PA|Name=BGER006736-PA 26 Reactome: R-HSA-5626467;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-2500257;Reactome: R-HSA-389960;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-380320;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-389977;Reactome: R-HSA-190861;Reactome: R-HSA-8852276 "RHO GTPases activate IQGAPs";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Resolution of Sister Chromatid Cohesion";"Formation of tubulin folding intermediates by CCT/TriC";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"Recruitment of NuMA to mitotic centrosomes";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Post-chaperonin tubulin folding pathway";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint" ID=BGER008697-PA|Name=BGER008697-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER000251-PA|Name=BGER000251-PA 3 MetaCyc: PWY-1269;KEGG: 00540+2.7.7.38;Reactome: R-HSA-4085001 "CMP-3-deoxy-D-manno-octulosonate biosynthesis";"Lipopolysaccharide biosynthesis";"Sialic acid metabolism" ID=BGER012172-PA|Name=BGER012172-PA 2 Reactome: R-HSA-3299685;MetaCyc: PWY-6854 "Detoxification of Reactive Oxygen Species";"Ethylene biosynthesis III (microbes)" ID=BGER013553-PA|Name=BGER013553-PA 4 Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-73856;Reactome: R-HSA-77595 "mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs" ID=BGER029278-PA|Name=BGER029278-PA 2 Reactome: R-HSA-445095;Reactome: R-HSA-6807878 "Interaction between L1 and Ankyrins";"COPI-mediated anterograde transport" ID=BGER016406-PA|Name=BGER016406-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER029437-PA|Name=BGER029437-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER001043-PA|Name=BGER001043-PA 1 Reactome: R-HSA-5676934 "Protein repair" ID=BGER018433-PA|Name=BGER018433-PA 6 KEGG: 00561+2.7.1.107;KEGG: 00564+2.7.1.107;MetaCyc: PWY-7817;KEGG: 04070+2.7.1.107;Reactome: R-HSA-114508;MetaCyc: PWY-7039 "Glycerolipid metabolism";"Glycerophospholipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Phosphatidylinositol signaling system";"Effects of PIP2 hydrolysis";"Phosphatidate metabolism, as a signaling molecule" ID=BGER010961-PA|Name=BGER010961-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER009901-PA|Name=BGER009901-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER010749-PA|Name=BGER010749-PA 12 Reactome: R-HSA-8854518;Reactome: R-HSA-6811436;Reactome: R-HSA-380320;Reactome: R-HSA-381038;Reactome: R-HSA-2565942;Reactome: R-HSA-380259;Reactome: R-HSA-3371497;Reactome: R-HSA-6807878;Reactome: R-HSA-380270;Reactome: R-HSA-5620912;Reactome: R-HSA-2132295;Reactome: R-HSA-380284 "AURKA Activation by TPX2";"COPI-independent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"XBP1(S) activates chaperone genes";"Regulation of PLK1 Activity at G2/M Transition";"Loss of Nlp from mitotic centrosomes";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-mediated anterograde transport";"Recruitment of mitotic centrosome proteins and complexes";"Anchoring of the basal body to the plasma membrane";"MHC class II antigen presentation";"Loss of proteins required for interphase microtubule organization from the centrosome" ID=BGER024088-PA|Name=BGER024088-PA 1 Reactome: R-HSA-5693571 "Nonhomologous End-Joining (NHEJ)" ID=BGER004830-PA|Name=BGER004830-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER006653-PA|Name=BGER006653-PA 1 Reactome: R-HSA-1971475 "A tetrasaccharide linker sequence is required for GAG synthesis" ID=BGER028138-PA|Name=BGER028138-PA 4 MetaCyc: PWY-6823;KEGG: 00790+2.8.1.12;MetaCyc: PWY-7887;Reactome: R-HSA-947581 "Molybdenum cofactor biosynthesis";"Folate biosynthesis";"Protein SAMPylation and SAMP-mediated thiolation";"Molybdenum cofactor biosynthesis" ID=BGER024332-PA|Name=BGER024332-PA 7 Reactome: R-HSA-6798695;Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-390450;Reactome: R-HSA-6814122;Reactome: R-HSA-389960;Reactome: R-HSA-5620922 "Neutrophil degranulation";"Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Folding of actin by CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium" ID=BGER007263-PA|Name=BGER007263-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" ID=BGER011401-PA|Name=BGER011401-PA 5 Reactome: R-HSA-189085;MetaCyc: PWY-7900;MetaCyc: PWY-5067;MetaCyc: PWY-622;KEGG: 00500+2.4.1.18 "Digestion of dietary carbohydrate";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch biosynthesis";"Starch and sucrose metabolism" ID=BGER013516-PA|Name=BGER013516-PA 20 Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-5696397;Reactome: R-HSA-110312;Reactome: R-HSA-6782135;Reactome: R-HSA-5655862;Reactome: R-HSA-5651801;Reactome: R-HSA-5693607;Reactome: R-HSA-5696400;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5693616;Reactome: R-HSA-5656121;Reactome: R-HSA-5685938;Reactome: R-HSA-5656169;Reactome: R-HSA-5685942;Reactome: R-HSA-110320;Reactome: R-HSA-69091;Reactome: R-HSA-174411 "Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by REV1";"Dual incision in TC-NER";"Translesion synthesis by POLK";"PCNA-Dependent Long Patch Base Excision Repair";"Processing of DNA double-strand break ends";"Dual Incision in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Presynaptic phase of homologous DNA pairing and strand exchange";"Translesion synthesis by POLI";"HDR through Single Strand Annealing (SSA)";"Termination of translesion DNA synthesis";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH";"Polymerase switching";"Polymerase switching on the C-strand of the telomere" ID=BGER026450-PA|Name=BGER026450-PA 1 Reactome: R-HSA-6804756 "Regulation of TP53 Activity through Phosphorylation" ID=BGER022405-PA|Name=BGER022405-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER000495-PA|Name=BGER000495-PA 5 Reactome: R-HSA-2132295;Reactome: R-HSA-1660662;Reactome: R-HSA-4341670;Reactome: R-HSA-4085001;Reactome: R-HSA-6798695 "MHC class II antigen presentation";"Glycosphingolipid metabolism";"Defective NEU1 causes sialidosis";"Sialic acid metabolism";"Neutrophil degranulation" ID=BGER028527-PA|Name=BGER028527-PA 4 Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-381771;Reactome: R-HSA-400511 "Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)";"Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)" ID=BGER007371-PA|Name=BGER007371-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER009704-PA|Name=BGER009704-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER027190-PA|Name=BGER027190-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER021919-PA|Name=BGER021919-PA 4 Reactome: R-HSA-5674400;Reactome: R-HSA-198693;Reactome: R-HSA-9614399;Reactome: R-HSA-9615017 "Constitutive Signaling by AKT1 E17K in Cancer";"AKT phosphorylates targets in the nucleus";"Regulation of localization of FOXO transcription factors";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes" ID=BGER003392-PA|Name=BGER003392-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764 "Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination" ID=BGER008891-PA|Name=BGER008891-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER008291-PA|Name=BGER008291-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER009618-PA|Name=BGER009618-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER011571-PA|Name=BGER011571-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER027458-PA|Name=BGER027458-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER015219-PA|Name=BGER015219-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER018050-PA|Name=BGER018050-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER022018-PA|Name=BGER022018-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER014603-PA|Name=BGER014603-PA 6 Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-6784531;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-8951664 "RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"tRNA processing in the nucleus";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Neddylation" ID=BGER013322-PA|Name=BGER013322-PA 2 Reactome: R-HSA-171319;Reactome: R-HSA-3214847 "Telomere Extension By Telomerase";"HATs acetylate histones" ID=BGER028884-PA|Name=BGER028884-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER018538-PA|Name=BGER018538-PA 11 Reactome: R-HSA-8943724;Reactome: R-HSA-450341;Reactome: R-HSA-2559580;Reactome: R-HSA-5687128;Reactome: R-HSA-6796648;Reactome: R-HSA-1912408;Reactome: R-HSA-9018519;Reactome: R-HSA-2559582;Reactome: R-HSA-8862803;Reactome: R-HSA-5617472;Reactome: R-HSA-2871796 "Regulation of PTEN gene transcription";"Activation of the AP-1 family of transcription factors";"Oxidative Stress Induced Senescence";"MAPK6/MAPK4 signaling";"TP53 Regulates Transcription of DNA Repair Genes";"Pre-NOTCH Transcription and Translation";"Estrogen-dependent gene expression";"Senescence-Associated Secretory Phenotype (SASP)";"Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"FCERI mediated MAPK activation" ID=BGER017157-PA|Name=BGER017157-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER004653-PA|Name=BGER004653-PA 4 KEGG: 05235+3.1.3.16;Reactome: R-HSA-6807505;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"RNA polymerase II transcribes snRNA genes";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" ID=BGER015634-PA|Name=BGER015634-PA 2 Reactome: R-HSA-201722;Reactome: R-HSA-171319 "Formation of the beta-catenin:TCF transactivating complex";"Telomere Extension By Telomerase" ID=BGER018956-PA|Name=BGER018956-PA 13 Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits" ID=BGER007129-PA|Name=BGER007129-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER003891-PA|Name=BGER003891-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" ID=BGER017568-PA|Name=BGER017568-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-389661 "Peroxisomal protein import";"Glyoxylate metabolism and glycine degradation" ID=BGER021905-PA|Name=BGER021905-PA 3 Reactome: R-HSA-5678520;Reactome: R-HSA-159418;Reactome: R-HSA-193368 "Defective ABCB11 causes progressive familial intrahepatic cholestasis 2 and benign recurrent intrahepatic cholestasis 2";"Recycling of bile acids and salts";"Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol" ID=BGER015548-PA|Name=BGER015548-PA 2 Reactome: R-HSA-167826;Reactome: R-HSA-167827 "The fatty acid cycling model";"The proton buffering model" ID=BGER016608-PA|Name=BGER016608-PA 1 Reactome: R-HSA-211945 "Phase I - Functionalization of compounds" ID=BGER005487-PA|Name=BGER005487-PA 4 Reactome: R-HSA-2132295;Reactome: R-HSA-3371497;Reactome: R-HSA-6811436;Reactome: R-HSA-6807878 "MHC class II antigen presentation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-independent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER007674-PA|Name=BGER007674-PA 1 Reactome: R-HSA-1614517 "Sulfide oxidation to sulfate" ID=BGER008622-PA|Name=BGER008622-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER023422-PA|Name=BGER023422-PA 2 Reactome: R-HSA-8964038;Reactome: R-HSA-6798695 "LDL clearance";"Neutrophil degranulation" ID=BGER016020-PA|Name=BGER016020-PA 17 Reactome: R-HSA-8853884;Reactome: R-HSA-176408;Reactome: R-HSA-2559582;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-174178;Reactome: R-HSA-179409;Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-176412;Reactome: R-HSA-174184;Reactome: R-HSA-69017;Reactome: R-HSA-983168;Reactome: R-HSA-141430;Reactome: R-HSA-174084;Reactome: R-HSA-8951664;Reactome: R-HSA-174048 "Transcriptional Regulation by VENTX";"Regulation of APC/C activators between G1/S and early anaphase";"Senescence-Associated Secretory Phenotype (SASP)";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Phosphorylation of the APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"CDK-mediated phosphorylation and removal of Cdc6";"Antigen processing: Ubiquitination & Proteasome degradation";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Autodegradation of Cdh1 by Cdh1:APC/C";"Neddylation";"APC/C:Cdc20 mediated degradation of Cyclin B" ID=BGER017890-PA|Name=BGER017890-PA 4 MetaCyc: PWY-7382;MetaCyc: PWY-6987;Reactome: R-HSA-389661;KEGG: 00785+2.8.1.8 "Lipoate biosynthesis and incorporation IV (yeast)";"Lipoate biosynthesis and incorporation III (Bacillus)";"Glyoxylate metabolism and glycine degradation";"Lipoic acid metabolism" ID=BGER005649-PA|Name=BGER005649-PA 18 Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-166208;Reactome: R-HSA-72702;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-6790901;Reactome: R-HSA-72689 "Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"mTORC1-mediated signalling";"Ribosomal scanning and start codon recognition";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"rRNA modification in the nucleus and cytosol";"Formation of a pool of free 40S subunits" ID=BGER003539-PA|Name=BGER003539-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" ID=BGER007642-PA|Name=BGER007642-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-389661 "Peroxisomal protein import";"Glyoxylate metabolism and glycine degradation" ID=BGER023689-PA|Name=BGER023689-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER000908-PA|Name=BGER000908-PA 3 Reactome: R-HSA-392154;KEGG: 00230+4.6.1.2;Reactome: R-HSA-445355 "Nitric oxide stimulates guanylate cyclase";"Purine metabolism";"Smooth Muscle Contraction" ID=BGER029011-PA|Name=BGER029011-PA 2 Reactome: R-HSA-445355;Reactome: R-HSA-390522 "Smooth Muscle Contraction";"Striated Muscle Contraction" ID=BGER010480-PA|Name=BGER010480-PA 2 Reactome: R-HSA-5689896;Reactome: R-HSA-5689880 "Ovarian tumor domain proteases";"Ub-specific processing proteases" ID=BGER008257-PA|Name=BGER008257-PA 5 MetaCyc: PWY-4361;KEGG: 00270+4.2.1.109;Reactome: R-HSA-111458;Reactome: R-HSA-1237112;Reactome: R-HSA-9627069 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Cysteine and methionine metabolism";"Formation of apoptosome";"Methionine salvage pathway";"Regulation of the apoptosome activity" ID=BGER007538-PA|Name=BGER007538-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" ID=BGER026260-PA|Name=BGER026260-PA 1 Reactome: R-HSA-1614517 "Sulfide oxidation to sulfate" ID=BGER001249-PA|Name=BGER001249-PA 1 Reactome: R-HSA-201451 "Signaling by BMP" ID=BGER028461-PA|Name=BGER028461-PA 6 MetaCyc: PWY-7920;Reactome: R-HSA-975578;KEGG: 00510+2.4.1.143;KEGG: 00513+2.4.1.143;MetaCyc: PWY-7426;Reactome: R-HSA-4793952 "Complex N-linked glycan biosynthesis (plants)";"Reactions specific to the complex N-glycan synthesis pathway";"N-Glycan biosynthesis";"Various types of N-glycan biosynthesis";"Complex N-linked glycan biosynthesis (vertebrates)";"Defective MGAT2 causes MGAT2-CDG (CDG-2a)" ID=BGER026754-PA|Name=BGER026754-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER015213-PA|Name=BGER015213-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER006711-PA|Name=BGER006711-PA 33 Reactome: R-HSA-159231;Reactome: R-HSA-5663220;Reactome: R-HSA-168325;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-141444;Reactome: R-HSA-9610379;Reactome: R-HSA-168276;Reactome: R-HSA-9648025;Reactome: R-HSA-4085377;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-5578749;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-180910;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-2500257;Reactome: R-HSA-1169408;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-3301854;Reactome: R-HSA-165054;Reactome: R-HSA-159236 "Transport of Mature mRNA Derived from an Intronless Transcript";"RHO GTPases Activate Formins";"Viral Messenger RNA Synthesis";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"HCMV Late Events";"NS1 Mediated Effects on Host Pathways";"EML4 and NUDC in mitotic spindle formation";"SUMOylation of SUMOylation proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"Transcriptional regulation by small RNAs";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Resolution of Sister Chromatid Cohesion";"ISG15 antiviral mechanism";"SUMOylation of DNA replication proteins";"HCMV Early Events";"Nuclear Pore Complex (NPC) Disassembly";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER015365-PA|Name=BGER015365-PA 7 Reactome: R-HSA-8854214;Reactome: R-HSA-380972;Reactome: R-HSA-165181;Reactome: R-HSA-198323;Reactome: R-HSA-1632852;Reactome: R-HSA-5674400;Reactome: R-HSA-5628897 "TBC/RABGAPs";"Energy dependent regulation of mTOR by LKB1-AMPK";"Inhibition of TSC complex formation by PKB";"AKT phosphorylates targets in the cytosol";"Macroautophagy";"Constitutive Signaling by AKT1 E17K in Cancer";"TP53 Regulates Metabolic Genes" ID=BGER026856-PA|Name=BGER026856-PA 14 KEGG: 00561+3.1.3.4;Reactome: R-HSA-1483213;MetaCyc: PWY-8051;MetaCyc: PWY-7782;Reactome: R-HSA-4419969;MetaCyc: PWY-8053;KEGG: 00600+3.1.3.4;MetaCyc: PWY-6453;Reactome: R-HSA-75109;MetaCyc: PWY-8052;Reactome: R-HSA-1483191;MetaCyc: PWY-8055;KEGG: 00565+3.1.3.4;KEGG: 00564+3.1.3.4 "Glycerolipid metabolism";"Synthesis of PE";"Anandamide biosynthesis I";"Plasmalogen biosynthesis";"Depolymerisation of the Nuclear Lamina";"Anandamide biosynthesis II";"Sphingolipid metabolism";"Stigma estolide biosynthesis";"Triglyceride biosynthesis";"2-arachidonoylglycerol biosynthesis";"Synthesis of PC";"Palmitoyl ethanolamide biosynthesis";"Ether lipid metabolism";"Glycerophospholipid metabolism" ID=BGER021430-PA|Name=BGER021430-PA 2 Reactome: R-HSA-4641262;Reactome: R-HSA-196299 "Disassembly of the destruction complex and recruitment of AXIN to the membrane";"Beta-catenin phosphorylation cascade" ID=BGER027130-PA|Name=BGER027130-PA 3 Reactome: R-HSA-379716;Reactome: R-HSA-2408522;KEGG: 00970+6.1.1.5 "Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism";"Aminoacyl-tRNA biosynthesis" ID=BGER024782-PA|Name=BGER024782-PA 2 KEGG: 00770+2.7.1.24;MetaCyc: PWY-7851 "Pantothenate and CoA biosynthesis";"Coenzyme A biosynthesis II (eukaryotic)" ID=BGER010520-PA|Name=BGER010520-PA 5 Reactome: R-HSA-2132295;Reactome: R-HSA-1660662;Reactome: R-HSA-4341670;Reactome: R-HSA-4085001;Reactome: R-HSA-6798695 "MHC class II antigen presentation";"Glycosphingolipid metabolism";"Defective NEU1 causes sialidosis";"Sialic acid metabolism";"Neutrophil degranulation" ID=BGER003169-PA|Name=BGER003169-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER025991-PA|Name=BGER025991-PA 4 Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-1222556;Reactome: R-HSA-77387 "Transferrin endocytosis and recycling";"Ion channel transport";"ROS and RNS production in phagocytes";"Insulin receptor recycling" ID=BGER008733-PA|Name=BGER008733-PA 2 Reactome: R-HSA-8853659;Reactome: R-HSA-5673001 "RET signaling";"RAF/MAP kinase cascade" ID=BGER004269-PA|Name=BGER004269-PA 2 KEGG: 00230+4.6.1.1;Reactome: R-HSA-196819 "Purine metabolism";"Vitamin B1 (thiamin) metabolism" ID=BGER011706-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER028529-PA|Name=BGER028529-PA 13 Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339 "Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER026966-PA|Name=BGER026966-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER017448-PA|Name=BGER017448-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-6814122 "G alpha (i) signalling events";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding" ID=BGER002979-PA|Name=BGER002979-PA 3 Reactome: R-HSA-75105;MetaCyc: PWY-5996;MetaCyc: PWY-5987 "Fatty acyl-CoA biosynthesis";"Oleate biosynthesis II (animals and fungi)";"Sorgoleone biosynthesis" ID=BGER022627-PA|Name=BGER022627-PA 1 Reactome: R-HSA-2514859 "Inactivation, recovery and regulation of the phototransduction cascade" ID=BGER000011-PA|Name=BGER000011-PA 4 Reactome: R-HSA-2672351;Reactome: R-HSA-379716;Reactome: R-HSA-2408522;KEGG: 00970+6.1.1.20 "Stimuli-sensing channels";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism";"Aminoacyl-tRNA biosynthesis" ID=BGER011237-PA|Name=BGER011237-PA 5 Reactome: R-HSA-9029558;Reactome: R-HSA-75105;Reactome: R-HSA-163765;Reactome: R-HSA-2426168;Reactome: R-HSA-199220 "NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis";"ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)";"Vitamin B5 (pantothenate) metabolism" ID=BGER014639-PA|Name=BGER014639-PA 15 Reactome: R-HSA-5687128;Reactome: R-HSA-9022692;Reactome: R-HSA-5628897;Reactome: R-HSA-2559585;Reactome: R-HSA-8934593;Reactome: R-HSA-2559580;Reactome: R-HSA-8853884;Reactome: R-HSA-8936459;Reactome: R-HSA-8986944;Reactome: R-HSA-8943723;Reactome: R-HSA-9029569;Reactome: R-HSA-9018519;Reactome: R-HSA-8948700;Reactome: R-HSA-1912408;Reactome: R-HSA-4086398 "MAPK6/MAPK4 signaling";"Regulation of MECP2 expression and activity";"TP53 Regulates Metabolic Genes";"Oncogene Induced Senescence";"Regulation of RUNX1 Expression and Activity";"Oxidative Stress Induced Senescence";"Transcriptional Regulation by VENTX";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Transcriptional Regulation by MECP2";"Regulation of PTEN mRNA translation";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Estrogen-dependent gene expression";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"Pre-NOTCH Transcription and Translation";"Ca2+ pathway" ID=BGER003808-PA|Name=BGER003808-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER005515-PA|Name=BGER005515-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER025652-PA|Name=BGER025652-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER029877-PA|Name=BGER029877-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER018921-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER004977-PA|Name=BGER004977-PA 6 Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450604;Reactome: R-HSA-429958;Reactome: R-HSA-6791226 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER008785-PA|Name=BGER008785-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER005981-PA|Name=BGER005981-PA 1 Reactome: R-HSA-110362 "POLB-Dependent Long Patch Base Excision Repair" ID=BGER027788-PA|Name=BGER027788-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER005880-PA|Name=BGER005880-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER002308-PA|Name=BGER002308-PA 9 KEGG: 00020+6.4.1.1;MetaCyc: PWY-8086;Reactome: R-HSA-3371599;Reactome: R-HSA-70263;KEGG: 00720+6.4.1.1;MetaCyc: PWY-6142;Reactome: R-HSA-196780;MetaCyc: PWY-6146;KEGG: 00620+6.4.1.1 "Citrate cycle (TCA cycle)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Defective HLCS causes multiple carboxylase deficiency";"Gluconeogenesis";"Carbon fixation pathways in prokaryotes";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Biotin transport and metabolism";"Methanobacterium thermoautotrophicum biosynthetic metabolism";"Pyruvate metabolism" ID=BGER016269-PA|Name=BGER016269-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER002219-PA|Name=BGER002219-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER008004-PA|Name=BGER008004-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER018773-PA|Name=BGER018773-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER007392-PA|Name=BGER007392-PA 3 Reactome: R-HSA-418594;Reactome: R-HSA-375276;Reactome: R-HSA-416476 "G alpha (i) signalling events";"Peptide ligand-binding receptors";"G alpha (q) signalling events" ID=BGER013794-PA|Name=BGER013794-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER013994-PA|Name=BGER013994-PA 1 Reactome: R-HSA-2022928 "HS-GAG biosynthesis" ID=BGER000554-PA|Name=BGER000554-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" ID=BGER005366-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER001634-PA|Name=BGER001634-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-5693568 "Fanconi Anemia Pathway";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER019524-PA|Name=BGER019524-PA 12 Reactome: R-HSA-167246;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-167243;Reactome: R-HSA-167200;Reactome: R-HSA-75955;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-6804756;Reactome: R-HSA-167238;Reactome: R-HSA-674695 "Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"Tat-mediated HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Transcription Elongation";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"Regulation of TP53 Activity through Phosphorylation";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events" ID=BGER017460-PA|Name=BGER017460-PA 1 Reactome: R-HSA-196757 "Metabolism of folate and pterines" ID=BGER013055-PA|Name=BGER013055-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER007778-PA|Name=BGER007778-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER021265-PA|Name=BGER021265-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" ID=BGER023633-PA|Name=BGER023633-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER011911-PA|Name=BGER011911-PA 1 Reactome: R-HSA-430039 "mRNA decay by 5' to 3' exoribonuclease" ID=BGER005738-PA|Name=BGER005738-PA 8 Reactome: R-HSA-69183;Reactome: R-HSA-174430;Reactome: R-HSA-68962;Reactome: R-HSA-113501;Reactome: R-HSA-68952;Reactome: R-HSA-69091;Reactome: R-HSA-69166;Reactome: R-HSA-174411 "Processive synthesis on the lagging strand";"Telomere C-strand synthesis initiation";"Activation of the pre-replicative complex";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"DNA replication initiation";"Polymerase switching";"Removal of the Flap Intermediate";"Polymerase switching on the C-strand of the telomere" ID=BGER002352-PA|Name=BGER002352-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" ID=BGER002733-PA|Name=BGER002733-PA 6 Reactome: R-HSA-6798695;Reactome: R-HSA-9615017;Reactome: R-HSA-3299685;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6;KEGG: 00630+1.11.1.6 "Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Detoxification of Reactive Oxygen Species";"Peroxisomal protein import";"Tryptophan metabolism";"Glyoxylate and dicarboxylate metabolism" ID=BGER023825-PA|Name=BGER023825-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER026179-PA|Name=BGER026179-PA 5 Reactome: R-HSA-199220;Reactome: R-HSA-163765;Reactome: R-HSA-2426168;Reactome: R-HSA-75105;Reactome: R-HSA-9029558 "Vitamin B5 (pantothenate) metabolism";"ChREBP activates metabolic gene expression";"Activation of gene expression by SREBF (SREBP)";"Fatty acyl-CoA biosynthesis";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis" ID=BGER029252-PA|Name=BGER029252-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER007365-PA|Name=BGER007365-PA 2 Reactome: R-HSA-2173788;Reactome: R-HSA-5689603 "Downregulation of TGF-beta receptor signaling";"UCH proteinases" ID=BGER006769-PA|Name=BGER006769-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER018629-PA|Name=BGER018629-PA 3 MetaCyc: PWY-7942;KEGG: 00480+4.3.2.7;Reactome: R-HSA-174403 "5-oxo-L-proline metabolism";"Glutathione metabolism";"Glutathione synthesis and recycling" ID=BGER011502-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER004309-PA|Name=BGER004309-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER006476-PA|Name=BGER006476-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER001443-PA|Name=BGER001443-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER024206-PA|Name=BGER024206-PA 2 Reactome: R-HSA-6787450;Reactome: R-HSA-6782315 "tRNA modification in the mitochondrion";"tRNA modification in the nucleus and cytosol" ID=BGER019139-PA|Name=BGER019139-PA 6 Reactome: R-HSA-77588;Reactome: R-HSA-111367;Reactome: R-HSA-191859;Reactome: R-HSA-72163;Reactome: R-HSA-73856;Reactome: R-HSA-72165 "SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"SLBP independent Processing of Histone Pre-mRNAs";"snRNP Assembly";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Minor Pathway" ID=BGER017994-PA|Name=BGER017994-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis" ID=BGER008023-PA|Name=BGER008023-PA 1 Reactome: R-HSA-1614558 "Degradation of cysteine and homocysteine" ID=BGER002968-PA|Name=BGER002968-PA 3 MetaCyc: PWY-5996;Reactome: R-HSA-75105;MetaCyc: PWY-5987 "Oleate biosynthesis II (animals and fungi)";"Fatty acyl-CoA biosynthesis";"Sorgoleone biosynthesis" ID=BGER012446-PA|Name=BGER012446-PA 56 Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-382556;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-69601;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5658442;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5610783 "Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Ub-specific processing proteases";"Degradation of DVL";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ABC-family proteins mediated transport";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of RAS by GAPs";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Separation of Sister Chromatids";"Degradation of AXIN";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Degradation of GLI2 by the proteasome" ID=BGER024359-PA|Name=BGER024359-PA 5 Reactome: R-HSA-2426168;Reactome: R-HSA-9614657;Reactome: R-HSA-381183;Reactome: R-HSA-1989781;Reactome: R-HSA-380994 "Activation of gene expression by SREBF (SREBP)";"FOXO-mediated transcription of cell death genes";"ATF6 (ATF6-alpha) activates chaperone genes";"PPARA activates gene expression";"ATF4 activates genes in response to endoplasmic reticulum stress" ID=BGER002501-PA|Name=BGER002501-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER020802-PA|Name=BGER020802-PA 9 Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68689;Reactome: R-HSA-1362277;Reactome: R-HSA-68827;Reactome: R-HSA-69017;Reactome: R-HSA-68949;Reactome: R-HSA-69205;Reactome: R-HSA-68867 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"CDC6 association with the ORC:origin complex";"Transcription of E2F targets under negative control by DREAM complex";"CDT1 association with the CDC6:ORC:origin complex";"CDK-mediated phosphorylation and removal of Cdc6";"Orc1 removal from chromatin";"G1/S-Specific Transcription";"Assembly of the pre-replicative complex" ID=BGER012080-PA|Name=BGER012080-PA 18 Reactome: R-HSA-1482922;Reactome: R-HSA-1482925;Reactome: R-HSA-1483166;MetaCyc: PWY-7783;KEGG: 00565+3.1.1.4;MetaCyc: PWY-7409;KEGG: 00592+3.1.1.4;MetaCyc: PWY-7417;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;KEGG: 00591+3.1.1.4;Reactome: R-HSA-1482839;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482801;MetaCyc: PWY-8051;Reactome: R-HSA-1482788;MetaCyc: PWY-7416;MetaCyc: PWY-8053 "Acyl chain remodelling of PI";"Acyl chain remodelling of PG";"Synthesis of PA";"Plasmalogen degradation";"Ether lipid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"alpha-Linolenic acid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Linoleic acid metabolism";"Acyl chain remodelling of PE";"Arachidonic acid metabolism";"Acyl chain remodelling of PS";"Anandamide biosynthesis I";"Acyl chain remodelling of PC";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Anandamide biosynthesis II" ID=BGER000914-PA|Name=BGER000914-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER017943-PA|Name=BGER017943-PA 2 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER016695-PA|Name=BGER016695-PA 1 Reactome: R-HSA-112126 "ALKBH3 mediated reversal of alkylation damage" ID=BGER017212-PA|Name=BGER017212-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER017941-PA|Name=BGER017941-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" ID=BGER011867-PA|Name=BGER011867-PA 1 Reactome: R-HSA-71064 "Lysine catabolism" ID=BGER024448-PA|Name=BGER024448-PA 14 MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-5080 "Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I" ID=BGER017659-PA|Name=BGER017659-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER011729-PA|Name=BGER011729-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER020494-PA|Name=BGER020494-PA 4 KEGG: 00020+1.2.4.2;KEGG: 00310+1.2.4.2;MetaCyc: PWY-5084;KEGG: 00380+1.2.4.2 "Citrate cycle (TCA cycle)";"Lysine degradation";"2-oxoglutarate decarboxylation to succinyl-CoA";"Tryptophan metabolism" ID=BGER026040-PA|Name=BGER026040-PA 12 Reactome: R-HSA-167246;Reactome: R-HSA-167243;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-6804756 "Tat-mediated elongation of the HIV-1 transcript";"Tat-mediated HIV elongation arrest and recovery";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Regulation of TP53 Activity through Phosphorylation" ID=BGER003796-PA|Name=BGER003796-PA 2 MetaCyc: PWY-5041;KEGG: 00270+3.3.1.1 "S-adenosyl-L-methionine cycle II";"Cysteine and methionine metabolism" ID=BGER002221-PA|Name=BGER002221-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-8856828;Reactome: R-HSA-6811440;Reactome: R-HSA-8856825;Reactome: R-HSA-432722 "Neutrophil degranulation";"Clathrin-mediated endocytosis";"Retrograde transport at the Trans-Golgi-Network";"Cargo recognition for clathrin-mediated endocytosis";"Golgi Associated Vesicle Biogenesis" ID=BGER024030-PA|Name=BGER024030-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER024850-PA|Name=BGER024850-PA 9 Reactome: R-HSA-69183;Reactome: R-HSA-68962;Reactome: R-HSA-174430;Reactome: R-HSA-113501;Reactome: R-HSA-68952;Reactome: R-HSA-69091;Reactome: R-HSA-69205;Reactome: R-HSA-69166;Reactome: R-HSA-174411 "Processive synthesis on the lagging strand";"Activation of the pre-replicative complex";"Telomere C-strand synthesis initiation";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"DNA replication initiation";"Polymerase switching";"G1/S-Specific Transcription";"Removal of the Flap Intermediate";"Polymerase switching on the C-strand of the telomere" ID=BGER024246-PB|Name=BGER024246-PB 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER023205-PA|Name=BGER023205-PA 6 Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER001530-PA|Name=BGER001530-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER011062-PA|Name=BGER011062-PA 1 Reactome: R-HSA-437239 "Recycling pathway of L1" ID=BGER017726-PA|Name=BGER017726-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" ID=BGER017761-PA|Name=BGER017761-PA 6 Reactome: R-HSA-201722;Reactome: R-HSA-3769402;Reactome: R-HSA-3214841;Reactome: R-HSA-5617472;Reactome: R-HSA-8951664;Reactome: R-HSA-8936459 "Formation of the beta-catenin:TCF transactivating complex";"Deactivation of the beta-catenin transactivating complex";"PKMTs methylate histone lysines";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Neddylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function" ID=BGER027473-PA|Name=BGER027473-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER021812-PA|Name=BGER021812-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER019681-PA|Name=BGER019681-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER019773-PA|Name=BGER019773-PA 1 MetaCyc: PWY-7799 "Arg/N-end rule pathway (eukaryotic)" ID=BGER018587-PA|Name=BGER018587-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" ID=BGER017388-PA|Name=BGER017388-PA 1 Reactome: R-HSA-209968 "Thyroxine biosynthesis" ID=BGER007458-PA|Name=BGER007458-PA 1 Reactome: R-HSA-3295583 "TRP channels" ID=BGER029557-PA|Name=BGER029557-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER010092-PA|Name=BGER010092-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER004238-PA|Name=BGER004238-PA 10 KEGG: 00430+2.3.2.2;MetaCyc: PWY-5826;MetaCyc: PWY-4061;MetaCyc: PWY-4041;KEGG: 00460+2.3.2.2;MetaCyc: PWY-6842;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-8001;MetaCyc: PWY-7559;MetaCyc: PWY-7112 "Taurine and hypotaurine metabolism";"Hypoglycin biosynthesis";"Glutathione-mediated detoxification I";"Gamma-glutamyl cycle";"Cyanoamino acid metabolism";"Glutathione-mediated detoxification II";"Glutathione metabolism";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione degradation (DUG pathway";"4-hydroxy-2-nonenal detoxification" ID=BGER008784-PA|Name=BGER008784-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER009972-PA|Name=BGER009972-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER027574-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER001946-PA|Name=BGER001946-PA 7 Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-606279;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877 "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Deposition of new CENPA-containing nucleosomes at the centromere";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase" ID=BGER021060-PA|Name=BGER021060-PA 6 Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025 "RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation" ID=BGER023988-PA|Name=BGER023988-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER001795-PA|Name=BGER001795-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER020615-PA|Name=BGER020615-PA 12 Reactome: R-HSA-416476;Reactome: R-HSA-418885;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-416482;Reactome: R-HSA-194840;Reactome: R-HSA-193648;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "G alpha (q) signalling events";"DCC mediated attractive signaling";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"G alpha (12/13) signalling events";"Rho GTPase cycle";"NRAGE signals death through JNK";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER008007-PA|Name=BGER008007-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER000991-PA|Name=BGER000991-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER006390-PA|Name=BGER006390-PA 42 Reactome: R-HSA-2299718;Reactome: R-HSA-606279;Reactome: R-HSA-9610379;Reactome: R-HSA-977225;Reactome: R-HSA-3214842;Reactome: R-HSA-3214841;Reactome: R-HSA-4551638;Reactome: R-HSA-427359;Reactome: R-HSA-73772;Reactome: R-HSA-5334118;Reactome: R-HSA-5578749;Reactome: R-HSA-1221632;Reactome: R-HSA-5625886;Reactome: R-HSA-8936459;Reactome: R-HSA-2559580;Reactome: R-HSA-5250924;Reactome: R-HSA-110330;Reactome: R-HSA-3214815;Reactome: R-HSA-9616222;Reactome: R-HSA-427413;Reactome: R-HSA-8939236;Reactome: R-HSA-110329;Reactome: R-HSA-201722;Reactome: R-HSA-110328;Reactome: R-HSA-427389;Reactome: R-HSA-5617472;Reactome: R-HSA-5693607;Reactome: R-HSA-5693571;Reactome: R-HSA-1912408;Reactome: R-HSA-73728;Reactome: R-HSA-2559582;Reactome: R-HSA-912446;Reactome: R-HSA-5693565;Reactome: R-HSA-3214847;Reactome: R-HSA-2559586;Reactome: R-HSA-110331;Reactome: R-HSA-212300;Reactome: R-HSA-3214858;Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-9018519;Reactome: R-HSA-69473 "Condensation of Prophase Chromosomes";"Deposition of new CENPA-containing nucleosomes at the centromere";"HCMV Late Events";"Amyloid fiber formation";"HDMs demethylate histones";"PKMTs methylate histone lysines";"SUMOylation of chromatin organization proteins";"SIRT1 negatively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"DNA methylation";"Transcriptional regulation by small RNAs";"Meiotic synapsis";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Oxidative Stress Induced Senescence";"B-WICH complex positively regulates rRNA expression";"Recognition and association of DNA glycosylase with site containing an affected purine";"HDACs deacetylate histones";"Transcriptional regulation of granulopoiesis";"NoRC negatively regulates rRNA expression";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cleavage of the damaged pyrimidine";"Formation of the beta-catenin:TCF transactivating complex";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Processing of DNA double-strand break ends";"Nonhomologous End-Joining (NHEJ)";"Pre-NOTCH Transcription and Translation";"RNA Polymerase I Promoter Opening";"Senescence-Associated Secretory Phenotype (SASP)";"Meiotic recombination";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"HATs acetylate histones";"DNA Damage/Telomere Stress Induced Senescence";"Cleavage of the damaged purine";"PRC2 methylates histones and DNA";"RMTs methylate histone arginines";"HCMV Early Events";"Packaging Of Telomere Ends";"Estrogen-dependent gene expression";"G2/M DNA damage checkpoint" ID=BGER025500-PA|Name=BGER025500-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER005532-PA|Name=BGER005532-PA 2 Reactome: R-HSA-204174;Reactome: R-HSA-5362517 "Regulation of pyruvate dehydrogenase (PDH) complex";"Signaling by Retinoic Acid" ID=BGER029263-PA|Name=BGER029263-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER027575-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER014950-PA|Name=BGER014950-PA 6 Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450604 "ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER017252-PA|Name=BGER017252-PA 4 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-8856828;Reactome: R-HSA-3928662 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"Clathrin-mediated endocytosis";"EPHB-mediated forward signaling" ID=BGER006686-PA|Name=BGER006686-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER007687-PA|Name=BGER007687-PA 1 Reactome: R-HSA-3232118 "SUMOylation of transcription factors" ID=BGER011444-PA|Name=BGER011444-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER009956-PA|Name=BGER009956-PA 4 Reactome: R-HSA-1442490;Reactome: R-HSA-1650814;Reactome: R-HSA-8948216;Reactome: R-HSA-2022090 "Collagen degradation";"Collagen biosynthesis and modifying enzymes";"Collagen chain trimerization";"Assembly of collagen fibrils and other multimeric structures" ID=BGER016141-PB|Name=BGER016141-PB 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026126-PA|Name=BGER026126-PA 2 MetaCyc: PWY-6502;Reactome: R-HSA-2393930 "8-oxo-(d)GTP detoxification I";"Phosphate bond hydrolysis by NUDT proteins" ID=BGER006900-PA|Name=BGER006900-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-9639288;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling";"Ion channel transport";"Insulin receptor recycling" ID=BGER020602-PA|Name=BGER020602-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-3299685;Reactome: R-HSA-5668599;Reactome: R-HSA-1236973;Reactome: R-HSA-4420097 "ROS and RNS production in phagocytes";"Detoxification of Reactive Oxygen Species";"RHO GTPases Activate NADPH Oxidases";"Cross-presentation of particulate exogenous antigens (phagosomes)";"VEGFA-VEGFR2 Pathway" ID=BGER008645-PA|Name=BGER008645-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER024331-PA|Name=BGER024331-PA 23 Reactome: R-HSA-6814122;Reactome: R-HSA-500657;Reactome: R-HSA-418555;Reactome: R-HSA-392851;Reactome: R-HSA-381676;Reactome: R-HSA-456926;Reactome: R-HSA-416476;Reactome: R-HSA-9009391;Reactome: R-HSA-418597;Reactome: R-HSA-8964616;Reactome: R-HSA-418594;Reactome: R-HSA-4086398;Reactome: R-HSA-432040;Reactome: R-HSA-392170;Reactome: R-HSA-8964315;Reactome: R-HSA-400042;Reactome: R-HSA-392451;Reactome: R-HSA-428930;Reactome: R-HSA-420092;Reactome: R-HSA-202040;Reactome: R-HSA-418217;Reactome: R-HSA-418592;Reactome: R-HSA-416482 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Presynaptic function of Kainate receptors";"G alpha (s) signalling events";"Prostacyclin signalling through prostacyclin receptor";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"Thrombin signalling through proteinase activated receptors (PARs)";"G alpha (q) signalling events";"Extra-nuclear estrogen signaling";"G alpha (z) signalling events";"G beta:gamma signalling through CDC42";"G alpha (i) signalling events";"Ca2+ pathway";"Vasopressin regulates renal water homeostasis via Aquaporins";"ADP signalling through P2Y purinoceptor 12";"G beta:gamma signalling through BTK";"Adrenaline,noradrenaline inhibits insulin secretion";"G beta:gamma signalling through PI3Kgamma";"Thromboxane signalling through TP receptor";"Glucagon-type ligand receptors";"G-protein activation";"G beta:gamma signalling through PLC beta";"ADP signalling through P2Y purinoceptor 1";"G alpha (12/13) signalling events" ID=BGER017806-PA|Name=BGER017806-PA 10 MetaCyc: PWY-7328;KEGG: 00052+5.1.3.2;MetaCyc: PWY-3821;MetaCyc: PWY-6317;KEGG: 00520+5.1.3.2;MetaCyc: PWY-7344;MetaCyc: PWY-6397;Reactome: R-HSA-70370;MetaCyc: PWY-6527;Reactome: R-HSA-5609977 "Superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis";"Galactose metabolism";"D-galactose detoxification";"D-galactose degradation I (Leloir pathway)";"Amino sugar and nucleotide sugar metabolism";"UDP-alpha-D-galactose biosynthesis";"Mycolyl-arabinogalactan-peptidoglycan complex biosynthesis";"Galactose catabolism";"Stachyose degradation";"Defective GALE can cause Epimerase-deficiency galactosemia (EDG)" ID=BGER016623-PA|Name=BGER016623-PA 3 KEGG: 00230+2.7.6.1;Reactome: R-HSA-73843;KEGG: 00030+2.7.6.1 "Purine metabolism";"5-Phosphoribose 1-diphosphate biosynthesis";"Pentose phosphate pathway" ID=BGER021199-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER002773-PA|Name=BGER002773-PA 7 KEGG: 04070+3.1.4.11;MetaCyc: PWY-8052;MetaCyc: PWY-6351;Reactome: R-HSA-1855204;MetaCyc: PWY-7039;KEGG: 00562+3.1.4.11;MetaCyc: PWY-6367 "Phosphatidylinositol signaling system";"2-arachidonoylglycerol biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"Phosphatidate metabolism, as a signaling molecule";"Inositol phosphate metabolism";"D-myo-inositol-5-phosphate metabolism" ID=BGER007690-PA|Name=BGER007690-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER021029-PA|Name=BGER021029-PA 1 Reactome: R-HSA-5617833 "Cilium Assembly" ID=BGER025039-PA|Name=BGER025039-PA 4 Reactome: R-HSA-71240;Reactome: R-HSA-5660862;Reactome: R-HSA-210991;Reactome: R-HSA-352230 "Tryptophan catabolism";"Defective SLC7A7 causes lysinuric protein intolerance (LPI)";"Basigin interactions";"Amino acid transport across the plasma membrane" ID=BGER012822-PA|Name=BGER012822-PA 13 Reactome: R-HSA-1257604;Reactome: R-HSA-5674400;Reactome: R-HSA-3371571;Reactome: R-HSA-380972;Reactome: R-HSA-5628897;Reactome: R-HSA-1632852;Reactome: R-HSA-166208;Reactome: R-HSA-389357;Reactome: R-HSA-6804757;Reactome: R-HSA-9639288;Reactome: R-HSA-5218920;Reactome: R-HSA-8943724;Reactome: R-HSA-165159 "PIP3 activates AKT signaling";"Constitutive Signaling by AKT1 E17K in Cancer";"HSF1-dependent transactivation";"Energy dependent regulation of mTOR by LKB1-AMPK";"TP53 Regulates Metabolic Genes";"Macroautophagy";"mTORC1-mediated signalling";"CD28 dependent PI3K/Akt signaling";"Regulation of TP53 Degradation";"Amino acids regulate mTORC1";"VEGFR2 mediated vascular permeability";"Regulation of PTEN gene transcription";"mTOR signalling" ID=BGER018174-PA|Name=BGER018174-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER022737-PA|Name=BGER022737-PA 8 KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-2028269;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Signaling by Hippo";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER005506-PA|Name=BGER005506-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017;Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6 "Glyoxylate and dicarboxylate metabolism";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Tryptophan metabolism" ID=BGER002334-PA|Name=BGER002334-PA 27 Reactome: R-HSA-170822;Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-168276;Reactome: R-HSA-168271;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-159230 "Regulation of Glucokinase by Glucokinase Regulatory Protein";"Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"NS1 Mediated Effects on Host Pathways";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA" ID=BGER017952-PA|Name=BGER017952-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER023414-PA|Name=BGER023414-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER000944-PA|Name=BGER000944-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER009487-PA|Name=BGER009487-PA 3 Reactome: R-HSA-947581;KEGG: 00790+2.10.1.1;MetaCyc: PWY-6823 "Molybdenum cofactor biosynthesis";"Folate biosynthesis";"Molybdenum cofactor biosynthesis" ID=BGER025100-PA|Name=BGER025100-PA 2 Reactome: R-HSA-379716;KEGG: 00970+6.1.1.20 "Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" ID=BGER010223-PA|Name=BGER010223-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER006346-PA|Name=BGER006346-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER011514-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER005509-PA|Name=BGER005509-PA 5 Reactome: R-HSA-427389;Reactome: R-HSA-6804758;Reactome: R-HSA-3214815;Reactome: R-HSA-8943724;Reactome: R-HSA-73762 "ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Regulation of TP53 Activity through Acetylation";"HDACs deacetylate histones";"Regulation of PTEN gene transcription";"RNA Polymerase I Transcription Initiation" ID=BGER011544-PA|Name=BGER011544-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER020806-PA|Name=BGER020806-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER008010-PA|Name=BGER008010-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER009572-PA|Name=BGER009572-PA 1 Reactome: R-HSA-9022692 "Regulation of MECP2 expression and activity" ID=BGER027249-PA|Name=BGER027249-PA 11 KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-1834949;KEGG: 04714+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-3270619;KEGG: 05170+2.7.11.1;Reactome: R-HSA-5693571;KEGG: 05165+2.7.11.1;Reactome: R-HSA-8866654;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"mTOR signaling pathway";"Cytosolic sensors of pathogen-associated DNA";"Thermogenesis";"PI3K-Akt signaling pathway";"IRF3-mediated induction of type I IFN";"Human immunodeficiency virus 1 infection";"Nonhomologous End-Joining (NHEJ)";"Human papillomavirus infection";"E3 ubiquitin ligases ubiquitinate target proteins";"Human cytomegalovirus infection" ID=BGER013936-PA|Name=BGER013936-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" ID=BGER023189-PA|Name=BGER023189-PA 1 Reactome: R-HSA-6804754 "Regulation of TP53 Expression" ID=BGER010682-PA|Name=BGER010682-PA 7 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER002688-PA|Name=BGER002688-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" ID=BGER019804-PA|Name=BGER019804-PA 1 KEGG: 00970+6.1.1.20 "Aminoacyl-tRNA biosynthesis" ID=BGER009821-PA|Name=BGER009821-PA 3 Reactome: R-HSA-6798695;Reactome: R-HSA-6807004;Reactome: R-HSA-202427 "Neutrophil degranulation";"Negative regulation of MET activity";"Phosphorylation of CD3 and TCR zeta chains" ID=BGER013801-PA|Name=BGER013801-PA 4 Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-159236 "RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER001516-PA|Name=BGER001516-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER008359-PA|Name=BGER008359-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" ID=BGER004827-PA|Name=BGER004827-PA 1 Reactome: R-HSA-1221632 "Meiotic synapsis" ID=BGER023447-PA|Name=BGER023447-PA 5 Reactome: R-HSA-5610780;Reactome: R-HSA-5610787;Reactome: R-HSA-5610783;Reactome: R-HSA-5632684;Reactome: R-HSA-5610785 "Degradation of GLI1 by the proteasome";"Hedgehog 'off' state";"Degradation of GLI2 by the proteasome";"Hedgehog 'on' state";"GLI3 is processed to GLI3R by the proteasome" ID=BGER013407-PA|Name=BGER013407-PA 10 KEGG: 00900+2.3.3.10;Reactome: R-HSA-1989781;MetaCyc: PWY-7391;KEGG: 00072+2.3.3.10;MetaCyc: PWY-7571;MetaCyc: PWY-922;KEGG: 00280+2.3.3.10;MetaCyc: PWY-6174;KEGG: 00650+2.3.3.10;MetaCyc: PWY-7524 "Terpenoid backbone biosynthesis";"PPARA activates gene expression";"Isoprene biosynthesis II (engineered)";"Synthesis and degradation of ketone bodies";"Ferrichrome A biosynthesis";"Mevalonate pathway I";"Valine, leucine and isoleucine degradation";"Mevalonate pathway II (archaea)";"Butanoate metabolism";"Mevalonate pathway III (archaea)" ID=BGER022875-PA|Name=BGER022875-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER003881-PA|Name=BGER003881-PA 6 KEGG: 00030+3.1.1.17;MetaCyc: PWY-2221;KEGG: 00930+3.1.1.17;KEGG: 00053+3.1.1.17;MetaCyc: PWY-7165;MetaCyc: PWY-5530 "Pentose phosphate pathway";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Caprolactam degradation";"Ascorbate and aldarate metabolism";"L-ascorbate biosynthesis VI (engineered pathway)";"Sorbitol biosynthesis II" ID=BGER004843-PA|Name=BGER004843-PA 7 Reactome: R-HSA-8950505;Reactome: R-HSA-6814122;Reactome: R-HSA-390450;Reactome: R-HSA-390471;Reactome: R-HSA-389957;Reactome: R-HSA-389960;Reactome: R-HSA-5620922 "Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Folding of actin by CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Prefoldin mediated transfer of substrate to CCT/TriC";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium" ID=BGER015679-PA|Name=BGER015679-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" ID=BGER018489-PA|Name=BGER018489-PA 2 Reactome: R-HSA-114608;KEGG: 00970+6.1.1.3 "Platelet degranulation";"Aminoacyl-tRNA biosynthesis" ID=BGER003229-PA|Name=BGER003229-PA 5 Reactome: R-HSA-165159;Reactome: R-HSA-3371571;Reactome: R-HSA-198323;Reactome: R-HSA-166208;Reactome: R-HSA-5674400 "mTOR signalling";"HSF1-dependent transactivation";"AKT phosphorylates targets in the cytosol";"mTORC1-mediated signalling";"Constitutive Signaling by AKT1 E17K in Cancer" ID=BGER010371-PA|Name=BGER010371-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" ID=BGER010846-PA|Name=BGER010846-PA 5 Reactome: R-HSA-9615710;Reactome: R-HSA-162588;Reactome: R-HSA-9610379;Reactome: R-HSA-174490;Reactome: R-HSA-917729 "Late endosomal microautophagy";"Budding and maturation of HIV virion";"HCMV Late Events";"Membrane binding and targetting of GAG proteins";"Endosomal Sorting Complex Required For Transport (ESCRT)" ID=BGER019525-PA|Name=BGER019525-PA 12 Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-6804756;Reactome: R-HSA-167246;Reactome: R-HSA-167243;Reactome: R-HSA-112382;Reactome: R-HSA-6796648 "HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Regulation of TP53 Activity through Phosphorylation";"Tat-mediated elongation of the HIV-1 transcript";"Tat-mediated HIV elongation arrest and recovery";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes" ID=BGER022119-PA|Name=BGER022119-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER005572-PA|Name=BGER005572-PA 1 Reactome: R-HSA-73621 "Pyrimidine catabolism" ID=BGER000921-PA|Name=BGER000921-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER013920-PA|Name=BGER013920-PA 2 Reactome: R-HSA-446203;Reactome: R-HSA-1799339 "Asparagine N-linked glycosylation";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER024304-PA|Name=BGER024304-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER014251-PA|Name=BGER014251-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-9033500 "Peroxisomal protein import";"TYSND1 cleaves peroxisomal proteins" ID=BGER012478-PA|Name=BGER012478-PA 7 Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-166208;Reactome: R-HSA-72702;Reactome: R-HSA-72662;Reactome: R-HSA-429947;Reactome: R-HSA-156827 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"mTORC1-mediated signalling";"Ribosomal scanning and start codon recognition";"Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S";"Deadenylation of mRNA";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER003915-PA|Name=BGER003915-PA 2 Reactome: R-HSA-8951671;Reactome: R-HSA-2032785 "RUNX3 regulates YAP1-mediated transcription";"YAP1- and WWTR1 (TAZ)-stimulated gene expression" ID=BGER023353-PA|Name=BGER023353-PA 4 Reactome: R-HSA-936837;Reactome: R-HSA-1912420;Reactome: R-HSA-418359;Reactome: R-HSA-5578775 "Ion transport by P-type ATPases";"Pre-NOTCH Processing in Golgi";"Reduction of cytosolic Ca++ levels";"Ion homeostasis" ID=BGER009833-PA|Name=BGER009833-PA 5 Reactome: R-HSA-6811434;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878;Reactome: R-HSA-204005;Reactome: R-HSA-6811438 "COPI-dependent Golgi-to-ER retrograde traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport";"COPII-mediated vesicle transport";"Intra-Golgi traffic" ID=BGER020828-PA|Name=BGER020828-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" ID=BGER001008-PA|Name=BGER001008-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878 "Intra-Golgi traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport" ID=BGER005353-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER014063-PA|Name=BGER014063-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis" ID=BGER008735-PA|Name=BGER008735-PA 2 Reactome: R-HSA-5673001;Reactome: R-HSA-8853659 "RAF/MAP kinase cascade";"RET signaling" ID=BGER016572-PA|Name=BGER016572-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins" ID=BGER007535-PA|Name=BGER007535-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER028755-PA|Name=BGER028755-PA 3 Reactome: R-HSA-72165;Reactome: R-HSA-5250924;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression";"mRNA Splicing - Major Pathway" ID=BGER019273-PA|Name=BGER019273-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER002770-PA|Name=BGER002770-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER014134-PA|Name=BGER014134-PA 1 KEGG: 00970+6.3.5.7 "Aminoacyl-tRNA biosynthesis" ID=BGER009709-PA|Name=BGER009709-PA 2 Reactome: R-HSA-69231;Reactome: R-HSA-8934593 "Cyclin D associated events in G1";"Regulation of RUNX1 Expression and Activity" ID=BGER021845-PA|Name=BGER021845-PA 2 Reactome: R-HSA-5694530;Reactome: R-HSA-204005 "Cargo concentration in the ER";"COPII-mediated vesicle transport" ID=BGER001401-PA|Name=BGER001401-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER028760-PA|Name=BGER028760-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026106-PA|Name=BGER026106-PA 5 Reactome: R-HSA-1660662;Reactome: R-HSA-2132295;Reactome: R-HSA-4341670;Reactome: R-HSA-6798695;Reactome: R-HSA-4085001 "Glycosphingolipid metabolism";"MHC class II antigen presentation";"Defective NEU1 causes sialidosis";"Neutrophil degranulation";"Sialic acid metabolism" ID=BGER011094-PA|Name=BGER011094-PA 56 Reactome: R-HSA-382556;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-69601;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-5658442;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-350562;Reactome: R-HSA-8939902 "ABC-family proteins mediated transport";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Activation of NF-kappaB in B cells";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RAS by GAPs";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity" ID=BGER027827-PA|Name=BGER027827-PA 16 Reactome: R-HSA-167243;Reactome: R-HSA-9010553;Reactome: R-HSA-167238;Reactome: R-HSA-167200;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-6796648;Reactome: R-HSA-1234176;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-180585;Reactome: R-HSA-8951664;Reactome: R-HSA-674695;Reactome: R-HSA-983168;Reactome: R-HSA-75955 "Tat-mediated HIV elongation arrest and recovery";"Regulation of expression of SLITs and ROBOs";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"TP53 Regulates Transcription of DNA Repair Genes";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"Vif-mediated degradation of APOBEC3G";"Neddylation";"RNA Polymerase II Pre-transcription Events";"Antigen processing: Ubiquitination & Proteasome degradation";"RNA Polymerase II Transcription Elongation" ID=BGER026053-PA|Name=BGER026053-PA 10 Reactome: R-HSA-69473;Reactome: R-HSA-6804756;Reactome: R-HSA-5693579;Reactome: R-HSA-5693607;Reactome: R-HSA-5693554;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5685942;Reactome: R-HSA-912446;Reactome: R-HSA-5693568 "G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation";"Homologous DNA Pairing and Strand Exchange";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Homologous Recombination (HRR)";"Meiotic recombination";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER018150-PA|Name=BGER018150-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" ID=BGER007632-PA|Name=BGER007632-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER007298-PA|Name=BGER007298-PA 14 Reactome: R-HSA-112382;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-6796648;Reactome: R-HSA-167246;Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167242;Reactome: R-HSA-75955;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167200 "Formation of RNA Pol II elongation complex";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Transcription Elongation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat" ID=BGER005759-PA|Name=BGER005759-PA 1 Reactome: R-HSA-376172 "DSCAM interactions" ID=BGER006929-PA|Name=BGER006929-PA 19 Reactome: R-HSA-5687128;Reactome: R-HSA-2029482;Reactome: R-HSA-5627123;Reactome: R-HSA-5625970;Reactome: R-HSA-389359;Reactome: R-HSA-5663220;Reactome: R-HSA-525793;Reactome: R-HSA-428543;Reactome: R-HSA-5626467;Reactome: R-HSA-3928662;Reactome: R-HSA-182971;Reactome: R-HSA-8964616;Reactome: R-HSA-194840;Reactome: R-HSA-418885;Reactome: R-HSA-8950505;Reactome: R-HSA-114604;Reactome: R-HSA-5663213;Reactome: R-HSA-4420097;Reactome: R-HSA-983231 "MAPK6/MAPK4 signaling";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases activate PAKs";"RHO GTPases activate KTN1";"CD28 dependent Vav1 pathway";"RHO GTPases Activate Formins";"Myogenesis";"Inactivation of CDC42 and RAC1";"RHO GTPases activate IQGAPs";"EPHB-mediated forward signaling";"EGFR downregulation";"G beta:gamma signalling through CDC42";"Rho GTPase cycle";"DCC mediated attractive signaling";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"GPVI-mediated activation cascade";"RHO GTPases Activate WASPs and WAVEs";"VEGFA-VEGFR2 Pathway";"Factors involved in megakaryocyte development and platelet production" ID=BGER016945-PA|Name=BGER016945-PA 5 Reactome: R-HSA-917729;Reactome: R-HSA-174490;Reactome: R-HSA-9610379;Reactome: R-HSA-162588;Reactome: R-HSA-9615710 "Endosomal Sorting Complex Required For Transport (ESCRT)";"Membrane binding and targetting of GAG proteins";"HCMV Late Events";"Budding and maturation of HIV virion";"Late endosomal microautophagy" ID=BGER007799-PA|Name=BGER007799-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" ID=BGER011703-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER011130-PA|Name=BGER011130-PA 2 KEGG: 00073+2.3.1.20;KEGG: 00561+2.3.1.20 "Cutin, suberine and wax biosynthesis";"Glycerolipid metabolism" ID=BGER013355-PA|Name=BGER013355-PA 11 Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-75955;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-167200;Reactome: R-HSA-112382;Reactome: R-HSA-167243;Reactome: R-HSA-6796648;Reactome: R-HSA-167246 "RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Transcription Elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of RNA Pol II elongation complex";"Tat-mediated HIV elongation arrest and recovery";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated elongation of the HIV-1 transcript" ID=BGER007052-PA|Name=BGER007052-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026184-PA|Name=BGER026184-PA 3 Reactome: R-HSA-5358493;MetaCyc: PWY-7546;MetaCyc: PWY-6482 "Synthesis of diphthamide-EEF2";"Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)" ID=BGER007783-PA|Name=BGER007783-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" ID=BGER004716-PA|Name=BGER004716-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER015133-PA|Name=BGER015133-PA 5 Reactome: R-HSA-5334118;Reactome: R-HSA-427413;Reactome: R-HSA-212300;Reactome: R-HSA-4655427;KEGG: 00270+2.1.1.37 "DNA methylation";"NoRC negatively regulates rRNA expression";"PRC2 methylates histones and DNA";"SUMOylation of DNA methylation proteins";"Cysteine and methionine metabolism" ID=BGER014720-PA|Name=BGER014720-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER023448-PA|Name=BGER023448-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER012664-PA|Name=BGER012664-PA 3 KEGG: 00790+3.4.19.9;Reactome: R-HSA-6798695;MetaCyc: PWY-2161B "Folate biosynthesis";"Neutrophil degranulation";"Glutamate removal from folates" ID=BGER005370-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER002193-PA|Name=BGER002193-PA 3 Reactome: R-HSA-2022854;Reactome: R-HSA-5083627;Reactome: R-HSA-5173105 "Keratan sulfate biosynthesis";"Defective LARGE causes MDDGA6 and MDDGB6";"O-linked glycosylation" ID=BGER005467-PA|Name=BGER005467-PA 1 Reactome: R-HSA-5693568 "Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER003462-PA|Name=BGER003462-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER004214-PA|Name=BGER004214-PA 2 KEGG: 00760+6.3.1.5;Reactome: R-HSA-196807 "Nicotinate and nicotinamide metabolism";"Nicotinate metabolism" ID=BGER027232-PA|Name=BGER027232-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER017685-PA|Name=BGER017685-PA 3 Reactome: R-HSA-1660662;Reactome: R-HSA-193681;Reactome: R-HSA-5626978 "Glycosphingolipid metabolism";"Ceramide signalling";"TNFR1-mediated ceramide production" ID=BGER018900-PA|Name=BGER018900-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER011456-PA|Name=BGER011456-PA 3 MetaCyc: PWY-7942;KEGG: 00480+4.3.2.7;Reactome: R-HSA-174403 "5-oxo-L-proline metabolism";"Glutathione metabolism";"Glutathione synthesis and recycling" ID=BGER009123-PA|Name=BGER009123-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER027265-PA|Name=BGER027265-PA 6 Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-6798695;Reactome: R-HSA-1222556 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"Ion channel transport";"Amino acids regulate mTORC1";"Neutrophil degranulation";"ROS and RNS production in phagocytes" ID=BGER002121-PA|Name=BGER002121-PA 4 Reactome: R-HSA-6811436;Reactome: R-HSA-6807878;Reactome: R-HSA-2132295;Reactome: R-HSA-3371497 "COPI-independent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport";"MHC class II antigen presentation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)" ID=BGER025097-PB|Name=BGER025097-PB 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Glycosphingolipid metabolism" ID=BGER005315-PA|Name=BGER005315-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-72187;Reactome: R-HSA-73856 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination" ID=BGER024167-PA|Name=BGER024167-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER017527-PA|Name=BGER017527-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER003593-PA|Name=BGER003593-PA 26 Reactome: R-HSA-8955332;Reactome: R-HSA-9648025;Reactome: R-HSA-389960;Reactome: R-HSA-2500257;Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-5626467;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-389977;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-380320;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295 "Carboxyterminal post-translational modifications of tubulin";"EML4 and NUDC in mitotic spindle formation";"Formation of tubulin folding intermediates by CCT/TriC";"Resolution of Sister Chromatid Cohesion";"Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"RHO GTPases activate IQGAPs";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Post-chaperonin tubulin folding pathway";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"COPI-mediated anterograde transport";"HCMV Early Events";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation" ID=BGER013155-PA|Name=BGER013155-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER005996-PA|Name=BGER005996-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER012203-PA|Name=BGER012203-PA 5 Reactome: R-HSA-5693554;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5693616;Reactome: R-HSA-5693579 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Homologous DNA Pairing and Strand Exchange" ID=BGER004552-PA|Name=BGER004552-PA 3 MetaCyc: PWY-5129;Reactome: R-HSA-1660661;KEGG: 00600+1.14.19.17 "Sphingolipid biosynthesis (plants)";"Sphingolipid de novo biosynthesis";"Sphingolipid metabolism" ID=BGER024925-PA|Name=BGER024925-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" ID=BGER009644-PA|Name=BGER009644-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER010033-PA|Name=BGER010033-PA 1 Reactome: R-HSA-5676934 "Protein repair" ID=BGER011230-PA|Name=BGER011230-PA 5 Reactome: R-HSA-9029558;Reactome: R-HSA-75105;Reactome: R-HSA-2426168;Reactome: R-HSA-163765;Reactome: R-HSA-199220 "NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis";"Activation of gene expression by SREBF (SREBP)";"ChREBP activates metabolic gene expression";"Vitamin B5 (pantothenate) metabolism" ID=BGER006770-PA|Name=BGER006770-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER018094-PA|Name=BGER018094-PA 7 Reactome: R-HSA-749476;Reactome: R-HSA-73780;Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-73980;Reactome: R-HSA-76066;Reactome: R-HSA-76061 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Chain Elongation";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER016223-PA|Name=BGER016223-PA 3 Reactome: R-HSA-4090294;Reactome: R-HSA-3899300;Reactome: R-HSA-3232118 "SUMOylation of intracellular receptors";"SUMOylation of transcription cofactors";"SUMOylation of transcription factors" ID=BGER015706-PA|Name=BGER015706-PA 1 Reactome: R-HSA-9603798 "Class I peroxisomal membrane protein import" ID=BGER001604-PA|Name=BGER001604-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" ID=BGER024297-PA|Name=BGER024297-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" ID=BGER013613-PA|Name=BGER013613-PA 6 Reactome: R-HSA-6798695;Reactome: R-HSA-975634;Reactome: R-HSA-3000171;Reactome: R-HSA-977225;Reactome: R-HSA-2453902;Reactome: R-HSA-2453864 "Neutrophil degranulation";"Retinoid metabolism and transport";"Non-integrin membrane-ECM interactions";"Amyloid fiber formation";"The canonical retinoid cycle in rods (twilight vision)";"Retinoid cycle disease events" ID=BGER008210-PA|Name=BGER008210-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER002718-PA|Name=BGER002718-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER011018-PA|Name=BGER011018-PA 7 Reactome: R-HSA-5658034;Reactome: R-HSA-5635838;Reactome: R-HSA-5362798;Reactome: R-HSA-5632684;Reactome: R-HSA-5632681;Reactome: R-HSA-5358346;Reactome: R-HSA-373080 "HHAT G278V abrogates palmitoylation of Hh-Np";"Activation of SMO";"Release of Hh-Np from the secreting cell";"Hedgehog 'on' state";"Ligand-receptor interactions";"Hedgehog ligand biogenesis";"Class B/2 (Secretin family receptors)" ID=BGER028282-PA|Name=BGER028282-PA 8 Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-6804757;Reactome: R-HSA-6782135;Reactome: R-HSA-8866652;Reactome: R-HSA-8948747;Reactome: R-HSA-6781827;Reactome: R-HSA-5689880 "Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Regulation of TP53 Degradation";"Dual incision in TC-NER";"Synthesis of active ubiquitin: roles of E1 and E2 enzymes";"Regulation of PTEN localization";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Ub-specific processing proteases" ID=BGER003818-PA|Name=BGER003818-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-171319 "rRNA modification in the nucleus and cytosol";"Telomere Extension By Telomerase" ID=BGER020416-PA|Name=BGER020416-PA 2 Reactome: R-HSA-418457;Reactome: R-HSA-4086398 "cGMP effects";"Ca2+ pathway" ID=BGER027783-PA|Name=BGER027783-PA 8 KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-6791226;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"Thermogenesis";"Relaxin signaling pathway";"Major pathway of rRNA processing in the nucleolus and cytosol";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER013610-PA|Name=BGER013610-PA 3 Reactome: R-HSA-212676;Reactome: R-HSA-6794361;Reactome: R-HSA-9609736 "Dopamine Neurotransmitter Release Cycle";"Neurexins and neuroligins";"Assembly and cell surface presentation of NMDA receptors" ID=BGER022253-PA|Name=BGER022253-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER025224-PA|Name=BGER025224-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER006621-PA|Name=BGER006621-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER028992-PA|Name=BGER028992-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER020596-PA|Name=BGER020596-PA 14 MetaCyc: PWY-7035;MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7619;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725 "(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Juniperonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)" ID=BGER009012-PA|Name=BGER009012-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER017942-PA|Name=BGER017942-PA 2 Reactome: R-HSA-382556;Reactome: R-HSA-5678895 "ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis" ID=BGER027073-PA|Name=BGER027073-PA 6 Reactome: R-HSA-8951664;Reactome: R-HSA-5696400;Reactome: R-HSA-5696395;Reactome: R-HSA-6796648;Reactome: R-HSA-5689880;Reactome: R-HSA-5696394 "Neddylation";"Dual Incision in GG-NER";"Formation of Incision Complex in GG-NER";"TP53 Regulates Transcription of DNA Repair Genes";"Ub-specific processing proteases";"DNA Damage Recognition in GG-NER" ID=BGER026237-PA|Name=BGER026237-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER025219-PA|Name=BGER025219-PA 6 MetaCyc: PWY-7234;MetaCyc: PWY-6123;MetaCyc: PWY-6124;KEGG: 00230+4.1.1.21;KEGG: 00230+6.3.2.6;Reactome: R-HSA-73817 "Inosine-5'-phosphate biosynthesis III";"Inosine-5'-phosphate biosynthesis I";"Inosine-5'-phosphate biosynthesis II";"Purine metabolism";"Purine metabolism";"Purine ribonucleoside monophosphate biosynthesis" ID=BGER020411-PA|Name=BGER020411-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER027174-PA|Name=BGER027174-PA 2 Reactome: R-HSA-9610379;Reactome: R-HSA-917729 "HCMV Late Events";"Endosomal Sorting Complex Required For Transport (ESCRT)" ID=BGER015555-PA|Name=BGER015555-PA 2 KEGG: 00051+2.7.1.105+3.1.3.46;Reactome: R-HSA-9634600 "Fructose and mannose metabolism";"Regulation of glycolysis by fructose 2,6-bisphosphate metabolism" ID=BGER005113-PA|Name=BGER005113-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-8866654 "Peroxisomal protein import";"E3 ubiquitin ligases ubiquitinate target proteins" ID=BGER015066-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER003036-PA|Name=BGER003036-PA 1 Reactome: R-HSA-5223345 "Miscellaneous transport and binding events" ID=BGER004533-PA|Name=BGER004533-PA 14 MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601 "Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" ID=BGER013236-PA|Name=BGER013236-PA 8 Reactome: R-HSA-68689;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68867;Reactome: R-HSA-68616;Reactome: R-HSA-68827;Reactome: R-HSA-113507;Reactome: R-HSA-68949 "CDC6 association with the ORC:origin complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Assembly of the pre-replicative complex";"Assembly of the ORC complex at the origin of replication";"CDT1 association with the CDC6:ORC:origin complex";"E2F-enabled inhibition of pre-replication complex formation";"Orc1 removal from chromatin" ID=BGER029928-PA|Name=BGER029928-PA 3 MetaCyc: PWY-5067;KEGG: 00500+2.4.1.11;Reactome: R-HSA-3322077 "Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism";"Glycogen synthesis" ID=BGER016440-PA|Name=BGER016440-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER023433-PA|Name=BGER023433-PA 10 MetaCyc: PWY-6554;Reactome: R-HSA-1855167;Reactome: R-HSA-983231;KEGG: 00562+2.7.1.134+2.7.1.159;MetaCyc: PWY-6362;KEGG: 04070+2.7.1.159;MetaCyc: PWY-6365;Reactome: R-HSA-1855204;MetaCyc: PWY-4661;MetaCyc: PWY-6366 "1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)";"Synthesis of pyrophosphates in the cytosol";"Factors involved in megakaryocyte development and platelet production";"Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)";"Phosphatidylinositol signaling system";"D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)";"D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis" ID=BGER002592-PA|Name=BGER002592-PA 3 Reactome: R-HSA-1483191;Reactome: R-HSA-422085;Reactome: R-HSA-112311 "Synthesis of PC";"Synthesis, secretion, and deacylation of Ghrelin";"Neurotransmitter clearance" ID=BGER005357-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER016908-PA|Name=BGER016908-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "VEGFA-VEGFR2 Pathway";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER021741-PA|Name=BGER021741-PA 3 Reactome: R-HSA-420029;KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Tight junction interactions";"Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" ID=BGER010824-PA|Name=BGER010824-PA 2 Reactome: R-HSA-382556;Reactome: R-HSA-114608 "ABC-family proteins mediated transport";"Platelet degranulation" ID=BGER020578-PA|Name=BGER020578-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" ID=BGER012768-PA|Name=BGER012768-PA 11 KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-1834949;KEGG: 04150+2.7.11.1;Reactome: R-HSA-5693571;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;Reactome: R-HSA-8866654;KEGG: 04151+2.7.11.1;Reactome: R-HSA-3270619;KEGG: 05170+2.7.11.1 "Relaxin signaling pathway";"Thermogenesis";"Cytosolic sensors of pathogen-associated DNA";"mTOR signaling pathway";"Nonhomologous End-Joining (NHEJ)";"Human cytomegalovirus infection";"Human papillomavirus infection";"E3 ubiquitin ligases ubiquitinate target proteins";"PI3K-Akt signaling pathway";"IRF3-mediated induction of type I IFN";"Human immunodeficiency virus 1 infection" ID=BGER014165-PA|Name=BGER014165-PA 2 Reactome: R-HSA-4090294;Reactome: R-HSA-383280 "SUMOylation of intracellular receptors";"Nuclear Receptor transcription pathway" ID=BGER024123-PA|Name=BGER024123-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER007784-PA|Name=BGER007784-PA 5 KEGG: 00020+1.2.4.2;MetaCyc: PWY-5084;Reactome: R-HSA-389661;KEGG: 00380+1.2.4.2;KEGG: 00310+1.2.4.2 "Citrate cycle (TCA cycle)";"2-oxoglutarate decarboxylation to succinyl-CoA";"Glyoxylate metabolism and glycine degradation";"Tryptophan metabolism";"Lysine degradation" ID=BGER012449-PA|Name=BGER012449-PA 1 Reactome: R-HSA-71288 "Creatine metabolism" ID=BGER023426-PA|Name=BGER023426-PA 13 Reactome: R-HSA-2022857;KEGG: 00511+3.2.1.52;KEGG: 00603+3.2.1.52;Reactome: R-HSA-2024101;KEGG: 00531+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;Reactome: R-HSA-2160916;MetaCyc: PWY-6902;Reactome: R-HSA-1660662;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822;KEGG: 00513+3.2.1.52 "Keratan sulfate degradation";"Other glycan degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"CS/DS degradation";"Glycosaminoglycan degradation";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Hyaluronan uptake and degradation";"Chitin degradation II (Vibrio)";"Glycosphingolipid metabolism";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)";"Various types of N-glycan biosynthesis" ID=BGER027134-PA|Name=BGER027134-PA 6 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68949;Reactome: R-HSA-69052 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin";"Switching of origins to a post-replicative state" ID=BGER018743-PA|Name=BGER018743-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER021171-PA|Name=BGER021171-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" ID=BGER006174-PA|Name=BGER006174-PA 1 Reactome: R-HSA-5223345 "Miscellaneous transport and binding events" ID=BGER003993-PA|Name=BGER003993-PA 1 Reactome: R-HSA-525793 "Myogenesis" ID=BGER008872-PA|Name=BGER008872-PA 8 Reactome: R-HSA-4615885;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-165054;Reactome: R-HSA-141444 "SUMOylation of DNA replication proteins";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"Rev-mediated nuclear export of HIV RNA";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" ID=BGER019324-PA|Name=BGER019324-PA 2 Reactome: R-HSA-446199;KEGG: 00510+3.6.1.43 "Synthesis of Dolichyl-phosphate";"N-Glycan biosynthesis" ID=BGER001428-PA|Name=BGER001428-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER016222-PA|Name=BGER016222-PA 3 Reactome: R-HSA-3232118;Reactome: R-HSA-4090294;Reactome: R-HSA-3899300 "SUMOylation of transcription factors";"SUMOylation of intracellular receptors";"SUMOylation of transcription cofactors" ID=BGER005129-PA|Name=BGER005129-PA 3 Reactome: R-HSA-6787450;Reactome: R-HSA-8868766;Reactome: R-HSA-6785470 "tRNA modification in the mitochondrion";"rRNA processing in the mitochondrion";"tRNA processing in the mitochondrion" ID=BGER016349-PA|Name=BGER016349-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER028846-PA|Name=BGER028846-PA 13 Reactome: R-HSA-1855204;KEGG: 04070+3.1.4.11;Reactome: R-HSA-9027277;MetaCyc: PWY-6367;MetaCyc: PWY-6351;Reactome: R-HSA-2871796;MetaCyc: PWY-7039;Reactome: R-HSA-2029485;MetaCyc: PWY-8052;Reactome: R-HSA-202433;Reactome: R-HSA-2424491;KEGG: 00562+3.1.4.11;Reactome: R-HSA-2871809 "Synthesis of IP3 and IP4 in the cytosol";"Phosphatidylinositol signaling system";"Erythropoietin activates Phospholipase C gamma (PLCG)";"D-myo-inositol-5-phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"FCERI mediated MAPK activation";"Phosphatidate metabolism, as a signaling molecule";"Role of phospholipids in phagocytosis";"2-arachidonoylglycerol biosynthesis";"Generation of second messenger molecules";"DAP12 signaling";"Inositol phosphate metabolism";"FCERI mediated Ca+2 mobilization" ID=BGER007838-PA|Name=BGER007838-PA 10 Reactome: R-HSA-917729;Reactome: R-HSA-9635644;Reactome: R-HSA-5689880;Reactome: R-HSA-8875360;Reactome: R-HSA-432720;Reactome: R-HSA-182971;Reactome: R-HSA-8856825;Reactome: R-HSA-8856828;Reactome: R-HSA-6807004;Reactome: R-HSA-9636383 "Endosomal Sorting Complex Required For Transport (ESCRT)";"Inhibition of membrane repair";"Ub-specific processing proteases";"InlB-mediated entry of Listeria monocytogenes into host cell";"Lysosome Vesicle Biogenesis";"EGFR downregulation";"Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis";"Negative regulation of MET activity";"Prevention of phagosomal-lysosomal fusion" ID=BGER028362-PA|Name=BGER028362-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-6798695 "Glycosphingolipid metabolism";"Neutrophil degranulation" ID=BGER007661-PA|Name=BGER007661-PA 1 Reactome: R-HSA-5617472 "Activation of anterior HOX genes in hindbrain development during early embryogenesis" ID=BGER025584-PA|Name=BGER025584-PA 5 Reactome: R-HSA-8963693;Reactome: R-HSA-9648895;Reactome: R-HSA-9633012;Reactome: R-HSA-380994;KEGG: 00250+6.3.5.4 "Aspartate and asparagine metabolism";"Response of EIF2AK1 (HRI) to heme deficiency";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"ATF4 activates genes in response to endoplasmic reticulum stress";"Alanine, aspartate and glutamate metabolism" ID=BGER020363-PA|Name=BGER020363-PA 2 Reactome: R-HSA-3295583;Reactome: R-HSA-418890 "TRP channels";"Role of second messengers in netrin-1 signaling" ID=BGER016550-PA|Name=BGER016550-PA 27 Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-168276;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-9609690;Reactome: R-HSA-3371453;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-170822;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-3301854 "tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"NS1 Mediated Effects on Host Pathways";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"HCMV Early Events";"Regulation of HSF1-mediated heat shock response";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly" ID=BGER024825-PA|Name=BGER024825-PA 4 KEGG: 05235+3.1.3.16;Reactome: R-HSA-6807505;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"RNA polymerase II transcribes snRNA genes";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" ID=BGER003913-PB|Name=BGER003913-PB 4 Reactome: R-HSA-1268020;Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial protein import";"Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER000019-PA|Name=BGER000019-PA 4 KEGG: 00670+1.5.1.6;Reactome: R-HSA-196757;KEGG: 00670+2.1.2.9;KEGG: 00970+2.1.2.9 "One carbon pool by folate";"Metabolism of folate and pterines";"One carbon pool by folate";"Aminoacyl-tRNA biosynthesis" ID=BGER022474-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER007443-PC|Name=BGER007443-PC 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER027354-PA|Name=BGER027354-PA 12 KEGG: 00660+4.1.3.25;MetaCyc: PWY-7295;KEGG: 00620+2.3.3.9;MetaCyc: PWY-7294;KEGG: 00630+3.1.2.30+2.3.3.9;MetaCyc: PWY-6728;KEGG: 00720+4.1.3.25;MetaCyc: PWY-7118;MetaCyc: PWY-5749;MetaCyc: PWY-6969;MetaCyc: PWY-7854;MetaCyc: PWY-5744 "C5-Branched dibasic acid metabolism";"L-arabinose degradation IV";"Pyruvate metabolism";"D-xylose degradation IV";"Glyoxylate and dicarboxylate metabolism";"Methylaspartate cycle";"Carbon fixation pathways in prokaryotes";"Chitin degradation to ethanol";"Itaconate degradation";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"Glyoxylate assimilation" ID=BGER000339-PA|Name=BGER000339-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76066;Reactome: R-HSA-76061 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER016936-PA|Name=BGER016936-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER019499-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER018962-PA|Name=BGER018962-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER027200-PA|Name=BGER027200-PA 15 Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-2559586;Reactome: R-HSA-5685939;Reactome: R-HSA-5693565;Reactome: R-HSA-912446;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693554;Reactome: R-HSA-5693548;Reactome: R-HSA-5693579;Reactome: R-HSA-6804756;Reactome: R-HSA-5693571;Reactome: R-HSA-5693607;Reactome: R-HSA-69473 "Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"DNA Damage/Telomere Stress Induced Senescence";"HDR through MMEJ (alt-NHEJ)";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Meiotic recombination";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Sensing of DNA Double Strand Breaks";"Homologous DNA Pairing and Strand Exchange";"Regulation of TP53 Activity through Phosphorylation";"Nonhomologous End-Joining (NHEJ)";"Processing of DNA double-strand break ends";"G2/M DNA damage checkpoint" ID=BGER021352-PA|Name=BGER021352-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER012222-PA|Name=BGER012222-PA 3 Reactome: R-HSA-174403;KEGG: 00480+4.3.2.9;MetaCyc: PWY-4041 "Glutathione synthesis and recycling";"Glutathione metabolism";"Gamma-glutamyl cycle" ID=BGER005617-PA|Name=BGER005617-PA 4 Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-72163;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing" ID=BGER006715-PA|Name=BGER006715-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER005782-PA|Name=BGER005782-PA 2 Reactome: R-HSA-5250971;Reactome: R-HSA-5682910 "Toxicity of botulinum toxin type C (BoNT/C)";"LGI-ADAM interactions" ID=BGER010775-PA|Name=BGER010775-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" ID=BGER009343-PA|Name=BGER009343-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER013678-PA|Name=BGER013678-PA 7 MetaCyc: PWY-7586;Reactome: R-HSA-446205;KEGG: 00051+5.4.2.8;MetaCyc: PWY-5659;KEGG: 00520+5.4.2.8;MetaCyc: PWY-7456;MetaCyc: PWY-882 "Beta-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation";"Synthesis of GDP-mannose";"Fructose and mannose metabolism";"GDP-mannose biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Beta-(1,4)-mannan degradation";"L-ascorbate biosynthesis I (L-galactose pathway)" ID=BGER027245-PA|Name=BGER027245-PA 12 Reactome: R-HSA-167246;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-167243;Reactome: R-HSA-167200;Reactome: R-HSA-75955;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-6804756;Reactome: R-HSA-167238;Reactome: R-HSA-674695 "Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"Tat-mediated HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Transcription Elongation";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Regulation of TP53 Activity through Phosphorylation";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events" ID=BGER013484-PA|Name=BGER013484-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER003654-PA|Name=BGER003654-PA 2 Reactome: R-HSA-70171;Reactome: R-HSA-70263 "Glycolysis";"Gluconeogenesis" ID=BGER023366-PA|Name=BGER023366-PA 4 Reactome: R-HSA-5607761;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-5676590 "Dectin-1 mediated noncanonical NF-kB signaling";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling" ID=BGER019098-PA|Name=BGER019098-PA 4 MetaCyc: PWY-5041;Reactome: R-HSA-156581;KEGG: 00270+2.5.1.6;MetaCyc: PWY-5912 "S-adenosyl-L-methionine cycle II";"Methylation";"Cysteine and methionine metabolism";"2'-deoxymugineic acid phytosiderophore biosynthesis" ID=BGER016696-PA|Name=BGER016696-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER028416-PA|Name=BGER028416-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER029082-PA|Name=BGER029082-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER000796-PA|Name=BGER000796-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" ID=BGER020894-PA|Name=BGER020894-PA 4 Reactome: R-HSA-352230;Reactome: R-HSA-71240;Reactome: R-HSA-5660862;Reactome: R-HSA-210991 "Amino acid transport across the plasma membrane";"Tryptophan catabolism";"Defective SLC7A7 causes lysinuric protein intolerance (LPI)";"Basigin interactions" ID=BGER021799-PA|Name=BGER021799-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER009602-PA|Name=BGER009602-PA 2 Reactome: R-HSA-1632852;Reactome: R-HSA-1660499 "Macroautophagy";"Synthesis of PIPs at the plasma membrane" ID=BGER000738-PA|Name=BGER000738-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER003906-PA|Name=BGER003906-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER007261-PA|Name=BGER007261-PA 2 Reactome: R-HSA-1221632;Reactome: R-HSA-5601884 "Meiotic synapsis";"PIWI-interacting RNA (piRNA) biogenesis" ID=BGER020549-PA|Name=BGER020549-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-416476 "Peptide ligand-binding receptors";"G alpha (q) signalling events" ID=BGER000794-PA|Name=BGER000794-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins" ID=BGER026953-PA|Name=BGER026953-PA 7 Reactome: R-HSA-380320;Reactome: R-HSA-380270;Reactome: R-HSA-8854518;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"AURKA Activation by TPX2";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition" ID=BGER001682-PA|Name=BGER001682-PA 22 Reactome: R-HSA-5675221;Reactome: R-HSA-4641262;Reactome: R-HSA-5673000;Reactome: R-HSA-432142;Reactome: R-HSA-5358752;Reactome: R-HSA-68877;Reactome: R-HSA-195253;Reactome: R-HSA-5467337;Reactome: R-HSA-5358751;Reactome: R-HSA-5358747;Reactome: R-HSA-5358749;Reactome: R-HSA-5339716;Reactome: R-HSA-196299;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-6811558;Reactome: R-HSA-5467348;Reactome: R-HSA-5467340;Reactome: R-HSA-389513;Reactome: R-HSA-141444 "Negative regulation of MAPK pathway";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"RAF activation";"Platelet sensitization by LDL";"T41 mutants of beta-catenin aren't phosphorylated";"Mitotic Prometaphase";"Degradation of beta-catenin by the destruction complex";"APC truncation mutants have impaired AXIN binding";"S45 mutants of beta-catenin aren't phosphorylated";"S33 mutants of beta-catenin aren't phosphorylated";"S37 mutants of beta-catenin aren't phosphorylated";"Misspliced GSK3beta mutants stabilize beta-catenin";"Beta-catenin phosphorylation cascade";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Truncations of AMER1 destabilize the destruction complex";"AXIN missense mutants destabilize the destruction complex";"CTLA4 inhibitory signaling";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" ID=BGER027487-PA|Name=BGER027487-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76066;Reactome: R-HSA-76061 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" ID=BGER013617-PA|Name=BGER013617-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440 "Intra-Golgi traffic";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network" ID=BGER023213-PA|Name=BGER023213-PA 3 Reactome: R-HSA-6807878;Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" ID=BGER010072-PA|Name=BGER010072-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER024493-PA|Name=BGER024493-PA 1 Reactome: R-HSA-6811438 "Intra-Golgi traffic" ID=BGER011883-PA|Name=BGER011883-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER009036-PA|Name=BGER009036-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72689;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"Formation of a pool of free 40S subunits";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER012572-PA|Name=BGER012572-PA 6 Reactome: R-HSA-389887;Reactome: R-HSA-9033500;Reactome: R-HSA-193368;Reactome: R-HSA-9033241;Reactome: R-HSA-390247;Reactome: R-HSA-2046106 "Beta-oxidation of pristanoyl-CoA";"TYSND1 cleaves peroxisomal proteins";"Synthesis of bile acids and bile salts via 7alpha-hydroxycholesterol";"Peroxisomal protein import";"Beta-oxidation of very long chain fatty acids";"alpha-linolenic acid (ALA) metabolism" ID=BGER009960-PA|Name=BGER009960-PA 4 Reactome: R-HSA-1650814;Reactome: R-HSA-1442490;Reactome: R-HSA-2022090;Reactome: R-HSA-8948216 "Collagen biosynthesis and modifying enzymes";"Collagen degradation";"Assembly of collagen fibrils and other multimeric structures";"Collagen chain trimerization" ID=BGER014369-PA|Name=BGER014369-PA 7 KEGG: 00564+3.1.4.4;Reactome: R-HSA-1483148;Reactome: R-HSA-1483166;KEGG: 00565+3.1.4.4;Reactome: R-HSA-2029485;MetaCyc: PWY-3561;MetaCyc: PWY-7039 "Glycerophospholipid metabolism";"Synthesis of PG";"Synthesis of PA";"Ether lipid metabolism";"Role of phospholipids in phagocytosis";"Choline biosynthesis III";"Phosphatidate metabolism, as a signaling molecule" ID=BGER023913-PA|Name=BGER023913-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER027558-PA|Name=BGER027558-PA 6 KEGG: 00512+2.4.1.122;MetaCyc: PWY-7290;Reactome: R-HSA-5083632;KEGG: 00514+2.4.1.122;Reactome: R-HSA-913709;MetaCyc: PWY-7433 "Mucin type O-glycan biosynthesis";"Escherichia coli serotype O86 O-antigen biosynthesis";"Defective C1GALT1C1 causes Tn polyagglutination syndrome (TNPS)";"Other types of O-glycan biosynthesis";"O-linked glycosylation of mucins";"Mucin core 1 and core 2 O-glycosylation" ID=BGER005574-PA|Name=BGER005574-PA 4 Reactome: R-HSA-432720;Reactome: R-HSA-6811440;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Lysosome Vesicle Biogenesis";"Retrograde transport at the Trans-Golgi-Network";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" ID=BGER011117-PA|Name=BGER011117-PA 19 KEGG: 00020+1.1.1.37;KEGG: 00630+1.1.1.37;KEGG: 00680+1.1.1.37;KEGG: 00270+1.1.1.37;MetaCyc: PWY-6728;MetaCyc: PWY-7383;MetaCyc: PWY-5913;Reactome: R-HSA-70263;Reactome: R-HSA-71403;KEGG: 00710+1.1.1.37;MetaCyc: PWY-8086;MetaCyc: PWY-7115;MetaCyc: PWY-5690;KEGG: 00720+1.1.1.37;MetaCyc: PWY-561;KEGG: 00620+1.1.1.37;MetaCyc: PWY-1622;MetaCyc: PWY-6969;MetaCyc: PWY-5392 "Citrate cycle (TCA cycle)";"Glyoxylate and dicarboxylate metabolism";"Methane metabolism";"Cysteine and methionine metabolism";"Methylaspartate cycle";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Gluconeogenesis";"Citric acid cycle (TCA cycle)";"Carbon fixation in photosynthetic organisms";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"TCA cycle II (plants and fungi)";"Carbon fixation pathways in prokaryotes";"Superpathway of glyoxylate cycle and fatty acid degradation";"Pyruvate metabolism";"Formaldehyde assimilation I (serine pathway)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II" ID=BGER007065-PA|Name=BGER007065-PA 3 KEGG: 00730+3.1.3.1;KEGG: 00790+3.1.3.1;MetaCyc: PWY-5491 "Thiamine metabolism";"Folate biosynthesis";"Diethylphosphate degradation" ID=BGER024194-PA|Name=BGER024194-PA 4 Reactome: R-HSA-3000170;Reactome: R-HSA-2129379;Reactome: R-HSA-3000178;Reactome: R-HSA-216083 "Syndecan interactions";"Molecules associated with elastic fibres";"ECM proteoglycans";"Integrin cell surface interactions" ID=BGER008216-PA|Name=BGER008216-PA 3 Reactome: R-HSA-3299685;Reactome: R-HSA-5628897;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"TP53 Regulates Metabolic Genes";"Glutathione metabolism" ID=BGER001494-PA|Name=BGER001494-PA 7 Reactome: R-HSA-5617472;Reactome: R-HSA-3214841;Reactome: R-HSA-9609690;Reactome: R-HSA-8943724;Reactome: R-HSA-8953750;Reactome: R-HSA-2559580;Reactome: R-HSA-212300 "Activation of anterior HOX genes in hindbrain development during early embryogenesis";"PKMTs methylate histone lysines";"HCMV Early Events";"Regulation of PTEN gene transcription";"Transcriptional Regulation by E2F6";"Oxidative Stress Induced Senescence";"PRC2 methylates histones and DNA" ID=BGER015873-PA|Name=BGER015873-PA 1 Reactome: R-HSA-6803207 "TP53 Regulates Transcription of Caspase Activators and Caspases" ID=BGER008618-PA|Name=BGER008618-PA 1 Reactome: R-HSA-1660662 "Glycosphingolipid metabolism" ID=BGER005905-PA|Name=BGER005905-PA 5 MetaCyc: PWY-6855;MetaCyc: PWY-7822;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.14;Reactome: R-HSA-189085 "Chitin degradation I (archaea)";"Chitin degradation III (Serratia)";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Digestion of dietary carbohydrate" ID=BGER025491-PA|Name=BGER025491-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER010935-PA|Name=BGER010935-PA 56 Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-195253;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5610783;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761 "Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of beta-catenin by the destruction complex";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Degradation of AXIN";"Separation of Sister Chromatids";"Degradation of GLI2 by the proteasome";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling" ID=BGER009888-PA|Name=BGER009888-PA 2 KEGG: 00970+6.3.5.7;Reactome: R-HSA-2142753 "Aminoacyl-tRNA biosynthesis";"Arachidonic acid metabolism" ID=BGER011160-PA|Name=BGER011160-PA 1 Reactome: R-HSA-5683826 "Surfactant metabolism" ID=BGER020707-PA|Name=BGER020707-PA 10 Reactome: R-HSA-6783783;Reactome: R-HSA-9018677;Reactome: R-HSA-197264;Reactome: R-HSA-6785807;Reactome: R-HSA-9018679;KEGG: 00590+1.14.99.1;Reactome: R-HSA-9027604;Reactome: R-HSA-9025094;Reactome: R-HSA-2162123;Reactome: R-HSA-2142770 "Interleukin-10 signaling";"Biosynthesis of DHA-derived SPMs";"Nicotinamide salvaging";"Interleukin-4 and Interleukin-13 signaling";"Biosynthesis of EPA-derived SPMs";"Arachidonic acid metabolism";"Biosynthesis of electrophilic Omega-3 PUFA oxo-derivatives";"Biosynthesis of DPAn-3 SPMs";"Synthesis of Prostaglandins (PG) and Thromboxanes (TX)";"Synthesis of 15-eicosatetraenoic acid derivatives" ID=BGER016016-PA|Name=BGER016016-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER005784-PA|Name=BGER005784-PA 2 Reactome: R-HSA-5250971;Reactome: R-HSA-5682910 "Toxicity of botulinum toxin type C (BoNT/C)";"LGI-ADAM interactions" ID=BGER006353-PA|Name=BGER006353-PA 7 Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-749476;Reactome: R-HSA-73780;Reactome: R-HSA-76061;Reactome: R-HSA-73980;Reactome: R-HSA-76066 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 2 Promoter" ID=BGER012508-PA|Name=BGER012508-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER002954-PA|Name=BGER002954-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER024697-PA|Name=BGER024697-PA 2 KEGG: 00500+3.2.1.4;MetaCyc: PWY-6788 "Starch and sucrose metabolism";"Cellulose degradation II (fungi)" ID=BGER012333-PA|Name=BGER012333-PA 24 Reactome: R-HSA-202040;Reactome: R-HSA-416482;Reactome: R-HSA-418592;Reactome: R-HSA-418217;Reactome: R-HSA-400042;Reactome: R-HSA-8964315;Reactome: R-HSA-428930;Reactome: R-HSA-392451;Reactome: R-HSA-4086398;Reactome: R-HSA-392170;Reactome: R-HSA-432040;Reactome: R-HSA-420092;Reactome: R-HSA-416476;Reactome: R-HSA-456926;Reactome: R-HSA-9009391;Reactome: R-HSA-381676;Reactome: R-HSA-8964616;Reactome: R-HSA-418597;Reactome: R-HSA-418594;Reactome: R-HSA-500657;Reactome: R-HSA-6814122;Reactome: R-HSA-163359;Reactome: R-HSA-392851;Reactome: R-HSA-418555 "G-protein activation";"G alpha (12/13) signalling events";"ADP signalling through P2Y purinoceptor 1";"G beta:gamma signalling through PLC beta";"Adrenaline,noradrenaline inhibits insulin secretion";"G beta:gamma signalling through BTK";"Thromboxane signalling through TP receptor";"G beta:gamma signalling through PI3Kgamma";"Ca2+ pathway";"ADP signalling through P2Y purinoceptor 12";"Vasopressin regulates renal water homeostasis via Aquaporins";"Glucagon-type ligand receptors";"G alpha (q) signalling events";"Thrombin signalling through proteinase activated receptors (PARs)";"Extra-nuclear estrogen signaling";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"G beta:gamma signalling through CDC42";"G alpha (z) signalling events";"G alpha (i) signalling events";"Presynaptic function of Kainate receptors";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Glucagon signaling in metabolic regulation";"Prostacyclin signalling through prostacyclin receptor";"G alpha (s) signalling events" ID=BGER023229-PA|Name=BGER023229-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER027522-PA|Name=BGER027522-PA 4 MetaCyc: PWY-5912;KEGG: 00270+2.5.1.6;Reactome: R-HSA-156581;MetaCyc: PWY-5041 "2'-deoxymugineic acid phytosiderophore biosynthesis";"Cysteine and methionine metabolism";"Methylation";"S-adenosyl-L-methionine cycle II" ID=BGER018076-PA|Name=BGER018076-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-427413 "HATs acetylate histones";"NoRC negatively regulates rRNA expression" ID=BGER004365-PA|Name=BGER004365-PA 1 Reactome: R-HSA-352230 "Amino acid transport across the plasma membrane" ID=BGER000372-PA|Name=BGER000372-PA 10 MetaCyc: PWY-7909;KEGG: 00720+1.5.1.5+3.5.4.9;MetaCyc: PWY-3841;MetaCyc: PWY-5497;Reactome: R-HSA-196757;MetaCyc: PWY-5030;MetaCyc: PWY-6613;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-1722;MetaCyc: PWY-2201 "Formaldehyde oxidation VII (THF pathway)";"Carbon fixation pathways in prokaryotes";"Folate transformations II (plants)";"Purine nucleobases degradation II (anaerobic)";"Metabolism of folate and pterines";"L-histidine degradation III";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"One carbon pool by folate";"Formate assimilation into 5,10-methylenetetrahydrofolate";"Folate transformations I" ID=BGER016533-PA|Name=BGER016533-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" ID=BGER013285-PA|Name=BGER013285-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER007095-PA|Name=BGER007095-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" ID=BGER024880-PA|Name=BGER024880-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER000755-PA|Name=BGER000755-PA 7 Reactome: R-HSA-2979096;Reactome: R-HSA-2122948;Reactome: R-HSA-2691232;MetaCyc: PWY-7511;Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-9013507 "NOTCH2 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Protein ubiquitination";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH3 Activation and Transmission of Signal to the Nucleus" ID=BGER020223-PA|Name=BGER020223-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER000941-PA|Name=BGER000941-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER016259-PA|Name=BGER016259-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER007177-PA|Name=BGER007177-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" ID=BGER015582-PA|Name=BGER015582-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER011744-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER009973-PA|Name=BGER009973-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" ID=BGER020131-PA|Name=BGER020131-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER014067-PA|Name=BGER014067-PA 1 Reactome: R-HSA-162658 "Golgi Cisternae Pericentriolar Stack Reorganization" ID=BGER022811-PA|Name=BGER022811-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER005939-PA|Name=BGER005939-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER014018-PA|Name=BGER014018-PA 1 Reactome: R-HSA-3108214 "SUMOylation of DNA damage response and repair proteins" ID=BGER007603-PA|Name=BGER007603-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER020609-PA|Name=BGER020609-PA 1 Reactome: R-HSA-6782861 "Synthesis of wybutosine at G37 of tRNA(Phe)" ID=BGER023147-PA|Name=BGER023147-PA 1 Reactome: R-HSA-186797 "Signaling by PDGF" ID=BGER017826-PA|Name=BGER017826-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER013199-PA|Name=BGER013199-PA 4 Reactome: R-HSA-2500257;Reactome: R-HSA-2468052;Reactome: R-HSA-2470946;Reactome: R-HSA-2467813 "Resolution of Sister Chromatid Cohesion";"Establishment of Sister Chromatid Cohesion";"Cohesin Loading onto Chromatin";"Separation of Sister Chromatids" ID=BGER007886-PA|Name=BGER007886-PA 13 Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-72689 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Formation of a pool of free 40S subunits" ID=BGER019200-PA|Name=BGER019200-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER025998-PA|Name=BGER025998-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER001966-PA|Name=BGER001966-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER014194-PA|Name=BGER014194-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER012621-PA|Name=BGER012621-PA 3 MetaCyc: PWY-5491;KEGG: 00730+3.1.3.1;KEGG: 00790+3.1.3.1 "Diethylphosphate degradation";"Thiamine metabolism";"Folate biosynthesis" ID=BGER025674-PA|Name=BGER025674-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" ID=BGER028228-PA|Name=BGER028228-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008360-PA|Name=BGER008360-PA 3 Reactome: R-HSA-110328;Reactome: R-HSA-110329;Reactome: R-HSA-110357 "Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Cleavage of the damaged pyrimidine";"Displacement of DNA glycosylase by APEX1" ID=BGER010718-PA|Name=BGER010718-PA 4 KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943;KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219 "Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis" ID=BGER013591-PA|Name=BGER013591-PA 2 MetaCyc: PWY-6749;KEGG: 00520+5.4.2.10 "CMP-legionaminate biosynthesis I";"Amino sugar and nucleotide sugar metabolism" ID=BGER008416-PA|Name=BGER008416-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER027890-PA|Name=BGER027890-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER024286-PA|Name=BGER024286-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER012356-PA|Name=BGER012356-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER008919-PA|Name=BGER008919-PA 3 Reactome: R-HSA-4086400;Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "PCP/CE pathway";"Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" ID=BGER014600-PA|Name=BGER014600-PA 1 Reactome: R-HSA-425410 "Metal ion SLC transporters" ID=BGER029477-PA|Name=BGER029477-PA 4 Reactome: R-HSA-70895;MetaCyc: PWY-5642;KEGG: 00280+1.2.1.27;KEGG: 00640+1.2.1.27 "Branched-chain amino acid catabolism";"2,4-dinitrotoluene degradation";"Valine, leucine and isoleucine degradation";"Propanoate metabolism" ID=BGER003963-PA|Name=BGER003963-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" ID=BGER029100-PA|Name=BGER029100-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-8953750 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"Transcriptional Regulation by E2F6" ID=BGER002953-PA|Name=BGER002953-PA 4 KEGG: 00260+1.2.1.8+1.1.99.1;Reactome: R-HSA-6798163;MetaCyc: PWY-3722;MetaCyc: PWY-7494 "Glycine, serine and threonine metabolism";"Choline catabolism";"Glycine betaine biosynthesis II (Gram-positive bacteria)";"Choline degradation IV" ID=BGER007364-PA|Name=BGER007364-PA 2 KEGG: 00520+5.4.2.10;MetaCyc: PWY-6749 "Amino sugar and nucleotide sugar metabolism";"CMP-legionaminate biosynthesis I" ID=BGER006446-PA|Name=BGER006446-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER003935-PA|Name=BGER003935-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER021013-PA|Name=BGER021013-PA 4 MetaCyc: PWY-7822;MetaCyc: PWY-6855;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.14 "Chitin degradation III (Serratia)";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism" ID=BGER007678-PA|Name=BGER007678-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" ID=BGER020375-PA|Name=BGER020375-PA 1 Reactome: R-HSA-532668 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle" ID=BGER008570-PA|Name=BGER008570-PA 1 Reactome: R-HSA-189451 "Heme biosynthesis" ID=BGER013564-PA|Name=BGER013564-PA 8 Reactome: R-HSA-432720;Reactome: R-HSA-5140745;Reactome: R-HSA-190873;Reactome: R-HSA-3928665;Reactome: R-HSA-8856828;Reactome: R-HSA-196025;Reactome: R-HSA-8856825;Reactome: R-HSA-5099900 "Lysosome Vesicle Biogenesis";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"Gap junction degradation";"EPH-ephrin mediated repulsion of cells";"Clathrin-mediated endocytosis";"Formation of annular gap junctions";"Cargo recognition for clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD4" ID=BGER009856-PA|Name=BGER009856-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER001481-PA|Name=BGER001481-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" ID=BGER004026-PA|Name=BGER004026-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER018254-PA|Name=BGER018254-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER009742-PA|Name=BGER009742-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER012330-PA|Name=BGER012330-PA 25 Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-9646399;Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-8955332;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-380270;Reactome: R-HSA-5626467;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-380320;Reactome: R-HSA-8852276;Reactome: R-HSA-190861;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-5617833;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-190840 "HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"Aggrephagy";"Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Carboxyterminal post-translational modifications of tubulin";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"RHO GTPases activate IQGAPs";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Recruitment of NuMA to mitotic centrosomes";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Gap junction assembly";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Cilium Assembly";"HCMV Early Events";"COPI-mediated anterograde transport";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane" ID=BGER014279-PA|Name=BGER014279-PA 2 Reactome: R-HSA-390471;Reactome: R-HSA-6791226 "Association of TriC/CCT with target proteins during biosynthesis";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER024948-PA|Name=BGER024948-PA 1 Reactome: R-HSA-110320 "Translesion Synthesis by POLH" ID=BGER005212-PA|Name=BGER005212-PA 2 Reactome: R-HSA-3214815;Reactome: R-HSA-427413 "HDACs deacetylate histones";"NoRC negatively regulates rRNA expression" ID=BGER025716-PA|Name=BGER025716-PA 2 Reactome: R-HSA-9627069;Reactome: R-HSA-111458 "Regulation of the apoptosome activity";"Formation of apoptosome" ID=BGER001449-PA|Name=BGER001449-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER005453-PA|Name=BGER005453-PA 7 MetaCyc: PWY-6367;KEGG: 00562+3.1.4.11;KEGG: 04070+3.1.4.11;MetaCyc: PWY-8052;Reactome: R-HSA-1855204;MetaCyc: PWY-6351;MetaCyc: PWY-7039 "D-myo-inositol-5-phosphate metabolism";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"2-arachidonoylglycerol biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Phosphatidate metabolism, as a signaling molecule" ID=BGER005554-PA|Name=BGER005554-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER014339-PA|Name=BGER014339-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER019085-PA|Name=BGER019085-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" ID=BGER020963-PA|Name=BGER020963-PA 14 MetaCyc: PWY-8055;KEGG: 00564+2.3.1.51;Reactome: R-HSA-1483166;MetaCyc: PWY-5981;MetaCyc: PWY-7587;MetaCyc: PWY-5667;MetaCyc: PWY-7782;MetaCyc: PWY-7411;MetaCyc: PWY-8051;MetaCyc: PWY-8053;MetaCyc: PWY-7589;MetaCyc: PWY-7417;KEGG: 00561+2.3.1.51;MetaCyc: PWY-6453 "Palmitoyl ethanolamide biosynthesis";"Glycerophospholipid metabolism";"Synthesis of PA";"CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)";"CDP-diacylglycerol biosynthesis I";"Plasmalogen biosynthesis";"Phosphatidate biosynthesis (yeast)";"Anandamide biosynthesis I";"Anandamide biosynthesis II";"Palmitoleate biosynthesis III (cyanobacteria)";"Phospholipid remodeling (phosphatidate, yeast)";"Glycerolipid metabolism";"Stigma estolide biosynthesis" ID=BGER028147-PA|Name=BGER028147-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER027355-PA|Name=BGER027355-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER010983-PA|Name=BGER010983-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER000058-PA|Name=BGER000058-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER000920-PA|Name=BGER000920-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER021735-PA|Name=BGER021735-PA 6 Reactome: R-HSA-1222556;Reactome: R-HSA-6798695;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-917977;Reactome: R-HSA-77387 "ROS and RNS production in phagocytes";"Neutrophil degranulation";"Ion channel transport";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling";"Insulin receptor recycling" ID=BGER013201-PA|Name=BGER013201-PA 4 Reactome: R-HSA-2470946;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-2468052 "Cohesin Loading onto Chromatin";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"Establishment of Sister Chromatid Cohesion" ID=BGER020936-PA|Name=BGER020936-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER011233-PA|Name=BGER011233-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER003657-PA|Name=BGER003657-PA 3 Reactome: R-HSA-6790901;Reactome: R-HSA-72203;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Processing of Capped Intron-Containing Pre-mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER008945-PA|Name=BGER008945-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-375276 "G alpha (i) signalling events";"Peptide ligand-binding receptors" ID=BGER014657-PA|Name=BGER014657-PA 13 Reactome: R-HSA-2160916;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;KEGG: 00531+3.2.1.52;Reactome: R-HSA-2024101;Reactome: R-HSA-2022857;KEGG: 00513+3.2.1.52;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822;Reactome: R-HSA-1660662;MetaCyc: PWY-6902 "Hyaluronan uptake and degradation";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"Glycosaminoglycan degradation";"CS/DS degradation";"Keratan sulfate degradation";"Various types of N-glycan biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)";"Glycosphingolipid metabolism";"Chitin degradation II (Vibrio)" ID=BGER016267-PA|Name=BGER016267-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER004599-PA|Name=BGER004599-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER017123-PA|Name=BGER017123-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER003062-PC|Name=BGER003062-PC 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER025188-PA|Name=BGER025188-PA 3 MetaCyc: PWY-6700;MetaCyc: PWY-8106;Reactome: R-HSA-6782315 "Queuosine biosynthesis I (de novo)";"Queuosine biosynthesis III (queuosine salvage)";"tRNA modification in the nucleus and cytosol" ID=BGER023640-PA|Name=BGER023640-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER015176-PA|Name=BGER015176-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER009893-PC|Name=BGER009893-PC 1 Reactome: R-HSA-6804754 "Regulation of TP53 Expression" ID=BGER023251-PA|Name=BGER023251-PA 1 Reactome: R-HSA-77108 "Utilization of Ketone Bodies" ID=BGER020865-PA|Name=BGER020865-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER016420-PA|Name=BGER016420-PA 3 Reactome: R-HSA-6784531;Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "tRNA processing in the nucleus";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" ID=BGER011521-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER027356-PA|Name=BGER027356-PA 6 Reactome: R-HSA-68867;Reactome: R-HSA-176974;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-69052;Reactome: R-HSA-68949 "Assembly of the pre-replicative complex";"Unwinding of DNA";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Switching of origins to a post-replicative state";"Orc1 removal from chromatin" ID=BGER003385-PA|Name=BGER003385-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER002759-PA|Name=BGER002759-PA 4 KEGG: 00340+3.5.2.7;MetaCyc: PWY-5028;Reactome: R-HSA-70921;MetaCyc: PWY-5030 "Histidine metabolism";"L-histidine degradation II";"Histidine catabolism";"L-histidine degradation III" ID=BGER016607-PA|Name=BGER016607-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER012084-PA|Name=BGER012084-PA 4 MetaCyc: PWY-7494;Reactome: R-HSA-6798163;KEGG: 00260+1.2.1.8+1.1.99.1;MetaCyc: PWY-3722 "Choline degradation IV";"Choline catabolism";"Glycine, serine and threonine metabolism";"Glycine betaine biosynthesis II (Gram-positive bacteria)" ID=BGER017395-PA|Name=BGER017395-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER018749-PA|Name=BGER018749-PA 5 Reactome: R-HSA-917729;Reactome: R-HSA-9610379;Reactome: R-HSA-174490;Reactome: R-HSA-9615710;Reactome: R-HSA-162588 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events";"Membrane binding and targetting of GAG proteins";"Late endosomal microautophagy";"Budding and maturation of HIV virion" ID=BGER006548-PA|Name=BGER006548-PA 12 MetaCyc: PWY-5873;Reactome: R-HSA-2142789;KEGG: 00130+2.1.1.222+2.1.1.64;MetaCyc: PWY-5855;MetaCyc: PWY-5872;MetaCyc: PWY-7233;MetaCyc: PWY-6708;MetaCyc: PWY-7230;MetaCyc: PWY-5856;MetaCyc: PWY-5871;MetaCyc: PWY-5857;MetaCyc: PWY-5870 "Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol biosynthesis";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol-6 bypass biosynthesis (eukaryotic)";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)";"Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (eukaryotic)" ID=BGER016556-PA|Name=BGER016556-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-159236 "RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER018347-PA|Name=BGER018347-PA 1 Reactome: R-HSA-193648 "NRAGE signals death through JNK" ID=BGER017716-PA|Name=BGER017716-PA 52 Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-6781823;Reactome: R-HSA-73980;Reactome: R-HSA-6782210;Reactome: R-HSA-113418;Reactome: R-HSA-749476;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-203927;Reactome: R-HSA-73762;Reactome: R-HSA-8851708;Reactome: R-HSA-73780;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-9018519;Reactome: R-HSA-76071;Reactome: R-HSA-75955;Reactome: R-HSA-76061;Reactome: R-HSA-112382;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-1834949;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-72163;Reactome: R-HSA-168325;Reactome: R-HSA-73863;Reactome: R-HSA-167161;Reactome: R-HSA-167287;Reactome: R-HSA-167290;Reactome: R-HSA-73772;Reactome: R-HSA-167152;Reactome: R-HSA-76066;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-167172;Reactome: R-HSA-167242;Reactome: R-HSA-72203;Reactome: R-HSA-674695;Reactome: R-HSA-427413;Reactome: R-HSA-5601884;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-5578749;Reactome: R-HSA-72165;Reactome: R-HSA-5250924 "RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of TC-NER Pre-Incision Complex";"RNA Polymerase III Transcription Termination";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of the Early Elongation Complex";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"MicroRNA (miRNA) biogenesis";"RNA Polymerase I Transcription Initiation";"Signaling by FGFR2 IIIa TM";"RNA Polymerase III Chain Elongation";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Estrogen-dependent gene expression";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase II Transcription Elongation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Formation of RNA Pol II elongation complex";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cytosolic sensors of pathogen-associated DNA";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"mRNA Splicing - Major Pathway";"Viral Messenger RNA Synthesis";"RNA Polymerase I Transcription Termination";"HIV Transcription Initiation";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation";"RNA Polymerase I Promoter Escape";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"Transcription of the HIV genome";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Processing of Capped Intron-Containing Pre-mRNA";"RNA Polymerase II Pre-transcription Events";"NoRC negatively regulates rRNA expression";"PIWI-interacting RNA (piRNA) biogenesis";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Transcriptional regulation by small RNAs";"mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression" ID=BGER014147-PA|Name=BGER014147-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER006149-PA|Name=BGER006149-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" ID=BGER000355-PA|Name=BGER000355-PA 18 KEGG: 00591+3.1.1.4;Reactome: R-HSA-1482839;Reactome: R-HSA-1482801;MetaCyc: PWY-8051;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482788;MetaCyc: PWY-7416;MetaCyc: PWY-8053;Reactome: R-HSA-1482925;Reactome: R-HSA-1483166;Reactome: R-HSA-1482922;MetaCyc: PWY-7783;KEGG: 00592+3.1.1.4;KEGG: 00565+3.1.1.4;MetaCyc: PWY-7409;MetaCyc: PWY-7417;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803 "Linoleic acid metabolism";"Acyl chain remodelling of PE";"Acyl chain remodelling of PS";"Anandamide biosynthesis I";"Arachidonic acid metabolism";"Acyl chain remodelling of PC";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Anandamide biosynthesis II";"Acyl chain remodelling of PG";"Synthesis of PA";"Acyl chain remodelling of PI";"Plasmalogen degradation";"alpha-Linolenic acid metabolism";"Ether lipid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Phospholipid remodeling (phosphatidate, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing" ID=BGER001578-PA|Name=BGER001578-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER021146-PA|Name=BGER021146-PA 5 Reactome: R-HSA-111457;Reactome: R-HSA-111464;Reactome: R-HSA-111463;Reactome: R-HSA-111469;Reactome: R-HSA-9627069 "Release of apoptotic factors from the mitochondria";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"SMAC (DIABLO) binds to IAPs";"SMAC, XIAP-regulated apoptotic response";"Regulation of the apoptosome activity" ID=BGER026185-PA|Name=BGER026185-PA 4 MetaCyc: PWY-7546;MetaCyc: PWY-6482;Reactome: R-HSA-8849175;Reactome: R-HSA-5358493 "Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)";"Threonine catabolism";"Synthesis of diphthamide-EEF2" ID=BGER010063-PA|Name=BGER010063-PA 4 KEGG: 00340+4.2.1.49;MetaCyc: PWY-5028;MetaCyc: PWY-5030;Reactome: R-HSA-70921 "Histidine metabolism";"L-histidine degradation II";"L-histidine degradation III";"Histidine catabolism" ID=BGER003267-PA|Name=BGER003267-PA 2 Reactome: R-HSA-4755609;Reactome: R-HSA-446199 "Defective DHDDS causes retinitis pigmentosa 59";"Synthesis of Dolichyl-phosphate" ID=BGER016408-PA|Name=BGER016408-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" ID=BGER019841-PA|Name=BGER019841-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER010031-PA|Name=BGER010031-PA 1 Reactome: R-HSA-5676934 "Protein repair" ID=BGER018812-PA|Name=BGER018812-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" ID=BGER009916-PA|Name=BGER009916-PA 11 KEGG: 00020+1.1.1.42;MetaCyc: PWY-6549;MetaCyc: PWY-7268;MetaCyc: PWY-6728;MetaCyc: PWY-5913;MetaCyc: PWY-7124;KEGG: 00480+1.1.1.42;KEGG: 00720+1.1.1.42;MetaCyc: PWY-6969;MetaCyc: PWY-7254;Reactome: R-HSA-71403 "Citrate cycle (TCA cycle)";"L-glutamine biosynthesis III";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)";"Ethylene biosynthesis V (engineered)";"Glutathione metabolism";"Carbon fixation pathways in prokaryotes";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"TCA cycle VII (acetate-producers)";"Citric acid cycle (TCA cycle)" ID=BGER026061-PA|Name=BGER026061-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023755-PA|Name=BGER023755-PA 18 Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-112382;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-167242;Reactome: R-HSA-674695;Reactome: R-HSA-75955;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-77075;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167200;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167160;Reactome: R-HSA-167287 "TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"Formation of RNA Pol II elongation complex";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Elongation";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"RNA Pol II CTD phosphorylation and interaction with CE";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"HIV elongation arrest and recovery" ID=BGER002225-PA|Name=BGER002225-PA 6 Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER021571-PA|Name=BGER021571-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" ID=BGER002070-PA|Name=BGER002070-PA 10 KEGG: 00460+2.3.2.2;MetaCyc: PWY-6842;MetaCyc: PWY-4041;MetaCyc: PWY-4061;MetaCyc: PWY-5826;KEGG: 00430+2.3.2.2;MetaCyc: PWY-7559;MetaCyc: PWY-7112;MetaCyc: PWY-8001;KEGG: 00480+2.3.2.2+3.4.19.13 "Cyanoamino acid metabolism";"Glutathione-mediated detoxification II";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification I";"Hypoglycin biosynthesis";"Taurine and hypotaurine metabolism";"Glutathione degradation (DUG pathway";"4-hydroxy-2-nonenal detoxification";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione metabolism" ID=BGER008492-PA|Name=BGER008492-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER014796-PA|Name=BGER014796-PA 11 Reactome: R-HSA-3371497;Reactome: R-HSA-380259;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-6811436;Reactome: R-HSA-8854518;Reactome: R-HSA-2132295;Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-6807878 "HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Loss of Nlp from mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"COPI-independent Golgi-to-ER retrograde traffic";"AURKA Activation by TPX2";"MHC class II antigen presentation";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"COPI-mediated anterograde transport" ID=BGER011153-PA|Name=BGER011153-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER019679-PA|Name=BGER019679-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" ID=BGER028766-PA|Name=BGER028766-PA 6 Reactome: R-HSA-189085;MetaCyc: PWY-7900;MetaCyc: PWY-5067;MetaCyc: PWY-622;KEGG: 00500+2.4.1.18;KEGG: 00500+3.2.1.1 "Digestion of dietary carbohydrate";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch biosynthesis";"Starch and sucrose metabolism";"Starch and sucrose metabolism" ID=BGER007185-PA|Name=BGER007185-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER010827-PA|Name=BGER010827-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER010038-PC|Name=BGER010038-PC 8 KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-2465910;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"MASTL Facilitates Mitotic Progression";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER001794-PA|Name=BGER001794-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER008293-PA|Name=BGER008293-PA 4 MetaCyc: PWY-6902;MetaCyc: PWY-6855;MetaCyc: PWY-7822;KEGG: 00520+3.2.1.14 "Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism" ID=BGER024973-PA|Name=BGER024973-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" ID=BGER026533-PA|Name=BGER026533-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER019496-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER025770-PA|Name=BGER025770-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER029427-PA|Name=BGER029427-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER021782-PA|Name=BGER021782-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" ID=BGER028515-PA|Name=BGER028515-PA 7 Reactome: R-HSA-381042;Reactome: R-HSA-381183;Reactome: R-HSA-381033;Reactome: R-HSA-114608;Reactome: R-HSA-983170;Reactome: R-HSA-3371453;Reactome: R-HSA-381070 "PERK regulates gene expression";"ATF6 (ATF6-alpha) activates chaperone genes";"ATF6 (ATF6-alpha) activates chaperones";"Platelet degranulation";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Regulation of HSF1-mediated heat shock response";"IRE1alpha activates chaperones" ID=BGER003661-PA|Name=BGER003661-PA 4 MetaCyc: PWY-6834;Reactome: R-HSA-351202;KEGG: 00270+4.1.1.50;KEGG: 00330+4.1.1.50 "Spermidine biosynthesis III";"Metabolism of polyamines";"Cysteine and methionine metabolism";"Arginine and proline metabolism" ID=BGER003548-PA|Name=BGER003548-PA 2 Reactome: R-HSA-6807505;Reactome: R-HSA-72163 "RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Major Pathway" ID=BGER010449-PA|Name=BGER010449-PA 20 Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-5696397;Reactome: R-HSA-110312;Reactome: R-HSA-6782135;Reactome: R-HSA-5651801;Reactome: R-HSA-5655862;Reactome: R-HSA-5696400;Reactome: R-HSA-5693607;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5693616;Reactome: R-HSA-5685938;Reactome: R-HSA-5656121;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-5656169;Reactome: R-HSA-69091;Reactome: R-HSA-174411 "Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by REV1";"Dual incision in TC-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK";"Dual Incision in GG-NER";"Processing of DNA double-strand break ends";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Single Strand Annealing (SSA)";"Translesion synthesis by POLI";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"Termination of translesion DNA synthesis";"Polymerase switching";"Polymerase switching on the C-strand of the telomere" ID=BGER009917-PA|Name=BGER009917-PA 11 Reactome: R-HSA-418597;Reactome: R-HSA-163615;Reactome: R-HSA-418594;Reactome: R-HSA-5610787;Reactome: R-HSA-432040;KEGG: 00230+4.6.1.1;Reactome: R-HSA-163359;Reactome: R-HSA-418555;Reactome: R-HSA-164378;Reactome: R-HSA-170670;Reactome: R-HSA-170660 "G alpha (z) signalling events";"PKA activation";"G alpha (i) signalling events";"Hedgehog 'off' state";"Vasopressin regulates renal water homeostasis via Aquaporins";"Purine metabolism";"Glucagon signaling in metabolic regulation";"G alpha (s) signalling events";"PKA activation in glucagon signalling";"Adenylate cyclase inhibitory pathway";"Adenylate cyclase activating pathway" ID=BGER028724-PA|Name=BGER028724-PA 5 Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-5693571;Reactome: R-HSA-5689901;Reactome: R-HSA-69473 "Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Nonhomologous End-Joining (NHEJ)";"Metalloprotease DUBs";"G2/M DNA damage checkpoint" ID=BGER025730-PA|Name=BGER025730-PA 2 Reactome: R-HSA-5357905;Reactome: R-HSA-8876198 "Regulation of TNFR1 signaling";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER016198-PA|Name=BGER016198-PA 34 Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-75955;Reactome: R-HSA-73762;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-76042;Reactome: R-HSA-69202;Reactome: R-HSA-112382;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-5696395;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-8939236;Reactome: R-HSA-113418;Reactome: R-HSA-69231;Reactome: R-HSA-427413;Reactome: R-HSA-674695;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-167161;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167158;Reactome: R-HSA-73863;Reactome: R-HSA-69656;Reactome: R-HSA-167172;Reactome: R-HSA-69273 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Transcription Initiation";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cyclin E associated events during G1/S transition";"Formation of RNA Pol II elongation complex";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of Incision Complex in GG-NER";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Formation of the Early Elongation Complex";"Cyclin D associated events in G1";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Pre-transcription Events";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"HIV Transcription Initiation";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase I Transcription Termination";"Cyclin A:Cdk2-associated events at S phase entry";"Transcription of the HIV genome";"Cyclin A/B1/B2 associated events during G2/M transition" ID=BGER001003-PA|Name=BGER001003-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER014612-PA|Name=BGER014612-PA 5 Reactome: R-HSA-389661;KEGG: 00250+1.2.1.88;MetaCyc: PWY-6853;Reactome: R-HSA-70688;KEGG: 00330+1.2.1.88 "Glyoxylate metabolism and glycine degradation";"Alanine, aspartate and glutamate metabolism";"Ethylene biosynthesis II (microbes)";"Proline catabolism";"Arginine and proline metabolism" ID=BGER024559-PA|Name=BGER024559-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER004958-PA|Name=BGER004958-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER011223-PA|Name=BGER011223-PA 31 MetaCyc: PWY-8047;MetaCyc: PWY-6799;MetaCyc: PWY-7746;MetaCyc: PWY-7723;MetaCyc: PWY-4381;Reactome: R-HSA-199220;MetaCyc: PWY-7664;MetaCyc: PWY-5989;MetaCyc: PWY-7858;MetaCyc: PWY-5973;MetaCyc: PWY-5142;MetaCyc: PWY-7388;MetaCyc: PWY-8049;MetaCyc: PWY-7663;KEGG: 00780+1.1.1.100+4.2.1.59+2.3.1.41;MetaCyc: PWY-6282;MetaCyc: PWY-5366;Reactome: R-HSA-75105;Reactome: R-HSA-2426168;Reactome: R-HSA-163765;MetaCyc: PWY-5367;MetaCyc: PWY-5147;MetaCyc: PWY-6519;MetaCyc: PWY-5966-1;MetaCyc: PWY-5971;MetaCyc: PWY-6113;MetaCyc: PWY-5994;Reactome: R-HSA-9029558;MetaCyc: PWYG-321;KEGG: 00061+1.1.1.100+2.3.1.85+4.2.1.59+2.3.1.39+2.3.1.41+3.1.2.14;MetaCyc: PWY-8012 "Bryostatin biosynthesis";"Fatty acid biosynthesis initiation (plant mitochondria)";"Mycobacterial sulfolipid biosynthesis";"Bacterial bioluminescence";"Fatty acid biosynthesis initiation (bacteria and plants)";"Vitamin B5 (pantothenate) metabolism";"Oleate biosynthesis IV (anaerobic)";"Stearate biosynthesis II (bacteria and plants)";"(5Z)-dodecenoate biosynthesis II";"Cis-vaccenate biosynthesis";"Acyl-[acyl-carrier protein] thioesterase pathway";"Octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)";"Pederin biosynthesis";"Gondoate biosynthesis (anaerobic)";"Biotin metabolism";"Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)";"Palmitoleate biosynthesis II (plants and bacteria)";"Fatty acyl-CoA biosynthesis";"Activation of gene expression by SREBF (SREBP)";"ChREBP activates metabolic gene expression";"Petroselinate biosynthesis";"Oleate biosynthesis I (plants)";"8-amino-7-oxononanoate biosynthesis I";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"Palmitate biosynthesis II (bacteria and plant cytoplasm)";"Superpathway of mycolate biosynthesis";"Palmitate biosynthesis (animals and fungi, cytoplasm)";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"";"Fatty acid biosynthesis";"Mupirocin biosynthesis" ID=BGER029432-PA|Name=BGER029432-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782;MetaCyc: PWY-6733;Reactome: R-HSA-9640463;MetaCyc: PWY-5884 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I" ID=BGER014722-PA|Name=BGER014722-PA 2 Reactome: R-HSA-8869496;Reactome: R-HSA-1268020 "TFAP2A acts as a transcriptional repressor during retinoic acid induced cell differentiation";"Mitochondrial protein import" ID=BGER004500-PA|Name=BGER004500-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER004202-PA|Name=BGER004202-PA 57 Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-195253;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-69601;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-382556;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-5658442;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-202424;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-6798695 "Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of beta-catenin by the destruction complex";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"ABC-family proteins mediated transport";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Regulation of RAS by GAPs";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Downstream TCR signaling";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Degradation of AXIN";"Separation of Sister Chromatids";"Neutrophil degranulation" ID=BGER022056-PA|Name=BGER022056-PA 8 Reactome: R-HSA-5173105;Reactome: R-HSA-5083633;KEGG: 00514+2.4.1.109;MetaCyc: PWY-7979;KEGG: 00515+2.4.1.109;MetaCyc: PWY-7921;Reactome: R-HSA-5083629;MetaCyc: PWY-7922 "O-linked glycosylation";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1";"Other types of O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Mannose type O-glycan biosynthesis";"Protein O-mannosylation I (yeast)";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Protein O-mannosylation II (mammals, core M1 and core M2)" ID=BGER011534-PA|Name=BGER011534-PA 9 MetaCyc: PWY-7198;MetaCyc: PWY-7197;MetaCyc: PWY-7187;Reactome: R-HSA-499943;Reactome: R-HSA-8949664;KEGG: 00240+2.7.4.9;MetaCyc: PWY-7184;MetaCyc: PWY-6545;MetaCyc: PWY-7210 "Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotide phosphorylation";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Interconversion of nucleotide di- and triphosphates";"Processing of SMDT1";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotides biosynthesis from CTP" ID=BGER007754-PA|Name=BGER007754-PA 18 Reactome: R-HSA-3108214;Reactome: R-HSA-5693607;Reactome: R-HSA-5693579;Reactome: R-HSA-5693571;Reactome: R-HSA-5693554;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-8953750;Reactome: R-HSA-69473;Reactome: R-HSA-6804756;MetaCyc: PWY-7511;Reactome: R-HSA-912446;Reactome: R-HSA-5693565;Reactome: R-HSA-1221632;Reactome: R-HSA-6796648;Reactome: R-HSA-5689901 "SUMOylation of DNA damage response and repair proteins";"Processing of DNA double-strand break ends";"Homologous DNA Pairing and Strand Exchange";"Nonhomologous End-Joining (NHEJ)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Transcriptional Regulation by E2F6";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation";"Protein ubiquitination";"Meiotic recombination";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Meiotic synapsis";"TP53 Regulates Transcription of DNA Repair Genes";"Metalloprotease DUBs" ID=BGER002329-PA|Name=BGER002329-PA 6 KEGG: 04070+3.1.3.56;KEGG: 00562+3.1.3.56;MetaCyc: PWY-6362;MetaCyc: PWY-6364;MetaCyc: PWY-6363;Reactome: R-HSA-1855183 "Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)";"D-myo-inositol (1,3,4)-trisphosphate biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate degradation";"Synthesis of IP2, IP, and Ins in the cytosol" ID=BGER022957-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER008462-PA|Name=BGER008462-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER025627-PA|Name=BGER025627-PA 1 KEGG: 00500+2.4.1.15 "Starch and sucrose metabolism" ID=BGER028128-PA|Name=BGER028128-PA 10 KEGG: 04926+2.7.11.1;Reactome: R-HSA-442742;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-444257;Reactome: R-HSA-437239;KEGG: 04151+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Relaxin signaling pathway";"CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling";"Thermogenesis";"mTOR signaling pathway";"RSK activation";"Recycling pathway of L1";"PI3K-Akt signaling pathway";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER028262-PA|Name=BGER028262-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER018649-PA|Name=BGER018649-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER024969-PA|Name=BGER024969-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008014-PA|Name=BGER008014-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER009048-PA|Name=BGER009048-PA 12 Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-1251985;Reactome: R-HSA-177929;Reactome: R-HSA-2691232;Reactome: R-HSA-193692;Reactome: R-HSA-1442490;Reactome: R-HSA-2122948;Reactome: R-HSA-5362798;Reactome: R-HSA-2660826;Reactome: R-HSA-982772;Reactome: R-HSA-75893 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Nuclear signaling by ERBB4";"Signaling by EGFR";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Regulated proteolysis of p75NTR";"Collagen degradation";"Activated NOTCH1 Transmits Signal to the Nucleus";"Release of Hh-Np from the secreting cell";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Growth hormone receptor signaling";"TNF signaling" ID=BGER014341-PA|Name=BGER014341-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER017322-PA|Name=BGER017322-PA 1 Reactome: R-HSA-1445148 "Translocation of SLC2A4 (GLUT4) to the plasma membrane" ID=BGER006437-PA|Name=BGER006437-PA 2 Reactome: R-HSA-5678895;Reactome: R-HSA-382556 "Defective CFTR causes cystic fibrosis";"ABC-family proteins mediated transport" ID=BGER010477-PA|Name=BGER010477-PA 8 MetaCyc: PWY-7717;KEGG: 00380+3.5.1.9;MetaCyc: PWY-7765;MetaCyc: PWY-6309;MetaCyc: PWY-7734;MetaCyc: PWY-7733;KEGG: 00630+3.5.1.9;MetaCyc: PWY-5651 "3-hydroxy-4-methyl-anthranilate biosynthesis I";"Tryptophan metabolism";"3-hydroxy-4-methyl-anthranilate biosynthesis II";"L-tryptophan degradation XI (mammalian, via kynurenine)";"Quinoxaline-2-carboxylate biosynthesis";"3-hydroxyquinaldate biosynthesis";"Glyoxylate and dicarboxylate metabolism";"L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde" ID=BGER029732-PA|Name=BGER029732-PA 3 Reactome: R-HSA-3322077;KEGG: 00500+2.4.1.11;MetaCyc: PWY-5067 "Glycogen synthesis";"Starch and sucrose metabolism";"Glycogen biosynthesis II (from UDP-D-Glucose)" ID=BGER029017-PA|Name=BGER029017-PA 2 Reactome: R-HSA-5689603;Reactome: R-HSA-5696394 "UCH proteinases";"DNA Damage Recognition in GG-NER" ID=BGER002769-PA|Name=BGER002769-PA 5 Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-77387 "Amino acids regulate mTORC1";"Ion channel transport";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Insulin receptor recycling" ID=BGER023579-PA|Name=BGER023579-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" ID=BGER018748-PA|Name=BGER018748-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER015251-PA|Name=BGER015251-PA 3 Reactome: R-HSA-975577;Reactome: R-HSA-2022854;Reactome: R-HSA-913709 "N-Glycan antennae elongation";"Keratan sulfate biosynthesis";"O-linked glycosylation of mucins" ID=BGER003389-PA|Name=BGER003389-PA 1 Reactome: R-HSA-446205 "Synthesis of GDP-mannose" ID=BGER006655-PA|Name=BGER006655-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER014925-PA|Name=BGER014925-PA 3 KEGG: 00730+3.1.3.2;KEGG: 00740+3.1.3.2;MetaCyc: PWY-6348 "Thiamine metabolism";"Riboflavin metabolism";"Phosphate acquisition" ID=BGER010196-PA|Name=BGER010196-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER000483-PA|Name=BGER000483-PA 8 KEGG: 00190+7.1.2.2;Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;KEGG: 00195+7.1.2.2;Reactome: R-HSA-77387;MetaCyc: PWY-7980;Reactome: R-HSA-983712 "Oxidative phosphorylation";"ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Photosynthesis";"Insulin receptor recycling";"ATP biosynthesis";"Ion channel transport" ID=BGER007443-PA|Name=BGER007443-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022274-PA|Name=BGER022274-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER002789-PA|Name=BGER002789-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" ID=BGER015220-PA|Name=BGER015220-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER003468-PA|Name=BGER003468-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER020721-PA|Name=BGER020721-PA 1 Reactome: R-HSA-381753 "Olfactory Signaling Pathway" ID=BGER022345-PA|Name=BGER022345-PA 7 Reactome: R-HSA-9029569;Reactome: R-HSA-8943724;Reactome: R-HSA-5625886;Reactome: R-HSA-3214815;Reactome: R-HSA-9018519;Reactome: R-HSA-983231;Reactome: R-HSA-3214842 "NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of PTEN gene transcription";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"HDACs deacetylate histones";"Estrogen-dependent gene expression";"Factors involved in megakaryocyte development and platelet production";"HDMs demethylate histones" ID=BGER011032-PA|Name=BGER011032-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER016334-PA|Name=BGER016334-PA 19 MetaCyc: PWY-7187;MetaCyc: PWY-7224;MetaCyc: PWY-7197;Reactome: R-HSA-380270;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7210;MetaCyc: PWY-7205;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7227;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7226;MetaCyc: PWY-7198;MetaCyc: PWY-7220;MetaCyc: PWY-7176;MetaCyc: PWY-6545;MetaCyc: PWY-7221;MetaCyc: PWY-7222;MetaCyc: PWY-7184;Reactome: R-HSA-380320 "Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Purine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotide phosphorylation";"Recruitment of mitotic centrosome proteins and complexes";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"CMP phosphorylation";"Purine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis";"Pyrimidine metabolism";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Adenosine deoxyribonucleotides de novo biosynthesis II";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine ribonucleotides de novo biosynthesis";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Recruitment of NuMA to mitotic centrosomes" ID=BGER028590-PA|Name=BGER028590-PA 3 Reactome: R-HSA-5689880;Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Ub-specific processing proteases";"Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER001022-PA|Name=BGER001022-PA 13 MetaCyc: PWY-5123;MetaCyc: PWY-7182;MetaCyc: PWY-7736;MetaCyc: PWY-6383;MetaCyc: PWY-7721;KEGG: 00900+2.5.1.10+2.5.1.1;MetaCyc: PWY-6859;MetaCyc: PWY-7709;MetaCyc: PWY-7141;MetaCyc: PWY-7102;MetaCyc: PWY-5122;MetaCyc: PWY-7410;MetaCyc: PWY-7659 "Trans, trans-farnesyl diphosphate biosynthesis";"Linalool biosynthesis I";"Stellatic acid biosynthesis";"Mono-trans, poly-cis decaprenyl phosphate biosynthesis";"Methyl phomopsenoate biosynthesis";"Terpenoid backbone biosynthesis";"All-trans-farnesol biosynthesis";"(3R)-linalool biosynthesis";"(3S)-linalool biosynthesis";"Bisabolene biosynthesis (engineered)";"Geranyl diphosphate biosynthesis";"Ipsdienol biosynthesis";"Viridicatumtoxin biosynthesis" ID=BGER003186-PA|Name=BGER003186-PA 4 Reactome: R-HSA-112043;Reactome: R-HSA-418594;Reactome: R-HSA-6814122;Reactome: R-HSA-202040 "PLC beta mediated events";"G alpha (i) signalling events";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G-protein activation" ID=BGER016206-PA|Name=BGER016206-PA 4 Reactome: R-HSA-5693554;Reactome: R-HSA-5693579;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)" ID=BGER011079-PA|Name=BGER011079-PA 26 Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-1445148;Reactome: R-HSA-983189;Reactome: R-HSA-5626467;Reactome: R-HSA-9619483;Reactome: R-HSA-3371497;Reactome: R-HSA-9646399;Reactome: R-HSA-6811436;Reactome: R-HSA-437239;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-2500257;Reactome: R-HSA-389960;Reactome: R-HSA-2132295;Reactome: R-HSA-9609736;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-9609690;Reactome: R-HSA-6807878;Reactome: R-HSA-380320;Reactome: R-HSA-6811434;Reactome: R-HSA-68877;Reactome: R-HSA-190861;Reactome: R-HSA-389977;Reactome: R-HSA-8852276 "Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Kinesins";"RHO GTPases activate IQGAPs";"Activation of AMPK downstream of NMDARs";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Aggrephagy";"COPI-independent Golgi-to-ER retrograde traffic";"Recycling pathway of L1";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Resolution of Sister Chromatid Cohesion";"Formation of tubulin folding intermediates by CCT/TriC";"MHC class II antigen presentation";"Assembly and cell surface presentation of NMDA receptors";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HCMV Early Events";"COPI-mediated anterograde transport";"Recruitment of NuMA to mitotic centrosomes";"COPI-dependent Golgi-to-ER retrograde traffic";"Mitotic Prometaphase";"Gap junction assembly";"Post-chaperonin tubulin folding pathway";"The role of GTSE1 in G2/M progression after G2 checkpoint" ID=BGER028399-PA|Name=BGER028399-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER016822-PA|Name=BGER016822-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER018664-PA|Name=BGER018664-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER003192-PA|Name=BGER003192-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER028303-PA|Name=BGER028303-PA 2 Reactome: R-HSA-2672351;Reactome: R-HSA-5578775 "Stimuli-sensing channels";"Ion homeostasis" ID=BGER021311-PA|Name=BGER021311-PA 2 Reactome: R-HSA-983231;Reactome: R-HSA-383280 "Factors involved in megakaryocyte development and platelet production";"Nuclear Receptor transcription pathway" ID=BGER018297-PA|Name=BGER018297-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER027255-PA|Name=BGER027255-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER011235-PA|Name=BGER011235-PA 5 Reactome: R-HSA-9029558;Reactome: R-HSA-75105;Reactome: R-HSA-2426168;Reactome: R-HSA-163765;Reactome: R-HSA-199220 "NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Fatty acyl-CoA biosynthesis";"Activation of gene expression by SREBF (SREBP)";"ChREBP activates metabolic gene expression";"Vitamin B5 (pantothenate) metabolism" ID=BGER027024-PA|Name=BGER027024-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER011712-PA|Name=BGER011712-PA 14 MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598 "Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis" ID=BGER017250-PA|Name=BGER017250-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER006505-PA|Name=BGER006505-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER007243-PA|Name=BGER007243-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" ID=BGER001194-PA|Name=BGER001194-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-2151201 "PPARA activates gene expression";"Transcriptional activation of mitochondrial biogenesis" ID=BGER021203-PA|Name=BGER021203-PA 4 KEGG: 00410+4.1.1.9;Reactome: R-HSA-9033241;KEGG: 00640+4.1.1.9;Reactome: R-HSA-390247 "beta-Alanine metabolism";"Peroxisomal protein import";"Propanoate metabolism";"Beta-oxidation of very long chain fatty acids" ID=BGER017428-PA|Name=BGER017428-PA 1 Reactome: R-HSA-442660 "Na+/Cl- dependent neurotransmitter transporters" ID=BGER028623-PA|Name=BGER028623-PA 8 KEGG: 00190+7.1.2.2;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;KEGG: 00195+7.1.2.2;Reactome: R-HSA-1222556;Reactome: R-HSA-77387;Reactome: R-HSA-983712;MetaCyc: PWY-7980 "Oxidative phosphorylation";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Photosynthesis";"ROS and RNS production in phagocytes";"Insulin receptor recycling";"Ion channel transport";"ATP biosynthesis" ID=BGER022533-PA|Name=BGER022533-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" ID=BGER008309-PA|Name=BGER008309-PA 2 KEGG: 00520+5.4.2.10;MetaCyc: PWY-6749 "Amino sugar and nucleotide sugar metabolism";"CMP-legionaminate biosynthesis I" ID=BGER007645-PA|Name=BGER007645-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-389661 "Peroxisomal protein import";"Glyoxylate metabolism and glycine degradation" ID=BGER028910-PA|Name=BGER028910-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER013679-PA|Name=BGER013679-PA 2 Reactome: R-HSA-2022377;Reactome: R-HSA-6798695 "Metabolism of Angiotensinogen to Angiotensins";"Neutrophil degranulation" ID=BGER021033-PA|Name=BGER021033-PA 9 KEGG: 00603+3.2.1.52;KEGG: 00531+3.2.1.52;KEGG: 00511+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;KEGG: 00513+3.2.1.52;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822 "Glycosphingolipid biosynthesis - globo and isoglobo series";"Glycosaminoglycan degradation";"Other glycan degradation";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Various types of N-glycan biosynthesis";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)" ID=BGER009570-PA|Name=BGER009570-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-611105 "Citric acid cycle (TCA cycle)";"Respiratory electron transport" ID=BGER003876-PA|Name=BGER003876-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER012459-PA|Name=BGER012459-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER014266-PA|Name=BGER014266-PA 14 Reactome: R-HSA-8986944;Reactome: R-HSA-9029569;Reactome: R-HSA-8943723;Reactome: R-HSA-203927;Reactome: R-HSA-9018519;Reactome: R-HSA-1912408;Reactome: R-HSA-4086398;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-9022692;Reactome: R-HSA-426496;Reactome: R-HSA-426486;Reactome: R-HSA-5687128;Reactome: R-HSA-8934593 "Transcriptional Regulation by MECP2";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of PTEN mRNA translation";"MicroRNA (miRNA) biogenesis";"Estrogen-dependent gene expression";"Pre-NOTCH Transcription and Translation";"Ca2+ pathway";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"Regulation of MECP2 expression and activity";"Post-transcriptional silencing by small RNAs";"Small interfering RNA (siRNA) biogenesis";"MAPK6/MAPK4 signaling";"Regulation of RUNX1 Expression and Activity" ID=BGER012821-PA|Name=BGER012821-PA 12 Reactome: R-HSA-9013507;Reactome: R-HSA-9013700;Reactome: R-HSA-977225;Reactome: R-HSA-2644606;Reactome: R-HSA-1251985;Reactome: R-HSA-2894862;Reactome: R-HSA-3928665;Reactome: R-HSA-193692;Reactome: R-HSA-205043;Reactome: R-HSA-2979096;Reactome: R-HSA-2122948;Reactome: R-HSA-9017802 "NOTCH3 Activation and Transmission of Signal to the Nucleus";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Amyloid fiber formation";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Nuclear signaling by ERBB4";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"EPH-ephrin mediated repulsion of cells";"Regulated proteolysis of p75NTR";"NRIF signals cell death from the nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Noncanonical activation of NOTCH3" ID=BGER003996-PA|Name=BGER003996-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440 "Intra-Golgi traffic";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network" ID=BGER003428-PA|Name=BGER003428-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER016731-PA|Name=BGER016731-PA 4 Reactome: R-HSA-3928662;Reactome: R-HSA-8856828;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "EPHB-mediated forward signaling";"Clathrin-mediated endocytosis";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER011035-PA|Name=BGER011035-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-72702 "Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition" ID=BGER026068-PA|Name=BGER026068-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER017509-PA|Name=BGER017509-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" ID=BGER007968-PA|Name=BGER007968-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER010691-PA|Name=BGER010691-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER015574-PA|Name=BGER015574-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER005589-PA|Name=BGER005589-PA 33 Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-1169408;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-2500257;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-5578749;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-9648025;Reactome: R-HSA-9610379;Reactome: R-HSA-141444;Reactome: R-HSA-168276;Reactome: R-HSA-168271;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-5663220;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-4551638 "Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"SUMOylation of DNA replication proteins";"HCMV Early Events";"ISG15 antiviral mechanism";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Resolution of Sister Chromatid Cohesion";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transcriptional regulation by small RNAs";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"EML4 and NUDC in mitotic spindle formation";"HCMV Late Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"NS1 Mediated Effects on Host Pathways";"Transport of Ribonucleoproteins into the Host Nucleus";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"RHO GTPases Activate Formins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"SUMOylation of chromatin organization proteins" ID=BGER005328-PA|Name=BGER005328-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER010250-PA|Name=BGER010250-PA 7 MetaCyc: PWY-6470;MetaCyc: PWY-5265;Reactome: R-HSA-446193;KEGG: 00510+2.7.8.15;KEGG: 00550+2.7.8.13;Reactome: R-HSA-4549356;MetaCyc: PWY-6471 "Peptidoglycan biosynthesis V (beta-lactam resistance)";"Peptidoglycan biosynthesis II (staphylococci)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"N-Glycan biosynthesis";"Peptidoglycan biosynthesis";"Defective DPAGT1 causes DPAGT1-CDG (CDG-1j) and CMSTA2";"Peptidoglycan biosynthesis IV (Enterococcus faecium)" ID=BGER023304-PA|Name=BGER023304-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" ID=BGER027785-PA|Name=BGER027785-PA 5 Reactome: R-HSA-189085;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;MetaCyc: PWY-6855;MetaCyc: PWY-7822 "Digestion of dietary carbohydrate";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Chitin degradation III (Serratia)" ID=BGER007782-PA|Name=BGER007782-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" ID=BGER029428-PA|Name=BGER029428-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" ID=BGER009617-PA|Name=BGER009617-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER025182-PA|Name=BGER025182-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER012483-PA|Name=BGER012483-PA 2 Reactome: R-HSA-196783;KEGG: 00770+6.3.2.5 "Coenzyme A biosynthesis";"Pantothenate and CoA biosynthesis" ID=BGER017288-PA|Name=BGER017288-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER002585-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER011669-PA|Name=BGER011669-PA 5 Reactome: R-HSA-6811434;Reactome: R-HSA-204005;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "COPI-dependent Golgi-to-ER retrograde traffic";"COPII-mediated vesicle transport";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" ID=BGER011156-PA|Name=BGER011156-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER018722-PA|Name=BGER018722-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER021513-PA|Name=BGER021513-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER023778-PA|Name=BGER023778-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER014149-PA|Name=BGER014149-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER013744-PA|Name=BGER013744-PA 17 MetaCyc: PWY-561;KEGG: 00720+1.1.1.37;KEGG: 00620+1.1.1.37;MetaCyc: PWY-1622;MetaCyc: PWY-6969;MetaCyc: PWY-5392;MetaCyc: PWY-7115;MetaCyc: PWY-5690;KEGG: 00710+1.1.1.37;MetaCyc: PWY-8086;KEGG: 00020+1.1.1.37;KEGG: 00630+1.1.1.37;KEGG: 00270+1.1.1.37;KEGG: 00680+1.1.1.37;MetaCyc: PWY-6728;MetaCyc: PWY-5913;MetaCyc: PWY-7383 "Superpathway of glyoxylate cycle and fatty acid degradation";"Carbon fixation pathways in prokaryotes";"Pyruvate metabolism";"Formaldehyde assimilation I (serine pathway)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"TCA cycle II (plants and fungi)";"Carbon fixation in photosynthetic organisms";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Citrate cycle (TCA cycle)";"Glyoxylate and dicarboxylate metabolism";"Cysteine and methionine metabolism";"Methane metabolism";"Methylaspartate cycle";"Partial TCA cycle (obligate autotrophs)";"Anaerobic energy metabolism (invertebrates, cytosol)" ID=BGER017136-PA|Name=BGER017136-PA 3 MetaCyc: PWY-5491;KEGG: 00790+3.1.3.1;KEGG: 00730+3.1.3.1 "Diethylphosphate degradation";"Folate biosynthesis";"Thiamine metabolism" ID=BGER020798-PA|Name=BGER020798-PA 2 Reactome: R-HSA-1614635;Reactome: R-HSA-162710 "Sulfur amino acid metabolism";"Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER012452-PA|Name=BGER012452-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER003946-PA|Name=BGER003946-PA 4 Reactome: R-HSA-2024096;Reactome: R-HSA-6798695;KEGG: 00531+2.3.1.78;Reactome: R-HSA-2206291 "HS-GAG degradation";"Neutrophil degranulation";"Glycosaminoglycan degradation";"MPS IIIC - Sanfilippo syndrome C" ID=BGER020613-PA|Name=BGER020613-PA 12 Reactome: R-HSA-416476;KEGG: 04926+2.7.11.1;Reactome: R-HSA-418885;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-194840;Reactome: R-HSA-193648;Reactome: R-HSA-416482;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "G alpha (q) signalling events";"Relaxin signaling pathway";"DCC mediated attractive signaling";"Thermogenesis";"mTOR signaling pathway";"Rho GTPase cycle";"NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER021725-PA|Name=BGER021725-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER003268-PA|Name=BGER003268-PA 19 Reactome: R-HSA-3000484;Reactome: R-HSA-8866423;Reactome: R-HSA-8963888;Reactome: R-HSA-3000471;Reactome: R-HSA-202733;Reactome: R-HSA-975634;Reactome: R-HSA-3000497;Reactome: R-HSA-8964026;Reactome: R-HSA-3000480;Reactome: R-HSA-8856828;Reactome: R-HSA-8963901;Reactome: R-HSA-8856825;Reactome: R-HSA-8964046;Reactome: R-HSA-8957275;Reactome: R-HSA-8964038;Reactome: R-HSA-432142;Reactome: R-HSA-381426;Reactome: R-HSA-5686938;Reactome: R-HSA-8964041 "Scavenging by Class F Receptors";"VLDL assembly";"Chylomicron assembly";"Scavenging by Class B Receptors";"Cell surface interactions at the vascular wall";"Retinoid metabolism and transport";"Scavenging by Class H Receptors";"Chylomicron clearance";"Scavenging by Class A Receptors";"Clathrin-mediated endocytosis";"Chylomicron remodeling";"Cargo recognition for clathrin-mediated endocytosis";"VLDL clearance";"Post-translational protein phosphorylation";"LDL clearance";"Platelet sensitization by LDL";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Regulation of TLR by endogenous ligand";"LDL remodeling" ID=BGER025576-PA|Name=BGER025576-PA 7 MetaCyc: PWY-6545;MetaCyc: PWY-7187;MetaCyc: PWY-7210;MetaCyc: PWY-7197;MetaCyc: PWY-7184;MetaCyc: PWY-7198;KEGG: 00240+2.7.4.9 "Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotide phosphorylation";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine metabolism" ID=BGER014924-PA|Name=BGER014924-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER001353-PA|Name=BGER001353-PA 2 KEGG: 00563+2.4.1.198;Reactome: R-HSA-162710 "Glycosylphosphatidylinositol (GPI)-anchor biosynthesis";"Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER015949-PA|Name=BGER015949-PA 15 Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167242;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-9603505;Reactome: R-HSA-167246 "RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"NTRK3 as a dependence receptor";"Tat-mediated elongation of the HIV-1 transcript" ID=BGER023862-PA|Name=BGER023862-PA 3 Reactome: R-HSA-77588;Reactome: R-HSA-111367;Reactome: R-HSA-73856 "SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"SLBP independent Processing of Histone Pre-mRNAs";"RNA Polymerase II Transcription Termination" ID=BGER022118-PA|Name=BGER022118-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER001355-PA|Name=BGER001355-PA 2 Reactome: R-HSA-983231;Reactome: R-HSA-383280 "Factors involved in megakaryocyte development and platelet production";"Nuclear Receptor transcription pathway" ID=BGER022926-PA|Name=BGER022926-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-983231 "Mitochondrial calcium ion transport";"Factors involved in megakaryocyte development and platelet production" ID=BGER013335-PA|Name=BGER013335-PA 6 Reactome: R-HSA-72702;Reactome: R-HSA-72649;Reactome: R-HSA-72706;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689 "Ribosomal scanning and start codon recognition";"Translation initiation complex formation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits" ID=BGER012046-PA|Name=BGER012046-PA 1 Reactome: R-HSA-6787450 "tRNA modification in the mitochondrion" ID=BGER010189-PA|Name=BGER010189-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER025581-PA|Name=BGER025581-PA 7 Reactome: R-HSA-389661;Reactome: R-HSA-70268;KEGG: 00010+1.2.4.1;KEGG: 00020+1.2.4.1;Reactome: R-HSA-204174;KEGG: 00620+1.2.4.1;Reactome: R-HSA-5362517 "Glyoxylate metabolism and glycine degradation";"Pyruvate metabolism";"Glycolysis / Gluconeogenesis";"Citrate cycle (TCA cycle)";"Regulation of pyruvate dehydrogenase (PDH) complex";"Pyruvate metabolism";"Signaling by Retinoic Acid" ID=BGER028898-PA|Name=BGER028898-PA 2 Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" ID=BGER022935-PA|Name=BGER022935-PA 3 Reactome: R-HSA-8866654;Reactome: R-HSA-9033241;Reactome: R-HSA-9603798 "E3 ubiquitin ligases ubiquitinate target proteins";"Peroxisomal protein import";"Class I peroxisomal membrane protein import" ID=BGER029436-PA|Name=BGER029436-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER007217-PA|Name=BGER007217-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" ID=BGER004350-PA|Name=BGER004350-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER009383-PA|Name=BGER009383-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" ID=BGER015946-PA|Name=BGER015946-PA 5 Reactome: R-HSA-165181;Reactome: R-HSA-380972;Reactome: R-HSA-8854214;Reactome: R-HSA-5628897;Reactome: R-HSA-1632852 "Inhibition of TSC complex formation by PKB";"Energy dependent regulation of mTOR by LKB1-AMPK";"TBC/RABGAPs";"TP53 Regulates Metabolic Genes";"Macroautophagy" ID=BGER011857-PA|Name=BGER011857-PA 19 Reactome: R-HSA-3000471;Reactome: R-HSA-202733;Reactome: R-HSA-975634;Reactome: R-HSA-3000497;Reactome: R-HSA-8866423;Reactome: R-HSA-3000484;Reactome: R-HSA-8963888;Reactome: R-HSA-432142;Reactome: R-HSA-5686938;Reactome: R-HSA-8964041;Reactome: R-HSA-381426;Reactome: R-HSA-8964026;Reactome: R-HSA-8856828;Reactome: R-HSA-3000480;Reactome: R-HSA-8856825;Reactome: R-HSA-8963901;Reactome: R-HSA-8957275;Reactome: R-HSA-8964038;Reactome: R-HSA-8964046 "Scavenging by Class B Receptors";"Cell surface interactions at the vascular wall";"Retinoid metabolism and transport";"Scavenging by Class H Receptors";"VLDL assembly";"Scavenging by Class F Receptors";"Chylomicron assembly";"Platelet sensitization by LDL";"Regulation of TLR by endogenous ligand";"LDL remodeling";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Chylomicron clearance";"Clathrin-mediated endocytosis";"Scavenging by Class A Receptors";"Cargo recognition for clathrin-mediated endocytosis";"Chylomicron remodeling";"Post-translational protein phosphorylation";"LDL clearance";"VLDL clearance" ID=BGER007401-PA|Name=BGER007401-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER013393-PA|Name=BGER013393-PA 56 Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5658442;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5607764;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5689603;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-8948751;Reactome: R-HSA-69017 "Degradation of AXIN";"Separation of Sister Chromatids";"Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of RAS by GAPs";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CLEC7A (Dectin-1) signaling";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"UCH proteinases";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6" ID=BGER023899-PA|Name=BGER023899-PA 40 Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167161;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-167172;Reactome: R-HSA-674695;Reactome: R-HSA-167242;Reactome: R-HSA-72203;Reactome: R-HSA-5601884;Reactome: R-HSA-5578749;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-72165;Reactome: R-HSA-5617472;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-167200;Reactome: R-HSA-167162;Reactome: R-HSA-113418;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-203927;Reactome: R-HSA-8851708;Reactome: R-HSA-75955;Reactome: R-HSA-9018519;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-112382;Reactome: R-HSA-76042;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-6807505 "Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"HIV Transcription Initiation";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"Transcription of the HIV genome";"RNA Polymerase II Pre-transcription Events";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Processing of Capped Intron-Containing Pre-mRNA";"PIWI-interacting RNA (piRNA) biogenesis";"Transcriptional regulation by small RNAs";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Splicing - Minor Pathway";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II HIV Promoter Escape";"Formation of the Early Elongation Complex";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"MicroRNA (miRNA) biogenesis";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Elongation";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA polymerase II transcribes snRNA genes" ID=BGER008805-PA|Name=BGER008805-PA 1 Reactome: R-HSA-8873719 "RAB geranylgeranylation" ID=BGER012263-PA|Name=BGER012263-PA 1 Reactome: R-HSA-2393930 "Phosphate bond hydrolysis by NUDT proteins" ID=BGER019483-PA|Name=BGER019483-PA 5 KEGG: 00520+3.5.99.6;Reactome: R-HSA-70171;MetaCyc: PWY-6906;MetaCyc: PWY-5514;MetaCyc: PWY-6855 "Amino sugar and nucleotide sugar metabolism";"Glycolysis";"Chitin derivatives degradation";"UDP-N-acetyl-D-galactosamine biosynthesis II";"Chitin degradation I (archaea)" ID=BGER023799-PA|Name=BGER023799-PA 8 Reactome: R-HSA-68952;Reactome: R-HSA-69183;Reactome: R-HSA-174430;Reactome: R-HSA-113501;Reactome: R-HSA-68962;Reactome: R-HSA-69166;Reactome: R-HSA-69091;Reactome: R-HSA-174411 "DNA replication initiation";"Processive synthesis on the lagging strand";"Telomere C-strand synthesis initiation";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Activation of the pre-replicative complex";"Removal of the Flap Intermediate";"Polymerase switching";"Polymerase switching on the C-strand of the telomere" ID=BGER025312-PA|Name=BGER025312-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER019907-PA|Name=BGER019907-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" ID=BGER014172-PA|Name=BGER014172-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER009640-PA|Name=BGER009640-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" ID=BGER026821-PA|Name=BGER026821-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-8949664 "Mitochondrial calcium ion transport";"Processing of SMDT1" ID=BGER000687-PA|Name=BGER000687-PA 8 MetaCyc: PWY-6922;KEGG: 00330+1.2.1.41;Reactome: R-HSA-8964539;KEGG: 00332+1.2.1.41+2.7.2.11;KEGG: 00330+2.7.2.11;KEGG: 00332+1.2.1.41;KEGG: 00332+2.7.2.11;KEGG: 00330+1.2.1.41+2.7.2.11 "L-Ndelta-acetylornithine biosynthesis";"Arginine and proline metabolism";"Glutamate and glutamine metabolism";"Carbapenem biosynthesis";"Arginine and proline metabolism";"Carbapenem biosynthesis";"Carbapenem biosynthesis";"Arginine and proline metabolism" ID=BGER024220-PA|Name=BGER024220-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER023290-PA|Name=BGER023290-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" ID=BGER008711-PA|Name=BGER008711-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER022512-PA|Name=BGER022512-PA 6 MetaCyc: PWY-7817;Reactome: R-HSA-114508;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;KEGG: 00561+2.7.1.107;KEGG: 00564+2.7.1.107 "Type I lipoteichoic acid biosynthesis (S. aureus)";"Effects of PIP2 hydrolysis";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Glycerolipid metabolism";"Glycerophospholipid metabolism" ID=BGER021674-PA|Name=BGER021674-PA 57 Reactome: R-HSA-195253;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5610783;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-5607761;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813 "Degradation of beta-catenin by the destruction complex";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Degradation of DVL";"Ub-specific processing proteases";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Degradation of GLI2 by the proteasome";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Dectin-1 mediated noncanonical NF-kB signaling";"Neutrophil degranulation";"Degradation of AXIN";"Separation of Sister Chromatids" ID=BGER005374-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER023900-PA|Name=BGER023900-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER015696-PA|Name=BGER015696-PA 13 Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation" ID=BGER016080-PA|Name=BGER016080-PA 24 Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-5626467;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-9619483;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-8955332;Reactome: R-HSA-437239;Reactome: R-HSA-6811436;Reactome: R-HSA-9609736;Reactome: R-HSA-2132295;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-190861;Reactome: R-HSA-8852276;Reactome: R-HSA-68877;Reactome: R-HSA-6811434;Reactome: R-HSA-380320 "Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"RHO GTPases activate IQGAPs";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Activation of AMPK downstream of NMDARs";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Carboxyterminal post-translational modifications of tubulin";"Recycling pathway of L1";"COPI-independent Golgi-to-ER retrograde traffic";"Assembly and cell surface presentation of NMDA receptors";"MHC class II antigen presentation";"COPI-mediated anterograde transport";"HCMV Early Events";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"Gap junction assembly";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Mitotic Prometaphase";"COPI-dependent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes" ID=BGER011184-PA|Name=BGER011184-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER009546-PA|Name=BGER009546-PA 2 Reactome: R-HSA-156581;Reactome: R-HSA-72764 "Methylation";"Eukaryotic Translation Termination" ID=BGER010307-PA|Name=BGER010307-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER007109-PA|Name=BGER007109-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER028719-PA|Name=BGER028719-PA 11 Reactome: R-HSA-3656253;Reactome: R-HSA-3560801;Reactome: R-HSA-3000170;Reactome: R-HSA-2022928;Reactome: R-HSA-2024096;Reactome: R-HSA-202733;Reactome: R-HSA-975634;Reactome: R-HSA-1971475;Reactome: R-HSA-3560783;Reactome: R-HSA-4420332;Reactome: R-HSA-3656237 "Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"Defective B3GAT3 causes JDSSDHD";"Syndecan interactions";"HS-GAG biosynthesis";"HS-GAG degradation";"Cell surface interactions at the vascular wall";"Retinoid metabolism and transport";"A tetrasaccharide linker sequence is required for GAG synthesis";"Defective B4GALT7 causes EDS, progeroid type";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT2 causes exostoses 2" ID=BGER026837-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER024791-PA|Name=BGER024791-PA 5 Reactome: R-HSA-75955;Reactome: R-HSA-8866654;Reactome: R-HSA-201722;Reactome: R-HSA-674695;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"E3 ubiquitin ligases ubiquitinate target proteins";"Formation of the beta-catenin:TCF transactivating complex";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex" ID=BGER007145-PA|Name=BGER007145-PA 6 MetaCyc: PWY-6733;MetaCyc: PWY-7782;Reactome: R-HSA-9640463;MetaCyc: PWY-5884;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Wax biosynthesis";"Wax esters biosynthesis I";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER001376-PA|Name=BGER001376-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER027687-PA|Name=BGER027687-PA 5 Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947;Reactome: R-HSA-350054;Reactome: R-HSA-3214815 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"Notch-HLH transcription pathway";"HDACs deacetylate histones" ID=BGER014368-PA|Name=BGER014368-PA 7 MetaCyc: PWY-7039;Reactome: R-HSA-2029485;MetaCyc: PWY-3561;KEGG: 00565+3.1.4.4;Reactome: R-HSA-1483166;Reactome: R-HSA-1483148;KEGG: 00564+3.1.4.4 "Phosphatidate metabolism, as a signaling molecule";"Role of phospholipids in phagocytosis";"Choline biosynthesis III";"Ether lipid metabolism";"Synthesis of PA";"Synthesis of PG";"Glycerophospholipid metabolism" ID=BGER016166-PA|Name=BGER016166-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER001257-PA|Name=BGER001257-PA 2 Reactome: R-HSA-73614;Reactome: R-HSA-73621 "Pyrimidine salvage";"Pyrimidine catabolism" ID=BGER011439-PA|Name=BGER011439-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER021656-PA|Name=BGER021656-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER026452-PA|Name=BGER026452-PA 1 Reactome: R-HSA-1483101 "Synthesis of PS" ID=BGER023228-PA|Name=BGER023228-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER027880-PA|Name=BGER027880-PA 5 Reactome: R-HSA-6798695;MetaCyc: PWY-8060;MetaCyc: PWY-7180;KEGG: 00030+4.1.2.4;Reactome: R-HSA-71336 "Neutrophil degranulation";"2-deoxy-D-ribose degradation I";"2-deoxy-alpha-D-ribose 1-phosphate degradation";"Pentose phosphate pathway";"Pentose phosphate pathway" ID=BGER010376-PA|Name=BGER010376-PA 4 KEGG: 00970+6.1.1.17;Reactome: R-HSA-379726;KEGG: 00860+6.1.1.17;MetaCyc: PWY-5188 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation";"Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis I (from glutamate)" ID=BGER014561-PA|Name=BGER014561-PA 2 Reactome: R-HSA-975957;Reactome: R-HSA-9010553 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs" ID=BGER022511-PA|Name=BGER022511-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER013619-PA|Name=BGER013619-PA 1 Reactome: R-HSA-6802952 "Signaling by BRAF and RAF fusions" ID=BGER003379-PA|Name=BGER003379-PA 6 Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72695;Reactome: R-HSA-72702;Reactome: R-HSA-72649;Reactome: R-HSA-72706 "L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Formation of the ternary complex, and subsequently, the 43S complex";"Ribosomal scanning and start codon recognition";"Translation initiation complex formation";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER019168-PA|Name=BGER019168-PA 3 Reactome: R-HSA-8963684;KEGG: 00350+1.13.11.5;KEGG: 00643+1.13.11.5 "Tyrosine catabolism";"Tyrosine metabolism";"Styrene degradation" ID=BGER026537-PA|Name=BGER026537-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" ID=BGER014464-PA|Name=BGER014464-PA 6 Reactome: R-HSA-5626467;Reactome: R-HSA-381426;Reactome: R-HSA-3769402;Reactome: R-HSA-8957275;Reactome: R-HSA-2173796;Reactome: R-HSA-201722 "RHO GTPases activate IQGAPs";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Deactivation of the beta-catenin transactivating complex";"Post-translational protein phosphorylation";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER014460-PA|Name=BGER014460-PA 1 Reactome: R-HSA-1445148 "Translocation of SLC2A4 (GLUT4) to the plasma membrane" ID=BGER021885-PA|Name=BGER021885-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER028455-PA|Name=BGER028455-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER014188-PA|Name=BGER014188-PA 10 KEGG: 00531+3.2.1.23;KEGG: 00604+3.2.1.23;KEGG: 00511+3.2.1.23;Reactome: R-HSA-6798695;Reactome: R-HSA-2024096;KEGG: 00600+3.2.1.23;Reactome: R-HSA-2206292;Reactome: R-HSA-2160916;KEGG: 00052+3.2.1.23;MetaCyc: PWY-6807 "Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Other glycan degradation";"Neutrophil degranulation";"HS-GAG degradation";"Sphingolipid metabolism";"MPS VII - Sly syndrome";"Hyaluronan uptake and degradation";"Galactose metabolism";"Xyloglucan degradation II (exoglucanase)" ID=BGER012937-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER014660-PA|Name=BGER014660-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER021283-PA|Name=BGER021283-PA 13 Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation" ID=BGER002197-PA|Name=BGER002197-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER024094-PA|Name=BGER024094-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER016992-PA|Name=BGER016992-PA 1 KEGG: 00970+6.3.5.7 "Aminoacyl-tRNA biosynthesis" ID=BGER016692-PA|Name=BGER016692-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER017936-PA|Name=BGER017936-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" ID=BGER022569-PA|Name=BGER022569-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" ID=BGER000899-PA|Name=BGER000899-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER012501-PA|Name=BGER012501-PA 2 MetaCyc: PWY-6281;KEGG: 00970+6.1.1.11 "L-selenocysteine biosynthesis II (archaea and eukaryotes)";"Aminoacyl-tRNA biosynthesis" ID=BGER012631-PA|Name=BGER012631-PA 1 Reactome: R-HSA-2173788 "Downregulation of TGF-beta receptor signaling" ID=BGER013684-PA|Name=BGER013684-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" ID=BGER011465-PA|Name=BGER011465-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" ID=BGER028761-PA|Name=BGER028761-PA 2 Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" ID=BGER026409-PA|Name=BGER026409-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER003585-PA|Name=BGER003585-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878 "Intra-Golgi traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport" ID=BGER013064-PA|Name=BGER013064-PA 10 MetaCyc: PWY-6613;MetaCyc: PWY-2201;MetaCyc: PWY-1722;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-7909;Reactome: R-HSA-196757;MetaCyc: PWY-5497;MetaCyc: PWY-3841;MetaCyc: PWY-5030;KEGG: 00720+1.5.1.5+3.5.4.9 "Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Folate transformations I";"Formate assimilation into 5,10-methylenetetrahydrofolate";"One carbon pool by folate";"Formaldehyde oxidation VII (THF pathway)";"Metabolism of folate and pterines";"Purine nucleobases degradation II (anaerobic)";"Folate transformations II (plants)";"L-histidine degradation III";"Carbon fixation pathways in prokaryotes" ID=BGER016425-PA|Name=BGER016425-PA 6 Reactome: R-HSA-2564830;MetaCyc: PWY-7269;Reactome: R-HSA-196807;MetaCyc: PWY-7268;KEGG: 00760+2.7.1.23;MetaCyc: PWY-5083 "Cytosolic iron-sulfur cluster assembly";"NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)";"Nicotinate metabolism";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Nicotinate and nicotinamide metabolism";"NAD/NADH phosphorylation and dephosphorylation" ID=BGER024535-PA|Name=BGER024535-PA 3 MetaCyc: PWY-5491;KEGG: 00730+3.1.3.1;KEGG: 00790+3.1.3.1 "Diethylphosphate degradation";"Thiamine metabolism";"Folate biosynthesis" ID=BGER022806-PA|Name=BGER022806-PA 12 MetaCyc: PWY-5340;MetaCyc: PWY-6683;Reactome: R-HSA-2408550;KEGG: 00920+2.7.1.25;Reactome: R-HSA-174362;KEGG: 00450+2.7.7.4;KEGG: 00261+2.7.7.4;KEGG: 00230+2.7.7.4;KEGG: 00920+2.7.7.4;MetaCyc: PWY-6932;KEGG: 00230+2.7.1.25;MetaCyc: PWY-5278 "Sulfate activation for sulfonation";"Assimilatory sulfate reduction III";"Metabolism of ingested H2SeO4 and H2SeO3 into H2Se";"Sulfur metabolism";"Transport and synthesis of PAPS";"Selenocompound metabolism";"Monobactam biosynthesis";"Purine metabolism";"Sulfur metabolism";"Selenate reduction";"Purine metabolism";"Sulfite oxidation III" ID=BGER023343-PA|Name=BGER023343-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER003413-PA|Name=BGER003413-PA 2 Reactome: R-HSA-379726;KEGG: 00970+6.1.1.15 "Mitochondrial tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" ID=BGER004529-PA|Name=BGER004529-PA 14 MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-7035 "Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis" ID=BGER026244-PA|Name=BGER026244-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER021037-PA|Name=BGER021037-PA 2 Reactome: R-HSA-8964539;Reactome: R-HSA-2151201 "Glutamate and glutamine metabolism";"Transcriptional activation of mitochondrial biogenesis" ID=BGER020807-PA|Name=BGER020807-PA 7 Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-68877;Reactome: R-HSA-4615885;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220 "Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase";"SUMOylation of DNA replication proteins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins" ID=BGER006184-PA|Name=BGER006184-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-5693568 "Fanconi Anemia Pathway";"Resolution of D-loop Structures through Holliday Junction Intermediates" ID=BGER005336-PA|Name=BGER005336-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER022104-PA|Name=BGER022104-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER013890-PA|Name=BGER013890-PA 4 Reactome: R-HSA-112382;Reactome: R-HSA-674695;Reactome: R-HSA-8866654;Reactome: R-HSA-75955 "Formation of RNA Pol II elongation complex";"RNA Polymerase II Pre-transcription Events";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Transcription Elongation" ID=BGER015974-PA|Name=BGER015974-PA 1 Reactome: R-HSA-8964572 "Lipid particle organization" ID=BGER007083-PA|Name=BGER007083-PA 15 Reactome: R-HSA-112382;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-6796648;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-674695;Reactome: R-HSA-167158;Reactome: R-HSA-167242;Reactome: R-HSA-167238;Reactome: R-HSA-75955;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167200 "Formation of RNA Pol II elongation complex";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"TP53 Regulates Transcription of DNA Repair Genes";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Pre-transcription Events";"Formation of the HIV-1 Early Elongation Complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Transcription Elongation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat" ID=BGER023424-PA|Name=BGER023424-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-8964038 "Neutrophil degranulation";"LDL clearance" ID=BGER005325-PA|Name=BGER005325-PA 2 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs" ID=BGER010471-PA|Name=BGER010471-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER004438-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER000482-PA|Name=BGER000482-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-381038 "SRP-dependent cotranslational protein targeting to membrane";"XBP1(S) activates chaperone genes" ID=BGER026531-PA|Name=BGER026531-PA 1 Reactome: R-HSA-204626 "Hypusine synthesis from eIF5A-lysine" ID=BGER005066-PA|Name=BGER005066-PA 1 Reactome: R-HSA-2022928 "HS-GAG biosynthesis" ID=BGER009138-PA|Name=BGER009138-PA 4 Reactome: R-HSA-446199;KEGG: 00510+2.7.1.108;MetaCyc: PWY-6129;Reactome: R-HSA-4755583 "Synthesis of Dolichyl-phosphate";"N-Glycan biosynthesis";"Dolichol and dolichyl phosphate biosynthesis";"Defective DOLK causes DOLK-CDG (CDG-1m)" ID=BGER026850-PA|Name=BGER026850-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER015419-PA|Name=BGER015419-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER017805-PA|Name=BGER017805-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER024590-PA|Name=BGER024590-PA 6 Reactome: R-HSA-8948751;MetaCyc: PWY-7511;Reactome: R-HSA-8939902;Reactome: R-HSA-8863795;Reactome: R-HSA-2173788;Reactome: R-HSA-983168 "Regulation of PTEN stability and activity";"Protein ubiquitination";"Regulation of RUNX2 expression and activity";"Downregulation of ERBB2 signaling";"Downregulation of TGF-beta receptor signaling";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER028419-PA|Name=BGER028419-PA 1 Reactome: R-HSA-390648 "Muscarinic acetylcholine receptors" ID=BGER009634-PA|Name=BGER009634-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER003297-PA|Name=BGER003297-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022414-PA|Name=BGER022414-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER006425-PA|Name=BGER006425-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-5689880 "Mitochondrial calcium ion transport";"Ub-specific processing proteases" ID=BGER017968-PA|Name=BGER017968-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER012009-PA|Name=BGER012009-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER018019-PA|Name=BGER018019-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" ID=BGER012945-PA|Name=BGER012945-PA 3 Reactome: R-HSA-5423646;Reactome: R-HSA-2142691;MetaCyc: PWY-7533 "Aflatoxin activation and detoxification";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis" ID=BGER015837-PA|Name=BGER015837-PA 5 Reactome: R-HSA-2426168;MetaCyc: PWY-922;KEGG: 00900+2.7.4.2;MetaCyc: PWY-7391;Reactome: R-HSA-191273 "Activation of gene expression by SREBF (SREBP)";"Mevalonate pathway I";"Terpenoid backbone biosynthesis";"Isoprene biosynthesis II (engineered)";"Cholesterol biosynthesis" ID=BGER007685-PA|Name=BGER007685-PA 3 Reactome: R-HSA-1236974;Reactome: R-HSA-9609523;Reactome: R-HSA-1799339 "ER-Phagosome pathway";"Insertion of tail-anchored proteins into the endoplasmic reticulum membrane";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER022017-PA|Name=BGER022017-PA 7 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-5663220;Reactome: R-HSA-606279;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"RHO GTPases Activate Formins";"Deposition of new CENPA-containing nucleosomes at the centromere";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER017368-PA|Name=BGER017368-PA 12 MetaCyc: PWY-5132;MetaCyc: PWY-7857;MetaCyc: PWY-5108;MetaCyc: PWY-6672;MetaCyc: PWY-5133;KEGG: 00640+6.2.1.1;MetaCyc: PWY-7118;KEGG: 00620+6.2.1.1;KEGG: 00720+6.2.1.1;KEGG: 00680+6.2.1.1;KEGG: 00630+6.2.1.1;KEGG: 00010+6.2.1.1 "Lupulone and humulone biosynthesis";"Adlupulone and adhumulone biosynthesis";"L-isoleucine biosynthesis V";"Cis-genanyl-coa degradation";"Colupulone and cohumulone biosynthesis";"Propanoate metabolism";"Chitin degradation to ethanol";"Pyruvate metabolism";"Carbon fixation pathways in prokaryotes";"Methane metabolism";"Glyoxylate and dicarboxylate metabolism";"Glycolysis / Gluconeogenesis" ID=BGER020499-PA|Name=BGER020499-PA 5 Reactome: R-HSA-204005;Reactome: R-HSA-5694530;Reactome: R-HSA-983170;Reactome: R-HSA-2132295;Reactome: R-HSA-1655829 "COPII-mediated vesicle transport";"Cargo concentration in the ER";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"MHC class II antigen presentation";"Regulation of cholesterol biosynthesis by SREBP (SREBF)" ID=BGER002957-PA|Name=BGER002957-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6784531 "Major pathway of rRNA processing in the nucleolus and cytosol";"tRNA processing in the nucleus" ID=BGER001528-PA|Name=BGER001528-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER005073-PA|Name=BGER005073-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER005377-PA|Name=BGER005377-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" ID=BGER027933-PA|Name=BGER027933-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER026118-PA|Name=BGER026118-PA 6 Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68949;Reactome: R-HSA-69052 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin";"Switching of origins to a post-replicative state" ID=BGER022121-PA|Name=BGER022121-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER008509-PA|Name=BGER008509-PA 6 MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84 "Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis" ID=BGER023316-PA|Name=BGER023316-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER025575-PA|Name=BGER025575-PA 3 Reactome: R-HSA-8878166;Reactome: R-HSA-6785807;Reactome: R-HSA-8939902 "Transcriptional regulation by RUNX2";"Interleukin-4 and Interleukin-13 signaling";"Regulation of RUNX2 expression and activity" ID=BGER019275-PA|Name=BGER019275-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER012574-PA|Name=BGER012574-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER003255-PA|Name=BGER003255-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER025713-PA|Name=BGER025713-PA 6 Reactome: R-HSA-6803204;Reactome: R-HSA-6804759;Reactome: R-HSA-6803205;Reactome: R-HSA-6803207;Reactome: R-HSA-139915;Reactome: R-HSA-6803211 "TP53 Regulates Transcription of Genes Involved in Cytochrome C Release";"Regulation of TP53 Activity through Association with Co-factors";"TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain";"TP53 Regulates Transcription of Caspase Activators and Caspases";"Activation of PUMA and translocation to mitochondria";"TP53 Regulates Transcription of Death Receptors and Ligands" ID=BGER024976-PA|Name=BGER024976-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER021797-PA|Name=BGER021797-PA 18 KEGG: 00350+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00270+2.6.1.1;KEGG: 00710+2.6.1.1;MetaCyc: PWY-6642;KEGG: 00330+2.6.1.1;MetaCyc: PWY-7117;KEGG: 00220+2.6.1.1;KEGG: 00950+2.6.1.1;MetaCyc: PWY-7383;MetaCyc: PWY-5913;KEGG: 00360+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00401+2.6.1.1;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00960+2.6.1.1;KEGG: 00400+2.6.1.1 "Tyrosine metabolism";"Coenzyme M biosynthesis II";"Cysteine and methionine metabolism";"Carbon fixation in photosynthetic organisms";"(R)-cysteate degradation";"Arginine and proline metabolism";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Arginine biosynthesis";"Isoquinoline alkaloid biosynthesis";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Phenylalanine metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Novobiocin biosynthesis";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Tropane, piperidine and pyridine alkaloid biosynthesis";"Phenylalanine, tyrosine and tryptophan biosynthesis" ID=BGER004533-PB|Name=BGER004533-PB 14 MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041;MetaCyc: PWY-6433;MetaCyc: PWY-7724;MetaCyc: PWY-5972;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602 "Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)" ID=BGER028163-PA|Name=BGER028163-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-8949664 "Mitochondrial calcium ion transport";"Processing of SMDT1" ID=BGER026906-PA|Name=BGER026906-PA 5 Reactome: R-HSA-73863;Reactome: R-HSA-73762;Reactome: R-HSA-427413;Reactome: R-HSA-5250924;Reactome: R-HSA-73772 "RNA Polymerase I Transcription Termination";"RNA Polymerase I Transcription Initiation";"NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Promoter Escape" ID=BGER015538-PA|Name=BGER015538-PA 4 Reactome: R-HSA-400511;Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-381771 "Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)";"Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)" ID=BGER021113-PA|Name=Cathepsin 5 Reactome: R-HSA-2022090;Reactome: R-HSA-1679131;Reactome: R-HSA-2132295;Reactome: R-HSA-6798695;Reactome: R-HSA-1442490 "Assembly of collagen fibrils and other multimeric structures";"Trafficking and processing of endosomal TLR";"MHC class II antigen presentation";"Neutrophil degranulation";"Collagen degradation" ID=BGER002333-PA|Name=BGER002333-PA 5 Reactome: R-HSA-389960;Reactome: R-HSA-390471;Reactome: R-HSA-389957;Reactome: R-HSA-6814122;Reactome: R-HSA-390450 "Formation of tubulin folding intermediates by CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Prefoldin mediated transfer of substrate to CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Folding of actin by CCT/TriC" ID=BGER004015-PA|Name=BGER004015-PA 10 Reactome: R-HSA-2453864;MetaCyc: PWY-7849;MetaCyc: PWY-5691;Reactome: R-HSA-977225;KEGG: 00230+3.5.2.17;Reactome: R-HSA-2453902;Reactome: R-HSA-975634;Reactome: R-HSA-3000171;Reactome: R-HSA-6798695;MetaCyc: PWY-7394 "Retinoid cycle disease events";"Urate conversion to allantoin III";"Urate conversion to allantoin I";"Amyloid fiber formation";"Purine metabolism";"The canonical retinoid cycle in rods (twilight vision)";"Retinoid metabolism and transport";"Non-integrin membrane-ECM interactions";"Neutrophil degranulation";"Urate conversion to allantoin II" ID=BGER023106-PA|Name=BGER023106-PA 10 Reactome: R-HSA-8948751;Reactome: R-HSA-445144;Reactome: R-HSA-8934903;Reactome: R-HSA-6804756;Reactome: R-HSA-1483191;Reactome: R-HSA-201688;Reactome: R-HSA-2514853;Reactome: R-HSA-8939243;Reactome: R-HSA-6798695;Reactome: R-HSA-6814122 "Regulation of PTEN stability and activity";"Signal transduction by L1";"Receptor Mediated Mitophagy";"Regulation of TP53 Activity through Phosphorylation";"Synthesis of PC";"WNT mediated activation of DVL";"Condensation of Prometaphase Chromosomes";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"Neutrophil degranulation";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding" ID=BGER025888-PA|Name=BGER025888-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER027423-PA|Name=BGER027423-PA 4 Reactome: R-HSA-5693554;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693579 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Homologous DNA Pairing and Strand Exchange" ID=BGER008590-PA|Name=BGER008590-PA 13 Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-2408557;Reactome: R-HSA-72689 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits" ID=BGER010048-PA|Name=BGER010048-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER005833-PA|Name=BGER005833-PA 4 Reactome: R-HSA-6781823;Reactome: R-HSA-8856825;Reactome: R-HSA-8951664;Reactome: R-HSA-5696394 "Formation of TC-NER Pre-Incision Complex";"Cargo recognition for clathrin-mediated endocytosis";"Neddylation";"DNA Damage Recognition in GG-NER" ID=BGER028836-PA|Name=BGER028836-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER014008-PA|Name=BGER014008-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER002347-PA|Name=BGER002347-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" ID=BGER020542-PA|Name=BGER020542-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER005429-PA|Name=BGER005429-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER011556-PA|Name=BGER011556-PA 3 Reactome: R-HSA-8866654;Reactome: R-HSA-9603798;Reactome: R-HSA-9033241 "E3 ubiquitin ligases ubiquitinate target proteins";"Class I peroxisomal membrane protein import";"Peroxisomal protein import" ID=BGER025473-PA|Name=BGER025473-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER014637-PA|Name=BGER014637-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-72649;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"Translation initiation complex formation";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER011743-PA|Name=BGER011743-PA 3 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213;Reactome: R-HSA-4420097 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs";"VEGFA-VEGFR2 Pathway" ID=BGER022927-PA|Name=BGER022927-PA 2 Reactome: R-HSA-416482;Reactome: R-HSA-456926 "G alpha (12/13) signalling events";"Thrombin signalling through proteinase activated receptors (PARs)" ID=BGER014713-PA|Name=BGER014713-PA 1 Reactome: R-HSA-3214815 "HDACs deacetylate histones" ID=BGER020708-PA|Name=BGER020708-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER014670-PA|Name=BGER014670-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1799339 "Neutrophil degranulation";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER003860-PA|Name=BGER003860-PA 2 Reactome: R-HSA-1369062;Reactome: R-HSA-9603798 "ABC transporters in lipid homeostasis";"Class I peroxisomal membrane protein import" ID=BGER026494-PA|Name=BGER026494-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER021232-PA|Name=BGER021232-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" ID=BGER012825-PA|Name=BGER012825-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER004987-PA|Name=BGER004987-PA 9 Reactome: R-HSA-68949;Reactome: R-HSA-68827;Reactome: R-HSA-68616;Reactome: R-HSA-113507;Reactome: R-HSA-68867;Reactome: R-HSA-69205;Reactome: R-HSA-68689;Reactome: R-HSA-176187;Reactome: R-HSA-68962 "Orc1 removal from chromatin";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the ORC complex at the origin of replication";"E2F-enabled inhibition of pre-replication complex formation";"Assembly of the pre-replicative complex";"G1/S-Specific Transcription";"CDC6 association with the ORC:origin complex";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex" ID=BGER024328-PA|Name=BGER024328-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" ID=BGER013426-PA|Name=BGER013426-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" ID=BGER018218-PA|Name=BGER018218-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER001382-PA|Name=BGER001382-PA 3 Reactome: R-HSA-1614558;Reactome: R-HSA-1614603;Reactome: R-HSA-2408508 "Degradation of cysteine and homocysteine";"Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se" ID=BGER018126-PA|Name=BGER018126-PA 4 Reactome: R-HSA-912631;Reactome: R-HSA-8875555;Reactome: R-HSA-186763;Reactome: R-HSA-8875656 "Regulation of signaling by CBL";"MET activates RAP1 and RAC1";"Downstream signal transduction";"MET receptor recycling" ID=BGER013158-PA|Name=BGER013158-PA 5 Reactome: R-HSA-975578;KEGG: 00510+2.4.1.68;MetaCyc: PWY-7426;KEGG: 00513+2.4.1.68;KEGG: 00533+2.4.1.68 "Reactions specific to the complex N-glycan synthesis pathway";"N-Glycan biosynthesis";"Complex N-linked glycan biosynthesis (vertebrates)";"Various types of N-glycan biosynthesis";"Glycosaminoglycan biosynthesis - keratan sulfate" ID=BGER027801-PA|Name=BGER027801-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER020814-PA|Name=BGER020814-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER023403-PA|Name=BGER023403-PA 1 Reactome: R-HSA-3295583 "TRP channels" ID=BGER011701-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER014642-PA|Name=BGER014642-PA 7 Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-380270;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380259;Reactome: R-HSA-380284 "AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome" ID=BGER022005-PA|Name=BGER022005-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER003485-PA|Name=BGER003485-PA 2 KEGG: 00260+1.4.4.2;Reactome: R-HSA-6783984 "Glycine, serine and threonine metabolism";"Glycine degradation" ID=BGER020941-PA|Name=BGER020941-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" ID=BGER020923-PA|Name=BGER020923-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902 "SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation" ID=BGER018935-PA|Name=BGER018935-PA 6 Reactome: R-HSA-77387;Reactome: R-HSA-6798695;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556 "Insulin receptor recycling";"Neutrophil degranulation";"Transferrin endocytosis and recycling";"Ion channel transport";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes" ID=BGER017210-PA|Name=BGER017210-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER016821-PA|Name=BGER016821-PA 2 Reactome: R-HSA-6793080;Reactome: R-HSA-2151201 "rRNA modification in the mitochondrion";"Transcriptional activation of mitochondrial biogenesis" ID=BGER017722-PA|Name=BGER017722-PA 5 Reactome: R-HSA-5625740;Reactome: R-HSA-1445148;Reactome: R-HSA-75035;Reactome: R-HSA-111447;Reactome: R-HSA-5628897 "RHO GTPases activate PKNs";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex";"Activation of BAD and translocation to mitochondria";"TP53 Regulates Metabolic Genes" ID=BGER012293-PA|Name=BGER012293-PA 4 Reactome: R-HSA-167160;MetaCyc: PWY-7375;Reactome: R-HSA-72086;Reactome: R-HSA-77075 "RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Mrna capping I";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE" ID=BGER002335-PA|Name=BGER002335-PA 27 Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-3301854;Reactome: R-HSA-170822;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-168271;Reactome: R-HSA-168276;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-180746;Reactome: R-HSA-168333 "SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear Pore Complex (NPC) Disassembly";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"NS1 Mediated Effects on Host Pathways";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery" ID=BGER008647-PA|Name=BGER006514-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER016906-PA|Name=BGER016906-PA 2 KEGG: 00620+3.6.1.7;KEGG: 00627+3.6.1.7 "Pyruvate metabolism";"Aminobenzoate degradation" ID=BGER003912-PA|Name=BGER003912-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "VEGFA-VEGFR2 Pathway";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER013599-PA|Name=BGER013599-PA 5 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858;Reactome: R-HSA-1266695;Reactome: R-HSA-201722;Reactome: R-HSA-3247509 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines";"Interleukin-7 signaling";"Formation of the beta-catenin:TCF transactivating complex";"Chromatin modifying enzymes" ID=BGER005260-PA|Name=BGER005260-PA 6 Reactome: R-HSA-450385;Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450604;Reactome: R-HSA-6791226;Reactome: R-HSA-429958 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"KSRP (KHSRP) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease" ID=BGER001282-PA|Name=BGER001282-PA 16 Reactome: R-HSA-176408;Reactome: R-HSA-8853884;Reactome: R-HSA-2467813;Reactome: R-HSA-174178;Reactome: R-HSA-179409;Reactome: R-HSA-2559582;Reactome: R-HSA-176409;Reactome: R-HSA-176412;Reactome: R-HSA-174184;Reactome: R-HSA-69017;Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-174084;Reactome: R-HSA-174048;Reactome: R-HSA-983168;Reactome: R-HSA-141430 "Regulation of APC/C activators between G1/S and early anaphase";"Transcriptional Regulation by VENTX";"Separation of Sister Chromatids";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A";"Senescence-Associated Secretory Phenotype (SASP)";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Phosphorylation of the APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"CDK-mediated phosphorylation and removal of Cdc6";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Cyclin B";"Antigen processing: Ubiquitination & Proteasome degradation";"Inactivation of APC/C via direct inhibition of the APC/C complex" ID=BGER021784-PA|Name=BGER021784-PA 5 Reactome: R-HSA-1257604;Reactome: R-HSA-5674400;Reactome: R-HSA-5218920;Reactome: R-HSA-389357;Reactome: R-HSA-6804757 "PIP3 activates AKT signaling";"Constitutive Signaling by AKT1 E17K in Cancer";"VEGFR2 mediated vascular permeability";"CD28 dependent PI3K/Akt signaling";"Regulation of TP53 Degradation" ID=BGER000338-PA|Name=BGER000338-PA 2 Reactome: R-HSA-1663150;Reactome: R-HSA-1660662 "The activation of arylsulfatases";"Glycosphingolipid metabolism" ID=BGER025742-PA|Name=BGER025742-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947 "Notch-HLH transcription pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription" ID=BGER009309-PA|Name=BGER009309-PA 1 Reactome: R-HSA-425410 "Metal ion SLC transporters" ID=BGER009090-PA|Name=BGER009090-PA 5 MetaCyc: PWY-6168;Reactome: R-HSA-196843;KEGG: 00740+2.7.1.26;MetaCyc: PWY-5523;MetaCyc: PWY-7863 "Flavin biosynthesis III (fungi)";"Vitamin B2 (riboflavin) metabolism";"Riboflavin metabolism";"5,6-dimethylbenzimidazole biosynthesis I (aerobic)";"Roseoflavin biosynthesis" ID=BGER000923-PA|Name=BGER000923-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER028885-PA|Name=BGER028885-PA 17 Reactome: R-HSA-72689;Reactome: R-HSA-6790901;Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"rRNA modification in the nucleus and cytosol";"Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER005531-PA|Name=BGER005531-PA 2 Reactome: R-HSA-5362517;Reactome: R-HSA-204174 "Signaling by Retinoic Acid";"Regulation of pyruvate dehydrogenase (PDH) complex" ID=BGER018542-PA|Name=BGER018542-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" ID=BGER011872-PA|Name=BGER011872-PA 9 Reactome: R-HSA-9649948;Reactome: R-HSA-5674135;Reactome: R-HSA-6802955;Reactome: R-HSA-445355;Reactome: R-HSA-114608;Reactome: R-HSA-6802952;Reactome: R-HSA-6802946;Reactome: R-HSA-6798695;Reactome: R-HSA-6802948 "Signaling downstream of RAS mutants";"MAP2K and MAPK activation";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Smooth Muscle Contraction";"Platelet degranulation";"Signaling by BRAF and RAF fusions";"Signaling by moderate kinase activity BRAF mutants";"Neutrophil degranulation";"Signaling by high-kinase activity BRAF mutants" ID=BGER019898-PA|Name=BGER019898-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" ID=BGER012616-PA|Name=BGER012616-PA 5 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-8856828;Reactome: R-HSA-6798695;Reactome: R-HSA-3928662 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"Clathrin-mediated endocytosis";"Neutrophil degranulation";"EPHB-mediated forward signaling" ID=BGER018510-PA|Name=BGER018510-PA 2 Reactome: R-HSA-2243919;Reactome: R-HSA-1566948 "Crosslinking of collagen fibrils";"Elastic fibre formation" ID=BGER003142-PA|Name=BGER003142-PA 3 Reactome: R-HSA-373080;Reactome: R-HSA-4086400;Reactome: R-HSA-4608870 "Class B/2 (Secretin family receptors)";"PCP/CE pathway";"Asymmetric localization of PCP proteins" ID=BGER003376-PA|Name=BGER003376-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER015118-PA|Name=BGER015118-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER025714-PA|Name=BGER025714-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" ID=BGER001802-PA|Name=BGER001802-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER029733-PA|Name=BGER029733-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER024247-PA|Name=BGER024247-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER010934-PA|Name=BGER010934-PA 11 KEGG: 00900+5.3.3.2;MetaCyc: PWY-6859;MetaCyc: PWY-7102;MetaCyc: PWY-7560;MetaCyc: PWY-7391;MetaCyc: PWY-5123;MetaCyc: PWY-922;MetaCyc: PWY-6174;MetaCyc: PWY-6383;MetaCyc: PWY-7524;Reactome: R-HSA-191273 "Terpenoid backbone biosynthesis";"All-trans-farnesol biosynthesis";"Bisabolene biosynthesis (engineered)";"Methylerythritol phosphate pathway II";"Isoprene biosynthesis II (engineered)";"Trans, trans-farnesyl diphosphate biosynthesis";"Mevalonate pathway I";"Mevalonate pathway II (archaea)";"Mono-trans, poly-cis decaprenyl phosphate biosynthesis";"Mevalonate pathway III (archaea)";"Cholesterol biosynthesis" ID=BGER001831-PA|Name=BGER001831-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER016568-PA|Name=BGER016568-PA 2 KEGG: 00563+2.4.1.198;Reactome: R-HSA-162710 "Glycosylphosphatidylinositol (GPI)-anchor biosynthesis";"Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER000988-PA|Name=BGER000988-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER017329-PA|Name=BGER017329-PA 56 Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5658442;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-8941858;Reactome: R-HSA-174154;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-195253;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-69601;Reactome: R-HSA-382556;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178 "G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of RAS by GAPs";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RUNX3 expression and activity";"APC/C:Cdc20 mediated degradation of Securin";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of beta-catenin by the destruction complex";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ub-specific processing proteases";"Degradation of DVL";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"UCH proteinases";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"ABC-family proteins mediated transport";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1" ID=BGER020932-PA|Name=BGER020932-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER007935-PA|Name=BGER007935-PA 4 Reactome: R-HSA-73614;KEGG: 00983+2.7.1.48;KEGG: 00240+2.7.1.48;MetaCyc: PWY-7193 "Pyrimidine salvage";"Drug metabolism - other enzymes";"Pyrimidine metabolism";"Pyrimidine ribonucleosides salvage I" ID=BGER015682-PA|Name=BGER015682-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER027971-PA|Name=BGER027971-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER029523-PA|Name=BGER029523-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER029484-PA|Name=BGER029484-PA 6 KEGG: 00564+2.7.1.107;KEGG: 00561+2.7.1.107;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;Reactome: R-HSA-114508;MetaCyc: PWY-7817 "Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Effects of PIP2 hydrolysis";"Type I lipoteichoic acid biosynthesis (S. aureus)" ID=BGER003581-PA|Name=BGER003581-PA 6 KEGG: 05235+3.1.3.16;Reactome: R-HSA-2173788;KEGG: 04660+3.1.3.16;Reactome: R-HSA-163560;KEGG: 04658+3.1.3.16;Reactome: R-HSA-400253 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"Downregulation of TGF-beta receptor signaling";"T cell receptor signaling pathway";"Triglyceride catabolism";"Th1 and Th2 cell differentiation";"Circadian Clock" ID=BGER007155-PA|Name=BGER007155-PA 4 MetaCyc: PWY-5912;KEGG: 00270+2.5.1.6;Reactome: R-HSA-156581;MetaCyc: PWY-5041 "2'-deoxymugineic acid phytosiderophore biosynthesis";"Cysteine and methionine metabolism";"Methylation";"S-adenosyl-L-methionine cycle II" ID=BGER002485-PA|Name=BGER002485-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER004532-PA|Name=BGER004532-PA 14 MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7619;Reactome: R-HSA-75876;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433 "Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Juniperonate biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Fatty acid elongation";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)" ID=BGER008608-PA|Name=BGER008608-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" ID=BGER017537-PA|Name=BGER017537-PA 3 KEGG: 00230+3.6.1.17;Reactome: R-HSA-3299685;KEGG: 00240+3.6.1.17 "Purine metabolism";"Detoxification of Reactive Oxygen Species";"Pyrimidine metabolism" ID=BGER016165-PA|Name=BGER016165-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER029673-PA|Name=BGER029673-PA 1 Reactome: R-HSA-71262 "Carnitine synthesis" ID=BGER001351-PA|Name=BGER001351-PA 3 Reactome: R-HSA-8874081;Reactome: R-HSA-3000171;Reactome: R-HSA-3000157 "MET activates PTK2 signaling";"Non-integrin membrane-ECM interactions";"Laminin interactions" ID=BGER002717-PA|Name=BGER002717-PA 3 Reactome: R-HSA-5696395;Reactome: R-HSA-5689877;Reactome: R-HSA-5696394 "Formation of Incision Complex in GG-NER";"Josephin domain DUBs";"DNA Damage Recognition in GG-NER" ID=BGER022289-PA|Name=BGER022289-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER022342-PA|Name=BGER022342-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" ID=BGER018714-PA|Name=BGER018714-PA 24 Reactome: R-HSA-5625740;Reactome: R-HSA-5218920;Reactome: R-HSA-6804757;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-5607764;Reactome: R-HSA-354192;Reactome: R-HSA-392451;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-9634635;Reactome: R-HSA-2871837;Reactome: R-HSA-444257;Reactome: R-HSA-389357;Reactome: R-HSA-165158;KEGG: 04150+2.7.11.1;Reactome: R-HSA-2730905;KEGG: 04151+2.7.11.1;Reactome: R-HSA-202424;Reactome: R-HSA-5218921;Reactome: R-HSA-1257604;Reactome: R-HSA-5674400;Reactome: R-HSA-114604 "RHO GTPases activate PKNs";"VEGFR2 mediated vascular permeability";"Regulation of TP53 Degradation";"Thermogenesis";"Relaxin signaling pathway";"CLEC7A (Dectin-1) signaling";"Integrin signaling";"G beta:gamma signalling through PI3Kgamma";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection";"Estrogen-stimulated signaling through PRKCZ";"FCERI mediated NF-kB activation";"RSK activation";"CD28 dependent PI3K/Akt signaling";"Activation of AKT2";"mTOR signaling pathway";"Role of LAT2/NTAL/LAB on calcium mobilization";"PI3K-Akt signaling pathway";"Downstream TCR signaling";"VEGFR2 mediated cell proliferation";"PIP3 activates AKT signaling";"Constitutive Signaling by AKT1 E17K in Cancer";"GPVI-mediated activation cascade" ID=BGER015549-PA|Name=BGER015549-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" ID=BGER025710-PA|Name=BGER025710-PA 3 MetaCyc: PWY-6700;Reactome: R-HSA-6782315;MetaCyc: PWY-8106 "Queuosine biosynthesis I (de novo)";"tRNA modification in the nucleus and cytosol";"Queuosine biosynthesis III (queuosine salvage)" ID=BGER025227-PA|Name=BGER025227-PA 11 Reactome: R-HSA-69166;Reactome: R-HSA-5693554;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-69473;Reactome: R-HSA-5693607;Reactome: R-HSA-174437;Reactome: R-HSA-5693579;Reactome: R-HSA-6804756 "Removal of the Flap Intermediate";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"G2/M DNA damage checkpoint";"Processing of DNA double-strand break ends";"Removal of the Flap Intermediate from the C-strand";"Homologous DNA Pairing and Strand Exchange";"Regulation of TP53 Activity through Phosphorylation" ID=BGER018951-PA|Name=BGER018951-PA 4 Reactome: R-HSA-72731;KEGG: 00270+5.3.1.23;MetaCyc: PWY-4361;MetaCyc: PWY-7174 "Recycling of eIF2:GDP";"Cysteine and methionine metabolism";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II" ID=BGER026284-PA|Name=BGER026284-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER027987-PA|Name=BGER027987-PA 6 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841;Reactome: R-HSA-5617472;Reactome: R-HSA-8951664;Reactome: R-HSA-3769402;Reactome: R-HSA-201722 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Neddylation";"Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER016963-PA|Name=BGER016963-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER017861-PA|Name=BGER017861-PA 6 Reactome: R-HSA-4641265;Reactome: R-HSA-4086398;Reactome: R-HSA-8951430;Reactome: R-HSA-3769402;Reactome: R-HSA-4411364;Reactome: R-HSA-201722 "Repression of WNT target genes";"Ca2+ pathway";"RUNX3 regulates WNT signaling";"Deactivation of the beta-catenin transactivating complex";"Binding of TCF/LEF:CTNNB1 to target gene promoters";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER016256-PA|Name=BGER016256-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER008792-PA|Name=BGER008792-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER029049-PA|Name=BGER029049-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" ID=BGER027761-PA|Name=BGER027761-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER009445-PA|Name=BGER009445-PA 1 Reactome: R-HSA-1445148 "Translocation of SLC2A4 (GLUT4) to the plasma membrane" ID=BGER015453-PA|Name=BGER015453-PA 2 Reactome: R-HSA-174403;Reactome: R-HSA-5578999 "Glutathione synthesis and recycling";"Defective GCLC causes Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (HAGGSD)" ID=BGER027293-PA|Name=BGER027293-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER007816-PA|Name=BGER007816-PA 9 KEGG: 00531+3.2.1.52;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00513+3.2.1.52;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.52;MetaCyc: PWY-7822 "Glycosaminoglycan degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Various types of N-glycan biosynthesis";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation III (Serratia)" ID=BGER016398-PA|Name=BGER016398-PA 1 Reactome: R-HSA-427652 "Sodium-coupled phosphate cotransporters" ID=BGER029367-PA|Name=BGER029367-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER021012-PA|Name=BGER021012-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER017535-PA|Name=BGER017535-PA 1 Reactome: R-HSA-381753 "Olfactory Signaling Pathway" ID=BGER012300-PA|Name=BGER012300-PA 2 Reactome: R-HSA-201722;Reactome: R-HSA-171319 "Formation of the beta-catenin:TCF transactivating complex";"Telomere Extension By Telomerase" ID=BGER004173-PA|Name=BGER004173-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER012732-PA|Name=BGER012732-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER003375-PA|Name=BGER003375-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER012772-PA|Name=BGER012772-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" ID=BGER027879-PA|Name=BGER027879-PA 7 Reactome: R-HSA-71336;MetaCyc: PWY-6855;MetaCyc: PWY-6906;KEGG: 00030+3.1.1.31;MetaCyc: PWY-5514;MetaCyc: PWY-8004;KEGG: 00520+3.5.99.6 "Pentose phosphate pathway";"Chitin degradation I (archaea)";"Chitin derivatives degradation";"Pentose phosphate pathway";"UDP-N-acetyl-D-galactosamine biosynthesis II";"Entner-Doudoroff pathway I";"Amino sugar and nucleotide sugar metabolism" ID=BGER015530-PA|Name=BGER015530-PA 5 MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109;KEGG: 00514+2.4.1.109;MetaCyc: PWY-7979;MetaCyc: PWY-7922 "Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis";"Other types of O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Protein O-mannosylation II (mammals, core M1 and core M2)" ID=BGER025691-PA|Name=BGER025691-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-72702 "Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition" ID=BGER017967-PA|Name=BGER017967-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER014173-PA|Name=BGER014173-PA 1 Reactome: R-HSA-196783 "Coenzyme A biosynthesis" ID=BGER014648-PA|Name=BGER014648-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" ID=BGER029004-PA|Name=BGER029004-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-5884;Reactome: R-HSA-9640463;MetaCyc: PWY-7782;MetaCyc: PWY-6733 "Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis" ID=BGER008444-PA|Name=BGER008444-PA 5 KEGG: 00020+4.2.1.3;KEGG: 00720+4.2.1.3;KEGG: 00290+4.2.1.33;Reactome: R-HSA-917937;KEGG: 00630+4.2.1.3 "Citrate cycle (TCA cycle)";"Carbon fixation pathways in prokaryotes";"Valine, leucine and isoleucine biosynthesis";"Iron uptake and transport";"Glyoxylate and dicarboxylate metabolism" ID=BGER027090-PA|Name=BGER027090-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER022458-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER012144-PA|Name=BGER012144-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER026257-PA|Name=BGER026257-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018952-PA|Name=BGER018952-PA 8 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68689;Reactome: R-HSA-68867;Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68616;Reactome: R-HSA-68827 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"CDC6 association with the ORC:origin complex";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"Assembly of the ORC complex at the origin of replication";"CDT1 association with the CDC6:ORC:origin complex" ID=BGER014586-PA|Name=BGER014586-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER004964-PA|Name=BGER004964-PA 4 Reactome: R-HSA-975871;Reactome: R-HSA-5603037;Reactome: R-HSA-168176;Reactome: R-HSA-5602680 "MyD88 cascade initiated on plasma membrane";"IRAK4 deficiency (TLR5)";"Toll Like Receptor 5 (TLR5) Cascade";"MyD88 deficiency (TLR5)" ID=BGER029245-PA|Name=BGER029245-PA 2 Reactome: R-HSA-422356;Reactome: R-HSA-112308 "Regulation of insulin secretion";"Presynaptic depolarization and calcium channel opening" ID=BGER019580-PA|Name=BGER019580-PA 1 Reactome: R-HSA-4551638 "SUMOylation of chromatin organization proteins" ID=BGER010727-PA|Name=BGER010727-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" ID=BGER002681-PA|Name=BGER002681-PA 1 Reactome: R-HSA-532668 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle" ID=BGER009993-PA|Name=BGER009993-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER026074-PA|Name=BGER026074-PA 2 MetaCyc: PWY-7800;MetaCyc: PWY-7799 "Ac/N-end rule pathway";"Arg/N-end rule pathway (eukaryotic)" ID=BGER029668-PA|Name=BGER029668-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER010222-PA|Name=BGER010222-PA 16 Reactome: R-HSA-141430;Reactome: R-HSA-983168;Reactome: R-HSA-174048;Reactome: R-HSA-174084;Reactome: R-HSA-174154;Reactome: R-HSA-176407;Reactome: R-HSA-174184;Reactome: R-HSA-176412;Reactome: R-HSA-69017;Reactome: R-HSA-176409;Reactome: R-HSA-2559582;Reactome: R-HSA-179409;Reactome: R-HSA-174178;Reactome: R-HSA-2467813;Reactome: R-HSA-8853884;Reactome: R-HSA-176408 "Inactivation of APC/C via direct inhibition of the APC/C complex";"Antigen processing: Ubiquitination & Proteasome degradation";"APC/C:Cdc20 mediated degradation of Cyclin B";"Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Securin";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Phosphorylation of the APC/C";"CDK-mediated phosphorylation and removal of Cdc6";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Senescence-Associated Secretory Phenotype (SASP)";"APC-Cdc20 mediated degradation of Nek2A";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Separation of Sister Chromatids";"Transcriptional Regulation by VENTX";"Regulation of APC/C activators between G1/S and early anaphase" ID=BGER027548-PA|Name=BGER027548-PA 33 Reactome: R-HSA-9648025;Reactome: R-HSA-9610379;Reactome: R-HSA-141444;Reactome: R-HSA-168276;Reactome: R-HSA-168271;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168325;Reactome: R-HSA-5663220;Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-68877;Reactome: R-HSA-170822;Reactome: R-HSA-5578749;Reactome: R-HSA-159227;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-168333;Reactome: R-HSA-180746;Reactome: R-HSA-2500257;Reactome: R-HSA-180910;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-2467813;Reactome: R-HSA-159230;Reactome: R-HSA-3301854;Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-4615885;Reactome: R-HSA-9609690;Reactome: R-HSA-1169408 "EML4 and NUDC in mitotic spindle formation";"HCMV Late Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"NS1 Mediated Effects on Host Pathways";"Transport of Ribonucleoproteins into the Host Nucleus";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Viral Messenger RNA Synthesis";"RHO GTPases Activate Formins";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Mitotic Prometaphase";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transcriptional regulation by small RNAs";"Transport of the SLBP independent Mature mRNA";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"Nuclear import of Rev protein";"Resolution of Sister Chromatid Cohesion";"Vpr-mediated nuclear import of PICs";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Separation of Sister Chromatids";"Transport of the SLBP Dependant Mature mRNA";"Nuclear Pore Complex (NPC) Disassembly";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"SUMOylation of DNA replication proteins";"HCMV Early Events";"ISG15 antiviral mechanism" ID=BGER022724-PA|Name=BGER022724-PA 2 KEGG: 00970+6.1.1.20;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" ID=BGER024792-PA|Name=BGER024792-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695;Reactome: R-HSA-3299685;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6 "Glyoxylate and dicarboxylate metabolism";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation";"Detoxification of Reactive Oxygen Species";"Peroxisomal protein import";"Tryptophan metabolism" ID=BGER022413-PA|Name=BGER022413-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" ID=BGER018078-PA|Name=BGER018078-PA 3 MetaCyc: PWY-7546;MetaCyc: PWY-6482;Reactome: R-HSA-5358493 "Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)";"Synthesis of diphthamide-EEF2" ID=BGER027414-PA|Name=BGER027414-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" ID=BGER009670-PA|Name=BGER009670-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" ID=BGER011749-PA|Name=BGER011749-PA 2 Reactome: R-HSA-975577;Reactome: R-HSA-2022854 "N-Glycan antennae elongation";"Keratan sulfate biosynthesis" ID=BGER011779-PA|Name=BGER011779-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER018870-PA|Name=BGER018870-PA 52 Reactome: R-HSA-76061;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-1834949;Reactome: R-HSA-203927;Reactome: R-HSA-8851708;Reactome: R-HSA-73762;Reactome: R-HSA-75953;Reactome: R-HSA-73780;Reactome: R-HSA-6781827;Reactome: R-HSA-9018519;Reactome: R-HSA-75955;Reactome: R-HSA-76071;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210;Reactome: R-HSA-73980;Reactome: R-HSA-113418;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-749476;Reactome: R-HSA-77075;Reactome: R-HSA-5617472;Reactome: R-HSA-167162;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-5578749;Reactome: R-HSA-72165;Reactome: R-HSA-5250924;Reactome: R-HSA-167242;Reactome: R-HSA-72203;Reactome: R-HSA-674695;Reactome: R-HSA-5601884;Reactome: R-HSA-427413;Reactome: R-HSA-76066;Reactome: R-HSA-167243;Reactome: R-HSA-6803529;Reactome: R-HSA-167172;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-168325;Reactome: R-HSA-72163;Reactome: R-HSA-73863;Reactome: R-HSA-167161;Reactome: R-HSA-73772;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-167290 "RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Cytosolic sensors of pathogen-associated DNA";"MicroRNA (miRNA) biogenesis";"Signaling by FGFR2 IIIa TM";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase III Chain Elongation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Elongation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase III Transcription Termination";"Formation of the Early Elongation Complex";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Pol II CTD phosphorylation and interaction with CE";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"RNA Polymerase II HIV Promoter Escape";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Transcriptional regulation by small RNAs";"mRNA Splicing - Minor Pathway";"B-WICH complex positively regulates rRNA expression";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Processing of Capped Intron-Containing Pre-mRNA";"RNA Polymerase II Pre-transcription Events";"PIWI-interacting RNA (piRNA) biogenesis";"NoRC negatively regulates rRNA expression";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Tat-mediated HIV elongation arrest and recovery";"FGFR2 alternative splicing";"Transcription of the HIV genome";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Viral Messenger RNA Synthesis";"mRNA Splicing - Major Pathway";"RNA Polymerase I Transcription Termination";"HIV Transcription Initiation";"RNA Polymerase I Promoter Escape";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Pausing and recovery of HIV elongation" ID=BGER025579-PA|Name=BGER025579-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER011667-PA|Name=BGER011667-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878 "Intra-Golgi traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport" ID=BGER027064-PA|Name=BGER027064-PA 6 MetaCyc: PWY-5269;Reactome: R-HSA-1483166;Reactome: R-HSA-1483148;MetaCyc: PWY-5668;MetaCyc: PWY-7817;KEGG: 00564+2.7.8.5 "Cardiolipin biosynthesis II";"Synthesis of PA";"Synthesis of PG";"Cardiolipin biosynthesis I";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism" ID=BGER025498-PA|Name=BGER025498-PA 1 Reactome: R-HSA-73621 "Pyrimidine catabolism" ID=BGER011046-PA|Name=BGER011046-PA 1 Reactome: R-HSA-9033241 "Peroxisomal protein import" ID=BGER010474-PA|Name=BGER010474-PA 8 KEGG: 00380+3.5.1.9;MetaCyc: PWY-7765;MetaCyc: PWY-7717;MetaCyc: PWY-7734;MetaCyc: PWY-6309;MetaCyc: PWY-7733;KEGG: 00630+3.5.1.9;MetaCyc: PWY-5651 "Tryptophan metabolism";"3-hydroxy-4-methyl-anthranilate biosynthesis II";"3-hydroxy-4-methyl-anthranilate biosynthesis I";"Quinoxaline-2-carboxylate biosynthesis";"L-tryptophan degradation XI (mammalian, via kynurenine)";"3-hydroxyquinaldate biosynthesis";"Glyoxylate and dicarboxylate metabolism";"L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde" ID=BGER010212-PA|Name=BGER010212-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER004560-PA|Name=BGER004560-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER000727-PA|Name=BGER000727-PA 1 Reactome: R-HSA-429958 "mRNA decay by 3' to 5' exoribonuclease" ID=BGER010049-PA|Name=BGER010049-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER026034-PA|Name=BGER026034-PA 18 Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-167200;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167152;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6796648;Reactome: R-HSA-72086;Reactome: R-HSA-112382;Reactome: R-HSA-75955;Reactome: R-HSA-167242;Reactome: R-HSA-674695 "Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes";"mRNA Capping";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Transcription Elongation";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Pre-transcription Events" ID=BGER026730-PA|Name=BGER026730-PA 6 MetaCyc: PWY-5067;MetaCyc: PWY-622;MetaCyc: PWY-7900;Reactome: R-HSA-189085;KEGG: 00500+3.2.1.1;KEGG: 00500+2.4.1.18 "Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch biosynthesis";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Digestion of dietary carbohydrate";"Starch and sucrose metabolism";"Starch and sucrose metabolism" ID=BGER011509-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER013732-PA|Name=BGER013732-PA 6 Reactome: R-HSA-1855183;KEGG: 00562+3.1.3.36;KEGG: 04070+3.1.3.36;Reactome: R-HSA-1855204;Reactome: R-HSA-194840;MetaCyc: PWY-6368 "Synthesis of IP2, IP, and Ins in the cytosol";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Synthesis of IP3 and IP4 in the cytosol";"Rho GTPase cycle";"3-phosphoinositide degradation" ID=BGER021942-PA|Name=BGER021942-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER001660-PA|Name=BGER001660-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER000091-PA|Name=BGER000091-PA 18 MetaCyc: PWY-7783;Reactome: R-HSA-1482922;Reactome: R-HSA-1483166;Reactome: R-HSA-1482925;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;MetaCyc: PWY-7417;KEGG: 00565+3.1.1.4;MetaCyc: PWY-7409;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482839;KEGG: 00591+3.1.1.4;MetaCyc: PWY-8053;MetaCyc: PWY-7416;Reactome: R-HSA-1482788;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482801;MetaCyc: PWY-8051 "Plasmalogen degradation";"Acyl chain remodelling of PI";"Synthesis of PA";"Acyl chain remodelling of PG";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Phospholipid remodeling (phosphatidate, yeast)";"Ether lipid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PE";"Linoleic acid metabolism";"Anandamide biosynthesis II";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Acyl chain remodelling of PC";"Arachidonic acid metabolism";"Acyl chain remodelling of PS";"Anandamide biosynthesis I" ID=BGER029354-PA|Name=BGER029354-PA 1 Reactome: R-HSA-977225 "Amyloid fiber formation" ID=BGER007775-PA|Name=BGER007775-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-1268020 "Respiratory electron transport";"Mitochondrial protein import" ID=BGER005831-PA|Name=BGER005831-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER020748-PA|Name=BGER020748-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER018004-PA|Name=BGER018004-PA 4 Reactome: R-HSA-5362768;Reactome: R-HSA-382556;Reactome: R-HSA-5678895;Reactome: R-HSA-5358346 "Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis";"Hedgehog ligand biogenesis" ID=BGER001774-PA|Name=BGER001774-PA 3 Reactome: R-HSA-1614603;Reactome: R-HSA-2408508;Reactome: R-HSA-1614558 "Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se";"Degradation of cysteine and homocysteine" ID=BGER009306-PA|Name=BGER009306-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER003783-PA|Name=BGER003783-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER005224-PA|Name=BGER005224-PA 1 KEGG: 00970+6.1.1.16 "Aminoacyl-tRNA biosynthesis" ID=BGER024949-PA|Name=BGER024949-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER020459-PA|Name=BGER020459-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-71403 "Respiratory electron transport";"Citric acid cycle (TCA cycle)" ID=BGER004806-PA|Name=BGER004806-PA 2 Reactome: R-HSA-156581;Reactome: R-HSA-5689880 "Methylation";"Ub-specific processing proteases" ID=BGER008290-PA|Name=BGER008290-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER024645-PA|Name=BGER024645-PA 3 MetaCyc: PWY-7158;MetaCyc: PWY-8099;KEGG: 00790+4.2.1.96 "L-phenylalanine degradation V";"Tetrahydropteridine recycling";"Folate biosynthesis" ID=BGER009178-PA|Name=BGER009178-PA 3 Reactome: R-HSA-480985;Reactome: R-HSA-913709;KEGG: 00510+2.4.1.117 "Synthesis of dolichyl-phosphate-glucose";"O-linked glycosylation of mucins";"N-Glycan biosynthesis" ID=BGER016000-PA|Name=BGER016000-PA 6 Reactome: R-HSA-5609978;Reactome: R-HSA-70370;KEGG: 00052+2.7.7.12;KEGG: 00520+2.7.7.12;MetaCyc: PWY-6317;MetaCyc: PWY-6527 "Defective GALT can cause Galactosemia";"Galactose catabolism";"Galactose metabolism";"Amino sugar and nucleotide sugar metabolism";"D-galactose degradation I (Leloir pathway)";"Stachyose degradation" ID=BGER013324-PA|Name=BGER013324-PA 4 KEGG: 00510+2.4.1.131;Reactome: R-HSA-4551295;KEGG: 00513+2.4.1.131;Reactome: R-HSA-446193 "N-Glycan biosynthesis";"Defective ALG11 causes ALG11-CDG (CDG-1p)";"Various types of N-glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" ID=BGER020373-PA|Name=BGER020373-PA 1 Reactome: R-HSA-532668 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle" ID=BGER022751-PA|Name=BGER022751-PA 8 Reactome: R-HSA-380972;Reactome: R-HSA-6798695;Reactome: R-HSA-165159;Reactome: R-HSA-8943724;Reactome: R-HSA-9639288;Reactome: R-HSA-166208;Reactome: R-HSA-1632852;Reactome: R-HSA-5628897 "Energy dependent regulation of mTOR by LKB1-AMPK";"Neutrophil degranulation";"mTOR signalling";"Regulation of PTEN gene transcription";"Amino acids regulate mTORC1";"mTORC1-mediated signalling";"Macroautophagy";"TP53 Regulates Metabolic Genes" ID=BGER021947-PA|Name=BGER021947-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" ID=BGER008999-PA|Name=BGER008999-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER011264-PA|Name=BGER011264-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER001813-PA|Name=BGER001813-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway" ID=BGER009335-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER015073-PA|Name=BGER015073-PA 4 MetaCyc: PWY-5737;Reactome: R-HSA-70688;MetaCyc: PWY-6922;KEGG: 00330+1.5.5.2 "(5R)-carbapenem carboxylate biosynthesis";"Proline catabolism";"L-Ndelta-acetylornithine biosynthesis";"Arginine and proline metabolism" ID=BGER017948-PA|Name=BGER017948-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER023964-PA|Name=BGER023964-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-611105 "Citric acid cycle (TCA cycle)";"Respiratory electron transport" ID=BGER005612-PA|Name=BGER005612-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" ID=BGER000452-PA|Name=BGER000452-PA 3 Reactome: R-HSA-72165;Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" ID=BGER017032-PA|Name=BGER017032-PA 2 Reactome: R-HSA-6803157;Reactome: R-HSA-6798695 "Antimicrobial peptides";"Neutrophil degranulation" ID=BGER016203-PA|Name=BGER016203-PA 1 Reactome: R-HSA-71262 "Carnitine synthesis" ID=BGER007652-PA|Name=BGER007652-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER023831-PA|Name=BGER023831-PA 57 Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-5610780;Reactome: R-HSA-69481;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-5607761;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603 "Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Degradation of GLI1 by the proteasome";"G2/M Checkpoints";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Neutrophil degranulation";"Degradation of AXIN";"Separation of Sister Chromatids";"Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"UCH proteinases" ID=BGER014879-PA|Name=BGER014879-PA 2 Reactome: R-HSA-445095;Reactome: R-HSA-6807878 "Interaction between L1 and Ankyrins";"COPI-mediated anterograde transport" ID=BGER006760-PA|Name=BGER006760-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER002914-PA|Name=BGER002914-PA 1 Reactome: R-HSA-388844 "Receptor-type tyrosine-protein phosphatases" ID=BGER008631-PA|Name=BGER008631-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER020951-PA|Name=BGER020951-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER002772-PA|Name=BGER002772-PA 7 KEGG: 04070+3.1.4.11;MetaCyc: PWY-8052;MetaCyc: PWY-6351;Reactome: R-HSA-1855204;MetaCyc: PWY-7039;KEGG: 00562+3.1.4.11;MetaCyc: PWY-6367 "Phosphatidylinositol signaling system";"2-arachidonoylglycerol biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"Phosphatidate metabolism, as a signaling molecule";"Inositol phosphate metabolism";"D-myo-inositol-5-phosphate metabolism" ID=BGER005006-PA|Name=BGER005006-PA 6 Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210;Reactome: R-HSA-6782135;Reactome: R-HSA-6781827;Reactome: R-HSA-6798695 "Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Dual incision in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Neutrophil degranulation" ID=BGER009829-PA|Name=BGER009829-PA 27 Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-159236;Reactome: R-HSA-3301854;Reactome: R-HSA-170822;Reactome: R-HSA-159230;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-4570464;Reactome: R-HSA-6784531;Reactome: R-HSA-3108214;Reactome: R-HSA-3232142;Reactome: R-HSA-168271;Reactome: R-HSA-168276;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-180746;Reactome: R-HSA-168333 "SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear Pore Complex (NPC) Disassembly";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"SUMOylation of RNA binding proteins";"tRNA processing in the nucleus";"SUMOylation of DNA damage response and repair proteins";"SUMOylation of ubiquitinylation proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"NS1 Mediated Effects on Host Pathways";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery" ID=BGER028152-PA|Name=BGER028152-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" ID=BGER003091-PA|Name=BGER003091-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER016051-PA|Name=BGER016051-PA 5 Reactome: R-HSA-380994;Reactome: R-HSA-1989781;Reactome: R-HSA-2426168;Reactome: R-HSA-9614657;Reactome: R-HSA-381183 "ATF4 activates genes in response to endoplasmic reticulum stress";"PPARA activates gene expression";"Activation of gene expression by SREBF (SREBP)";"FOXO-mediated transcription of cell death genes";"ATF6 (ATF6-alpha) activates chaperone genes" ID=BGER028311-PA|Name=BGER028311-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER015901-PA|Name=BGER015901-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER005840-PA|Name=BGER005840-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER019398-PA|Name=BGER019398-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" ID=BGER024198-PA|Name=BGER024198-PA 5 Reactome: R-HSA-917937;Reactome: R-HSA-5619060;Reactome: R-HSA-425410;Reactome: R-HSA-5655799;Reactome: R-HSA-5619049 "Iron uptake and transport";"Defective CP causes aceruloplasminemia (ACERULOP)";"Metal ion SLC transporters";"Defective SLC40A1 causes hemochromatosis 4 (HFE4) (duodenum)";"Defective SLC40A1 causes hemochromatosis 4 (HFE4) (macrophages)" ID=BGER011640-PA|Name=BGER011640-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER017493-PA|Name=BGER017493-PA 5 Reactome: R-HSA-209560;Reactome: R-HSA-209543;Reactome: R-HSA-5205685;Reactome: R-HSA-9020702;Reactome: R-HSA-205043 "NF-kB is activated and signals survival";"p75NTR recruits signalling complexes";"Pink/Parkin Mediated Mitophagy";"Interleukin-1 signaling";"NRIF signals cell death from the nucleus" ID=BGER007156-PA|Name=BGER007156-PA 3 MetaCyc: PWY-7799;MetaCyc: PWY-7800;Reactome: R-HSA-2514859 "Arg/N-end rule pathway (eukaryotic)";"Ac/N-end rule pathway";"Inactivation, recovery and regulation of the phototransduction cascade" ID=BGER000922-PA|Name=BGER000922-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER022570-PA|Name=BGER022570-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "VEGFA-VEGFR2 Pathway";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" ID=BGER002404-PA|Name=BGER002404-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878 "Intra-Golgi traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport" ID=BGER017807-PA|Name=BGER017807-PA 16 Reactome: R-HSA-674695;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-75955;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-1234176;Reactome: R-HSA-167246;Reactome: R-HSA-180585;Reactome: R-HSA-167238;Reactome: R-HSA-167200;Reactome: R-HSA-167290;Reactome: R-HSA-167152;Reactome: R-HSA-167287;Reactome: R-HSA-9010553;Reactome: R-HSA-167243 "RNA Polymerase II Pre-transcription Events";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"RNA Polymerase II Transcription Elongation";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Tat-mediated elongation of the HIV-1 transcript";"Vif-mediated degradation of APOBEC3G";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of HIV elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"HIV elongation arrest and recovery";"Regulation of expression of SLITs and ROBOs";"Tat-mediated HIV elongation arrest and recovery" ID=BGER009046-PA|Name=BGER009046-PA 8 Reactome: R-HSA-167590;Reactome: R-HSA-9639288;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-9636467;Reactome: R-HSA-77387;Reactome: R-HSA-182218;Reactome: R-HSA-983712 "Nef Mediated CD4 Down-regulation";"Amino acids regulate mTORC1";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Blockage of phagosome acidification";"Insulin receptor recycling";"Nef Mediated CD8 Down-regulation";"Ion channel transport" ID=BGER004452-PA|Name=BGER004452-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER011824-PA|Name=BGER011824-PA 3 KEGG: 00260+2.1.2.10;KEGG: 00670+2.1.2.10;Reactome: R-HSA-6783984 "Glycine, serine and threonine metabolism";"One carbon pool by folate";"Glycine degradation" ID=BGER014068-PA|Name=BGER014068-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER013577-PA|Name=BGER013577-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER016164-PA|Name=BGER016164-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER019899-PA|Name=BGER019899-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" ID=BGER000931-PA|Name=BGER000931-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER003934-PA|Name=BGER003934-PA 7 Reactome: R-HSA-3108214;Reactome: R-HSA-5696394;Reactome: R-HSA-2173795;Reactome: R-HSA-5685939;Reactome: R-HSA-5696395;Reactome: R-HSA-5696400;Reactome: R-HSA-110362 "SUMOylation of DNA damage response and repair proteins";"DNA Damage Recognition in GG-NER";"Downregulation of SMAD2/3:SMAD4 transcriptional activity";"HDR through MMEJ (alt-NHEJ)";"Formation of Incision Complex in GG-NER";"Dual Incision in GG-NER";"POLB-Dependent Long Patch Base Excision Repair" ID=BGER013799-PA|Name=BGER013799-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER008065-PA|Name=BGER008065-PA 1 Reactome: R-HSA-426486 "Small interfering RNA (siRNA) biogenesis" ID=BGER012742-PA|Name=BGER012742-PA 4 Reactome: R-HSA-3214847;MetaCyc: PWY-7437;Reactome: R-HSA-5689603;KEGG: 00514+2.4.1.255 "HATs acetylate histones";"Protein O-[N-acetyl]-glucosylation";"UCH proteinases";"Other types of O-glycan biosynthesis" ID=BGER006873-PA|Name=BGER006873-PA 17 Reactome: R-HSA-166058;Reactome: R-HSA-5603037;Reactome: R-HSA-1257604;Reactome: R-HSA-975871;Reactome: R-HSA-209543;Reactome: R-HSA-5602680;Reactome: R-HSA-9020702;Reactome: R-HSA-3134963;Reactome: R-HSA-5603041;Reactome: R-HSA-6783310;Reactome: R-HSA-1236974;Reactome: R-HSA-975110;Reactome: R-HSA-975138;Reactome: R-HSA-5602498;Reactome: R-HSA-975155;Reactome: R-HSA-6811558;Reactome: R-HSA-1810476 "MyD88:MAL(TIRAP) cascade initiated on plasma membrane";"IRAK4 deficiency (TLR5)";"PIP3 activates AKT signaling";"MyD88 cascade initiated on plasma membrane";"p75NTR recruits signalling complexes";"MyD88 deficiency (TLR5)";"Interleukin-1 signaling";"DEx/H-box helicases activate type I IFN and inflammatory cytokines production";"IRAK4 deficiency (TLR2/4)";"Fanconi Anemia Pathway";"ER-Phagosome pathway";"TRAF6 mediated IRF7 activation in TLR7/8 or 9 signaling";"TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation";"MyD88 deficiency (TLR2/4)";"MyD88 dependent cascade initiated on endosome";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"RIP-mediated NFkB activation via ZBP1" ID=BGER017592-PA|Name=BGER017592-PA 14 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-2022377;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Metabolism of Angiotensinogen to Angiotensins";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Selenocysteine synthesis" ID=BGER007815-PA|Name=BGER007815-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER003653-PA|Name=BGER003653-PA 2 Reactome: R-HSA-70263;Reactome: R-HSA-70171 "Gluconeogenesis";"Glycolysis" ID=BGER011463-PA|Name=BGER011463-PA 1 Reactome: R-HSA-4419969 "Depolymerisation of the Nuclear Lamina" ID=BGER029677-PA|Name=BGER029677-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER010424-PA|Name=BGER010424-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER029370-PA|Name=BGER029370-PA 12 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-6811436;Reactome: R-HSA-9646399;Reactome: R-HSA-3371497;Reactome: R-HSA-141444;Reactome: R-HSA-6807878;Reactome: R-HSA-9609690;Reactome: R-HSA-5663220;Reactome: R-HSA-2132295;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"COPI-independent Golgi-to-ER retrograde traffic";"Aggrephagy";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"COPI-mediated anterograde transport";"HCMV Early Events";"RHO GTPases Activate Formins";"MHC class II antigen presentation";"Separation of Sister Chromatids" ID=BGER014313-PA|Name=BGER014313-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER015576-PA|Name=BGER015576-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER008751-PA|Name=BGER008751-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER001659-PA|Name=BGER001659-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER003231-PA|Name=BGER003231-PA 1 KEGG: 00970+6.1.1.16 "Aminoacyl-tRNA biosynthesis" ID=BGER021339-PA|Name=BGER021339-PA 15 MetaCyc: PWY-5723;MetaCyc: PWY-6886;MetaCyc: PWY-8004;Reactome: R-HSA-70171;MetaCyc: PWY-7218;MetaCyc: PWY-7383;KEGG: 00010+2.7.1.40;MetaCyc: PWY-1042;MetaCyc: PWY-6901;KEGG: 00620+2.7.1.40;MetaCyc: PWY-7003;MetaCyc: PWY-5484;MetaCyc: PWY-6142;MetaCyc: PWY-2221;KEGG: 00230+2.7.1.40 "Rubisco shunt";"1-butanol autotrophic biosynthesis (engineered)";"Entner-Doudoroff pathway I";"Glycolysis";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Glycolysis / Gluconeogenesis";"Glycolysis IV (plant cytosol)";"Superpathway of glucose and xylose degradation";"Pyruvate metabolism";"Glycerol degradation to butanol";"Glycolysis II (from fructose 6-phosphate)";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Purine metabolism" ID=BGER017800-PA|Name=BGER017800-PA 1 Reactome: R-HSA-211981 "Xenobiotics" ID=BGER013157-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER026225-PA|Name=BGER026225-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER008520-PA|Name=BGER008520-PA 3 KEGG: 00790+3.1.3.1;KEGG: 00730+3.1.3.1;MetaCyc: PWY-5491 "Folate biosynthesis";"Thiamine metabolism";"Diethylphosphate degradation" ID=BGER004439-PA|Name=BGER004439-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER019542-PA|Name=BGER019542-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Glycosphingolipid metabolism" ID=BGER007856-PA|Name=BGER007856-PA 7 KEGG: 00983+2.4.2.10;Reactome: R-HSA-500753;MetaCyc: PWY-7791;MetaCyc: PWY-7790;MetaCyc: PWY-5686;KEGG: 00240+4.1.1.23;KEGG: 00240+2.4.2.10 "Drug metabolism - other enzymes";"Pyrimidine biosynthesis";"UMP biosynthesis III";"UMP biosynthesis II";"UMP biosynthesis I";"Pyrimidine metabolism";"Pyrimidine metabolism" ID=BGER020523-PA|Name=BGER020523-PA 10 MetaCyc: PWY-5891;MetaCyc: PWY-5892;MetaCyc: PWY-7996;Reactome: R-HSA-2142789;MetaCyc: PWY-5890;MetaCyc: PWY-5849;MetaCyc: PWY-5895;MetaCyc: PWY-5839;MetaCyc: PWY-5844;KEGG: 00130+2.1.1.163 "Menaquinol-11 biosynthesis";"Menaquinol-12 biosynthesis";"Menaquinol-4 biosynthesis I";"Ubiquinol biosynthesis";"Menaquinol-10 biosynthesis";"Menaquinol-6 biosynthesis";"Menaquinol-13 biosynthesis";"Menaquinol-7 biosynthesis";"Menaquinol-9 biosynthesis";"Ubiquinone and other terpenoid-quinone biosynthesis" ID=BGER024443-PA|Name=BGER024443-PA 14 MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7619;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7602;MetaCyc: PWY-7035;MetaCyc: PWY-7601;MetaCyc: PWY-8041;MetaCyc: PWY-7036;MetaCyc: PWY-7725;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-6433 "Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Juniperonate biosynthesis";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Very long chain fatty acid biosynthesis II";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)" ID=BGER003798-PA|Name=BGER003798-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER000013-PA|Name=BGER000013-PA 2 Reactome: R-HSA-3769402;Reactome: R-HSA-201722 "Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER024675-PA|Name=BGER024675-PA 1 Reactome: R-HSA-8876725 "Protein methylation" ID=BGER000496-PA|Name=BGER000496-PA 24 Reactome: R-HSA-163359;Reactome: R-HSA-500657;Reactome: R-HSA-6814122;Reactome: R-HSA-418555;Reactome: R-HSA-392851;Reactome: R-HSA-381676;Reactome: R-HSA-9009391;Reactome: R-HSA-456926;Reactome: R-HSA-416476;Reactome: R-HSA-418594;Reactome: R-HSA-418597;Reactome: R-HSA-8964616;Reactome: R-HSA-432040;Reactome: R-HSA-392170;Reactome: R-HSA-4086398;Reactome: R-HSA-428930;Reactome: R-HSA-392451;Reactome: R-HSA-8964315;Reactome: R-HSA-400042;Reactome: R-HSA-420092;Reactome: R-HSA-202040;Reactome: R-HSA-418592;Reactome: R-HSA-416482;Reactome: R-HSA-418217 "Glucagon signaling in metabolic regulation";"Presynaptic function of Kainate receptors";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G alpha (s) signalling events";"Prostacyclin signalling through prostacyclin receptor";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"Extra-nuclear estrogen signaling";"Thrombin signalling through proteinase activated receptors (PARs)";"G alpha (q) signalling events";"G alpha (i) signalling events";"G alpha (z) signalling events";"G beta:gamma signalling through CDC42";"Vasopressin regulates renal water homeostasis via Aquaporins";"ADP signalling through P2Y purinoceptor 12";"Ca2+ pathway";"Thromboxane signalling through TP receptor";"G beta:gamma signalling through PI3Kgamma";"G beta:gamma signalling through BTK";"Adrenaline,noradrenaline inhibits insulin secretion";"Glucagon-type ligand receptors";"G-protein activation";"ADP signalling through P2Y purinoceptor 1";"G alpha (12/13) signalling events";"G beta:gamma signalling through PLC beta" ID=BGER019011-PA|Name=BGER019011-PA 3 Reactome: R-HSA-2024096;Reactome: R-HSA-2206302;Reactome: R-HSA-2024101 "HS-GAG degradation";"MPS I - Hurler syndrome";"CS/DS degradation" ID=BGER021849-PA|Name=BGER021849-PA 1 Reactome: R-HSA-209968 "Thyroxine biosynthesis" ID=BGER024233-PA|Name=BGER024233-PA 20 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-3371571;Reactome: R-HSA-1632852;Reactome: R-HSA-9639288;Reactome: R-HSA-6804757;Reactome: R-HSA-5218920;KEGG: 04926+2.7.11.1;Reactome: R-HSA-8943724;KEGG: 04714+2.7.11.1;Reactome: R-HSA-1257604;Reactome: R-HSA-5674400;Reactome: R-HSA-380972;KEGG: 04151+2.7.11.1;Reactome: R-HSA-5628897;Reactome: R-HSA-166208;Reactome: R-HSA-389357;Reactome: R-HSA-165159;KEGG: 04150+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"HSF1-dependent transactivation";"Macroautophagy";"Amino acids regulate mTORC1";"Regulation of TP53 Degradation";"VEGFR2 mediated vascular permeability";"Relaxin signaling pathway";"Regulation of PTEN gene transcription";"Thermogenesis";"PIP3 activates AKT signaling";"Constitutive Signaling by AKT1 E17K in Cancer";"Energy dependent regulation of mTOR by LKB1-AMPK";"PI3K-Akt signaling pathway";"TP53 Regulates Metabolic Genes";"mTORC1-mediated signalling";"CD28 dependent PI3K/Akt signaling";"mTOR signalling";"mTOR signaling pathway" ID=BGER020901-PA|Name=BGER020901-PA 1 Reactome: R-HSA-191273 "Cholesterol biosynthesis" ID=BGER011921-PA|Name=BGER011921-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER019488-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER024040-PA|Name=BGER024040-PA 4 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-8856828;Reactome: R-HSA-3928662 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"Clathrin-mediated endocytosis";"EPHB-mediated forward signaling" ID=BGER003499-PA|Name=BGER003499-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" ID=BGER014999-PA|Name=BGER014999-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER018381-PA|Name=BGER018381-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER002907-PA|Name=BGER002907-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649 "Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation" ID=BGER003973-PA|Name=BGER003973-PA 4 Reactome: R-HSA-2029482;Reactome: R-HSA-164944;Reactome: R-HSA-4420097;Reactome: R-HSA-8849471 "Regulation of actin dynamics for phagocytic cup formation";"Nef and signal transduction";"VEGFA-VEGFR2 Pathway";"PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases" ID=BGER000216-PA|Name=BGER000216-PA 7 KEGG: 00710+3.1.3.11;MetaCyc: PWY-5484;Reactome: R-HSA-70263;KEGG: 00051+3.1.3.11;KEGG: 00010+3.1.3.11;KEGG: 00680+3.1.3.11;KEGG: 00030+3.1.3.11 "Carbon fixation in photosynthetic organisms";"Glycolysis II (from fructose 6-phosphate)";"Gluconeogenesis";"Fructose and mannose metabolism";"Glycolysis / Gluconeogenesis";"Methane metabolism";"Pentose phosphate pathway" ID=BGER003470-PA|Name=BGER003470-PA 2 Reactome: R-HSA-9010553;Reactome: R-HSA-975957 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER025667-PA|Name=BGER025667-PA 2 Reactome: R-HSA-381038;Reactome: R-HSA-1799339 "XBP1(S) activates chaperone genes";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER012578-PA|Name=BGER012578-PA 2 Reactome: R-HSA-3785653;Reactome: R-HSA-3322077 "Myoclonic epilepsy of Lafora";"Glycogen synthesis" ID=BGER027233-PA|Name=BGER027233-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER015999-PA|Name=BGER015999-PA 56 Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-202424;Reactome: R-HSA-174084;Reactome: R-HSA-174113;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-5658442;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5632684;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-2467813;Reactome: R-HSA-4641257;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-8939236;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-4641258;Reactome: R-HSA-5689880;Reactome: R-HSA-1236978;Reactome: R-HSA-8951664;Reactome: R-HSA-195253;Reactome: R-HSA-69017;Reactome: R-HSA-8948751;Reactome: R-HSA-68949;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-187577;Reactome: R-HSA-382556;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-174178;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-5689603;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-69601 "NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Downstream TCR signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF-beta-TrCP mediated degradation of Emi1";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of RAS by GAPs";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Hedgehog 'on' state";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Separation of Sister Chromatids";"Degradation of AXIN";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Degradation of DVL";"Ub-specific processing proteases";"Cross-presentation of soluble exogenous antigens (endosomes)";"Neddylation";"Degradation of beta-catenin by the destruction complex";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of PTEN stability and activity";"Orc1 removal from chromatin";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF(Skp2)-mediated degradation of p27/p21";"ABC-family proteins mediated transport";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"UCH proteinases";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A" ID=BGER005546-PA|Name=BGER005546-PA 14 KEGG: 00720+1.3.5.1;MetaCyc: PWY-7279;MetaCyc: PWY-5690;MetaCyc: PWY-6728;Reactome: R-HSA-611105;MetaCyc: PWY-561;MetaCyc: PWY-4302;MetaCyc: PWY-6969;KEGG: 00190+1.3.5.1;KEGG: 00020+1.3.5.1;KEGG: 00650+1.3.5.1;MetaCyc: PWY-3781;Reactome: R-HSA-71403;MetaCyc: PWY-7254 "Carbon fixation pathways in prokaryotes";"Aerobic respiration II (cytochrome c) (yeast)";"TCA cycle II (plants and fungi)";"Methylaspartate cycle";"Respiratory electron transport";"Superpathway of glyoxylate cycle and fatty acid degradation";"Aerobic respiration III (alternative oxidase pathway)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Oxidative phosphorylation";"Citrate cycle (TCA cycle)";"Butanoate metabolism";"Aerobic respiration I (cytochrome c)";"Citric acid cycle (TCA cycle)";"TCA cycle VII (acetate-producers)" ID=BGER029077-PA|Name=BGER029077-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER014875-PA|Name=BGER014875-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER026073-PA|Name=BGER026073-PA 10 Reactome: R-HSA-427413;Reactome: R-HSA-9615017;Reactome: R-HSA-9022702;Reactome: R-HSA-983231;Reactome: R-HSA-9022699;Reactome: R-HSA-8936459;Reactome: R-HSA-3899300;Reactome: R-HSA-9022538;Reactome: R-HSA-9022692;Reactome: R-HSA-400206 "NoRC negatively regulates rRNA expression";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"MECP2 regulates transcription of neuronal ligands";"Factors involved in megakaryocyte development and platelet production";"MECP2 regulates neuronal receptors and channels";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"SUMOylation of transcription cofactors";"Loss of MECP2 binding ability to 5mC-DNA";"Regulation of MECP2 expression and activity";"Regulation of lipid metabolism by PPARalpha" ID=BGER019431-PA|Name=BGER019431-PA 1 Reactome: R-HSA-391908 "Prostanoid ligand receptors" ID=BGER017920-PA|Name=BGER017920-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" ID=BGER012873-PA|Name=BGER012873-PA 56 Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-174184;Reactome: R-HSA-5678895;Reactome: R-HSA-5658442;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-5610785;Reactome: R-HSA-9604323;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-202424;Reactome: R-HSA-4608870;Reactome: R-HSA-9020702;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-450408;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-195253;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-69601;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-5689603;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556 "Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Defective CFTR causes cystic fibrosis";"Regulation of RAS by GAPs";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Negative regulation of NOTCH4 signaling";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Downstream TCR signaling";"Asymmetric localization of PCP proteins";"Interleukin-1 signaling";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Degradation of AXIN";"Separation of Sister Chromatids";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Degradation of beta-catenin by the destruction complex";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"UCH proteinases";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport" ID=BGER012479-PA|Name=BGER012479-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER018724-PA|Name=BGER018724-PA 7 Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" ID=BGER011504-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER002951-PA|Name=BGER002951-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER019803-PA|Name=BGER019803-PA 7 KEGG: 00562+2.7.8.11;MetaCyc: PWY-6352;KEGG: 04070+2.7.8.11;KEGG: 00564+2.7.8.11;MetaCyc: PWY-6351;Reactome: R-HSA-1483226;MetaCyc: PWY-7625 "Inositol phosphate metabolism";"3-phosphoinositide biosynthesis";"Phosphatidylinositol signaling system";"Glycerophospholipid metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of PI";"Phosphatidylinositol biosynthesis II (eukaryotes)" ID=BGER029675-PA|Name=BGER029675-PA 13 MetaCyc: PWY-5537;KEGG: 00720+6.2.1.5;MetaCyc: PWY-5538;Reactome: R-HSA-71403;KEGG: 00640+6.2.1.5;MetaCyc: PWY-6969;MetaCyc: PWY-5392;MetaCyc: PWY-7384;MetaCyc: PWY-5690;KEGG: 00660+6.2.1.5;KEGG: 00020+6.2.1.5;MetaCyc: PWY-5913;MetaCyc: PWY-6728 "Pyruvate fermentation to acetate V";"Carbon fixation pathways in prokaryotes";"Pyruvate fermentation to acetate VI";"Citric acid cycle (TCA cycle)";"Propanoate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"TCA cycle II (plants and fungi)";"C5-Branched dibasic acid metabolism";"Citrate cycle (TCA cycle)";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle" ID=BGER016529-PA|Name=BGER016529-PA 8 KEGG: 00270+1.1.1.27;MetaCyc: PWY-8086;Reactome: R-HSA-70268;KEGG: 00620+1.1.1.27;KEGG: 00010+1.1.1.27;MetaCyc: PWY-5481;KEGG: 00640+1.1.1.27;MetaCyc: PWY-6901 "Cysteine and methionine metabolism";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Pyruvate metabolism";"Pyruvate metabolism";"Glycolysis / Gluconeogenesis";"Pyruvate fermentation to (S)-lactate";"Propanoate metabolism";"Superpathway of glucose and xylose degradation" ID=BGER006995-PA|Name=BGER006995-PA 10 Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-3214847;Reactome: R-HSA-167161;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-6804756 "RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"HATs acetylate histones";"HIV Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"Regulation of TP53 Activity through Phosphorylation" ID=BGER024375-PA|Name=BGER024375-PA 3 Reactome: R-HSA-6787639;KEGG: 00051+1.1.1.271;KEGG: 00520+1.1.1.271 "GDP-fucose biosynthesis";"Fructose and mannose metabolism";"Amino sugar and nucleotide sugar metabolism" ID=BGER011742-PA|Name=BGER011742-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" ID=BGER001340-PA|Name=BGER001340-PA 6 Reactome: R-HSA-70921;MetaCyc: PWY-5030;MetaCyc: PWY-5497;KEGG: 00670+2.1.2.5;KEGG: 00340+2.1.2.5;KEGG: 00670+4.3.1.4+2.1.2.5 "Histidine catabolism";"L-histidine degradation III";"Purine nucleobases degradation II (anaerobic)";"One carbon pool by folate";"Histidine metabolism";"One carbon pool by folate" ID=BGER014677-PA|Name=BGER014677-PA 22 Reactome: R-HSA-5675221;Reactome: R-HSA-4641262;Reactome: R-HSA-5673000;Reactome: R-HSA-432142;Reactome: R-HSA-68877;Reactome: R-HSA-195253;Reactome: R-HSA-5358752;Reactome: R-HSA-5358749;Reactome: R-HSA-5358747;Reactome: R-HSA-5467337;Reactome: R-HSA-5358751;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-196299;Reactome: R-HSA-5339716;Reactome: R-HSA-6811558;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-5467340;Reactome: R-HSA-389513;Reactome: R-HSA-141444;Reactome: R-HSA-5467348 "Negative regulation of MAPK pathway";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"RAF activation";"Platelet sensitization by LDL";"Mitotic Prometaphase";"Degradation of beta-catenin by the destruction complex";"T41 mutants of beta-catenin aren't phosphorylated";"S37 mutants of beta-catenin aren't phosphorylated";"S33 mutants of beta-catenin aren't phosphorylated";"APC truncation mutants have impaired AXIN binding";"S45 mutants of beta-catenin aren't phosphorylated";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Beta-catenin phosphorylation cascade";"Misspliced GSK3beta mutants stabilize beta-catenin";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"AXIN missense mutants destabilize the destruction complex";"CTLA4 inhibitory signaling";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Truncations of AMER1 destabilize the destruction complex" ID=BGER029060-PB|Name=BGER029060-PB 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER029148-PA|Name=BGER029148-PA 1 Reactome: R-HSA-429958 "mRNA decay by 3' to 5' exoribonuclease" ID=BGER004616-PA|Name=BGER004616-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" ID=BGER012470-PA|Name=BGER012470-PA 4 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187;Reactome: R-HSA-72163 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway" ID=BGER012313-PB|Name=BGER012313-PB 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER020233-PA|Name=BGER020233-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER015060-PA|Name=BGER015060-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER005899-PA|Name=BGER005899-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER000217-PA|Name=BGER000217-PA 27 Reactome: R-HSA-72086;Reactome: R-HSA-159236;Reactome: R-HSA-112382;Reactome: R-HSA-6807505;Reactome: R-HSA-72165;Reactome: R-HSA-111367;Reactome: R-HSA-167242;Reactome: R-HSA-72203;Reactome: R-HSA-674695;Reactome: R-HSA-77588;Reactome: R-HSA-8851708;Reactome: R-HSA-159227;Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-72187;Reactome: R-HSA-191859;Reactome: R-HSA-9010553;Reactome: R-HSA-6803529;Reactome: R-HSA-113418;Reactome: R-HSA-159231;Reactome: R-HSA-72163;Reactome: R-HSA-975956;Reactome: R-HSA-167158;Reactome: R-HSA-975957;Reactome: R-HSA-159230;Reactome: R-HSA-167200;Reactome: R-HSA-167152 "mRNA Capping";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Formation of RNA Pol II elongation complex";"RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Minor Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Processing of Capped Intron-Containing Pre-mRNA";"RNA Polymerase II Pre-transcription Events";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"Signaling by FGFR2 IIIa TM";"Transport of the SLBP independent Mature mRNA";"RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"mRNA 3'-end processing";"snRNP Assembly";"Regulation of expression of SLITs and ROBOs";"FGFR2 alternative splicing";"Formation of the Early Elongation Complex";"Transport of Mature mRNA Derived from an Intronless Transcript";"mRNA Splicing - Major Pathway";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of the HIV-1 Early Elongation Complex";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Transport of the SLBP Dependant Mature mRNA";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of HIV elongation complex in the absence of HIV Tat" ID=BGER001099-PA|Name=BGER001099-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER018782-PA|Name=BGER018782-PA 16 Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72702;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-1799339;Reactome: R-HSA-72689 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits" ID=BGER025628-PA|Name=BGER025628-PA 2 Reactome: R-HSA-381038;Reactome: R-HSA-1799339 "XBP1(S) activates chaperone genes";"SRP-dependent cotranslational protein targeting to membrane" ID=BGER004453-PA|Name=BGER004453-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER002682-PA|Name=BGER002682-PA 56 Reactome: R-HSA-5610783;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5607761;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-180585;Reactome: R-HSA-8852276;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-180534;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-211733;Reactome: R-HSA-5358346;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69601;Reactome: R-HSA-349425;Reactome: R-HSA-8854050;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174178;Reactome: R-HSA-1236974;Reactome: R-HSA-2871837;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-1234176;Reactome: R-HSA-68949;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978 "Degradation of GLI2 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of AXIN";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Vif-mediated degradation of APOBEC3G";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Vpu mediated degradation of CD4";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Hedgehog ligand biogenesis";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Autodegradation of the E3 ubiquitin ligase COP1";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"ER-Phagosome pathway";"FCERI mediated NF-kB activation";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Orc1 removal from chromatin";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Ub-specific processing proteases";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)" ID=BGER015107-PA|Name=BGER015107-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" ID=BGER002009-PA|Name=BGER002009-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" ID=BGER001497-PA|Name=BGER001497-PA 8 KEGG: 05170+2.7.11.1;Reactome: R-HSA-2028269;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1 "Human immunodeficiency virus 1 infection";"Signaling by Hippo";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Human cytomegalovirus infection";"Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway" ID=BGER004405-PA|Name=BGER004405-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" ID=BGER020621-PA|Name=BGER020621-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-430039 "mRNA Splicing - Major Pathway";"mRNA decay by 5' to 3' exoribonuclease" ID=BGER010573-PA|Name=BGER010573-PA 2 Reactome: R-HSA-383280;Reactome: R-HSA-4090294 "Nuclear Receptor transcription pathway";"SUMOylation of intracellular receptors" ID=BGER006899-PA|Name=BGER006899-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER006631-PA|Name=BGER006631-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER011201-PA|Name=BGER011201-PA 1 Reactome: R-HSA-197264 "Nicotinamide salvaging" ID=BGER022399-PA|Name=BGER022399-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER024187-PA|Name=BGER024187-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER027343-PA|Name=BGER027343-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" ID=BGER012081-PA|Name=BGER012081-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" ID=BGER017223-PA|Name=BGER017223-PA 10 Reactome: R-HSA-6804756;Reactome: R-HSA-674695;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-167161;Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-6807505;Reactome: R-HSA-76042;Reactome: R-HSA-167172 "Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"HIV Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome" ID=BGER004440-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER018473-PA|Name=BGER018473-PA 3 KEGG: 00730+3.1.3.1;KEGG: 00790+3.1.3.1;MetaCyc: PWY-5491 "Thiamine metabolism";"Folate biosynthesis";"Diethylphosphate degradation" ID=BGER012734-PA|Name=BGER012734-PA 14 Reactome: R-HSA-5687128;Reactome: R-HSA-5628897;Reactome: R-HSA-9022692;Reactome: R-HSA-426486;Reactome: R-HSA-426496;Reactome: R-HSA-8934593;Reactome: R-HSA-203927;Reactome: R-HSA-8986944;Reactome: R-HSA-9029569;Reactome: R-HSA-8943723;Reactome: R-HSA-9018519;Reactome: R-HSA-4086398;Reactome: R-HSA-8948700;Reactome: R-HSA-1912408 "MAPK6/MAPK4 signaling";"TP53 Regulates Metabolic Genes";"Regulation of MECP2 expression and activity";"Small interfering RNA (siRNA) biogenesis";"Post-transcriptional silencing by small RNAs";"Regulation of RUNX1 Expression and Activity";"MicroRNA (miRNA) biogenesis";"Transcriptional Regulation by MECP2";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of PTEN mRNA translation";"Estrogen-dependent gene expression";"Ca2+ pathway";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"Pre-NOTCH Transcription and Translation" ID=BGER000219-PA|Name=BGER000219-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER008028-PA|Name=BGER008028-PA 1 Reactome: R-HSA-2024096 "HS-GAG degradation" ID=BGER003626-PA|Name=BGER003626-PA 7 Reactome: R-HSA-70268;Reactome: R-HSA-204174;Reactome: R-HSA-5362517;Reactome: R-HSA-389661;KEGG: 00020+2.3.1.12;KEGG: 00620+2.3.1.12;KEGG: 00010+2.3.1.12 "Pyruvate metabolism";"Regulation of pyruvate dehydrogenase (PDH) complex";"Signaling by Retinoic Acid";"Glyoxylate metabolism and glycine degradation";"Citrate cycle (TCA cycle)";"Pyruvate metabolism";"Glycolysis / Gluconeogenesis" ID=BGER017333-PA|Name=BGER017333-PA 30 Reactome: R-HSA-2564830;Reactome: R-HSA-75955;Reactome: R-HSA-75953;Reactome: R-HSA-427413;Reactome: R-HSA-6781827;Reactome: R-HSA-73762;Reactome: R-HSA-674695;Reactome: R-HSA-76042;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-72086;Reactome: R-HSA-6796648;Reactome: R-HSA-167152;Reactome: R-HSA-73772;Reactome: R-HSA-167160;Reactome: R-HSA-167200;Reactome: R-HSA-167161;Reactome: R-HSA-167162;Reactome: R-HSA-5696400;Reactome: R-HSA-73863;Reactome: R-HSA-5696395;Reactome: R-HSA-167158;Reactome: R-HSA-77075;Reactome: R-HSA-167172;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-113418;Reactome: R-HSA-6781823;Reactome: R-HSA-6782210 "Cytosolic iron-sulfur cluster assembly";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Transcription Initiation";"NoRC negatively regulates rRNA expression";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"mRNA Capping";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Promoter Escape";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"HIV Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"Dual Incision in GG-NER";"RNA Polymerase I Transcription Termination";"Formation of Incision Complex in GG-NER";"Formation of the HIV-1 Early Elongation Complex";"RNA Pol II CTD phosphorylation and interaction with CE";"Transcription of the HIV genome";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Formation of the Early Elongation Complex";"Formation of TC-NER Pre-Incision Complex";"Gap-filling DNA repair synthesis and ligation in TC-NER" ID=BGER016240-PA|Name=BGER016240-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER003064-PA|Name=BGER003064-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER008306-PA|Name=BGER008306-PA 6 Reactome: R-HSA-5654706;Reactome: R-HSA-5654712;Reactome: R-HSA-5673001;Reactome: R-HSA-9028731;Reactome: R-HSA-5654700;Reactome: R-HSA-5654693 "FRS-mediated FGFR3 signaling";"FRS-mediated FGFR4 signaling";"RAF/MAP kinase cascade";"Activated NTRK2 signals through FRS2 and FRS3";"FRS-mediated FGFR2 signaling";"FRS-mediated FGFR1 signaling" ID=BGER022456-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER007505-PA|Name=BGER007505-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" ID=BGER018188-PA|Name=BGER018188-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER027775-PA|Name=BGER027775-PA 13 MetaCyc: PWY-561;KEGG: 00620+4.2.1.2;MetaCyc: PWY-7254;Reactome: R-HSA-71403;MetaCyc: PWY-5392;KEGG: 00020+4.2.1.2;MetaCyc: PWY-8086;MetaCyc: PWY-6969;KEGG: 00720+4.2.1.2;MetaCyc: PWY-5690;MetaCyc: PWY-7384;MetaCyc: PWY-5913;MetaCyc: PWY-6728 "Superpathway of glyoxylate cycle and fatty acid degradation";"Pyruvate metabolism";"TCA cycle VII (acetate-producers)";"Citric acid cycle (TCA cycle)";"Reductive TCA cycle II";"Citrate cycle (TCA cycle)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Carbon fixation pathways in prokaryotes";"TCA cycle II (plants and fungi)";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Partial TCA cycle (obligate autotrophs)";"Methylaspartate cycle" ID=BGER009407-PA|Name=BGER009407-PA 1 Reactome: R-HSA-1296061 "HCN channels" ID=BGER021196-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER014316-PA|Name=BGER014316-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER010460-PA|Name=BGER010460-PA 3 Reactome: R-HSA-8951664;Reactome: R-HSA-390471;Reactome: R-HSA-983168 "Neddylation";"Association of TriC/CCT with target proteins during biosynthesis";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER021719-PA|Name=BGER021719-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids" ID=BGER013232-PA|Name=BGER013232-PA 1 Reactome: R-HSA-5689901 "Metalloprotease DUBs" ID=BGER002439-PA|Name=BGER002439-PA 4 KEGG: 04658+3.1.3.16;Reactome: R-HSA-180024;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"DARPP-32 events";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" ID=BGER023691-PA|Name=BGER023691-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" ID=BGER014795-PA|Name=BGER014795-PA 2 Reactome: R-HSA-1660661;Reactome: R-HSA-6798695 "Sphingolipid de novo biosynthesis";"Neutrophil degranulation" ID=BGER018527-PA|Name=BGER018527-PA 5 Reactome: R-HSA-390450;Reactome: R-HSA-6814122;Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-389960 "Folding of actin by CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Formation of tubulin folding intermediates by CCT/TriC" ID=BGER008411-PA|Name=BGER008411-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" ID=BGER010238-PA|Name=BGER010238-PA 9 Reactome: R-HSA-6798695;Reactome: R-HSA-380972;Reactome: R-HSA-5628897;Reactome: R-HSA-5674135;Reactome: R-HSA-1632852;Reactome: R-HSA-166208;Reactome: R-HSA-9639288;Reactome: R-HSA-8943724;Reactome: R-HSA-165159 "Neutrophil degranulation";"Energy dependent regulation of mTOR by LKB1-AMPK";"TP53 Regulates Metabolic Genes";"MAP2K and MAPK activation";"Macroautophagy";"mTORC1-mediated signalling";"Amino acids regulate mTORC1";"Regulation of PTEN gene transcription";"mTOR signalling" ID=BGER010659-PA|Name=BGER010659-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" ID=BGER001827-PA|Name=BGER001827-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" ID=BGER019506-PA|Name=BGER019506-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER027223-PA|Name=BGER027223-PA 2 Reactome: R-HSA-9020702;Reactome: R-HSA-6798695 "Interleukin-1 signaling";"Neutrophil degranulation" ID=BGER001383-PA|Name=BGER001383-PA 3 Reactome: R-HSA-1614558;Reactome: R-HSA-1614603;Reactome: R-HSA-2408508 "Degradation of cysteine and homocysteine";"Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se" ID=BGER009683-PA|Name=BGER009683-PA 7 MetaCyc: PWY-7210;MetaCyc: PWY-6545;MetaCyc: PWY-7184;KEGG: 00730+3.6.1.15;KEGG: 00230+3.6.1.15;MetaCyc: PWY-7185;MetaCyc: PWY-7198 "Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Thiamine metabolism";"Purine metabolism";"UTP and CTP dephosphorylation I";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV" ID=BGER010548-PA|Name=BGER010548-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER027226-PA|Name=BGER027226-PA 5 KEGG: 00230+6.3.5.3;MetaCyc: PWY-6277;MetaCyc: PWY-6122;Reactome: R-HSA-73817;MetaCyc: PWY-6121 "Purine metabolism";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis II";"Purine ribonucleoside monophosphate biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis I" ID=BGER012930-PA|Name=BGER012930-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER011780-PA|Name=BGER011780-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER010513-PA|Name=BGER010513-PA 2 Reactome: R-HSA-8876725;Reactome: R-HSA-611105 "Protein methylation";"Respiratory electron transport" ID=BGER009999-PA|Name=BGER009999-PA 4 KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219;KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943 "Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis";"Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates" ID=BGER020202-PA|Name=BGER020202-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER000208-PA|Name=BGER000208-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" ID=BGER012250-PA|Name=BGER012250-PA 6 Reactome: R-HSA-1474151;MetaCyc: PWY-6983;MetaCyc: PWY-7442;MetaCyc: PWY-5664;KEGG: 00790+4.2.3.12;MetaCyc: PWY-5663 "Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation";"Threo-tetrahydrobiopterin biosynthesis";"Drosopterin and aurodrosopterin biosynthesis";"Erythro-tetrahydrobiopterin biosynthesis II";"Folate biosynthesis";"Erythro-tetrahydrobiopterin biosynthesis I" ID=BGER013568-PA|Name=BGER013568-PA 1 Reactome: R-HSA-5358493 "Synthesis of diphthamide-EEF2" ID=BGER025514-PA|Name=BGER025514-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER020711-PA|Name=BGER020711-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" ID=BGER015115-PA|Name=BGER015115-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-1799339;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-975957;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-156827 "Selenocysteine synthesis";"SRP-dependent cotranslational protein targeting to membrane";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Peptide chain elongation";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression" ID=BGER012192-PA|Name=BGER012192-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557 "Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis" ID=BGER001416-PA|Name=BGER001416-PA 2 Reactome: R-HSA-5689880;Reactome: R-HSA-110320 "Ub-specific processing proteases";"Translesion Synthesis by POLH" ID=BGER002973-PA|Name=BGER002973-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER023463-PA|Name=BGER023463-PA 16 Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-1799339;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902 "Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"SRP-dependent cotranslational protein targeting to membrane";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation" ID=BGER016989-PA|Name=BGER016989-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" ID=BGER022100-PA|Name=BGER022100-PA 4 Reactome: R-HSA-68884;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-6811434 "Mitotic Telophase/Cytokinesis";"Kinesins";"MHC class II antigen presentation";"COPI-dependent Golgi-to-ER retrograde traffic" ID=BGER008140-PA|Name=BGER008140-PA 2 KEGG: 00511+3.2.1.24;Reactome: R-HSA-8853383 "Other glycan degradation";"Lysosomal oligosaccharide catabolism" ID=BGER028378-PA|Name=BGER028378-PA 1 MetaCyc: PWY-7533 "Gliotoxin biosynthesis" ID=BGER013942-PA|Name=BGER013942-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER022180-PA|Name=BGER022180-PA 6 Reactome: R-HSA-390471;Reactome: R-HSA-389957;Reactome: R-HSA-390450;Reactome: R-HSA-6814122;Reactome: R-HSA-389960;Reactome: R-HSA-5620922 "Association of TriC/CCT with target proteins during biosynthesis";"Prefoldin mediated transfer of substrate to CCT/TriC";"Folding of actin by CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium" ID=BGER025314-PA|Name=BGER025314-PA 6 KEGG: 00630+1.11.1.6;Reactome: R-HSA-6798695;Reactome: R-HSA-9615017;Reactome: R-HSA-3299685;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6 "Glyoxylate and dicarboxylate metabolism";"Neutrophil degranulation";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Detoxification of Reactive Oxygen Species";"Peroxisomal protein import";"Tryptophan metabolism" ID=BGER005902-PA|Name=BGER005902-PA 1 Reactome: R-HSA-381038 "XBP1(S) activates chaperone genes" ID=BGER014122-PA|Name=BGER014122-PA 5 Reactome: R-HSA-8936459;Reactome: R-HSA-3769402;Reactome: R-HSA-5617472;Reactome: R-HSA-3214841;Reactome: R-HSA-201722 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Deactivation of the beta-catenin transactivating complex";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER012958-PA|Name=BGER012958-PA 1 Reactome: R-HSA-1614635 "Sulfur amino acid metabolism" ID=BGER016768-PA|Name=BGER016768-PA 2 Reactome: R-HSA-6784531;Reactome: R-HSA-6791226 "tRNA processing in the nucleus";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER003509-PA|Name=BGER003509-PA 6 Reactome: R-HSA-9033241;Reactome: R-HSA-3299685;KEGG: 00380+1.11.1.6;Reactome: R-HSA-9615017;Reactome: R-HSA-6798695;KEGG: 00630+1.11.1.6 "Peroxisomal protein import";"Detoxification of Reactive Oxygen Species";"Tryptophan metabolism";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Neutrophil degranulation";"Glyoxylate and dicarboxylate metabolism" ID=BGER003851-PA|Name=BGER003851-PA 1 KEGG: 00860+4.4.1.17 "Porphyrin and chlorophyll metabolism" ID=BGER019729-PA|Name=BGER019729-PA 2 MetaCyc: PWY-7221;KEGG: 00230+2.7.4.8 "Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism" ID=BGER022742-PA|Name=Cathepsin 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" ID=BGER011501-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER017866-PA|Name=BGER017866-PA 6 Reactome: R-HSA-3769402;Reactome: R-HSA-4411364;Reactome: R-HSA-201722;Reactome: R-HSA-4086398;Reactome: R-HSA-8951430;Reactome: R-HSA-4641265 "Deactivation of the beta-catenin transactivating complex";"Binding of TCF/LEF:CTNNB1 to target gene promoters";"Formation of the beta-catenin:TCF transactivating complex";"Ca2+ pathway";"RUNX3 regulates WNT signaling";"Repression of WNT target genes" ID=BGER024565-PA|Name=BGER024565-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER007908-PA|Name=BGER007908-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" ID=BGER008100-PA|Name=BGER008100-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" ID=BGER017634-PA|Name=BGER017634-PA 5 Reactome: R-HSA-3656253;Reactome: R-HSA-2022928;MetaCyc: PWY-6558;Reactome: R-HSA-3656237;KEGG: 00534+2.4.1.224+2.4.1.225 "Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"HS-GAG biosynthesis";"Heparan sulfate biosynthesis (late stages)";"Defective EXT2 causes exostoses 2";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin" ID=BGER025308-PA|Name=BGER025308-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER001247-PA|Name=BGER001247-PA 1 Reactome: R-HSA-201451 "Signaling by BMP" ID=BGER010349-PA|Name=BGER010349-PA 6 Reactome: R-HSA-389960;Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-390450;Reactome: R-HSA-5620922 "Formation of tubulin folding intermediates by CCT/TriC";"Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Folding of actin by CCT/TriC";"BBSome-mediated cargo-targeting to cilium" ID=BGER005256-PA|Name=BGER005256-PA 1 Reactome: R-HSA-432720 "Lysosome Vesicle Biogenesis" ID=BGER017259-PA|Name=BGER017259-PA 5 Reactome: R-HSA-936440;Reactome: R-HSA-6811555;Reactome: R-HSA-5668599;Reactome: R-HSA-1169408;Reactome: R-HSA-6804756 "Negative regulators of DDX58/IFIH1 signaling";"PI5P Regulates TP53 Acetylation";"RHO GTPases Activate NADPH Oxidases";"ISG15 antiviral mechanism";"Regulation of TP53 Activity through Phosphorylation" ID=BGER010123-PA|Name=BGER010123-PA 9 Reactome: R-HSA-446343;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-446353 "Localization of the PINCH-ILK-PARVIN complex to focal adhesions";"Relaxin signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human cytomegalovirus infection";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Cell-extracellular matrix interactions" ID=BGER003424-PA|Name=BGER003424-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER012457-PA|Name=BGER012457-PA 19 Reactome: R-HSA-975634;Reactome: R-HSA-202733;Reactome: R-HSA-3000471;Reactome: R-HSA-3000497;Reactome: R-HSA-3000484;Reactome: R-HSA-8866423;Reactome: R-HSA-8963888;Reactome: R-HSA-381426;Reactome: R-HSA-8964041;Reactome: R-HSA-5686938;Reactome: R-HSA-432142;Reactome: R-HSA-3000480;Reactome: R-HSA-8856828;Reactome: R-HSA-8964026;Reactome: R-HSA-8964046;Reactome: R-HSA-8957275;Reactome: R-HSA-8964038;Reactome: R-HSA-8856825;Reactome: R-HSA-8963901 "Retinoid metabolism and transport";"Cell surface interactions at the vascular wall";"Scavenging by Class B Receptors";"Scavenging by Class H Receptors";"Scavenging by Class F Receptors";"VLDL assembly";"Chylomicron assembly";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"LDL remodeling";"Regulation of TLR by endogenous ligand";"Platelet sensitization by LDL";"Scavenging by Class A Receptors";"Clathrin-mediated endocytosis";"Chylomicron clearance";"VLDL clearance";"Post-translational protein phosphorylation";"LDL clearance";"Cargo recognition for clathrin-mediated endocytosis";"Chylomicron remodeling" ID=BGER021671-PA|Name=BGER021671-PA 14 Reactome: R-HSA-110314;Reactome: R-HSA-5696400;Reactome: R-HSA-5655862;Reactome: R-HSA-5651801;Reactome: R-HSA-174411;Reactome: R-HSA-69091;Reactome: R-HSA-6782135;Reactome: R-HSA-5656169;Reactome: R-HSA-110312;Reactome: R-HSA-5685942;Reactome: R-HSA-110320;Reactome: R-HSA-6782210;Reactome: R-HSA-5696397;Reactome: R-HSA-5656121 "Recognition of DNA damage by PCNA-containing replication complex";"Dual Incision in GG-NER";"Translesion synthesis by POLK";"PCNA-Dependent Long Patch Base Excision Repair";"Polymerase switching on the C-strand of the telomere";"Polymerase switching";"Dual incision in TC-NER";"Termination of translesion DNA synthesis";"Translesion synthesis by REV1";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by POLI" ID=BGER007404-PA|Name=BGER007404-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" ID=BGER024392-PA|Name=BGER024392-PA 3 Reactome: R-HSA-74259;Reactome: R-HSA-196807;Reactome: R-HSA-73621 "Purine catabolism";"Nicotinate metabolism";"Pyrimidine catabolism" ID=BGER010350-PA|Name=BGER010350-PA 5 Reactome: R-HSA-159231;Reactome: R-HSA-72187;Reactome: R-HSA-72163;Reactome: R-HSA-77595;Reactome: R-HSA-73856 "Transport of Mature mRNA Derived from an Intronless Transcript";"mRNA 3'-end processing";"mRNA Splicing - Major Pathway";"Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination" ID=BGER023180-PA|Name=BGER023180-PA 6 Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450604;Reactome: R-HSA-429958;Reactome: R-HSA-6791226 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER026311-PA|Name=BGER026311-PA 3 MetaCyc: PWY-7831;Reactome: R-HSA-9033807;MetaCyc: PWY-7833 "ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide";"ABO blood group biosynthesis";"Biosynthesis of Lewis epitopes (H. pylori)" ID=BGER015128-PA|Name=BGER015128-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER029618-PA|Name=BGER029618-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER012941-PA|Name=BGER012941-PA 3 Reactome: R-HSA-5423646;MetaCyc: PWY-7533;Reactome: R-HSA-2142691 "Aflatoxin activation and detoxification";"Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" ID=BGER011110-PA|Name=BGER011110-PA 7 KEGG: 05170+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1 "Human immunodeficiency virus 1 infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"Thermogenesis";"mTOR signaling pathway";"Human papillomavirus infection";"Human cytomegalovirus infection" ID=BGER028091-PA|Name=BGER028091-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" ID=BGER014831-PA|Name=BGER014831-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER002315-PA|Name=BGER002315-PA 1 Reactome: R-HSA-373753 "Nephrin family interactions" ID=BGER000354-PA|Name=BGER000354-PA 8 Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-2565942;Reactome: R-HSA-380259;Reactome: R-HSA-6798695;Reactome: R-HSA-380270;Reactome: R-HSA-5620912;Reactome: R-HSA-380284 "AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Regulation of PLK1 Activity at G2/M Transition";"Loss of Nlp from mitotic centrosomes";"Neutrophil degranulation";"Recruitment of mitotic centrosome proteins and complexes";"Anchoring of the basal body to the plasma membrane";"Loss of proteins required for interphase microtubule organization from the centrosome" ID=BGER016839-PA|Name=BGER016839-PA 1 KEGG: 04070+2.7.11.13 "Phosphatidylinositol signaling system" ID=BGER003741-PA|Name=BGER003741-PA 17 Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-975956;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-1799339;Reactome: R-HSA-6790901;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72702 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"SRP-dependent cotranslational protein targeting to membrane";"rRNA modification in the nucleus and cytosol";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"Ribosomal scanning and start codon recognition" ID=BGER024272-PA|Name=BGER024272-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER015634-PB|Name=BGER015634-PB 2 Reactome: R-HSA-171319;Reactome: R-HSA-201722 "Telomere Extension By Telomerase";"Formation of the beta-catenin:TCF transactivating complex" ID=BGER027497-PA|Name=BGER027497-PA 9 Reactome: R-HSA-6782135;Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-6781827;Reactome: R-HSA-5696394;Reactome: R-HSA-110314;Reactome: R-HSA-5696395;Reactome: R-HSA-8951664;Reactome: R-HSA-5696400 "Dual incision in TC-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"DNA Damage Recognition in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Formation of Incision Complex in GG-NER";"Neddylation";"Dual Incision in GG-NER" ID=BGER028562-PA|Name=BGER028562-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" ID=BGER021715-PA|Name=BGER021715-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-264876;Reactome: R-HSA-5620916 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing";"VxPx cargo-targeting to cilium" ID=BGER007819-PA|Name=BGER007819-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" ID=BGER023678-PA|Name=BGER023678-PA 1 Reactome: R-HSA-373752 "Netrin-1 signaling" ID=BGER028201-PA|Name=BGER028201-PA 3 Reactome: R-HSA-3214841;Reactome: R-HSA-383280;Reactome: R-HSA-8936459 "PKMTs methylate histone lysines";"Nuclear Receptor transcription pathway";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function" ID=BGER026782-PA|Name=BGER026782-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" ID=BGER003439-PA|Name=BGER003439-PA 4 Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-381771;Reactome: R-HSA-400511 "Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)";"Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)" ID=BGER018145-PA|Name=BGER018145-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-983712;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"Ion channel transport";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes" ID=BGER009915-PA|Name=BGER009915-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" ID=BGER026146-PA|Name=BGER026146-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER019299-PA|Name=BGER019299-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-6798695 "Glycosphingolipid metabolism";"Neutrophil degranulation" ID=BGER012740-PA|Name=BGER012740-PA 18 MetaCyc: PWY-7187;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7197;MetaCyc: PWY-7224;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7205;MetaCyc: PWY-7210;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7227;MetaCyc: PWY-7226;MetaCyc: PWY-7220;MetaCyc: PWY-7198;MetaCyc: PWY-7221;MetaCyc: PWY-6545;MetaCyc: PWY-7176;MetaCyc: PWY-7184;Reactome: R-HSA-499943;MetaCyc: PWY-7222 "Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleotide phosphorylation";"Purine deoxyribonucleosides salvage";"Purine metabolism";"CMP phosphorylation";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Guanosine ribonucleotides de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Interconversion of nucleotide di- and triphosphates";"Guanosine deoxyribonucleotides de novo biosynthesis II" ID=BGER028781-PA|Name=BGER028781-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER018058-PA|Name=BGER018058-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" ID=BGER025993-PA|Name=BGER025993-PA 4 Reactome: R-HSA-77387;Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-983712 "Insulin receptor recycling";"ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Ion channel transport" ID=BGER027025-PA|Name=BGER027025-PA 2 KEGG: 00970+6.1.1.1;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" ID=BGER027446-PA|Name=BGER027446-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" ID=BGER024818-PA|Name=BGER024818-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER021645-PA|Name=BGER021645-PA 19 Reactome: R-HSA-8964026;Reactome: R-HSA-3000480;Reactome: R-HSA-8856828;Reactome: R-HSA-8963901;Reactome: R-HSA-8856825;Reactome: R-HSA-8964046;Reactome: R-HSA-8964038;Reactome: R-HSA-8957275;Reactome: R-HSA-432142;Reactome: R-HSA-381426;Reactome: R-HSA-5686938;Reactome: R-HSA-8964041;Reactome: R-HSA-8963888;Reactome: R-HSA-3000484;Reactome: R-HSA-8866423;Reactome: R-HSA-3000471;Reactome: R-HSA-202733;Reactome: R-HSA-975634;Reactome: R-HSA-3000497 "Chylomicron clearance";"Scavenging by Class A Receptors";"Clathrin-mediated endocytosis";"Chylomicron remodeling";"Cargo recognition for clathrin-mediated endocytosis";"VLDL clearance";"LDL clearance";"Post-translational protein phosphorylation";"Platelet sensitization by LDL";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Regulation of TLR by endogenous ligand";"LDL remodeling";"Chylomicron assembly";"Scavenging by Class F Receptors";"VLDL assembly";"Scavenging by Class B Receptors";"Cell surface interactions at the vascular wall";"Retinoid metabolism and transport";"Scavenging by Class H Receptors" ID=BGER015142-PA|Name=BGER015142-PA 4 MetaCyc: PWY-5189;KEGG: 00860+2.5.1.61;Reactome: R-HSA-189451;MetaCyc: PWY-5188 "Tetrapyrrole biosynthesis II (from glycine)";"Porphyrin and chlorophyll metabolism";"Heme biosynthesis";"Tetrapyrrole biosynthesis I (from glutamate)" ID=BGER019489-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER017640-PA|Name=BGER017640-PA 5 Reactome: R-HSA-389661;KEGG: 00640+1.2.4.4;KEGG: 00280+1.2.4.4;Reactome: R-HSA-70895;MetaCyc: PWY-5046 "Glyoxylate metabolism and glycine degradation";"Propanoate metabolism";"Valine, leucine and isoleucine degradation";"Branched-chain amino acid catabolism";"2-oxoisovalerate decarboxylation to isobutanoyl-CoA" ID=BGER004161-PA|Name=BGER004161-PA 7 KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1 "Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human cytomegalovirus infection";"Human papillomavirus infection" ID=BGER021114-PA|Name=BGER021114-PA 2 Reactome: R-HSA-1169408;Reactome: R-HSA-168276 "ISG15 antiviral mechanism";"NS1 Mediated Effects on Host Pathways" ID=BGER029443-PA|Name=BGER029443-PA 2 Reactome: R-HSA-6811436;Reactome: R-HSA-8876198 "COPI-independent Golgi-to-ER retrograde traffic";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER014151-PA|Name=BGER014151-PA 1 Reactome: R-HSA-72165 "mRNA Splicing - Minor Pathway" ID=BGER026304-PA|Name=BGER026304-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER008552-PA|Name=BGER008552-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" ID=BGER023313-PA|Name=BGER023313-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" ID=BGER002144-PA|Name=BGER002144-PA 2 Reactome: R-HSA-1650814;MetaCyc: PWY-7894 "Collagen biosynthesis and modifying enzymes";"Procollagen hydroxylation and glycosylation" ID=BGER001997-PA|Name=BGER001997-PA 1 Reactome: R-HSA-2559584 "Formation of Senescence-Associated Heterochromatin Foci (SAHF)" ID=BGER026738-PA|Name=BGER026738-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER016431-PA|Name=BGER016431-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" ID=BGER027882-PA|Name=BGER027882-PA 9 Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-6807505;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-674695;Reactome: R-HSA-167162;Reactome: R-HSA-167161;Reactome: R-HSA-75953 "Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II HIV Promoter Escape";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation" ID=BGER018736-PA|Name=BGER018736-PA 2 MetaCyc: PWY-6829;Reactome: R-HSA-6782315 "Trna methylation (yeast)";"tRNA modification in the nucleus and cytosol" ID=BGER019504-PA|Name=BGER019504-PA 1 Reactome: R-HSA-8950505 "Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" ID=BGER024132-PA|Name=BGER024132-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER024996-PA|Name=BGER024996-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER014123-PA|Name=BGER014123-PA 1 Reactome: R-HSA-5628897 "TP53 Regulates Metabolic Genes" ID=BGER019429-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER017946-PA|Name=BGER017946-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" ID=BGER004270-PA|Name=BGER004270-PA 4 KEGG: 00230+4.1.1.97;MetaCyc: PWY-7849;MetaCyc: PWY-5691;MetaCyc: PWY-7394 "Purine metabolism";"Urate conversion to allantoin III";"Urate conversion to allantoin I";"Urate conversion to allantoin II" ID=BGER024182-PA|Name=BGER024182-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER005209-PA|Name=BGER005209-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-3270619;Reactome: R-HSA-1834949;Reactome: R-HSA-5693571;Reactome: R-HSA-164843 "Neutrophil degranulation";"IRF3-mediated induction of type I IFN";"Cytosolic sensors of pathogen-associated DNA";"Nonhomologous End-Joining (NHEJ)";"2-LTR circle formation" ID=BGER000451-PA|Name=BGER000451-PA 1 Reactome: R-HSA-5419276 "Mitochondrial translation termination" ID=BGER022523-PA|Name=BGER022523-PA 4 Reactome: R-HSA-5693607;Reactome: R-HSA-111465;Reactome: R-HSA-5689880;Reactome: R-HSA-176187 "Processing of DNA double-strand break ends";"Apoptotic cleavage of cellular proteins";"Ub-specific processing proteases";"Activation of ATR in response to replication stress" ID=BGER009079-PA|Name=BGER009079-PA 3 Reactome: R-HSA-3000171;Reactome: R-HSA-3000157;Reactome: R-HSA-8874081 "Non-integrin membrane-ECM interactions";"Laminin interactions";"MET activates PTK2 signaling" ID=BGER006187-PA|Name=BGER006187-PA 5 MetaCyc: PWY-7185;Reactome: R-HSA-499943;MetaCyc: PWY-7177;KEGG: 00240+6.3.4.2;MetaCyc: PWY-7176 "UTP and CTP dephosphorylation I";"Interconversion of nucleotide di- and triphosphates";"UTP and CTP dephosphorylation II";"Pyrimidine metabolism";"UTP and CTP de novo biosynthesis" ID=BGER000759-PA|Name=BGER000759-PA 2 Reactome: R-HSA-2514853;Reactome: R-HSA-2299718 "Condensation of Prometaphase Chromosomes";"Condensation of Prophase Chromosomes" ID=BGER018971-PA|Name=BGER018971-PA 2 Reactome: R-HSA-2682334;Reactome: R-HSA-3928665 "EPH-Ephrin signaling";"EPH-ephrin mediated repulsion of cells" ID=BGER012198-PA|Name=BGER012198-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-983168 "Neutrophil degranulation";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER024120-PA|Name=BGER024120-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER018157-PA|Name=BGER018157-PA 2 Reactome: R-HSA-3295583;Reactome: R-HSA-418890 "TRP channels";"Role of second messengers in netrin-1 signaling" ID=BGER002824-PA|Name=BGER002824-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" ID=BGER026609-PA|Name=BGER026609-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-5576893 "Phase 0 - rapid depolarisation";"Phase 2 - plateau phase" ID=BGER010242-PA|Name=BGER010242-PA 7 Reactome: R-HSA-8856828;KEGG: 04070+3.1.3.36;KEGG: 00562+3.1.3.36;Reactome: R-HSA-1855183;MetaCyc: PWY-6368;Reactome: R-HSA-1855204;Reactome: R-HSA-1660499 "Clathrin-mediated endocytosis";"Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"Synthesis of IP2, IP, and Ins in the cytosol";"3-phosphoinositide degradation";"Synthesis of IP3 and IP4 in the cytosol";"Synthesis of PIPs at the plasma membrane" ID=BGER004362-PA|Name=BGER004362-PA 1 Reactome: R-HSA-379716 "Cytosolic tRNA aminoacylation" ID=BGER018365-PA|Name=BGER018365-PA 27 Reactome: R-HSA-168276;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-5619107;Reactome: R-HSA-191859;Reactome: R-HSA-180746;Reactome: R-HSA-168333;Reactome: R-HSA-4551638;Reactome: R-HSA-159230;Reactome: R-HSA-168325;Reactome: R-HSA-159231;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-170822;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-159227 "NS1 Mediated Effects on Host Pathways";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"snRNP Assembly";"Nuclear import of Rev protein";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of chromatin organization proteins";"Transport of the SLBP Dependant Mature mRNA";"Viral Messenger RNA Synthesis";"Transport of Mature mRNA Derived from an Intronless Transcript";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"HCMV Early Events";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA" ID=BGER023237-PA|Name=BGER023237-PA 11 Reactome: R-HSA-3214858;Reactome: R-HSA-2151201;Reactome: R-HSA-381340;Reactome: R-HSA-2426168;Reactome: R-HSA-400206;Reactome: R-HSA-1368108;Reactome: R-HSA-1989781;Reactome: R-HSA-1368082;Reactome: R-HSA-9018519;Reactome: R-HSA-400253;Reactome: R-HSA-6804114 "RMTs methylate histone arginines";"Transcriptional activation of mitochondrial biogenesis";"Transcriptional regulation of white adipocyte differentiation";"Activation of gene expression by SREBF (SREBP)";"Regulation of lipid metabolism by PPARalpha";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"PPARA activates gene expression";"RORA activates gene expression";"Estrogen-dependent gene expression";"Circadian Clock";"TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest" ID=BGER026903-PA|Name=BGER026903-PA 1 Reactome: R-HSA-6806664 "Metabolism of vitamin K" ID=BGER025060-PA|Name=BGER025060-PA 1 Reactome: R-HSA-8963693 "Aspartate and asparagine metabolism" ID=BGER028137-PA|Name=BGER028137-PA 1 Reactome: R-HSA-947581 "Molybdenum cofactor biosynthesis" ID=BGER017884-PA|Name=BGER017884-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER016581-PA|Name=BGER016581-PA 12 Reactome: R-HSA-156827;Reactome: R-HSA-72662;Reactome: R-HSA-72649;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-1169408;Reactome: R-HSA-429947;Reactome: R-HSA-72702;Reactome: R-HSA-166208;Reactome: R-HSA-9010553;Reactome: R-HSA-450408;Reactome: R-HSA-72706 "L13a-mediated translational silencing of Ceruloplasmin expression";"Activation of the mRNA upon binding of the cap-binding complex and eIFs, and subsequent binding to 43S";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"ISG15 antiviral mechanism";"Deadenylation of mRNA";"Ribosomal scanning and start codon recognition";"mTORC1-mediated signalling";"Regulation of expression of SLITs and ROBOs";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"GTP hydrolysis and joining of the 60S ribosomal subunit" ID=BGER011792-PA|Name=BGER011792-PA 9 Reactome: R-HSA-3560801;Reactome: R-HSA-3656253;Reactome: R-HSA-1971475;Reactome: R-HSA-4420332;Reactome: R-HSA-3656237;Reactome: R-HSA-3560783;Reactome: R-HSA-2022928;Reactome: R-HSA-2024096;Reactome: R-HSA-975634 "Defective B3GAT3 causes JDSSDHD";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"A tetrasaccharide linker sequence is required for GAG synthesis";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT2 causes exostoses 2";"Defective B4GALT7 causes EDS, progeroid type";"HS-GAG biosynthesis";"HS-GAG degradation";"Retinoid metabolism and transport" ID=BGER021780-PA|Name=BGER021780-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER002670-PA|Name=BGER002670-PA 1 Reactome: R-HSA-2465910 "MASTL Facilitates Mitotic Progression" ID=BGER003730-PA|Name=BGER003730-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" ID=BGER007515-PA|Name=BGER007515-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER026163-PA|Name=BGER026163-PA 2 Reactome: R-HSA-909733;Reactome: R-HSA-8983711 "Interferon alpha/beta signaling";"OAS antiviral response" ID=BGER011861-PA|Name=BGER011861-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER029639-PA|Name=BGER029639-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER023277-PA|Name=BGER023277-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER014932-PA|Name=BGER014932-PA 1 KEGG: 00240+3.1.3.89 "Pyrimidine metabolism" ID=BGER015229-PA|Name=BGER015229-PA 2 Reactome: R-HSA-877300;Reactome: R-HSA-2132295 "Interferon gamma signaling";"MHC class II antigen presentation" ID=BGER011569-PA|Name=BGER011569-PA 8 MetaCyc: PWY-6385;Reactome: R-HSA-156588;MetaCyc: PWY-6471;Reactome: R-HSA-5633231;KEGG: 00550+2.4.1.227;MetaCyc: PWY-6470;MetaCyc: PWY-5265;Reactome: R-HSA-446193 "Peptidoglycan biosynthesis III (mycobacteria)";"Glucuronidation";"Peptidoglycan biosynthesis IV (Enterococcus faecium)";"Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)";"Peptidoglycan biosynthesis";"Peptidoglycan biosynthesis V (beta-lactam resistance)";"Peptidoglycan biosynthesis II (staphylococci)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" ID=BGER012741-PA|Name=BGER012741-PA 4 KEGG: 00514+2.4.1.255;Reactome: R-HSA-5689603;MetaCyc: PWY-7437;Reactome: R-HSA-3214847 "Other types of O-glycan biosynthesis";"UCH proteinases";"Protein O-[N-acetyl]-glucosylation";"HATs acetylate histones" ID=BGER022105-PA|Name=BGER022105-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" ID=BGER028005-PA|Name=BGER028005-PA 3 Reactome: R-HSA-1810476;Reactome: R-HSA-933542;Reactome: R-HSA-445989 "RIP-mediated NFkB activation via ZBP1";"TRAF6 mediated NF-kB activation";"TAK1 activates NFkB by phosphorylation and activation of IKKs complex" ID=BGER008646-PA|Name=BGER008646-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER011087-PA|Name=BGER011087-PA 5 Reactome: R-HSA-199220;Reactome: R-HSA-2426168;Reactome: R-HSA-163765;Reactome: R-HSA-75105;Reactome: R-HSA-9029558 "Vitamin B5 (pantothenate) metabolism";"Activation of gene expression by SREBF (SREBP)";"ChREBP activates metabolic gene expression";"Fatty acyl-CoA biosynthesis";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis" ID=BGER013588-PA|Name=BGER013588-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER001427-PA|Name=BGER001427-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER005854-PA|Name=BGER005854-PA 7 Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-73780;Reactome: R-HSA-749476;Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73980 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Termination" ID=BGER007111-PA|Name=BGER007111-PA 1 Reactome: R-HSA-8949613 "Cristae formation" ID=BGER025076-PA|Name=BGER025076-PA 24 Reactome: R-HSA-418555;Reactome: R-HSA-392851;Reactome: R-HSA-500657;Reactome: R-HSA-6814122;Reactome: R-HSA-163359;Reactome: R-HSA-418597;Reactome: R-HSA-8964616;Reactome: R-HSA-418594;Reactome: R-HSA-381676;Reactome: R-HSA-456926;Reactome: R-HSA-416476;Reactome: R-HSA-9009391;Reactome: R-HSA-420092;Reactome: R-HSA-4086398;Reactome: R-HSA-432040;Reactome: R-HSA-392170;Reactome: R-HSA-400042;Reactome: R-HSA-8964315;Reactome: R-HSA-428930;Reactome: R-HSA-392451;Reactome: R-HSA-418592;Reactome: R-HSA-418217;Reactome: R-HSA-416482;Reactome: R-HSA-202040 "G alpha (s) signalling events";"Prostacyclin signalling through prostacyclin receptor";"Presynaptic function of Kainate receptors";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Glucagon signaling in metabolic regulation";"G alpha (z) signalling events";"G beta:gamma signalling through CDC42";"G alpha (i) signalling events";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"Thrombin signalling through proteinase activated receptors (PARs)";"G alpha (q) signalling events";"Extra-nuclear estrogen signaling";"Glucagon-type ligand receptors";"Ca2+ pathway";"Vasopressin regulates renal water homeostasis via Aquaporins";"ADP signalling through P2Y purinoceptor 12";"Adrenaline,noradrenaline inhibits insulin secretion";"G beta:gamma signalling through BTK";"Thromboxane signalling through TP receptor";"G beta:gamma signalling through PI3Kgamma";"ADP signalling through P2Y purinoceptor 1";"G beta:gamma signalling through PLC beta";"G alpha (12/13) signalling events";"G-protein activation" ID=BGER004446-PA|Name=BGER004446-PA 1 Reactome: R-HSA-163125 "Post-translational modification: synthesis of GPI-anchored proteins" ID=BGER003377-PA|Name=BGER003377-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER001429-PA|Name=BGER001429-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER013009-PA|Name=BGER013009-PA 3 MetaCyc: PWY-5691;KEGG: 00230+1.7.3.3;KEGG: 00232+1.7.3.3 "Urate conversion to allantoin I";"Purine metabolism";"Caffeine metabolism" ID=BGER016028-PA|Name=BGER016028-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER029256-PA|Name=BGER029256-PA 2 Reactome: R-HSA-6807004;Reactome: R-HSA-877312 "Negative regulation of MET activity";"Regulation of IFNG signaling" ID=BGER005647-PA|Name=BGER005647-PA 1 Reactome: R-HSA-196741 "Cobalamin (Cbl, vitamin B12) transport and metabolism" ID=BGER009590-PA|Name=BGER009590-PA 5 KEGG: 00510+1.3.1.94;MetaCyc: PWY-6129;Reactome: R-HSA-193048;Reactome: R-HSA-4755579;Reactome: R-HSA-446199 "N-Glycan biosynthesis";"Dolichol and dolichyl phosphate biosynthesis";"Androgen biosynthesis";"Defective SRD5A3 causes SRD5A3-CDG (CDG-1q) and KHRZ";"Synthesis of Dolichyl-phosphate" ID=BGER002963-PA|Name=BGER002963-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER013340-PA|Name=BGER013340-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER005269-PA|Name=BGER005269-PA 1 Reactome: R-HSA-5625900 "RHO GTPases activate CIT" ID=BGER009336-PA|Name=BGER009336-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER011017-PA|Name=BGER011017-PA 7 Reactome: R-HSA-5658034;Reactome: R-HSA-5362798;Reactome: R-HSA-5635838;Reactome: R-HSA-5632684;Reactome: R-HSA-5358346;Reactome: R-HSA-5632681;Reactome: R-HSA-373080 "HHAT G278V abrogates palmitoylation of Hh-Np";"Release of Hh-Np from the secreting cell";"Activation of SMO";"Hedgehog 'on' state";"Hedgehog ligand biogenesis";"Ligand-receptor interactions";"Class B/2 (Secretin family receptors)" ID=BGER014302-PA|Name=BGER014302-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER005111-PA|Name=BGER005111-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-6804758 "HATs acetylate histones";"Regulation of TP53 Activity through Acetylation" ID=BGER010158-PA|Name=BGER010158-PA 1 Reactome: R-HSA-427601 "Multifunctional anion exchangers" ID=BGER017612-PA|Name=BGER017612-PA 4 Reactome: R-HSA-1660662;MetaCyc: PWY-6483;KEGG: 00600+3.5.1.23;MetaCyc: PWY-7119 "Glycosphingolipid metabolism";"Ceramide degradation (generic)";"Sphingolipid metabolism";"Ceramide and sphingolipid recycling and degradation (yeast)" ID=BGER020197-PA|Name=BGER020197-PA 1 Reactome: R-HSA-4551638 "SUMOylation of chromatin organization proteins" ID=BGER008511-PA|Name=BGER008511-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" ID=BGER000022-PA|Name=BGER000022-PA 3 Reactome: R-HSA-4419969;Reactome: R-HSA-2980766;Reactome: R-HSA-2995383 "Depolymerisation of the Nuclear Lamina";"Nuclear Envelope Breakdown";"Initiation of Nuclear Envelope Reformation" ID=BGER005984-PA|Name=BGER005984-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Glycosphingolipid metabolism" ID=BGER025063-PA|Name=BGER025063-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER010693-PA|Name=BGER010693-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" ID=BGER024064-PA|Name=BGER024064-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER004973-PA|Name=BGER004973-PA 6 Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450604 "ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA" ID=BGER023299-PA|Name=BGER023299-PA 2 Reactome: R-HSA-9616222;Reactome: R-HSA-381340 "Transcriptional regulation of granulopoiesis";"Transcriptional regulation of white adipocyte differentiation" ID=BGER003062-PA|Name=BGER003062-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER018960-PA|Name=BGER018960-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-6733;MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656 "Wax biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis" ID=BGER000337-PA|Name=BGER000337-PA 1 Reactome: R-HSA-156588 "Glucuronidation" ID=BGER006226-PA|Name=BGER006226-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" ID=BGER010073-PA|Name=BGER010073-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER025097-PA|Name=BGER025097-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Glycosphingolipid metabolism" ID=BGER019300-PA|Name=BGER019300-PA 1 Reactome: R-HSA-3295583 "TRP channels" ID=BGER029404-PA|Name=BGER029404-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" ID=BGER025175-PA|Name=BGER025175-PA 4 Reactome: R-HSA-6782210;Reactome: R-HSA-6781823;Reactome: R-HSA-6781827;Reactome: R-HSA-6782135 "Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER" ID=BGER012922-PA|Name=BGER012922-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" ID=BGER013471-PA|Name=BGER013471-PA 4 Reactome: R-HSA-9613829;Reactome: R-HSA-9615710;Reactome: R-HSA-9646399;Reactome: R-HSA-3899300 "Chaperone Mediated Autophagy";"Late endosomal microautophagy";"Aggrephagy";"SUMOylation of transcription cofactors" ID=BGER008930-PA|Name=BGER008930-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER020516-PA|Name=BGER020516-PA 5 Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947;Reactome: R-HSA-3214815;Reactome: R-HSA-350054 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"HDACs deacetylate histones";"Notch-HLH transcription pathway" ID=BGER000070-PA|Name=BGER000070-PA 1 Reactome: R-HSA-9603798 "Class I peroxisomal membrane protein import" ID=BGER012313-PC|Name=BGER012313-PC 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER022272-PA|Name=BGER022272-PA 1 Reactome: R-HSA-70171 "Glycolysis" ID=BGER016040-PA|Name=BGER016040-PA 3 KEGG: 00970+6.1.1.4;Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" ID=BGER029662-PA|Name=BGER029662-PA 11 Reactome: R-HSA-6811436;Reactome: R-HSA-380320;Reactome: R-HSA-8854518;Reactome: R-HSA-380259;Reactome: R-HSA-3371497;Reactome: R-HSA-2565942;Reactome: R-HSA-380270;Reactome: R-HSA-6807878;Reactome: R-HSA-2132295;Reactome: R-HSA-380284;Reactome: R-HSA-5620912 "COPI-independent Golgi-to-ER retrograde traffic";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2";"Loss of Nlp from mitotic centrosomes";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of mitotic centrosome proteins and complexes";"COPI-mediated anterograde transport";"MHC class II antigen presentation";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane" ID=BGER011695-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER012288-PA|Name=BGER012288-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER015469-PA|Name=BGER015469-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" ID=BGER028542-PA|Name=BGER028542-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-1660662 "Neutrophil degranulation";"Glycosphingolipid metabolism" ID=BGER008316-PA|Name=BGER008316-PA 2 Reactome: R-HSA-8866654;MetaCyc: PWY-7511 "E3 ubiquitin ligases ubiquitinate target proteins";"Protein ubiquitination" ID=BGER002809-PA|Name=BGER002809-PA 1 KEGG: 00480+3.4.11.2 "Glutathione metabolism" ID=BGER019761-PA|Name=BGER019761-PA 13 Reactome: R-HSA-2160916;Reactome: R-HSA-2022857;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;Reactome: R-HSA-2024101;KEGG: 00531+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;KEGG: 00513+3.2.1.52;MetaCyc: PWY-6902;Reactome: R-HSA-1660662;MetaCyc: PWY-7822;KEGG: 00520+3.2.1.52 "Hyaluronan uptake and degradation";"Keratan sulfate degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"CS/DS degradation";"Glycosaminoglycan degradation";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Various types of N-glycan biosynthesis";"Chitin degradation II (Vibrio)";"Glycosphingolipid metabolism";"Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism" ID=BGER008942-PA|Name=BGER008942-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER028278-PA|Name=BGER028278-PA 1 Reactome: R-HSA-1221632 "Meiotic synapsis" ID=BGER002586-PA|Name=BGER002586-PA 3 MetaCyc: PWY-6117;KEGG: 00330+2.3.1.57;MetaCyc: PWY-0 "Spermine and spermidine degradation I";"Arginine and proline metabolism";"Putrescine degradation III" ID=BGER005227-PA|Name=BGER005227-PA 20 Reactome: R-HSA-110314;Reactome: R-HSA-5693607;Reactome: R-HSA-5696400;Reactome: R-HSA-69091;Reactome: R-HSA-174411;Reactome: R-HSA-5693616;Reactome: R-HSA-5656121;Reactome: R-HSA-6782210;Reactome: R-HSA-5685938;Reactome: R-HSA-5656169;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-69473;Reactome: R-HSA-176187;Reactome: R-HSA-6804756;Reactome: R-HSA-6782135;Reactome: R-HSA-5651801;Reactome: R-HSA-5655862;Reactome: R-HSA-5696397;Reactome: R-HSA-110312 "Recognition of DNA damage by PCNA-containing replication complex";"Processing of DNA double-strand break ends";"Dual Incision in GG-NER";"Polymerase switching";"Polymerase switching on the C-strand of the telomere";"Presynaptic phase of homologous DNA pairing and strand exchange";"Translesion synthesis by POLI";"Gap-filling DNA repair synthesis and ligation in TC-NER";"HDR through Single Strand Annealing (SSA)";"Termination of translesion DNA synthesis";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"G2/M DNA damage checkpoint";"Activation of ATR in response to replication stress";"Regulation of TP53 Activity through Phosphorylation";"Dual incision in TC-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Translesion synthesis by REV1" ID=BGER013687-PA|Name=BGER013687-PA 5 Reactome: R-HSA-73863;Reactome: R-HSA-73762;Reactome: R-HSA-73772;Reactome: R-HSA-427413;Reactome: R-HSA-5250924 "RNA Polymerase I Transcription Termination";"RNA Polymerase I Transcription Initiation";"RNA Polymerase I Promoter Escape";"NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression" ID=BGER026490-PA|Name=BGER026490-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER016910-PA|Name=BGER016910-PA 3 Reactome: R-HSA-189451;KEGG: 00860+1.3.3.4;MetaCyc: PWY-7159 "Heme biosynthesis";"Porphyrin and chlorophyll metabolism";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)" ID=BGER020278-PA|Name=BGER020278-PA 1 Reactome: R-HSA-9617828 "FOXO-mediated transcription of cell cycle genes" ID=BGER025310-PA|Name=BGER025310-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" ID=BGER024860-PA|Name=BGER024860-PA 1 Reactome: R-HSA-77289 "Mitochondrial Fatty Acid Beta-Oxidation" ID=BGER025958-PA|Name=BGER025958-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER019236-PA|Name=BGER019236-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER026671-PA|Name=BGER026671-PA 17 Reactome: R-HSA-112382;Reactome: R-HSA-6796648;KEGG: 05235+3.1.3.16;Reactome: R-HSA-167246;KEGG: 04660+3.1.3.16;Reactome: R-HSA-674695;Reactome: R-HSA-167242;Reactome: R-HSA-75955;Reactome: R-HSA-167243;Reactome: R-HSA-113418;KEGG: 04658+3.1.3.16;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167152;Reactome: R-HSA-167290;Reactome: R-HSA-167287;Reactome: R-HSA-167200 "Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Tat-mediated elongation of the HIV-1 transcript";"T cell receptor signaling pathway";"RNA Polymerase II Pre-transcription Events";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Transcription Elongation";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Th1 and Th2 cell differentiation";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Formation of HIV elongation complex in the absence of HIV Tat";"Pausing and recovery of HIV elongation";"HIV elongation arrest and recovery";"Formation of HIV-1 elongation complex containing HIV-1 Tat" ID=BGER028420-PA|Name=BGER028420-PA 7 Reactome: R-HSA-2122948;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-2644606;Reactome: R-HSA-9013507;Reactome: R-HSA-2691232;MetaCyc: PWY-7511 "Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Protein ubiquitination" ID=BGER024854-PA|Name=BGER024854-PA 5 KEGG: 00670+1.5.1.3;KEGG: 00790+1.5.1.3;MetaCyc: PWY-6614;MetaCyc: PWY-3841;Reactome: R-HSA-196757 "One carbon pool by folate";"Folate biosynthesis";"Tetrahydrofolate biosynthesis";"Folate transformations II (plants)";"Metabolism of folate and pterines" ID=BGER024447-PA|Name=BGER024447-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" ID=BGER010719-PA|Name=BGER010719-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER011351-PA|Name=BGER011351-PA 2 KEGG: 00500+3.2.1.26;KEGG: 00052+3.2.1.26 "Starch and sucrose metabolism";"Galactose metabolism" ID=BGER018097-PA|Name=BGER018097-PA 4 Reactome: R-HSA-1632852;Reactome: R-HSA-8934903;Reactome: R-HSA-5205685;Reactome: R-HSA-936440 "Macroautophagy";"Receptor Mediated Mitophagy";"Pink/Parkin Mediated Mitophagy";"Negative regulators of DDX58/IFIH1 signaling" ID=BGER029807-PA|Name=BGER029807-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER026115-PA|Name=BGER026115-PA 2 KEGG: 00500+3.2.1.28;Reactome: R-HSA-189085 "Starch and sucrose metabolism";"Digestion of dietary carbohydrate" ID=BGER011787-PA|Name=BGER011787-PA 16 Reactome: R-HSA-72702;Reactome: R-HSA-6791226;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72649;Reactome: R-HSA-9633012;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-72764 "Ribosomal scanning and start codon recognition";"Major pathway of rRNA processing in the nucleolus and cytosol";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Translation initiation complex formation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination" ID=BGER000114-PA|Name=BGER000114-PA 15 KEGG: 00230+2.7.1.40;MetaCyc: PWY-2221;MetaCyc: PWY-5484;MetaCyc: PWY-7003;MetaCyc: PWY-6142;KEGG: 00620+2.7.1.40;MetaCyc: PWY-6901;MetaCyc: PWY-1042;KEGG: 00010+2.7.1.40;MetaCyc: PWY-7383;Reactome: R-HSA-70171;MetaCyc: PWY-7218;MetaCyc: PWY-8004;MetaCyc: PWY-6886;MetaCyc: PWY-5723 "Purine metabolism";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Glycolysis II (from fructose 6-phosphate)";"Glycerol degradation to butanol";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Pyruvate metabolism";"Superpathway of glucose and xylose degradation";"Glycolysis IV (plant cytosol)";"Glycolysis / Gluconeogenesis";"Anaerobic energy metabolism (invertebrates, cytosol)";"Glycolysis";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Entner-Doudoroff pathway I";"1-butanol autotrophic biosynthesis (engineered)";"Rubisco shunt" ID=BGER022808-PA|Name=BGER022808-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER023344-PA|Name=BGER023344-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER026954-PA|Name=BGER026954-PA 2 KEGG: 00970+6.3.5.7;Reactome: R-HSA-2142753 "Aminoacyl-tRNA biosynthesis";"Arachidonic acid metabolism" ID=BGER024623-PA|Name=BGER024623-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER004363-PA|Name=BGER004363-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER011697-PA|Name=EcKinase 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER029934-PA|Name=BGER029934-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER021497-PA|Name=BGER021497-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" ID=BGER016181-PA|Name=BGER016181-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER019905-PA|Name=BGER019905-PA 2 KEGG: 00511+3.2.1.24;Reactome: R-HSA-8853383 "Other glycan degradation";"Lysosomal oligosaccharide catabolism" ID=BGER013026-PA|Name=BGER013026-PA 1 Reactome: R-HSA-8951664 "Neddylation" ID=BGER015472-PA|Name=BGER015472-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-1989781 "Transcriptional activation of mitochondrial biogenesis";"PPARA activates gene expression" ID=BGER002744-PA|Name=BGER002744-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" ID=BGER005850-PA|Name=BGER005850-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" ID=BGER029882-PA|Name=BGER029882-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" ID=BGER006661-PA|Name=BGER006661-PA 8 Reactome: R-HSA-174411;Reactome: R-HSA-69091;Reactome: R-HSA-69166;Reactome: R-HSA-68952;Reactome: R-HSA-68962;Reactome: R-HSA-113501;Reactome: R-HSA-174430;Reactome: R-HSA-69183 "Polymerase switching on the C-strand of the telomere";"Polymerase switching";"Removal of the Flap Intermediate";"DNA replication initiation";"Activation of the pre-replicative complex";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Telomere C-strand synthesis initiation";"Processive synthesis on the lagging strand" ID=BGER019317-PA|Name=BGER019317-PA 3 Reactome: R-HSA-6799198;Reactome: R-HSA-611105;Reactome: R-HSA-8876198 "Complex I biogenesis";"Respiratory electron transport";"RAB GEFs exchange GTP for GDP on RABs" ID=BGER004534-PA|Name=BGER004534-PA 14 MetaCyc: PWY-7601;MetaCyc: PWY-7035;MetaCyc: PWY-7602;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7619;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-6433;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-7725;MetaCyc: PWY-7036;MetaCyc: PWY-8041 "Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"(9Z)-tricosene biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Very long chain fatty acid biosynthesis II";"Ultra-long-chain fatty acid biosynthesis" ID=BGER008843-PA|Name=BGER008843-PA 4 Reactome: R-HSA-446199;Reactome: R-HSA-4755609;KEGG: 00900+2.5.1.87;MetaCyc: PWY-6129 "Synthesis of Dolichyl-phosphate";"Defective DHDDS causes retinitis pigmentosa 59";"Terpenoid backbone biosynthesis";"Dolichol and dolichyl phosphate biosynthesis" ID=BGER017287-PA|Name=BGER017287-PA 1 Reactome: R-HSA-2393930 "Phosphate bond hydrolysis by NUDT proteins" ID=BGER000212-PA|Name=BGER000212-PA 13 MetaCyc: PWY-5497;MetaCyc: PWY-2161;MetaCyc: PWY-5030;Reactome: R-HSA-196757;MetaCyc: PWY-3841;KEGG: 00720+1.5.1.5+3.5.4.9;MetaCyc: PWY-7909;KEGG: 00670+6.3.4.3;MetaCyc: PWY-2201;MetaCyc: PWY-1722;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-6613;KEGG: 00720+6.3.4.3 "Purine nucleobases degradation II (anaerobic)";"Folate polyglutamylation";"L-histidine degradation III";"Metabolism of folate and pterines";"Folate transformations II (plants)";"Carbon fixation pathways in prokaryotes";"Formaldehyde oxidation VII (THF pathway)";"One carbon pool by folate";"Folate transformations I";"Formate assimilation into 5,10-methylenetetrahydrofolate";"One carbon pool by folate";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Carbon fixation pathways in prokaryotes" ID=BGER022904-PA|Name=BGER022904-PA 4 MetaCyc: PWY-7219;KEGG: 00230+2.7.4.3;KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943 "Adenosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates" ID=BGER023464-PA|Name=BGER023464-PA 13 Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-1799339;Reactome: R-HSA-2408557;Reactome: R-HSA-72689;Reactome: R-HSA-975957;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-156902 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"SRP-dependent cotranslational protein targeting to membrane";"Selenocysteine synthesis";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Peptide chain elongation" ID=BGER019767-PA|Name=BGER019767-PA 3 Reactome: R-HSA-8866654;Reactome: R-HSA-9033241;Reactome: R-HSA-9603798 "E3 ubiquitin ligases ubiquitinate target proteins";"Peroxisomal protein import";"Class I peroxisomal membrane protein import" ID=BGER016510-PA|Name=BGER016510-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" ID=BGER014167-PA|Name=BGER014167-PA 2 MetaCyc: PWY-7851;KEGG: 00770+2.7.1.24 "Coenzyme A biosynthesis II (eukaryotic)";"Pantothenate and CoA biosynthesis" ID=BGER009455-PA|Name=BGER009455-PA 2 Reactome: R-HSA-6783310;MetaCyc: PWY-7511 "Fanconi Anemia Pathway";"Protein ubiquitination" ID=BGER024326-PA|Name=BGER024326-PA 2 Reactome: R-HSA-70350;Reactome: R-HSA-168928 "Fructose catabolism";"DDX58/IFIH1-mediated induction of interferon-alpha/beta" ID=BGER013763-PA|Name=BGER013763-PA 3 Reactome: R-HSA-264876;Reactome: R-HSA-1445148;Reactome: R-HSA-5620916 "Insulin processing";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"VxPx cargo-targeting to cilium" ID=BGER023041-PA|Name=BGER023041-PA 42 MetaCyc: PWY-7401;KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35;MetaCyc: PWY-7778;KEGG: 00623+1.1.1.35;MetaCyc: PWY-6435;MetaCyc: PWY-1361;MetaCyc: PWY-7726;MetaCyc: PWY-6863;KEGG: 00640+4.2.1.17;MetaCyc: PWY-7216;KEGG: 00592+4.2.1.17;KEGG: 00062+4.2.1.17+1.1.1.35;MetaCyc: PWY-5138;MetaCyc: PWY-7007;KEGG: 00903+4.2.1.17;KEGG: 00280+4.2.1.17+1.1.1.35;KEGG: 00930+4.2.1.17+1.1.1.35;KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35;MetaCyc: PWY-5177;MetaCyc: PWY-6944;MetaCyc: PWY-6583;MetaCyc: PWY-5109;KEGG: 00362+4.2.1.17+1.1.1.35;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-6883;MetaCyc: PWY-5136;MetaCyc: PWY-7656;KEGG: 00071+4.2.1.17+1.1.1.35;MetaCyc: PWY-6946;KEGG: 00380+4.2.1.17+1.1.1.35;MetaCyc: PWY-7606;KEGG: 00310+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17;KEGG: 00720+4.2.1.17+1.1.1.35;MetaCyc: PWY-7654;MetaCyc: PWY-7094;KEGG: 00360+4.2.1.17;MetaCyc: PWY-5789;MetaCyc: PWY-6945;KEGG: 00281+4.2.1.17+1.1.1.35;MetaCyc: PWY-7779;KEGG: 00410+4.2.1.17 "Crotonate fermentation (to acetate and cyclohexane carboxylate)";"Butanoate metabolism";"2-methylpropene degradation";"Toluene degradation";"4-hydroxybenzoate biosynthesis III (plants)";"Benzoyl-coa degradation I (aerobic)";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Pyruvate fermentation to hexanol (engineered)";"Propanoate metabolism";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"Fatty acid elongation";"Fatty acid beta-oxidation IV (unsaturated, even number)";"Methyl ketone biosynthesis (engineered)";"Limonene and pinene degradation";"Valine, leucine and isoleucine degradation";"Caprolactam degradation";"Fatty acid degradation";"Glutaryl-coa degradation";"Androstenedione degradation";"Pyruvate fermentation to butanol I";"Fermentation to 2-methylbutanoate";"Benzoate degradation";"Butanoate metabolism";"Pyruvate fermentation to butanol II (engineered)";"Fatty acid beta-oxidation II (plant peroxisome)";"Spodoptera littoralis pheromone biosynthesis";"Fatty acid degradation";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Tryptophan metabolism";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Lysine degradation";"Aminobenzoate degradation";"Carbon fixation pathways in prokaryotes";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Fatty acid salvage";"Phenylalanine metabolism";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"Geraniol degradation";"Methyl tert-butyl ether degradation";"beta-Alanine metabolism" ID=BGER013623-PA|Name=BGER013623-PA 1 Reactome: R-HSA-5685939 "HDR through MMEJ (alt-NHEJ)" ID=BGER022884-PA|Name=BGER022884-PA 2 Reactome: R-HSA-74217;KEGG: 00230+1.7.1.7 "Purine salvage";"Purine metabolism" ID=BGER017995-PA|Name=BGER017995-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-1268020 "Cristae formation";"Mitochondrial protein import" ID=BGER017777-PA|Name=BGER017777-PA 9 Reactome: R-HSA-5693607;Reactome: R-HSA-5693579;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5685938;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554 "Processing of DNA double-strand break ends";"Homologous DNA Pairing and Strand Exchange";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Single Strand Annealing (SSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" ID=BGER013634-PA|Name=BGER013634-PA 16 Reactome: R-HSA-1257604;Reactome: R-HSA-912526;Reactome: R-HSA-114604;Reactome: R-HSA-912631;Reactome: R-HSA-1266695;Reactome: R-HSA-8853659;Reactome: R-HSA-194840;Reactome: R-HSA-1660499;Reactome: R-HSA-2219530;Reactome: R-HSA-389357;Reactome: R-HSA-416476;Reactome: R-HSA-9009391;Reactome: R-HSA-1433557;Reactome: R-HSA-388841;Reactome: R-HSA-512988;Reactome: R-HSA-6811558 "PIP3 activates AKT signaling";"Interleukin receptor SHC signaling";"GPVI-mediated activation cascade";"Regulation of signaling by CBL";"Interleukin-7 signaling";"RET signaling";"Rho GTPase cycle";"Synthesis of PIPs at the plasma membrane";"Constitutive Signaling by Aberrant PI3K in Cancer";"CD28 dependent PI3K/Akt signaling";"G alpha (q) signalling events";"Extra-nuclear estrogen signaling";"Signaling by SCF-KIT";"Costimulation by the CD28 family";"Interleukin-3, Interleukin-5 and GM-CSF signaling";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling" ID=BGER001021-PA|Name=BGER001021-PA 13 MetaCyc: PWY-7659;MetaCyc: PWY-5122;MetaCyc: PWY-7410;MetaCyc: PWY-7102;MetaCyc: PWY-7141;MetaCyc: PWY-6859;MetaCyc: PWY-7709;KEGG: 00900+2.5.1.10+2.5.1.1;MetaCyc: PWY-7721;MetaCyc: PWY-6383;MetaCyc: PWY-7736;MetaCyc: PWY-7182;MetaCyc: PWY-5123 "Viridicatumtoxin biosynthesis";"Geranyl diphosphate biosynthesis";"Ipsdienol biosynthesis";"Bisabolene biosynthesis (engineered)";"(3S)-linalool biosynthesis";"All-trans-farnesol biosynthesis";"(3R)-linalool biosynthesis";"Terpenoid backbone biosynthesis";"Methyl phomopsenoate biosynthesis";"Mono-trans, poly-cis decaprenyl phosphate biosynthesis";"Stellatic acid biosynthesis";"Linalool biosynthesis I";"Trans, trans-farnesyl diphosphate biosynthesis" ID=BGER022278-PA|Name=BGER022278-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" ID=BGER017454-PA|Name=BGER017454-PA 1 Reactome: R-HSA-2467813 "Separation of Sister Chromatids" ID=BGER011505-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER023101-PA|Name=BGER023101-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" ID=BGER015037-PA|Name=BGER015037-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" ID=BGER000937-PA|Name=BGER000937-PA 1 Reactome: R-HSA-111465 "Apoptotic cleavage of cellular proteins" ID=BGER011414-PA|Name=BGER011414-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" ID=BGER017346-PA|Name=BGER017346-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER010677-PA|Name=BGER010677-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER012783-PA|Name=BGER012783-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" ID=BGER007635-PA|Name=BGER007635-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" ID=BGER021156-PA|Name=BGER021156-PA 14 MetaCyc: PWY-5981;MetaCyc: PWY-7587;MetaCyc: PWY-5667;MetaCyc: PWY-8055;Reactome: R-HSA-1483166;KEGG: 00564+2.3.1.51;MetaCyc: PWY-8053;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7589;MetaCyc: PWY-7417;MetaCyc: PWY-6453;MetaCyc: PWY-7782;MetaCyc: PWY-7411;MetaCyc: PWY-8051 "CDP-diacylglycerol biosynthesis III";"Oleate biosynthesis III (cyanobacteria)";"CDP-diacylglycerol biosynthesis I";"Palmitoyl ethanolamide biosynthesis";"Synthesis of PA";"Glycerophospholipid metabolism";"Anandamide biosynthesis II";"Glycerolipid metabolism";"Palmitoleate biosynthesis III (cyanobacteria)";"Phospholipid remodeling (phosphatidate, yeast)";"Stigma estolide biosynthesis";"Plasmalogen biosynthesis";"Phosphatidate biosynthesis (yeast)";"Anandamide biosynthesis I" ID=BGER005438-PA|Name=BGER005438-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" ID=BGER027422-PA|Name=BGER027422-PA 1 Reactome: R-HSA-9633012 "Response of EIF2AK4 (GCN2) to amino acid deficiency" ID=BGER020254-PA|Name=BGER020254-PA 3 MetaCyc: PWY-6558;KEGG: 00534+5.1.3.17;Reactome: R-HSA-2022928 "Heparan sulfate biosynthesis (late stages)";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin";"HS-GAG biosynthesis" ID=BGER017916-PA|Name=BGER017916-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER022402-PA|Name=BGER022402-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" ID=BGER025178-PA|Name=BGER025178-PA 9 Reactome: R-HSA-167161;Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-6804756;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-73779;Reactome: R-HSA-167172;Reactome: R-HSA-76042 "HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance" ID=BGER015134-PA|Name=BGER015134-PA 5 Reactome: R-HSA-212300;Reactome: R-HSA-427413;Reactome: R-HSA-5334118;KEGG: 00270+2.1.1.37;Reactome: R-HSA-4655427 "PRC2 methylates histones and DNA";"NoRC negatively regulates rRNA expression";"DNA methylation";"Cysteine and methionine metabolism";"SUMOylation of DNA methylation proteins" ID=BGER022529-PA|Name=BGER022529-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER009070-PA|Name=BGER009070-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER019917-PA|Name=BGER019917-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" ID=BGER005539-PA|Name=BGER005539-PA 3 Reactome: R-HSA-5694530;Reactome: R-HSA-204005;Reactome: R-HSA-948021 "Cargo concentration in the ER";"COPII-mediated vesicle transport";"Transport to the Golgi and subsequent modification" ID=BGER013414-PA|Name=BGER013414-PA 5 Reactome: R-HSA-1912420;Reactome: R-HSA-1912408;Reactome: R-HSA-350054;Reactome: R-HSA-1912399;Reactome: R-HSA-5083630 "Pre-NOTCH Processing in Golgi";"Pre-NOTCH Transcription and Translation";"Notch-HLH transcription pathway";"Pre-NOTCH Processing in the Endoplasmic Reticulum";"Defective LFNG causes SCDO3" ID=BGER026907-PA|Name=BGER026907-PA 5 Reactome: R-HSA-917937;Reactome: R-HSA-5619060;Reactome: R-HSA-425410;Reactome: R-HSA-5655799;Reactome: R-HSA-5619049 "Iron uptake and transport";"Defective CP causes aceruloplasminemia (ACERULOP)";"Metal ion SLC transporters";"Defective SLC40A1 causes hemochromatosis 4 (HFE4) (duodenum)";"Defective SLC40A1 causes hemochromatosis 4 (HFE4) (macrophages)" ID=BGER017762-PA|Name=BGER017762-PA 1 MetaCyc: PWY-7379 "Mrna capping II" ID=BGER027230-PA|Name=BGER027230-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" ID=BGER007100-PA|Name=BGER007100-PA 5 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;Reactome: R-HSA-112409;KEGG: 04660+3.1.3.16;Reactome: R-HSA-5675221 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"RAF-independent MAPK1/3 activation";"T cell receptor signaling pathway";"Negative regulation of MAPK pathway" ID=BGER015299-PA|Name=BGER015299-PA 1 Reactome: R-HSA-3000471 "Scavenging by Class B Receptors" ID=BGER023451-PA|Name=BGER023451-PA 7 Reactome: R-HSA-9018519;Reactome: R-HSA-2500257;Reactome: R-HSA-2468052;Reactome: R-HSA-3108214;Reactome: R-HSA-2470946;Reactome: R-HSA-1221632;Reactome: R-HSA-2467813 "Estrogen-dependent gene expression";"Resolution of Sister Chromatid Cohesion";"Establishment of Sister Chromatid Cohesion";"SUMOylation of DNA damage response and repair proteins";"Cohesin Loading onto Chromatin";"Meiotic synapsis";"Separation of Sister Chromatids" ID=BGER013480-PA|Name=BGER013480-PA 56 Reactome: R-HSA-187577;Reactome: R-HSA-450408;Reactome: R-HSA-68949;Reactome: R-HSA-1234176;Reactome: R-HSA-8948751;Reactome: R-HSA-69017;Reactome: R-HSA-195253;Reactome: R-HSA-8951664;Reactome: R-HSA-1236978;Reactome: R-HSA-5689880;Reactome: R-HSA-4641258;Reactome: R-HSA-5362768;Reactome: R-HSA-983168;Reactome: R-HSA-69601;Reactome: R-HSA-8854050;Reactome: R-HSA-349425;Reactome: R-HSA-68827;Reactome: R-HSA-5607764;Reactome: R-HSA-5689603;Reactome: R-HSA-1169091;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-1236974;Reactome: R-HSA-382556;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5632684;Reactome: R-HSA-5678895;Reactome: R-HSA-174184;Reactome: R-HSA-5658442;Reactome: R-HSA-174154;Reactome: R-HSA-8941858;Reactome: R-HSA-8852276;Reactome: R-HSA-180585;Reactome: R-HSA-69481;Reactome: R-HSA-5610780;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-211733;Reactome: R-HSA-174113;Reactome: R-HSA-174084;Reactome: R-HSA-202424;Reactome: R-HSA-9020702;Reactome: R-HSA-4608870;Reactome: R-HSA-180534;Reactome: R-HSA-5676590;Reactome: R-HSA-8939236;Reactome: R-HSA-5687128;Reactome: R-HSA-9010553;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-4641257;Reactome: R-HSA-2467813 "SCF(Skp2)-mediated degradation of p27/p21";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Orc1 removal from chromatin";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of PTEN stability and activity";"CDK-mediated phosphorylation and removal of Cdc6";"Degradation of beta-catenin by the destruction complex";"Neddylation";"Cross-presentation of soluble exogenous antigens (endosomes)";"Ub-specific processing proteases";"Degradation of DVL";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Antigen processing: Ubiquitination & Proteasome degradation";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of the E3 ubiquitin ligase COP1";"CDT1 association with the CDC6:ORC:origin complex";"CLEC7A (Dectin-1) signaling";"UCH proteinases";"Activation of NF-kappaB in B cells";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"ER-Phagosome pathway";"ABC-family proteins mediated transport";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Hedgehog 'on' state";"Defective CFTR causes cystic fibrosis";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Regulation of RAS by GAPs";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of RUNX3 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vif-mediated degradation of APOBEC3G";"G2/M Checkpoints";"Degradation of GLI1 by the proteasome";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Autodegradation of Cdh1 by Cdh1:APC/C";"Downstream TCR signaling";"Interleukin-1 signaling";"Asymmetric localization of PCP proteins";"Vpu mediated degradation of CD4";"NIK-->noncanonical NF-kB signaling";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"MAPK6/MAPK4 signaling";"Regulation of expression of SLITs and ROBOs";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Degradation of AXIN";"Separation of Sister Chromatids" ID=BGER023204-PA|Name=BGER023204-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-72702 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition" ID=BGER009354-PA|Name=BGER009354-PA 37 Reactome: R-HSA-159236;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-2132295;Reactome: R-HSA-1169408;Reactome: R-HSA-9609690;Reactome: R-HSA-4615885;Reactome: R-HSA-180910;Reactome: R-HSA-191859;Reactome: R-HSA-5619107;Reactome: R-HSA-2500257;Reactome: R-HSA-180746;Reactome: R-HSA-983170;Reactome: R-HSA-168333;Reactome: R-HSA-9639288;Reactome: R-HSA-159230;Reactome: R-HSA-2467813;Reactome: R-HSA-204005;Reactome: R-HSA-3232142;Reactome: R-HSA-3108214;Reactome: R-HSA-5578749;Reactome: R-HSA-170822;Reactome: R-HSA-68877;Reactome: R-HSA-4085377;Reactome: R-HSA-3371453;Reactome: R-HSA-159227;Reactome: R-HSA-168276;Reactome: R-HSA-9610379;Reactome: R-HSA-141444;Reactome: R-HSA-9648025;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-168325;Reactome: R-HSA-5663220;Reactome: R-HSA-6784531;Reactome: R-HSA-4570464;Reactome: R-HSA-168271 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"MHC class II antigen presentation";"ISG15 antiviral mechanism";"HCMV Early Events";"SUMOylation of DNA replication proteins";"Vpr-mediated nuclear import of PICs";"snRNP Assembly";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Resolution of Sister Chromatid Cohesion";"Nuclear import of Rev protein";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"NEP/NS2 Interacts with the Cellular Export Machinery";"Amino acids regulate mTORC1";"Transport of the SLBP Dependant Mature mRNA";"Separation of Sister Chromatids";"COPII-mediated vesicle transport";"SUMOylation of ubiquitinylation proteins";"SUMOylation of DNA damage response and repair proteins";"Transcriptional regulation by small RNAs";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Mitotic Prometaphase";"SUMOylation of SUMOylation proteins";"Regulation of HSF1-mediated heat shock response";"Transport of the SLBP independent Mature mRNA";"NS1 Mediated Effects on Host Pathways";"HCMV Late Events";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"EML4 and NUDC in mitotic spindle formation";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Viral Messenger RNA Synthesis";"RHO GTPases Activate Formins";"tRNA processing in the nucleus";"SUMOylation of RNA binding proteins";"Transport of Ribonucleoproteins into the Host Nucleus" ID=BGER028923-PA|Name=BGER028923-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" ID=BGER002689-PA|Name=BGER002689-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" ID=BGER000915-PA|Name=BGER000915-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER003791-PA|Name=BGER003791-PA 11 KEGG: 00760+3.6.1.9;KEGG: 00740+3.6.1.9;MetaCyc: PWY-7187;KEGG: 00230+3.6.1.9;MetaCyc: PWY-7821;KEGG: 00240+3.6.1.9;MetaCyc: PWY-7206;MetaCyc: PWY-6545;KEGG: 00500+3.6.1.9;KEGG: 00770+3.6.1.9;MetaCyc: PWY-7184 "Nicotinate and nicotinamide metabolism";"Riboflavin metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Purine metabolism";"Tunicamycin biosynthesis";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides dephosphorylation";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Starch and sucrose metabolism";"Pantothenate and CoA biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis I" ID=BGER005303-PA|Name=BGER005303-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" ID=BGER000596-PA|Name=BGER000596-PA 1 Reactome: R-HSA-204626 "Hypusine synthesis from eIF5A-lysine" ID=BGER023482-PA|Name=BGER023482-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" ID=BGER010321-PA|Name=BGER010321-PA 2 Reactome: R-HSA-5610787;Reactome: R-HSA-5620924 "Hedgehog 'off' state";"Intraflagellar transport" ID=BGER003191-PA|Name=BGER003191-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" ID=BGER027599-PA|Name=BGER027599-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-5576893 "Phase 0 - rapid depolarisation";"Phase 2 - plateau phase" ID=BGER007443-PB|Name=BGER007443-PB 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" ID=BGER007700-PA|Name=BGER007700-PA 26 Reactome: R-HSA-918233;Reactome: R-HSA-2894862;Reactome: R-HSA-400253;Reactome: R-HSA-2644606;Reactome: R-HSA-1989781;Reactome: R-HSA-9018519;Reactome: R-HSA-933541;Reactome: R-HSA-9614657;Reactome: R-HSA-3214847;Reactome: R-HSA-5621575;Reactome: R-HSA-1234158;Reactome: R-HSA-2122947;Reactome: R-HSA-8941856;Reactome: R-HSA-9013695;Reactome: R-HSA-5617472;Reactome: R-HSA-3371568;Reactome: R-HSA-9617629;Reactome: R-HSA-210744;Reactome: R-HSA-1368082;Reactome: R-HSA-8866907;Reactome: R-HSA-1912408;Reactome: R-HSA-3134973;Reactome: R-HSA-201722;Reactome: R-HSA-9013508;Reactome: R-HSA-3899300;Reactome: R-HSA-381340 "TRAF3-dependent IRF activation pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Circadian Clock";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"PPARA activates gene expression";"Estrogen-dependent gene expression";"TRAF6 mediated IRF7 activation";"FOXO-mediated transcription of cell death genes";"HATs acetylate histones";"CD209 (DC-SIGN) signaling";"Regulation of gene expression by Hypoxia-inducible Factor";"NOTCH1 Intracellular Domain Regulates Transcription";"RUNX3 regulates NOTCH signaling";"NOTCH4 Intracellular Domain Regulates Transcription";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Attenuation phase";"Regulation of FOXO transcriptional activity by acetylation";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"RORA activates gene expression";"Activation of the TFAP2 (AP-2) family of transcription factors";"Pre-NOTCH Transcription and Translation";"LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production";"Formation of the beta-catenin:TCF transactivating complex";"NOTCH3 Intracellular Domain Regulates Transcription";"SUMOylation of transcription cofactors";"Transcriptional regulation of white adipocyte differentiation" ID=BGER010387-PA|Name=BGER010387-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-8876198;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"RAB GEFs exchange GTP for GDP on RABs";"Intra-Golgi traffic" ID=BGER014280-PA|Name=BGER014280-PA 6 Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450385 "mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA" ID=BGER018079-PA|Name=BGER018079-PA 3 Reactome: R-HSA-5696395;Reactome: R-HSA-5696400;Reactome: R-HSA-6782135 "Formation of Incision Complex in GG-NER";"Dual Incision in GG-NER";"Dual incision in TC-NER" ID=BGER023107-PA|Name=BGER023107-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER001435-PA|Name=BGER001435-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER005313-PA|Name=BGER005313-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" ID=BGER028279-PA|Name=BGER028279-PA 1 Reactome: R-HSA-400253 "Circadian Clock" ID=BGER006789-PA|Name=BGER006789-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" ID=BGER000977-PA|Name=BGER000977-PA 5 KEGG: 00600+3.2.1.22;KEGG: 00603+3.2.1.22;KEGG: 00561+3.2.1.22;KEGG: 00052+3.2.1.22;MetaCyc: PWY-6527 "Sphingolipid metabolism";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Glycerolipid metabolism";"Galactose metabolism";"Stachyose degradation" ID=BGER022379-PA|Name=BGER022379-PA 3 KEGG: 00130+1.17.4.4;MetaCyc: PWY-7999;Reactome: R-HSA-6806664 "Ubiquinone and other terpenoid-quinone biosynthesis";"Vitamin K-epoxide cycle";"Metabolism of vitamin K" ID=BGER029537-PA|Name=BGER029537-PA 3 KEGG: 00590+1.14.99.1;Reactome: R-HSA-2162123;Reactome: R-HSA-140180 "Arachidonic acid metabolism";"Synthesis of Prostaglandins (PG) and Thromboxanes (TX)";"COX reactions" ID=BGER000270-PA|Name=BGER000270-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" ID=BGER006629-PA|Name=BGER006629-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" ID=BGER017254-PA|Name=BGER017254-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" ID=BGER016331-PA|Name=BGER016331-PA 4 MetaCyc: PWY-4361;MetaCyc: PWY-7174;KEGG: 00270+5.3.1.23;Reactome: R-HSA-1237112 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II";"Cysteine and methionine metabolism";"Methionine salvage pathway" ID=BGER013410-PA|Name=BGER013410-PA 1 Reactome: R-HSA-212300 "PRC2 methylates histones and DNA" ID=BGER013552-PA|Name=BGER013552-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER018063-PA|Name=BGER018063-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER004481-PA|Name=BGER004481-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" ID=BGER026944-PA|Name=BGER026944-PA 6 Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-450513;Reactome: R-HSA-450604;Reactome: R-HSA-429958;Reactome: R-HSA-6791226 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER028120-PA|Name=BGER028120-PA 1 Reactome: R-HSA-9018519 "Estrogen-dependent gene expression" ID=BGER005221-PA|Name=BGER005221-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" ID=BGER008623-PA|Name=BGER008623-PA 6 MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-6733;MetaCyc: PWY-7782;MetaCyc: PWY-5884;Reactome: R-HSA-9640463 "Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis" ID=BGER001432-PA|Name=BGER001432-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" ID=BGER023278-PA|Name=BGER023278-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" ID=BGER003910-PA|Name=BGER003910-PA 1 Reactome: R-HSA-2559584 "Formation of Senescence-Associated Heterochromatin Foci (SAHF)" ID=BGER004949-PA|Name=BGER004949-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" ID=BGER016325-PA|Name=BGER016325-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" ID=BGER021417-PA|Name=BGER021417-PA 4 KEGG: 00450+2.9.1.2;KEGG: 00970+2.9.1.2;MetaCyc: PWY-6281;Reactome: R-HSA-2408557 "Selenocompound metabolism";"Aminoacyl-tRNA biosynthesis";"L-selenocysteine biosynthesis II (archaea and eukaryotes)";"Selenocysteine synthesis" ID=BGER028869-PA|Name=BGER028869-PA 1 Reactome: R-HSA-3295583 "TRP channels" ID=BGER018650-PA|Name=BGER018650-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" ID=BGER017925-PA|Name=BGER017925-PA 3 Reactome: R-HSA-1236974;Reactome: R-HSA-1799339;Reactome: R-HSA-9609523 "ER-Phagosome pathway";"SRP-dependent cotranslational protein targeting to membrane";"Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" ID=BGER020333-PA|Name=BGER020333-PA 3 Reactome: R-HSA-75955;Reactome: R-HSA-674695;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events";"Formation of RNA Pol II elongation complex" ID=BGER022464-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER012193-PA|Name=BGER012193-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" ID=BGER004834-PA|Name=BGER004834-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" ID=BGER016421-PA|Name=BGER016421-PA 3 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" ID=BGER026611-PA|Name=BGER026611-PA 2 MetaCyc: PWY-5697;KEGG: 00230+3.5.3.4 "Allantoin degradation to ureidoglycolate I (urea producing)";"Purine metabolism" ID=BGER028854-PA|Name=BGER028854-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-68949;Reactome: R-HSA-68867;Reactome: R-HSA-176974;Reactome: R-HSA-176187;Reactome: R-HSA-68962 "Switching of origins to a post-replicative state";"Orc1 removal from chromatin";"Assembly of the pre-replicative complex";"Unwinding of DNA";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex" ID=BGER018422-PA|Name=BGER018422-PA 1 Reactome: R-HSA-419771 "Opsins" ID=BGER019486-PA|Name=EcKinase 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" ID=BGER010446-PA|Name=BGER010446-PA 1 Reactome: R-HSA-4085001 "Sialic acid metabolism" ID=BGER000719-PA|Name=BGER000719-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" ID=BGER011152-PA|Name=BGER011152-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" ID=BGER021718-PA|Name=BGER021718-PA 6 Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" ID=BGER025457-PA|Name=BGER025457-PA 3 MetaCyc: PWY-7803;MetaCyc: PWY-6689;Reactome: R-HSA-6784531 "Trna splicing II";"Trna splicing I";"tRNA processing in the nucleus" ID=BGER003269-PA|Name=BGER003269-PA 5 Reactome: R-HSA-5579026;Reactome: R-HSA-196108;Reactome: R-HSA-2395516;Reactome: R-HSA-1362409;Reactome: R-HSA-211976 "Defective CYP11A1 causes Adrenal insufficiency, congenital, with 46,XY sex reversal (AICSR)";"Pregnenolone biosynthesis";"Electron transport from NADPH to Ferredoxin";"Mitochondrial iron-sulfur cluster biogenesis";"Endogenous sterols" ID=BGER024665-PA|Name=BGER024665-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway"