The following files were retrieved from NCBI https://www.ncbi.nlm.nih.gov/assembly/GCF_014529535.1/ Information about this dataset can be found here: https://i5k.nal.usda.gov/bio_data/1193318 Information about the dataset's publication can be found here: https://doi.org/10.1101/2020.02.24.963009 Information about the functional annotation pipeline can be found here: https://www.mdpi.com/2075-4450/12/8/748 Instruction for running the functional annotation pipeline can be found here: https://agbase-docs.readthedocs.io/en/latest/agbase/workflow.html The file GCF_014529535.1_BU_Bcop_v1_protein.faa was post-processed with agbase/goanna:2.2 (https://hub.docker.com/repository/docker/agbase/goanna/tags?page=1) docker container to generate GO functional annotation. The resulting files are: GOanna.goanna.exponly.invertb.percentident70_qcov70.out.asn GOanna.goanna.exponly.invertb.percentident70_qcov70.out_goanna_gaf.tsv GOanna.goanna.exponly.invertb.percentident70_qcov70.out.html GOanna.goanna.exponly.invertb.percentident70_qcov70.out.tsv The file GCF_014529535.1_BU_Bcop_v1_protein.faa was post-processed with agbase/interproscan:5.41-78_0_1 (https://hub.docker.com/repository/docker/agbase/interproscan/tags?page=1) docker container to generate GO and pathway functional annotation. The resulting files are: GCF_014529535_acc_go_counts.txt GCF_014529535_acc_interpro_counts.txt GCF_014529535_acc_pathway_counts.txt GCF_014529535.err GCF_014529535_gaf.txt GCF_014529535.gff3 GCF_014529535_go_counts.txt GCF_014529535.html.tar.gz GCF_014529535_interpro_counts.txt GCF_014529535.json GCF_014529535_pathway_counts.txt GCF_014529535.svg.tar.gz GCF_014529535.tsv GCF_014529535.xml The file GCF_014529535.1_BU_Bcop_v1_protein.faa was post-processed with agbase/kobas:3.0.3_0 (https://hub.docker.com/repository/docker/agbase/kobas/tags?page=1) docker container to generate pathway functional annotation. The resulting files are: def-annotate def-annotate_KOBAS_pathways_acc.tsv def-annotate_acc_KOBAS_pathways.tsv