File descriptions. Primary file: - Bradysia_coprophila.Bcop_v1.0_gene_set.gff - Contains automated annotations from Maker2. Described in detail in https://doi.org/10.1101/2020.02.24.963009 - Data record DOI: 10.15482/USDA.ADC/1522618 - This is the main file in this tarchive. - Bradysia_coprophila.Bcop_v1.0_gene_set-converted.gff - This file is Bradysia_coprophila.Bcop_v1.0_gene_set.gff converted to RefSeq reference sequence identifiers in column 1. Supplementary files: - Bradysia_coprophila.Bcop_v1.0_evidence.rnd3.gff - Contains aligned evidence Maker2 used. - Bradysia_coprophila.Bcop_v1.0_evidence.rnd3-converted.gff - This file is Bradysia_coprophila.Bcop_v1.0_evidence.rnd3.gff converted to RefSeq reference sequence identifiers in column 1. - Bradysia_coprophila.Bcop_v1.0_masked_genome.rnd3.gff - Contains coordinates for masked regions of the genome as seen by Maker2. - Bradysia_coprophila.Bcop_v1.0_masked_genome.rnd3-converted.gff - This file is Bradysia_coprophila.Bcop_v1.0_masked_genome.rnd3.gff converted to RefSeq reference sequence identifiers in column 1. - Bradysia_coprophila.Bcop_v1.0_proteins_with_putative_function.fasta - Contains predicted protein sequences - Bradysia_coprophila.Bcop_v1.0_transcripts_with_putative_function.fasta - Contains predicted transcript sequences