The following files were retrieved from i5k Workspace@NAL
https://i5k.nal.usda.gov/data/Arthropoda/cataqu-%28Catajapyx_aquilonaris%29/BCM-After-Atlas/2.Official%20or%20Primary%20Gene%20Set/BCM_version_0.5.3/consensus_gene_set/CAQU.faa.gz

Information about this dataset can be found here: https://i5k.nal.usda.gov/bio_data/836503

Information about the functional annotation pipeline can be found here: https://www.mdpi.com/2075-4450/12/8/748
Instruction for running the functional annotation pipeline can be found here: https://agbase-docs.readthedocs.io/en/latest/agbase/workflow.html

The file .gz was post-processed with agbase/goanna:2.3 (https://hub.docker.com/repository/docker/agbase/goanna) docker container to generate GO functional annotation.
GOanna was run with these options: -a,invertebrates; -f,3; -g,70; -k,9; -q,70; -r,1.2.
The resulting files are:

GCA_000934665.2.asn
GCA_000934665.2.gaf.tsv
GCA_000934665.2.html
GCA_000934665.2.tsv

The file .gz was post-processed with agbase/interproscan:5.63-95_1 (https://hub.docker.com/repository/docker/agbase/interproscan) docker container to generate GO and pathway functional annotation. The resulting files are:

GCA_000934665_acc_go_counts.txt
GCA_000934665_acc_interpro_counts.txt
GCA_000934665.err
GCA_000934665_gaf.txt
GCA_000934665.gff3
GCA_000934665_go_counts.txt
GCA_000934665_interpro_counts.txt
GCA_000934665.tsv


The file .gz was post-processed with agbase/kobas:3.0.3_3 (https://hub.docker.com/repository/docker/agbase/kobas) docker container to generate pathway functional annotation. The resulting files are:

GCA_000934665.2_KOBAS_acc_pathways.tsv
GCA_000934665.2_KOBAS_pathways_acc.tsv
GCA_000934665.2_KOBAS.txt


The GAF output files from InterProScan and GOanna were combined into a single GAF file using agbase/combine_gafs:1.1 (https://hub.docker.com/repository/docker/agbase/combine_gafs)

GCA_000934665.2_complete.gaf.tsv