Accession_ID Pathway_Count Pathway_IDs Pathway_Names CFLO019066-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO009910-PA 2 Reactome: R-HSA-8876725;Reactome: R-HSA-611105 "Protein methylation";"Respiratory electron transport" CFLO014787-PA 2 KEGG: 00500+3.2.1.28;Reactome: R-HSA-189085 "Starch and sucrose metabolism";"Digestion of dietary carbohydrate" CFLO011907-PA 2 Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" CFLO002293-PA 10 KEGG: 00330+2.7.2.11;MetaCyc: PWY-6922;KEGG: 00330+1.2.1.41+2.7.2.11;KEGG: 00330+2.7.2.11+1.2.1.41;KEGG: 00332+1.2.1.41;Reactome: R-HSA-8964539;KEGG: 00332+2.7.2.11+1.2.1.41;KEGG: 00332+2.7.2.11;KEGG: 00332+1.2.1.41+2.7.2.11;KEGG: 00330+1.2.1.41 "Arginine and proline metabolism";"L-Ndelta-acetylornithine biosynthesis";"Arginine and proline metabolism";"Arginine and proline metabolism";"Carbapenem biosynthesis";"Glutamate and glutamine metabolism";"Carbapenem biosynthesis";"Carbapenem biosynthesis";"Carbapenem biosynthesis";"Arginine and proline metabolism" CFLO002128-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" CFLO004203-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO015097-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO013231-PA 2 Reactome: R-HSA-1663150;Reactome: R-HSA-1660662 "The activation of arylsulfatases";"Glycosphingolipid metabolism" CFLO007346-PA 7 Reactome: R-HSA-69656;Reactome: R-HSA-69202;Reactome: R-HSA-1362277;Reactome: R-HSA-69205;Reactome: R-HSA-1538133;Reactome: R-HSA-156711;Reactome: R-HSA-1362300 "Cyclin A:Cdk2-associated events at S phase entry";"Cyclin E associated events during G1/S transition";"Transcription of E2F targets under negative control by DREAM complex";"G1/S-Specific Transcription";"G0 and Early G1";"Polo-like kinase mediated events";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1" CFLO010543-PA 5 Reactome: R-HSA-8876198;Reactome: R-HSA-1660499;Reactome: R-HSA-8873719;Reactome: R-HSA-6798695;Reactome: R-HSA-1445148 "RAB GEFs exchange GTP for GDP on RABs";"Synthesis of PIPs at the plasma membrane";"RAB geranylgeranylation";"Neutrophil degranulation";"Translocation of SLC2A4 (GLUT4) to the plasma membrane" CFLO002639-PA 2 Reactome: R-HSA-446199;Reactome: R-HSA-4755609 "Synthesis of Dolichyl-phosphate";"Defective DHDDS causes retinitis pigmentosa 59" CFLO015226-PA 3 Reactome: R-HSA-112382;Reactome: R-HSA-75955;Reactome: R-HSA-674695 "Formation of RNA Pol II elongation complex";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events" CFLO002651-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" CFLO014549-PA 2 Reactome: R-HSA-174403;Reactome: R-HSA-5578998 "Glutathione synthesis and recycling";"Defective OPLAH causes 5-oxoprolinase deficiency (OPLAHD)" CFLO011080-PA 2 Reactome: R-HSA-5362517;Reactome: R-HSA-204174 "Signaling by Retinoic Acid";"Regulation of pyruvate dehydrogenase (PDH) complex" CFLO008115-PA 4 Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-381771;Reactome: R-HSA-400511 "Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)";"Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)" CFLO018760-PA 3 Reactome: R-HSA-6804760;Reactome: R-HSA-3214841;Reactome: R-HSA-2299718 "Regulation of TP53 Activity through Methylation";"PKMTs methylate histone lysines";"Condensation of Prophase Chromosomes" CFLO006890-PA 9 MetaCyc: PWY-7385;MetaCyc: PWY-7902;MetaCyc: PWY-7411;MetaCyc: PWY-5981;MetaCyc: PWY-5667;MetaCyc: PWY-6118;KEGG: 00564+1.1.1.94;Reactome: R-HSA-1483166;KEGG: 00564+1.1.1.8 "1,3-propanediol biosynthesis (engineered)";"Glucosylglycerol biosynthesis";"Phosphatidate biosynthesis (yeast)";"CDP-diacylglycerol biosynthesis III";"CDP-diacylglycerol biosynthesis I";"Glycerol-3-phosphate shuttle";"Glycerophospholipid metabolism";"Synthesis of PA";"Glycerophospholipid metabolism" CFLO006720-PA 8 KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;Reactome: R-HSA-6791226;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1 "PI3K-Akt signaling pathway";"Human papillomavirus infection";"Major pathway of rRNA processing in the nucleolus and cytosol";"Human cytomegalovirus infection";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection" CFLO019287-PA 16 Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557 "L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis" CFLO001101-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO017130-PA 2 KEGG: 00770+6.3.2.5;Reactome: R-HSA-196783 "Pantothenate and CoA biosynthesis";"Coenzyme A biosynthesis" CFLO008863-PA 2 MetaCyc: PWY-6502;Reactome: R-HSA-2393930 "8-oxo-(d)GTP detoxification I";"Phosphate bond hydrolysis by NUDT proteins" CFLO000414-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO012333-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO018385-PA 1 Reactome: R-HSA-8953750 "Transcriptional Regulation by E2F6" CFLO005665-PA 1 Reactome: R-HSA-1614517 "Sulfide oxidation to sulfate" CFLO003654-PA 1 Reactome: R-HSA-1237044 "Erythrocytes take up carbon dioxide and release oxygen" CFLO000317-PA 7 Reactome: R-HSA-380284;Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380270;Reactome: R-HSA-380259 "Loss of proteins required for interphase microtubule organization from the centrosome";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes" CFLO000759-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO016519-PA 31 MetaCyc: PWY-7723;MetaCyc: PWY-6519;MetaCyc: PWY-5994;MetaCyc: PWY-6799;MetaCyc: PWY-4381;MetaCyc: PWY-8047;Reactome: R-HSA-163765;MetaCyc: PWY-5367;MetaCyc: PWY-5366;Reactome: R-HSA-2426168;KEGG: 00061+1.1.1.100+2.3.1.85+4.2.1.59+2.3.1.39+2.3.1.41+3.1.2.14;KEGG: 00780+1.1.1.100+4.2.1.59+2.3.1.41;MetaCyc: PWY-5989;MetaCyc: PWY-5973;Reactome: R-HSA-75105;MetaCyc: PWY-8012;MetaCyc: PWY-7388;MetaCyc: PWY-7746;Reactome: R-HSA-199220;MetaCyc: PWY-8049;MetaCyc: PWY-7664;MetaCyc: PWY-5147;MetaCyc: PWY-6113;MetaCyc: PWY-5966-1;MetaCyc: PWY-5142;Reactome: R-HSA-9029558;MetaCyc: PWY-7858;MetaCyc: PWY-6282;MetaCyc: PWY-7663;MetaCyc: PWYG-321;MetaCyc: PWY-5971 "Bacterial bioluminescence";"8-amino-7-oxononanoate biosynthesis I";"Palmitate biosynthesis (animals and fungi, cytoplasm)";"Fatty acid biosynthesis initiation (plant mitochondria)";"Fatty acid biosynthesis initiation (bacteria and plants)";"Bryostatin biosynthesis";"ChREBP activates metabolic gene expression";"Petroselinate biosynthesis";"Palmitoleate biosynthesis II (plants and bacteria)";"Activation of gene expression by SREBF (SREBP)";"Fatty acid biosynthesis";"Biotin metabolism";"Stearate biosynthesis II (bacteria and plants)";"Cis-vaccenate biosynthesis";"Fatty acyl-CoA biosynthesis";"Mupirocin biosynthesis";"Octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)";"Mycobacterial sulfolipid biosynthesis";"Vitamin B5 (pantothenate) metabolism";"Pederin biosynthesis";"Oleate biosynthesis IV (anaerobic)";"Oleate biosynthesis I (plants)";"Superpathway of mycolate biosynthesis";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"Acyl-[acyl-carrier protein] thioesterase pathway";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"(5Z)-dodecenoate biosynthesis II";"Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)";"Gondoate biosynthesis (anaerobic)";"";"Palmitate biosynthesis II (bacteria and plant cytoplasm)" CFLO005736-PA 2 Reactome: R-HSA-5673001;Reactome: R-HSA-8853659 "RAF/MAP kinase cascade";"RET signaling" CFLO001338-PA 6 Reactome: R-HSA-68867;Reactome: R-HSA-68949;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-69052;Reactome: R-HSA-176974 "Assembly of the pre-replicative complex";"Orc1 removal from chromatin";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Switching of origins to a post-replicative state";"Unwinding of DNA" CFLO003311-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226 "Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO009346-PA 6 Reactome: R-HSA-983712;Reactome: R-HSA-1222556;Reactome: R-HSA-6798695;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-77387 "Ion channel transport";"ROS and RNS production in phagocytes";"Neutrophil degranulation";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Insulin receptor recycling" CFLO006891-PA 2 KEGG: 00480+1.11.1.15;Reactome: R-HSA-3299685 "Glutathione metabolism";"Detoxification of Reactive Oxygen Species" CFLO004711-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO012666-PA 4 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-3928662;Reactome: R-HSA-8856828 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"EPHB-mediated forward signaling";"Clathrin-mediated endocytosis" CFLO010596-PA 4 MetaCyc: PWY-7822;MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902 "Chitin degradation III (Serratia)";"Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)" CFLO008725-PA 7 Reactome: R-HSA-446193;Reactome: R-HSA-5633231;MetaCyc: PWY-6385;MetaCyc: PWY-5265;MetaCyc: PWY-6471;MetaCyc: PWY-6470;KEGG: 00550+2.4.1.227 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)";"Peptidoglycan biosynthesis III (mycobacteria)";"Peptidoglycan biosynthesis II (staphylococci)";"Peptidoglycan biosynthesis IV (Enterococcus faecium)";"Peptidoglycan biosynthesis V (beta-lactam resistance)";"Peptidoglycan biosynthesis" CFLO005886-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO002997-PA 2 Reactome: R-HSA-5610787;Reactome: R-HSA-5620924 "Hedgehog 'off' state";"Intraflagellar transport" CFLO016389-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO002623-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476;Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-73980 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination" CFLO002007-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO018740-PA 5 Reactome: R-HSA-162588;Reactome: R-HSA-9610379;Reactome: R-HSA-174490;Reactome: R-HSA-9615710;Reactome: R-HSA-917729 "Budding and maturation of HIV virion";"HCMV Late Events";"Membrane binding and targetting of GAG proteins";"Late endosomal microautophagy";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO000873-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" CFLO006590-PA 4 MetaCyc: PWY-6834;KEGG: 00330+4.1.1.50;Reactome: R-HSA-351202;KEGG: 00270+4.1.1.50 "Spermidine biosynthesis III";"Arginine and proline metabolism";"Metabolism of polyamines";"Cysteine and methionine metabolism" CFLO009449-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO007698-PA 3 MetaCyc: PWY-7533;Reactome: R-HSA-2142691;Reactome: R-HSA-5423646 "Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Aflatoxin activation and detoxification" CFLO002797-PA 3 MetaCyc: PWY-7803;Reactome: R-HSA-6784531;MetaCyc: PWY-6689 "Trna splicing II";"tRNA processing in the nucleus";"Trna splicing I" CFLO001068-PA 5 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856;Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO004627-PA 3 MetaCyc: PWY-6857;Reactome: R-HSA-192456;KEGG: 00561+3.1.1.3 "Retinol biosynthesis";"Digestion of dietary lipid";"Glycerolipid metabolism" CFLO002140-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO012610-PA 10 Reactome: R-HSA-3108214;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-69473;Reactome: R-HSA-6804756;Reactome: R-HSA-5693607;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5693579;Reactome: R-HSA-5685938 "SUMOylation of DNA damage response and repair proteins";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"Homologous DNA Pairing and Strand Exchange";"HDR through Single Strand Annealing (SSA)" CFLO005857-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO002667-PA 8 KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-437239;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05170+2.7.11.1 "Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human cytomegalovirus infection";"Recycling pathway of L1";"Thermogenesis";"mTOR signaling pathway";"Relaxin signaling pathway";"Human immunodeficiency virus 1 infection" CFLO019568-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1 "Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway" CFLO013101-PA 2 KEGG: 00500+2.4.1.15;Reactome: R-HSA-446205 "Starch and sucrose metabolism";"Synthesis of GDP-mannose" CFLO008194-PA 1 KEGG: 04660+2.7.10.2 "T cell receptor signaling pathway" CFLO011690-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" CFLO017262-PA 2 Reactome: R-HSA-3322077;Reactome: R-HSA-3878781 "Glycogen synthesis";"Glycogen storage disease type IV (GBE1)" CFLO004855-PA 4 Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;MetaCyc: PWY-7375 "RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Mrna capping I" CFLO007143-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO001327-PA 22 Reactome: R-HSA-68877;Reactome: R-HSA-5467340;Reactome: R-HSA-195253;Reactome: R-HSA-4641262;Reactome: R-HSA-5467337;Reactome: R-HSA-5467348;Reactome: R-HSA-5358752;Reactome: R-HSA-5358749;Reactome: R-HSA-5358751;Reactome: R-HSA-389513;Reactome: R-HSA-5663220;Reactome: R-HSA-196299;Reactome: R-HSA-5358747;Reactome: R-HSA-432142;Reactome: R-HSA-5339716;Reactome: R-HSA-6811558;Reactome: R-HSA-9648025;Reactome: R-HSA-5673000;Reactome: R-HSA-5675221;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257 "Mitotic Prometaphase";"AXIN missense mutants destabilize the destruction complex";"Degradation of beta-catenin by the destruction complex";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"APC truncation mutants have impaired AXIN binding";"Truncations of AMER1 destabilize the destruction complex";"T41 mutants of beta-catenin aren't phosphorylated";"S37 mutants of beta-catenin aren't phosphorylated";"S45 mutants of beta-catenin aren't phosphorylated";"CTLA4 inhibitory signaling";"RHO GTPases Activate Formins";"Beta-catenin phosphorylation cascade";"S33 mutants of beta-catenin aren't phosphorylated";"Platelet sensitization by LDL";"Misspliced GSK3beta mutants stabilize beta-catenin";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"EML4 and NUDC in mitotic spindle formation";"RAF activation";"Negative regulation of MAPK pathway";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion" CFLO019683-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" CFLO009989-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" CFLO000222-PA 10 KEGG: 00051+2.7.1.11;MetaCyc: PWY-1861;Reactome: R-HSA-70171;MetaCyc: PWY-1042;KEGG: 00030+2.7.1.11;KEGG: 00052+2.7.1.11;MetaCyc: PWY-5484;MetaCyc: PWY-7385;KEGG: 00010+2.7.1.11;KEGG: 00680+2.7.1.11 "Fructose and mannose metabolism";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Glycolysis";"Glycolysis IV (plant cytosol)";"Pentose phosphate pathway";"Galactose metabolism";"Glycolysis II (from fructose 6-phosphate)";"1,3-propanediol biosynthesis (engineered)";"Glycolysis / Gluconeogenesis";"Methane metabolism" CFLO001616-PA 6 Reactome: R-HSA-68949;Reactome: R-HSA-68867;Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Orc1 removal from chromatin";"Assembly of the pre-replicative complex";"Switching of origins to a post-replicative state";"Unwinding of DNA";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" CFLO001235-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO007745-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" CFLO002879-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO014229-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO009900-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" CFLO019032-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO000613-PA 3 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" CFLO006553-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO017484-PA 2 KEGG: 00970+6.1.1.5;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" CFLO012506-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO007362-PA 25 Reactome: R-HSA-8936459;Reactome: R-HSA-8934593;Reactome: R-HSA-8951936;Reactome: R-HSA-8941332;Reactome: R-HSA-8951911;Reactome: R-HSA-8941333;Reactome: R-HSA-8939902;Reactome: R-HSA-8931987;Reactome: R-HSA-8939245;Reactome: R-HSA-8949275;Reactome: R-HSA-8941284;Reactome: R-HSA-8939247;Reactome: R-HSA-8940973;Reactome: R-HSA-8877330;Reactome: R-HSA-8939243;Reactome: R-HSA-8939246;Reactome: R-HSA-8939256;Reactome: R-HSA-9616222;Reactome: R-HSA-8941858;Reactome: R-HSA-8941326;Reactome: R-HSA-8878166;Reactome: R-HSA-8935964;Reactome: R-HSA-8939242;Reactome: R-HSA-9018519;Reactome: R-HSA-8939236 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Regulation of RUNX1 Expression and Activity";"RUNX3 regulates p14-ARF";"RUNX2 regulates genes involved in cell migration";"RUNX3 regulates RUNX1-mediated transcription";"RUNX2 regulates genes involved in differentiation of myeloid cells";"Regulation of RUNX2 expression and activity";"RUNX1 regulates estrogen receptor mediated transcription";"RUNX1 regulates transcription of genes involved in BCR signaling";"RUNX3 Regulates Immune Response and Cell Migration";"RUNX2 regulates chondrocyte maturation";"RUNX1 regulates transcription of genes involved in interleukin signaling";"RUNX2 regulates osteoblast differentiation";"RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RUNX1 regulates transcription of genes involved in differentiation of myeloid cells";"RUNX1 regulates transcription of genes involved in WNT signaling";"Transcriptional regulation of granulopoiesis";"Regulation of RUNX3 expression and activity";"RUNX2 regulates bone development";"Transcriptional regulation by RUNX2";"RUNX1 regulates expression of components of tight junctions";"RUNX1 regulates transcription of genes involved in differentiation of keratinocytes";"Estrogen-dependent gene expression";"RUNX1 regulates transcription of genes involved in differentiation of HSCs" CFLO019332-PA 5 Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-77387;Reactome: R-HSA-983712;Reactome: R-HSA-1222556 "Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Insulin receptor recycling";"Ion channel transport";"ROS and RNS production in phagocytes" CFLO012225-PA 2 Reactome: R-HSA-8849175;KEGG: 00260+2.3.1.29 "Threonine catabolism";"Glycine, serine and threonine metabolism" CFLO011261-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO015650-PA 6 Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-72695;Reactome: R-HSA-156827 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO014862-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO008294-PA 6 Reactome: R-HSA-163560;Reactome: R-HSA-1483166;KEGG: 00564+1.1.5.3;MetaCyc: PWY-4261;MetaCyc: PWY-6952;MetaCyc: PWY-6118 "Triglyceride catabolism";"Synthesis of PA";"Glycerophospholipid metabolism";"Glycerol degradation I";"Glycerophosphodiester degradation";"Glycerol-3-phosphate shuttle" CFLO008930-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO006502-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO001934-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO005535-PA 3 KEGG: 00030+2.7.6.1;Reactome: R-HSA-73843;KEGG: 00230+2.7.6.1 "Pentose phosphate pathway";"5-Phosphoribose 1-diphosphate biosynthesis";"Purine metabolism" CFLO018047-PA 19 KEGG: 00620+1.1.1.37;MetaCyc: PWY-5392;Reactome: R-HSA-71403;KEGG: 00020+1.1.1.37;MetaCyc: PWY-1622;MetaCyc: PWY-561;KEGG: 00270+1.1.1.37;MetaCyc: PWY-7115;KEGG: 00680+1.1.1.37;Reactome: R-HSA-70263;MetaCyc: PWY-6728;MetaCyc: PWY-5690;MetaCyc: PWY-8086;KEGG: 00720+1.1.1.37;MetaCyc: PWY-7383;MetaCyc: PWY-5913;KEGG: 00630+1.1.1.37;MetaCyc: PWY-6969;KEGG: 00710+1.1.1.37 "Pyruvate metabolism";"Reductive TCA cycle II";"Citric acid cycle (TCA cycle)";"Citrate cycle (TCA cycle)";"Formaldehyde assimilation I (serine pathway)";"Superpathway of glyoxylate cycle and fatty acid degradation";"Cysteine and methionine metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Methane metabolism";"Gluconeogenesis";"Methylaspartate cycle";"TCA cycle II (plants and fungi)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Carbon fixation pathways in prokaryotes";"Anaerobic energy metabolism (invertebrates, cytosol)";"Partial TCA cycle (obligate autotrophs)";"Glyoxylate and dicarboxylate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Carbon fixation in photosynthetic organisms" CFLO008252-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO007785-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO016564-PA 3 MetaCyc: PWY-7159;KEGG: 00860+1.3.3.3;Reactome: R-HSA-189451 "3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)";"Porphyrin and chlorophyll metabolism";"Heme biosynthesis" CFLO018020-PA 6 Reactome: R-HSA-1650814;Reactome: R-HSA-8874081;Reactome: R-HSA-3000171;Reactome: R-HSA-2022090;Reactome: R-HSA-8948216;Reactome: R-HSA-1442490 "Collagen biosynthesis and modifying enzymes";"MET activates PTK2 signaling";"Non-integrin membrane-ECM interactions";"Assembly of collagen fibrils and other multimeric structures";"Collagen chain trimerization";"Collagen degradation" CFLO003260-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO009221-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO003180-PA 2 Reactome: R-HSA-9603798;Reactome: R-HSA-1369062 "Class I peroxisomal membrane protein import";"ABC transporters in lipid homeostasis" CFLO018761-PA 3 Reactome: R-HSA-2299718;Reactome: R-HSA-6804760;Reactome: R-HSA-3214841 "Condensation of Prophase Chromosomes";"Regulation of TP53 Activity through Methylation";"PKMTs methylate histone lysines" CFLO012313-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO000596-PA 11 Reactome: R-HSA-446205;MetaCyc: PWY-3861;MetaCyc: PWY-6992;MetaCyc: PWY-5659;MetaCyc: PWY-7456;MetaCyc: PWY-7586;KEGG: 00051+5.3.1.8;KEGG: 00520+5.3.1.8;MetaCyc: PWY-882;Reactome: R-HSA-4043916;MetaCyc: PWY-3881 "Synthesis of GDP-mannose";"Mannitol degradation II";"1,5-anhydrofructose degradation";"GDP-mannose biosynthesis";"Beta-(1,4)-mannan degradation";"Beta-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation";"Fructose and mannose metabolism";"Amino sugar and nucleotide sugar metabolism";"L-ascorbate biosynthesis I (L-galactose pathway)";"Defective MPI causes MPI-CDG (CDG-1b)";"Mannitol biosynthesis" CFLO002570-PA 2 KEGG: 00970+6.1.1.20;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" CFLO010491-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-111367;Reactome: R-HSA-77588 "RNA Polymerase II Transcription Termination";"SLBP independent Processing of Histone Pre-mRNAs";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs" CFLO014339-PA 5 Reactome: R-HSA-389960;Reactome: R-HSA-390450;Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-6814122 "Formation of tubulin folding intermediates by CCT/TriC";"Folding of actin by CCT/TriC";"Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding" CFLO001758-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO009837-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO018699-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO004788-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO009619-PA 3 Reactome: R-HSA-9645722;Reactome: R-HSA-111471;Reactome: R-HSA-140837 "Defective Intrinsic Pathway for Apoptosis Due to p14ARF Loss of Function";"Apoptotic factor-mediated response";"Intrinsic Pathway of Fibrin Clot Formation" CFLO013472-PA 14 MetaCyc: PWY-7279;Reactome: R-HSA-71403;KEGG: 00650+1.3.5.1;MetaCyc: PWY-6728;KEGG: 00720+1.3.5.1;Reactome: R-HSA-611105;MetaCyc: PWY-3781;MetaCyc: PWY-5690;MetaCyc: PWY-561;MetaCyc: PWY-7254;MetaCyc: PWY-6969;KEGG: 00020+1.3.5.1;KEGG: 00190+1.3.5.1;MetaCyc: PWY-4302 "Aerobic respiration II (cytochrome c) (yeast)";"Citric acid cycle (TCA cycle)";"Butanoate metabolism";"Methylaspartate cycle";"Carbon fixation pathways in prokaryotes";"Respiratory electron transport";"Aerobic respiration I (cytochrome c)";"TCA cycle II (plants and fungi)";"Superpathway of glyoxylate cycle and fatty acid degradation";"TCA cycle VII (acetate-producers)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Citrate cycle (TCA cycle)";"Oxidative phosphorylation";"Aerobic respiration III (alternative oxidase pathway)" CFLO005972-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO006575-PA 3 Reactome: R-HSA-418359;Reactome: R-HSA-425561;Reactome: R-HSA-5578775 "Reduction of cytosolic Ca++ levels";"Sodium/Calcium exchangers";"Ion homeostasis" CFLO004920-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO000992-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO003344-PA 2 Reactome: R-HSA-2514859;KEGG: 00900+2.5.1.58 "Inactivation, recovery and regulation of the phototransduction cascade";"Terpenoid backbone biosynthesis" CFLO012223-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO016288-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" CFLO019116-PA 11 Reactome: R-HSA-432040;Reactome: R-HSA-164378;KEGG: 00230+4.6.1.1;Reactome: R-HSA-418555;Reactome: R-HSA-163615;Reactome: R-HSA-170670;Reactome: R-HSA-163359;Reactome: R-HSA-418597;Reactome: R-HSA-5610787;Reactome: R-HSA-170660;Reactome: R-HSA-418594 "Vasopressin regulates renal water homeostasis via Aquaporins";"PKA activation in glucagon signalling";"Purine metabolism";"G alpha (s) signalling events";"PKA activation";"Adenylate cyclase inhibitory pathway";"Glucagon signaling in metabolic regulation";"G alpha (z) signalling events";"Hedgehog 'off' state";"Adenylate cyclase activating pathway";"G alpha (i) signalling events" CFLO003146-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO003452-PA 56 Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236 "Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs" CFLO010242-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO008169-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO015877-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO009696-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" CFLO003156-PA 1 Reactome: R-HSA-6787450 "tRNA modification in the mitochondrion" CFLO011225-PA 11 MetaCyc: PWY-6606;KEGG: 00240+3.1.3.5;MetaCyc: PWY-6607;KEGG: 00760+3.1.3.5;MetaCyc: PWY-5381;KEGG: 00230+3.1.3.5;MetaCyc: PWY-6596;MetaCyc: PWY-7185;MetaCyc: PWY-7821;MetaCyc: PWY-6608;MetaCyc: PWY-5695 "Guanosine nucleotides degradation II";"Pyrimidine metabolism";"Guanosine nucleotides degradation I";"Nicotinate and nicotinamide metabolism";"Pyridine nucleotide cycling (plants)";"Purine metabolism";"Adenosine nucleotides degradation I";"UTP and CTP dephosphorylation I";"Tunicamycin biosynthesis";"Guanosine nucleotides degradation III";"Inosine 5'-phosphate degradation" CFLO012546-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO009918-PA 6 Reactome: R-HSA-1655829;Reactome: R-HSA-381033;Reactome: R-HSA-8963889;Reactome: R-HSA-8874211;Reactome: R-HSA-381426;Reactome: R-HSA-8957275 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"ATF6 (ATF6-alpha) activates chaperones";"Assembly of active LPL and LIPC lipase complexes";"CREB3 factors activate genes";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Post-translational protein phosphorylation" CFLO001339-PA 2 Reactome: R-HSA-2514853;Reactome: R-HSA-2299718 "Condensation of Prometaphase Chromosomes";"Condensation of Prophase Chromosomes" CFLO016834-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-416476 "Peptide ligand-binding receptors";"G alpha (q) signalling events" CFLO006978-PA 14 KEGG: 00280+2.6.1.42;MetaCyc: PWY-5103;MetaCyc: PWY-5104;MetaCyc: PWY-5076;KEGG: 00270+2.6.1.42;KEGG: 00770+2.6.1.42;MetaCyc: PWY-5108;MetaCyc: PWY-5078;MetaCyc: PWY-5101;MetaCyc: PWY-7767;Reactome: R-HSA-70895;KEGG: 00966+2.6.1.42;KEGG: 00290+2.6.1.42;MetaCyc: PWY-5057 "Valine, leucine and isoleucine degradation";"L-isoleucine biosynthesis III";"L-isoleucine biosynthesis IV";"L-leucine degradation III";"Cysteine and methionine metabolism";"Pantothenate and CoA biosynthesis";"L-isoleucine biosynthesis V";"L-isoleucine degradation II";"L-isoleucine biosynthesis II";"L-leucine degradation IV (Stickland reaction)";"Branched-chain amino acid catabolism";"Glucosinolate biosynthesis";"Valine, leucine and isoleucine biosynthesis";"L-valine degradation II" CFLO011249-PA 1 Reactome: R-HSA-2173788 "Downregulation of TGF-beta receptor signaling" CFLO015096-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO019401-PA 5 Reactome: R-HSA-983170;Reactome: R-HSA-5694530;Reactome: R-HSA-2132295;Reactome: R-HSA-204005;Reactome: R-HSA-1655829 "Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Cargo concentration in the ER";"MHC class II antigen presentation";"COPII-mediated vesicle transport";"Regulation of cholesterol biosynthesis by SREBP (SREBF)" CFLO000912-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" CFLO005593-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO007010-PA 5 Reactome: R-HSA-204005;Reactome: R-HSA-1655829;Reactome: R-HSA-983170;Reactome: R-HSA-5694530;Reactome: R-HSA-2132295 "COPII-mediated vesicle transport";"Regulation of cholesterol biosynthesis by SREBP (SREBF)";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Cargo concentration in the ER";"MHC class II antigen presentation" CFLO006180-PA 5 KEGG: 00740+2.7.1.26;Reactome: R-HSA-196843;MetaCyc: PWY-7863;MetaCyc: PWY-6168;MetaCyc: PWY-5523 "Riboflavin metabolism";"Vitamin B2 (riboflavin) metabolism";"Roseoflavin biosynthesis";"Flavin biosynthesis III (fungi)";"5,6-dimethylbenzimidazole biosynthesis I (aerobic)" CFLO017870-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO008755-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO012314-PA 9 Reactome: R-HSA-975634;Reactome: R-HSA-3560801;Reactome: R-HSA-3560783;Reactome: R-HSA-2024096;Reactome: R-HSA-3656237;Reactome: R-HSA-3656253;Reactome: R-HSA-4420332;Reactome: R-HSA-1971475;Reactome: R-HSA-2022928 "Retinoid metabolism and transport";"Defective B3GAT3 causes JDSSDHD";"Defective B4GALT7 causes EDS, progeroid type";"HS-GAG degradation";"Defective EXT2 causes exostoses 2";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"A tetrasaccharide linker sequence is required for GAG synthesis";"HS-GAG biosynthesis" CFLO019517-PA 3 Reactome: R-HSA-196783;MetaCyc: PWY-3961;KEGG: 00770+2.7.1.33 "Coenzyme A biosynthesis";"Phosphopantothenate biosynthesis II";"Pantothenate and CoA biosynthesis" CFLO008841-PA 24 Reactome: R-HSA-9646399;Reactome: R-HSA-2467813;Reactome: R-HSA-8852276;Reactome: R-HSA-2500257;Reactome: R-HSA-380320;Reactome: R-HSA-9619483;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-437239;Reactome: R-HSA-8955332;Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-1445148;Reactome: R-HSA-6811434;Reactome: R-HSA-5617833;Reactome: R-HSA-3371497;Reactome: R-HSA-190840;Reactome: R-HSA-5626467;Reactome: R-HSA-68877;Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-190861;Reactome: R-HSA-9609736 "Aggrephagy";"Separation of Sister Chromatids";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Resolution of Sister Chromatid Cohesion";"Recruitment of NuMA to mitotic centrosomes";"Activation of AMPK downstream of NMDARs";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Recycling pathway of L1";"Carboxyterminal post-translational modifications of tubulin";"COPI-mediated anterograde transport";"Kinesins";"MHC class II antigen presentation";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"COPI-dependent Golgi-to-ER retrograde traffic";"Cilium Assembly";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"RHO GTPases activate IQGAPs";"Mitotic Prometaphase";"HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"Gap junction assembly";"Assembly and cell surface presentation of NMDA receptors" CFLO006789-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO006091-PA 3 KEGG: 04070+3.1.3.78;MetaCyc: PWY-6367;MetaCyc: PWY-6368 "Phosphatidylinositol signaling system";"D-myo-inositol-5-phosphate metabolism";"3-phosphoinositide degradation" CFLO001830-PA 1 Reactome: R-HSA-8876725 "Protein methylation" CFLO006571-PA 6 Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-450604;Reactome: R-HSA-450513;Reactome: R-HSA-429958;Reactome: R-HSA-6791226 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"KSRP (KHSRP) binds and destabilizes mRNA";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO008212-PA 14 Reactome: R-HSA-1251985;Reactome: R-HSA-9013700;Reactome: R-HSA-2122948;Reactome: R-HSA-193692;Reactome: R-HSA-2894862;Reactome: R-HSA-1474228;Reactome: R-HSA-2979096;Reactome: R-HSA-9017802;Reactome: R-HSA-205043;Reactome: R-HSA-3928665;Reactome: R-HSA-6798695;Reactome: R-HSA-2644606;Reactome: R-HSA-9013507;Reactome: R-HSA-977225 "Nuclear signaling by ERBB4";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Regulated proteolysis of p75NTR";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Degradation of the extracellular matrix";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Noncanonical activation of NOTCH3";"NRIF signals cell death from the nucleus";"EPH-ephrin mediated repulsion of cells";"Neutrophil degranulation";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Amyloid fiber formation" CFLO007790-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO012622-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO014613-PA 9 Reactome: R-HSA-5685938;Reactome: R-HSA-5693579;Reactome: R-HSA-5685942;Reactome: R-HSA-5693607;Reactome: R-HSA-5693568;Reactome: R-HSA-69473;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554;Reactome: R-HSA-6804756 "HDR through Single Strand Annealing (SSA)";"Homologous DNA Pairing and Strand Exchange";"HDR through Homologous Recombination (HRR)";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Holliday Junction Intermediates";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Regulation of TP53 Activity through Phosphorylation" CFLO018537-PA 7 KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Thermogenesis";"Human papillomavirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO017625-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO003275-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" CFLO002281-PA 3 Reactome: R-HSA-73621;Reactome: R-HSA-74259;Reactome: R-HSA-196807 "Pyrimidine catabolism";"Purine catabolism";"Nicotinate metabolism" CFLO002903-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" CFLO010963-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO001802-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO010215-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO001380-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-6807505 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA polymerase II transcribes snRNA genes" CFLO009916-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-9639288 "ROS and RNS production in phagocytes";"Ion channel transport";"Insulin receptor recycling";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1" CFLO017572-PA 4 KEGG: 00270+2.5.1.16;Reactome: R-HSA-351202;KEGG: 00330+2.5.1.16;KEGG: 00480+2.5.1.16 "Cysteine and methionine metabolism";"Metabolism of polyamines";"Arginine and proline metabolism";"Glutathione metabolism" CFLO009990-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" CFLO017314-PA 2 Reactome: R-HSA-6814122;Reactome: R-HSA-418594 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G alpha (i) signalling events" CFLO008783-PA 1 Reactome: R-HSA-140342 "Apoptosis induced DNA fragmentation" CFLO012281-PA 2 KEGG: 00450+6.1.1.10;KEGG: 00970+6.1.1.10 "Selenocompound metabolism";"Aminoacyl-tRNA biosynthesis" CFLO016459-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-6811440;Reactome: R-HSA-432722;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Neutrophil degranulation";"Retrograde transport at the Trans-Golgi-Network";"Golgi Associated Vesicle Biogenesis";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" CFLO010085-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" CFLO000939-PA 56 Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-5668541;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590 "Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"TNFR2 non-canonical NF-kB pathway";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling" CFLO001542-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO002357-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO004448-PA 4 Reactome: R-HSA-5696394;Reactome: R-HSA-6781823;Reactome: R-HSA-8951664;Reactome: R-HSA-8856825 "DNA Damage Recognition in GG-NER";"Formation of TC-NER Pre-Incision Complex";"Neddylation";"Cargo recognition for clathrin-mediated endocytosis" CFLO018530-PA 57 Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-6798695;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780 "Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"Neutrophil degranulation";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome" CFLO001035-PA 1 Reactome: R-HSA-5693565 "Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" CFLO002921-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO000464-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO009395-PA 2 Reactome: R-HSA-194840;Reactome: R-HSA-8876198 "Rho GTPase cycle";"RAB GEFs exchange GTP for GDP on RABs" CFLO015189-PA 14 Reactome: R-HSA-167246;Reactome: R-HSA-167287;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-167152;Reactome: R-HSA-167242;Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167290;Reactome: R-HSA-167158 "Tat-mediated elongation of the HIV-1 transcript";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV elongation complex in the absence of HIV Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Pausing and recovery of HIV elongation";"Formation of the HIV-1 Early Elongation Complex" CFLO013282-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO003255-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO019403-PA 5 KEGG: 04070+2.7.7.41;MetaCyc: PWY-5667;MetaCyc: PWY-7817;KEGG: 00564+2.7.7.41;MetaCyc: PWY-5981 "Phosphatidylinositol signaling system";"CDP-diacylglycerol biosynthesis I";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism";"CDP-diacylglycerol biosynthesis III" CFLO001389-PA 6 MetaCyc: PWY-2942;KEGG: 00300+4.3.3.7;MetaCyc: PWY-8088;KEGG: 00261+4.3.3.7;MetaCyc: PWY-5097;MetaCyc: PWY-2941 "L-lysine biosynthesis III";"Lysine biosynthesis";"Dipicolinate biosynthesis";"Monobactam biosynthesis";"L-lysine biosynthesis VI";"L-lysine biosynthesis II" CFLO016913-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO014367-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" CFLO007188-PA 3 KEGG: 00030+1.1.1.44;Reactome: R-HSA-71336;KEGG: 00480+1.1.1.44 "Pentose phosphate pathway";"Pentose phosphate pathway";"Glutathione metabolism" CFLO004541-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO001451-PA 4 Reactome: R-HSA-9020702;MetaCyc: PWY-7511;Reactome: R-HSA-937039;Reactome: R-HSA-975144 "Interleukin-1 signaling";"Protein ubiquitination";"IRAK1 recruits IKK complex";"IRAK1 recruits IKK complex upon TLR7/8 or 9 stimulation" CFLO011060-PA 6 Reactome: R-HSA-5626467;Reactome: R-HSA-381426;Reactome: R-HSA-8957275;Reactome: R-HSA-2173796;Reactome: R-HSA-3769402;Reactome: R-HSA-201722 "RHO GTPases activate IQGAPs";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Post-translational protein phosphorylation";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription";"Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex" CFLO012219-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" CFLO000237-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" CFLO013102-PA 4 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16;Reactome: R-HSA-180024 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation";"DARPP-32 events" CFLO011096-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO017730-PA 13 Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO004710-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" CFLO003119-PA 4 Reactome: R-HSA-9613829;Reactome: R-HSA-9646399;Reactome: R-HSA-9615710;Reactome: R-HSA-3899300 "Chaperone Mediated Autophagy";"Aggrephagy";"Late endosomal microautophagy";"SUMOylation of transcription cofactors" CFLO000028-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO012781-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO005171-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO007809-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" CFLO001935-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO004514-PA 3 Reactome: R-HSA-5578775;Reactome: R-HSA-936837;Reactome: R-HSA-418359 "Ion homeostasis";"Ion transport by P-type ATPases";"Reduction of cytosolic Ca++ levels" CFLO014993-PA 9 KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-6782315;KEGG: 05165+2.7.11.1;Reactome: R-HSA-6804756;KEGG: 05170+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1 "Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"tRNA modification in the nucleus and cytosol";"Human papillomavirus infection";"Regulation of TP53 Activity through Phosphorylation";"Human immunodeficiency virus 1 infection";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis" CFLO017514-PA 4 Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-2468052;Reactome: R-HSA-2470946 "Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"Establishment of Sister Chromatid Cohesion";"Cohesin Loading onto Chromatin" CFLO003390-PA 8 Reactome: R-HSA-6798695;Reactome: R-HSA-9627069;Reactome: R-HSA-6803207;Reactome: R-HSA-111458;Reactome: R-HSA-111464;Reactome: R-HSA-111459;Reactome: R-HSA-8953750;Reactome: R-HSA-111463 "Neutrophil degranulation";"Regulation of the apoptosome activity";"TP53 Regulates Transcription of Caspase Activators and Caspases";"Formation of apoptosome";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"Activation of caspases through apoptosome-mediated cleavage";"Transcriptional Regulation by E2F6";"SMAC (DIABLO) binds to IAPs" CFLO009351-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO003791-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO011964-PA 7 KEGG: 00240+6.3.5.5;MetaCyc: PWY-7400;MetaCyc: PWY-7790;MetaCyc: PWY-5686;MetaCyc: PWY-5154;KEGG: 00250+6.3.5.5;MetaCyc: PWY-7791 "Pyrimidine metabolism";"L-arginine biosynthesis IV (archaebacteria)";"UMP biosynthesis II";"UMP biosynthesis I";"L-arginine biosynthesis III (via N-acetyl-L-citrulline)";"Alanine, aspartate and glutamate metabolism";"UMP biosynthesis III" CFLO004757-PA 8 Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-167590;Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-182218;Reactome: R-HSA-77387;Reactome: R-HSA-9636467 "Amino acids regulate mTORC1";"Ion channel transport";"Nef Mediated CD4 Down-regulation";"ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Nef Mediated CD8 Down-regulation";"Insulin receptor recycling";"Blockage of phagosome acidification" CFLO011367-PA 1 Reactome: R-HSA-3295583 "TRP channels" CFLO018718-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO005434-PA 5 Reactome: R-HSA-6811440;Reactome: R-HSA-6807878;Reactome: R-HSA-204005;Reactome: R-HSA-6811434;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport";"COPII-mediated vesicle transport";"COPI-dependent Golgi-to-ER retrograde traffic";"Intra-Golgi traffic" CFLO015876-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO016835-PA 2 Reactome: R-HSA-9634600;KEGG: 00051+2.7.1.105+3.1.3.46 "Regulation of glycolysis by fructose 2,6-bisphosphate metabolism";"Fructose and mannose metabolism" CFLO006631-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO016845-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-416476 "Peptide ligand-binding receptors";"G alpha (q) signalling events" CFLO012008-PA 2 Reactome: R-HSA-6814122;Reactome: R-HSA-418594 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G alpha (i) signalling events" CFLO004589-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO000623-PA 18 KEGG: 00960+2.6.1.1;KEGG: 00360+2.6.1.1;MetaCyc: PWY-6642;KEGG: 00270+2.6.1.1;MetaCyc: PWY-7383;KEGG: 00400+2.6.1.1;MetaCyc: PWY-5913;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;KEGG: 00401+2.6.1.1;KEGG: 00350+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00950+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00220+2.6.1.1;MetaCyc: PWY-7117;KEGG: 00330+2.6.1.1;KEGG: 00710+2.6.1.1 "Tropane, piperidine and pyridine alkaloid biosynthesis";"Phenylalanine metabolism";"(R)-cysteate degradation";"Cysteine and methionine metabolism";"Anaerobic energy metabolism (invertebrates, cytosol)";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Partial TCA cycle (obligate autotrophs)";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Novobiocin biosynthesis";"Tyrosine metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Isoquinoline alkaloid biosynthesis";"Coenzyme M biosynthesis II";"Arginine biosynthesis";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Arginine and proline metabolism";"Carbon fixation in photosynthetic organisms" CFLO015488-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO006669-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO008237-PA 5 MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;Reactome: R-HSA-189085;MetaCyc: PWY-7822 "Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Digestion of dietary carbohydrate";"Chitin degradation III (Serratia)" CFLO014204-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" CFLO007241-PA 1 Reactome: R-HSA-212436 "Generic Transcription Pathway" CFLO013256-PA 1 Reactome: R-HSA-429958 "mRNA decay by 3' to 5' exoribonuclease" CFLO003212-PA 9 Reactome: R-HSA-110331;Reactome: R-HSA-110357;Reactome: R-HSA-110329;Reactome: R-HSA-9657050;Reactome: R-HSA-110330;Reactome: R-HSA-9656255;Reactome: R-HSA-9656256;Reactome: R-HSA-5649702;Reactome: R-HSA-110328 "Cleavage of the damaged purine";"Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine";"Defective OGG1 Localization";"Recognition and association of DNA glycosylase with site containing an affected purine";"Defective OGG1 Substrate Binding";"Defective OGG1 Substrate Processing";"APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine" CFLO016210-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO005740-PA 16 Reactome: R-HSA-8853659;Reactome: R-HSA-912526;Reactome: R-HSA-416476;Reactome: R-HSA-912631;Reactome: R-HSA-1433557;Reactome: R-HSA-114604;Reactome: R-HSA-194840;Reactome: R-HSA-512988;Reactome: R-HSA-1266695;Reactome: R-HSA-2219530;Reactome: R-HSA-1257604;Reactome: R-HSA-388841;Reactome: R-HSA-389357;Reactome: R-HSA-6811558;Reactome: R-HSA-9009391;Reactome: R-HSA-1660499 "RET signaling";"Interleukin receptor SHC signaling";"G alpha (q) signalling events";"Regulation of signaling by CBL";"Signaling by SCF-KIT";"GPVI-mediated activation cascade";"Rho GTPase cycle";"Interleukin-3, Interleukin-5 and GM-CSF signaling";"Interleukin-7 signaling";"Constitutive Signaling by Aberrant PI3K in Cancer";"PIP3 activates AKT signaling";"Costimulation by the CD28 family";"CD28 dependent PI3K/Akt signaling";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Extra-nuclear estrogen signaling";"Synthesis of PIPs at the plasma membrane" CFLO003427-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO009620-PA 9 Reactome: R-HSA-112043;MetaCyc: PWY-6367;MetaCyc: PWY-6351;MetaCyc: PWY-8052;Reactome: R-HSA-1855204;MetaCyc: PWY-7039;Reactome: R-HSA-416476;KEGG: 00562+3.1.4.11;KEGG: 04070+3.1.4.11 "PLC beta mediated events";"D-myo-inositol-5-phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"2-arachidonoylglycerol biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"Phosphatidate metabolism, as a signaling molecule";"G alpha (q) signalling events";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system" CFLO008188-PA 3 KEGG: 00564+4.1.1.65;Reactome: R-HSA-1483213;MetaCyc: PWY-5669 "Glycerophospholipid metabolism";"Synthesis of PE";"Phosphatidylserine and phosphatidylethanolamine biosynthesis I" CFLO008927-PA 6 Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68949 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Switching of origins to a post-replicative state";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin" CFLO007634-PA 11 MetaCyc: PWY-6964;MetaCyc: PWY-381;KEGG: 00630+6.3.1.2;Reactome: R-HSA-210455;MetaCyc: PWY-6549;KEGG: 00220+6.3.1.2;KEGG: 00250+6.3.1.2;KEGG: 00910+6.3.1.2;MetaCyc: PWY-5675;Reactome: R-HSA-8964539;MetaCyc: PWY-6963 "Ammonia assimilation cycle II";"Nitrate reduction II (assimilatory)";"Glyoxylate and dicarboxylate metabolism";"Astrocytic Glutamate-Glutamine Uptake And Metabolism";"L-glutamine biosynthesis III";"Arginine biosynthesis";"Alanine, aspartate and glutamate metabolism";"Nitrogen metabolism";"Nitrate reduction V (assimilatory)";"Glutamate and glutamine metabolism";"Ammonia assimilation cycle I" CFLO014433-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO011905-PA 6 Reactome: R-HSA-72163;MetaCyc: PWY-7511;Reactome: R-HSA-6782210;Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823 "mRNA Splicing - Major Pathway";"Protein ubiquitination";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex" CFLO011183-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO001427-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO015655-PA 6 Reactome: R-HSA-6791226;Reactome: R-HSA-450513;Reactome: R-HSA-429958;Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-450385 "Major pathway of rRNA processing in the nucleolus and cytosol";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA" CFLO004943-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" CFLO014832-PA 33 Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-6784531;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-2467813;Reactome: R-HSA-191859;Reactome: R-HSA-5663220;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-9609690;Reactome: R-HSA-159227;Reactome: R-HSA-68877;Reactome: R-HSA-5619107;Reactome: R-HSA-159230;Reactome: R-HSA-165054;Reactome: R-HSA-9648025;Reactome: R-HSA-3301854;Reactome: R-HSA-168325;Reactome: R-HSA-2500257;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-141444;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-3232142;Reactome: R-HSA-168276;Reactome: R-HSA-170822;Reactome: R-HSA-4615885;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231 "Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"tRNA processing in the nucleus";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"Separation of Sister Chromatids";"snRNP Assembly";"RHO GTPases Activate Formins";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"HCMV Early Events";"Transport of the SLBP independent Mature mRNA";"Mitotic Prometaphase";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP Dependant Mature mRNA";"Rev-mediated nuclear export of HIV RNA";"EML4 and NUDC in mitotic spindle formation";"Nuclear Pore Complex (NPC) Disassembly";"Viral Messenger RNA Synthesis";"Resolution of Sister Chromatid Cohesion";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Transcriptional regulation by small RNAs";"HCMV Late Events";"SUMOylation of ubiquitinylation proteins";"NS1 Mediated Effects on Host Pathways";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of DNA replication proteins";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript" CFLO002673-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO006867-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO006587-PA 4 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-8856828;Reactome: R-HSA-3928662 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"Clathrin-mediated endocytosis";"EPHB-mediated forward signaling" CFLO013597-PA 1 Reactome: R-HSA-211981 "Xenobiotics" CFLO005013-PA 6 Reactome: R-HSA-72649;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72706 "Translation initiation complex formation";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO005777-PA 11 Reactome: R-HSA-111457;Reactome: R-HSA-111459;Reactome: R-HSA-3299685;Reactome: R-HSA-1268020;Reactome: R-HSA-111463;Reactome: R-HSA-9627069;Reactome: R-HSA-2151201;Reactome: R-HSA-611105;Reactome: R-HSA-111458;Reactome: R-HSA-111464;Reactome: R-HSA-5628897 "Release of apoptotic factors from the mitochondria";"Activation of caspases through apoptosome-mediated cleavage";"Detoxification of Reactive Oxygen Species";"Mitochondrial protein import";"SMAC (DIABLO) binds to IAPs";"Regulation of the apoptosome activity";"Transcriptional activation of mitochondrial biogenesis";"Respiratory electron transport";"Formation of apoptosome";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"TP53 Regulates Metabolic Genes" CFLO007986-PA 5 Reactome: R-HSA-1222556;Reactome: R-HSA-983712;Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-9639288 "ROS and RNS production in phagocytes";"Ion channel transport";"Insulin receptor recycling";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1" CFLO015107-PA 1 MetaCyc: PWY-6938 "NADH repair" CFLO007473-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO002001-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" CFLO008928-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO018166-PA 14 Reactome: R-HSA-6782135;Reactome: R-HSA-5656169;Reactome: R-HSA-174411;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5685942;Reactome: R-HSA-5696397;Reactome: R-HSA-69091;Reactome: R-HSA-110320;Reactome: R-HSA-5656121;Reactome: R-HSA-5651801;Reactome: R-HSA-5655862;Reactome: R-HSA-5696400;Reactome: R-HSA-110312 "Dual incision in TC-NER";"Termination of translesion DNA synthesis";"Polymerase switching on the C-strand of the telomere";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"HDR through Homologous Recombination (HRR)";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Polymerase switching";"Translesion Synthesis by POLH";"Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLK";"Dual Incision in GG-NER";"Translesion synthesis by REV1" CFLO018893-PA 2 Reactome: R-HSA-379726;KEGG: 00970+6.1.1.20 "Mitochondrial tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" CFLO010428-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" CFLO008924-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68949;Reactome: R-HSA-68867 "Switching of origins to a post-replicative state";"Unwinding of DNA";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Orc1 removal from chromatin";"Assembly of the pre-replicative complex" CFLO017594-PA 16 Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO004556-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" CFLO007798-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO013727-PA 2 Reactome: R-HSA-5610787;Reactome: R-HSA-5620924 "Hedgehog 'off' state";"Intraflagellar transport" CFLO006603-PA 4 Reactome: R-HSA-5696395;Reactome: R-HSA-5696400;Reactome: R-HSA-6781823;Reactome: R-HSA-6782135 "Formation of Incision Complex in GG-NER";"Dual Incision in GG-NER";"Formation of TC-NER Pre-Incision Complex";"Dual incision in TC-NER" CFLO003448-PA 6 Reactome: R-HSA-456926;Reactome: R-HSA-418592;Reactome: R-HSA-416476;Reactome: R-HSA-428930;Reactome: R-HSA-399997;Reactome: R-HSA-434316 "Thrombin signalling through proteinase activated receptors (PARs)";"ADP signalling through P2Y purinoceptor 1";"G alpha (q) signalling events";"Thromboxane signalling through TP receptor";"Acetylcholine regulates insulin secretion";"Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion" CFLO006589-PA 4 KEGG: 00270+4.1.1.50;KEGG: 00330+4.1.1.50;MetaCyc: PWY-6834;Reactome: R-HSA-351202 "Cysteine and methionine metabolism";"Arginine and proline metabolism";"Spermidine biosynthesis III";"Metabolism of polyamines" CFLO010819-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO001069-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO012505-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" CFLO005698-PA 27 Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-159236;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-180746;Reactome: R-HSA-3301854;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-168333 "HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Nuclear import of Rev protein";"Nuclear Pore Complex (NPC) Disassembly";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery" CFLO007397-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO002187-PA 4 KEGG: 00250+6.3.4.4;Reactome: R-HSA-73817;KEGG: 00230+6.3.4.4;MetaCyc: PWY-7219 "Alanine, aspartate and glutamate metabolism";"Purine ribonucleoside monophosphate biosynthesis";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis" CFLO000502-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO006957-PA 5 KEGG: 00520+3.5.99.6;Reactome: R-HSA-70171;MetaCyc: PWY-6906;MetaCyc: PWY-6855;MetaCyc: PWY-5514 "Amino sugar and nucleotide sugar metabolism";"Glycolysis";"Chitin derivatives degradation";"Chitin degradation I (archaea)";"UDP-N-acetyl-D-galactosamine biosynthesis II" CFLO004457-PA 58 Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-180534;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-3108214;Reactome: R-HSA-69473;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5607764;MetaCyc: PWY-7511;Reactome: R-HSA-5693571;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-5668541;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253 "Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Vpu mediated degradation of CD4";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"SUMOylation of DNA damage response and repair proteins";"G2/M DNA damage checkpoint";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"CLEC7A (Dectin-1) signaling";"Protein ubiquitination";"Nonhomologous End-Joining (NHEJ)";"MAPK6/MAPK4 signaling";"Degradation of DVL";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"TNFR2 non-canonical NF-kB pathway";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex" CFLO003153-PA 1 Reactome: R-HSA-417973 "Adenosine P1 receptors" CFLO012683-PA 5 Reactome: R-HSA-879415;Reactome: R-HSA-901042;Reactome: R-HSA-532668;Reactome: R-HSA-8957275;Reactome: R-HSA-381426 "Advanced glycosylation endproduct receptor signaling";"Calnexin/calreticulin cycle";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)" CFLO008375-PA 3 Reactome: R-HSA-6807505;Reactome: R-HSA-76071;Reactome: R-HSA-749476 "RNA polymerase II transcribes snRNA genes";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" CFLO003100-PA 1 Reactome: R-HSA-204626 "Hypusine synthesis from eIF5A-lysine" CFLO005108-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO013575-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO002031-PA 6 MetaCyc: PWY-6807;KEGG: 00604+3.2.1.23;KEGG: 00052+3.2.1.23;KEGG: 00511+3.2.1.23;KEGG: 00600+3.2.1.23;KEGG: 00531+3.2.1.23 "Xyloglucan degradation II (exoglucanase)";"Glycosphingolipid biosynthesis - ganglio series";"Galactose metabolism";"Other glycan degradation";"Sphingolipid metabolism";"Glycosaminoglycan degradation" CFLO001636-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO005125-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO009063-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO015185-PA 1 Reactome: R-HSA-203754 "NOSIP mediated eNOS trafficking" CFLO007819-PA 1 Reactome: R-HSA-426048 "Arachidonate production from DAG" CFLO007349-PA 4 Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-73856;Reactome: R-HSA-159236 "mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO011296-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO016852-PA 24 Reactome: R-HSA-190840;Reactome: R-HSA-3371497;Reactome: R-HSA-5617833;Reactome: R-HSA-6811436;Reactome: R-HSA-9609736;Reactome: R-HSA-190861;Reactome: R-HSA-9609690;Reactome: R-HSA-68877;Reactome: R-HSA-5626467;Reactome: R-HSA-1445148;Reactome: R-HSA-2132295;Reactome: R-HSA-983189;Reactome: R-HSA-6807878;Reactome: R-HSA-6811434;Reactome: R-HSA-5663220;Reactome: R-HSA-437239;Reactome: R-HSA-8955332;Reactome: R-HSA-380320;Reactome: R-HSA-2500257;Reactome: R-HSA-8852276;Reactome: R-HSA-2467813;Reactome: R-HSA-9646399;Reactome: R-HSA-9648025;Reactome: R-HSA-9619483 "Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Cilium Assembly";"COPI-independent Golgi-to-ER retrograde traffic";"Assembly and cell surface presentation of NMDA receptors";"Gap junction assembly";"HCMV Early Events";"Mitotic Prometaphase";"RHO GTPases activate IQGAPs";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"MHC class II antigen presentation";"Kinesins";"COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic";"RHO GTPases Activate Formins";"Recycling pathway of L1";"Carboxyterminal post-translational modifications of tubulin";"Recruitment of NuMA to mitotic centrosomes";"Resolution of Sister Chromatid Cohesion";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Separation of Sister Chromatids";"Aggrephagy";"EML4 and NUDC in mitotic spindle formation";"Activation of AMPK downstream of NMDARs" CFLO009630-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO001423-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" CFLO004594-PA 12 Reactome: R-HSA-73762;Reactome: R-HSA-5250924;Reactome: R-HSA-210744;Reactome: R-HSA-2122947;Reactome: R-HSA-9013508;Reactome: R-HSA-2644606;Reactome: R-HSA-8941856;Reactome: R-HSA-3214847;Reactome: R-HSA-2894862;Reactome: R-HSA-1912408;Reactome: R-HSA-350054;Reactome: R-HSA-9013695 "RNA Polymerase I Transcription Initiation";"B-WICH complex positively regulates rRNA expression";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"NOTCH1 Intracellular Domain Regulates Transcription";"NOTCH3 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"RUNX3 regulates NOTCH signaling";"HATs acetylate histones";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Pre-NOTCH Transcription and Translation";"Notch-HLH transcription pathway";"NOTCH4 Intracellular Domain Regulates Transcription" CFLO011601-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO003574-PA 2 Reactome: R-HSA-196780;Reactome: R-HSA-3371599 "Biotin transport and metabolism";"Defective HLCS causes multiple carboxylase deficiency" CFLO018748-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO016840-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO010829-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" CFLO007423-PA 6 KEGG: 00010+5.4.2.11;KEGG: 00680+5.4.2.11;KEGG: 00260+5.4.2.11;MetaCyc: PWY-1622;MetaCyc: PWY-8004;MetaCyc: PWY-5484 "Glycolysis / Gluconeogenesis";"Methane metabolism";"Glycine, serine and threonine metabolism";"Formaldehyde assimilation I (serine pathway)";"Entner-Doudoroff pathway I";"Glycolysis II (from fructose 6-phosphate)" CFLO001058-PA 4 KEGG: 00564+3.1.1.7;Reactome: R-HSA-1483191;Reactome: R-HSA-422085;Reactome: R-HSA-112311 "Glycerophospholipid metabolism";"Synthesis of PC";"Synthesis, secretion, and deacylation of Ghrelin";"Neurotransmitter clearance" CFLO013244-PA 44 Reactome: R-HSA-444257;Reactome: R-HSA-9634638;Reactome: R-HSA-2871796;Reactome: R-HSA-2559585;Reactome: R-HSA-6811558;Reactome: R-HSA-6802952;Reactome: R-HSA-162658;Reactome: R-HSA-5663213;Reactome: R-HSA-202670;Reactome: R-HSA-8939211;Reactome: R-HSA-198753;Reactome: R-HSA-445144;Reactome: R-HSA-112409;Reactome: R-HSA-2559582;Reactome: R-HSA-8943724;Reactome: R-HSA-5674499;KEGG: 04150+2.7.11.24;Reactome: R-HSA-6802955;Reactome: R-HSA-881907;Reactome: R-HSA-8940973;Reactome: R-HSA-375165;Reactome: R-HSA-5654727;Reactome: R-HSA-5654732;Reactome: R-HSA-456926;Reactome: R-HSA-74749;Reactome: R-HSA-2559580;Reactome: R-HSA-3371453;Reactome: R-HSA-5675221;Reactome: R-HSA-6802948;Reactome: R-HSA-9627069;Reactome: R-HSA-5654733;Reactome: R-HSA-5654726;Reactome: R-HSA-2029482;Reactome: R-HSA-1295596;Reactome: R-HSA-9635465;Reactome: R-HSA-879415;Reactome: R-HSA-450341;Reactome: R-HSA-5668599;Reactome: R-HSA-170968;Reactome: R-HSA-5673001;Reactome: R-HSA-982772;Reactome: R-HSA-5674135;Reactome: R-HSA-6802946;Reactome: R-HSA-9649948 "RSK activation";"Estrogen-dependent nuclear events downstream of ESR-membrane signaling";"FCERI mediated MAPK activation";"Oncogene Induced Senescence";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Signaling by BRAF and RAF fusions";"Golgi Cisternae Pericentriolar Stack Reorganization";"RHO GTPases Activate WASPs and WAVEs";"ERKs are inactivated";"ESR-mediated signaling";"ERK/MAPK targets";"Signal transduction by L1";"RAF-independent MAPK1/3 activation";"Senescence-Associated Secretory Phenotype (SASP)";"Regulation of PTEN gene transcription";"Negative feedback regulation of MAPK pathway";"mTOR signaling pathway";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Gastrin-CREB signalling pathway via PKC and MAPK";"RUNX2 regulates osteoblast differentiation";"NCAM signaling for neurite out-growth";"Negative regulation of FGFR2 signaling";"Negative regulation of FGFR3 signaling";"Thrombin signalling through proteinase activated receptors (PARs)";"Signal attenuation";"Oxidative Stress Induced Senescence";"Regulation of HSF1-mediated heat shock response";"Negative regulation of MAPK pathway";"Signaling by high-kinase activity BRAF mutants";"Regulation of the apoptosome activity";"Negative regulation of FGFR4 signaling";"Negative regulation of FGFR1 signaling";"Regulation of actin dynamics for phagocytic cup formation";"Spry regulation of FGF signaling";"Suppression of apoptosis";"Advanced glycosylation endproduct receptor signaling";"Activation of the AP-1 family of transcription factors";"RHO GTPases Activate NADPH Oxidases";"Frs2-mediated activation";"RAF/MAP kinase cascade";"Growth hormone receptor signaling";"MAP2K and MAPK activation";"Signaling by moderate kinase activity BRAF mutants";"Signaling downstream of RAS mutants" CFLO014812-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO018648-PA 2 Reactome: R-HSA-4755609;Reactome: R-HSA-446199 "Defective DHDDS causes retinitis pigmentosa 59";"Synthesis of Dolichyl-phosphate" CFLO012310-PA 29 Reactome: R-HSA-167152;Reactome: R-HSA-6796648;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-674695;Reactome: R-HSA-5696400;Reactome: R-HSA-167200;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-167160;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-113418;Reactome: R-HSA-427413;Reactome: R-HSA-167158;Reactome: R-HSA-73776;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-75955;Reactome: R-HSA-167172;Reactome: R-HSA-167162 "Formation of HIV elongation complex in the absence of HIV Tat";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"RNA Polymerase II Pre-transcription Events";"Dual Incision in GG-NER";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Formation of the Early Elongation Complex";"NoRC negatively regulates rRNA expression";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Promoter Escape";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"RNA Polymerase II Transcription Elongation";"Transcription of the HIV genome";"RNA Polymerase II HIV Promoter Escape" CFLO000362-PA 2 KEGG: 00970+6.1.1.21;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" CFLO014368-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO000394-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO008792-PA 11 Reactome: R-HSA-170670;Reactome: R-HSA-418597;Reactome: R-HSA-163359;Reactome: R-HSA-164378;Reactome: R-HSA-432040;Reactome: R-HSA-418555;Reactome: R-HSA-163615;KEGG: 00230+4.6.1.1;Reactome: R-HSA-418594;Reactome: R-HSA-170660;Reactome: R-HSA-5610787 "Adenylate cyclase inhibitory pathway";"G alpha (z) signalling events";"Glucagon signaling in metabolic regulation";"PKA activation in glucagon signalling";"Vasopressin regulates renal water homeostasis via Aquaporins";"G alpha (s) signalling events";"PKA activation";"Purine metabolism";"G alpha (i) signalling events";"Adenylate cyclase activating pathway";"Hedgehog 'off' state" CFLO004371-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO017154-PA 10 KEGG: 00051+5.3.1.1;MetaCyc: PWY-6142;KEGG: 00010+5.3.1.1;MetaCyc: PWY-7003;MetaCyc: PWY-1042;KEGG: 00562+5.3.1.1;MetaCyc: PWY-5484;KEGG: 00710+5.3.1.1;Reactome: R-HSA-70171;Reactome: R-HSA-70263 "Fructose and mannose metabolism";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycolysis / Gluconeogenesis";"Glycerol degradation to butanol";"Glycolysis IV (plant cytosol)";"Inositol phosphate metabolism";"Glycolysis II (from fructose 6-phosphate)";"Carbon fixation in photosynthetic organisms";"Glycolysis";"Gluconeogenesis" CFLO007130-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO010726-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" CFLO011820-PA 1 Reactome: R-HSA-428890 "Role of ABL in ROBO-SLIT signaling" CFLO009851-PA 5 Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO004153-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO006133-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO008171-PA 3 Reactome: R-HSA-72163;Reactome: R-HSA-5250924;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"B-WICH complex positively regulates rRNA expression";"mRNA Splicing - Minor Pathway" CFLO008931-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO011825-PA 7 MetaCyc: PWY-8043;Reactome: R-HSA-5578999;MetaCyc: PWY-7255;Reactome: R-HSA-174403;KEGG: 00270+6.3.2.2;MetaCyc: PWY-6840;KEGG: 00480+6.3.2.2 "Ophthalmate biosynthesis";"Defective GCLC causes Hemolytic anemia due to gamma-glutamylcysteine synthetase deficiency (HAGGSD)";"Ergothioneine biosynthesis I (bacteria)";"Glutathione synthesis and recycling";"Cysteine and methionine metabolism";"Homoglutathione biosynthesis";"Glutathione metabolism" CFLO019786-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-6811438;Reactome: R-HSA-8876198 "Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic";"RAB GEFs exchange GTP for GDP on RABs" CFLO001478-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO001565-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" CFLO004727-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO000877-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" CFLO013542-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO005374-PA 7 KEGG: 00281+4.1.3.4;Reactome: R-HSA-77111;MetaCyc: PWY-5074;Reactome: R-HSA-9033241;KEGG: 00072+4.1.3.4;KEGG: 00650+4.1.3.4;KEGG: 00280+4.1.3.4 "Geraniol degradation";"Synthesis of Ketone Bodies";"Mevalonate degradation";"Peroxisomal protein import";"Synthesis and degradation of ketone bodies";"Butanoate metabolism";"Valine, leucine and isoleucine degradation" CFLO004111-PA 2 KEGG: 00030+2.7.6.1;KEGG: 00230+2.7.6.1 "Pentose phosphate pathway";"Purine metabolism" CFLO003953-PA 4 Reactome: R-HSA-4720475;Reactome: R-HSA-446193;KEGG: 00510+2.4.1.258;KEGG: 00513+2.4.1.258 "Defective ALG3 causes ALG3-CDG (CDG-1d)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"N-Glycan biosynthesis";"Various types of N-glycan biosynthesis" CFLO019070-PA 22 Reactome: R-HSA-76061;Reactome: R-HSA-73980;KEGG: 05235+3.1.3.16;Reactome: R-HSA-5250924;Reactome: R-HSA-73762;MetaCyc: PWY-5188;Reactome: R-HSA-2408522;Reactome: R-HSA-379716;KEGG: 00860+6.1.1.17;Reactome: R-HSA-76071;KEGG: 00970+6.1.1.17;KEGG: 04658+3.1.3.16;KEGG: 00970+6.1.1.15;KEGG: 04660+3.1.3.16;Reactome: R-HSA-76066;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-427413;Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-73780;Reactome: R-HSA-6782315 "RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Termination";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Transcription Initiation";"Tetrapyrrole biosynthesis I (from glutamate)";"Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation";"Porphyrin and chlorophyll metabolism";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Aminoacyl-tRNA biosynthesis";"Th1 and Th2 cell differentiation";"Aminoacyl-tRNA biosynthesis";"T cell receptor signaling pathway";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"NoRC negatively regulates rRNA expression";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Chain Elongation";"tRNA modification in the nucleus and cytosol" CFLO001756-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO000316-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO006146-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO001070-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO003187-PA 10 Reactome: R-HSA-201688;Reactome: R-HSA-1483191;Reactome: R-HSA-2514853;Reactome: R-HSA-445144;Reactome: R-HSA-6798695;Reactome: R-HSA-8948751;Reactome: R-HSA-8934903;Reactome: R-HSA-6804756;Reactome: R-HSA-6814122;Reactome: R-HSA-8939243 "WNT mediated activation of DVL";"Synthesis of PC";"Condensation of Prometaphase Chromosomes";"Signal transduction by L1";"Neutrophil degranulation";"Regulation of PTEN stability and activity";"Receptor Mediated Mitophagy";"Regulation of TP53 Activity through Phosphorylation";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO004993-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO011371-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" CFLO006370-PA 29 Reactome: R-HSA-167152;Reactome: R-HSA-73779;Reactome: R-HSA-73762;Reactome: R-HSA-6796648;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-112382;Reactome: R-HSA-5696400;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-113418;Reactome: R-HSA-73776;Reactome: R-HSA-427413;Reactome: R-HSA-167158;Reactome: R-HSA-167172;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-75955;Reactome: R-HSA-167162 "Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase I Transcription Initiation";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Formation of RNA Pol II elongation complex";"Dual Incision in GG-NER";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Formation of the Early Elongation Complex";"RNA Polymerase II Promoter Escape";"NoRC negatively regulates rRNA expression";"Formation of the HIV-1 Early Elongation Complex";"Transcription of the HIV genome";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II HIV Promoter Escape" CFLO010218-PA 5 MetaCyc: PWY-6902;MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14;Reactome: R-HSA-189085;MetaCyc: PWY-7822 "Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism";"Digestion of dietary carbohydrate";"Chitin degradation III (Serratia)" CFLO005739-PA 2 Reactome: R-HSA-8853659;Reactome: R-HSA-5673001 "RET signaling";"RAF/MAP kinase cascade" CFLO001725-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO013272-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO017942-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-72649;Reactome: R-HSA-156902 "Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Translation initiation complex formation";"Peptide chain elongation" CFLO000435-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO013534-PA 57 Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5668541;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236 "Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"TNFR2 non-canonical NF-kB pathway";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Neutrophil degranulation";"Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs" CFLO000889-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation" CFLO001783-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" CFLO009374-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO001541-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO000884-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" CFLO007347-PA 4 Reactome: R-HSA-72187;Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72163 "mRNA 3'-end processing";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA Splicing - Major Pathway" CFLO000073-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" CFLO013918-PA 2 KEGG: 00511+3.2.1.96;Reactome: R-HSA-532668 "Other glycan degradation";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle" CFLO000148-PA 3 MetaCyc: PWY-7799;MetaCyc: PWY-7800;Reactome: R-HSA-2514859 "Arg/N-end rule pathway (eukaryotic)";"Ac/N-end rule pathway";"Inactivation, recovery and regulation of the phototransduction cascade" CFLO018767-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO003274-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO007162-PA 3 Reactome: R-HSA-983168;Reactome: R-HSA-1358803;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Downregulation of ERBB2:ERBB3 signaling";"Protein ubiquitination" CFLO000936-PA 10 MetaCyc: PWY-4061;MetaCyc: PWY-4041;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-5826;KEGG: 00430+2.3.2.2;MetaCyc: PWY-7559;KEGG: 00460+2.3.2.2;MetaCyc: PWY-6842;MetaCyc: PWY-8001;MetaCyc: PWY-7112 "Glutathione-mediated detoxification I";"Gamma-glutamyl cycle";"Glutathione metabolism";"Hypoglycin biosynthesis";"Taurine and hypotaurine metabolism";"Glutathione degradation (DUG pathway";"Cyanoamino acid metabolism";"Glutathione-mediated detoxification II";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"4-hydroxy-2-nonenal detoxification" CFLO008170-PA 3 Reactome: R-HSA-2022928;KEGG: 00534+5.1.3.17;MetaCyc: PWY-6558 "HS-GAG biosynthesis";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin";"Heparan sulfate biosynthesis (late stages)" CFLO009027-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO011812-PA 42 Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847;Reactome: R-HSA-3214841;Reactome: R-HSA-201722;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-212300;Reactome: R-HSA-3214815;Reactome: R-HSA-73728;Reactome: R-HSA-606279;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-8936459;Reactome: R-HSA-5334118;Reactome: R-HSA-110328;Reactome: R-HSA-5625886;Reactome: R-HSA-2559580;Reactome: R-HSA-427413;Reactome: R-HSA-5693571;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-73772;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-9616222 "Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones";"PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex";"Transcriptional regulation by small RNAs";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"PRC2 methylates histones and DNA";"HDACs deacetylate histones";"RNA Polymerase I Promoter Opening";"Deposition of new CENPA-containing nucleosomes at the centromere";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"DNA methylation";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Oxidative Stress Induced Senescence";"NoRC negatively regulates rRNA expression";"Nonhomologous End-Joining (NHEJ)";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"RNA Polymerase I Promoter Escape";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"Packaging Of Telomere Ends";"HCMV Early Events";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Transcriptional regulation of granulopoiesis" CFLO013116-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO008291-PA 3 Reactome: R-HSA-9609523;Reactome: R-HSA-1236974;Reactome: R-HSA-1799339 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane";"ER-Phagosome pathway";"SRP-dependent cotranslational protein targeting to membrane" CFLO010953-PA 1 Reactome: R-HSA-5617833 "Cilium Assembly" CFLO008706-PA 5 Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-77595;Reactome: R-HSA-73856;Reactome: R-HSA-159231 "mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA Derived from an Intronless Transcript" CFLO012553-PA 1 Reactome: R-HSA-112308 "Presynaptic depolarization and calcium channel opening" CFLO016944-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO006988-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO005484-PA 1 Reactome: R-HSA-6802952 "Signaling by BRAF and RAF fusions" CFLO005822-PA 16 Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Translation initiation complex formation";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination" CFLO007400-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-159230;Reactome: R-HSA-77588 "RNA Polymerase II Transcription Termination";"Transport of the SLBP Dependant Mature mRNA";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs" CFLO015263-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO013926-PA 5 Reactome: R-HSA-6784531;Reactome: R-HSA-72163;Reactome: R-HSA-73856;Reactome: R-HSA-72187;Reactome: R-HSA-77595 "tRNA processing in the nucleus";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Termination";"mRNA 3'-end processing";"Processing of Intronless Pre-mRNAs" CFLO003019-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO013566-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO016374-PA 4 Reactome: R-HSA-1442490;Reactome: R-HSA-1650814;Reactome: R-HSA-2022090;Reactome: R-HSA-8948216 "Collagen degradation";"Collagen biosynthesis and modifying enzymes";"Assembly of collagen fibrils and other multimeric structures";"Collagen chain trimerization" CFLO002362-PA 1 Reactome: R-HSA-4615885 "SUMOylation of DNA replication proteins" CFLO018801-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO006089-PA 6 Reactome: R-HSA-163560;Reactome: R-HSA-400253;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16;Reactome: R-HSA-2173788 "Triglyceride catabolism";"Circadian Clock";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation";"Downregulation of TGF-beta receptor signaling" CFLO007341-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO013383-PA 3 MetaCyc: PWY-7942;Reactome: R-HSA-174403;KEGG: 00480+4.3.2.7 "5-oxo-L-proline metabolism";"Glutathione synthesis and recycling";"Glutathione metabolism" CFLO003077-PA 1 Reactome: R-HSA-110362 "POLB-Dependent Long Patch Base Excision Repair" CFLO004593-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" CFLO000001-PA 2 Reactome: R-HSA-1236394;Reactome: R-HSA-977443 "Signaling by ERBB4";"GABA receptor activation" CFLO017331-PA 7 Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-73980;Reactome: R-HSA-76071;Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73780 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Chain Elongation" CFLO008811-PA 17 Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-75955;KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;Reactome: R-HSA-167287;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-674695;Reactome: R-HSA-167290;Reactome: R-HSA-167200;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;KEGG: 05235+3.1.3.16;Reactome: R-HSA-167246 "Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Transcription Elongation";"Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Tat-mediated elongation of the HIV-1 transcript" CFLO006624-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO008782-PA 14 MetaCyc: PWY-7035;Reactome: R-HSA-75876;MetaCyc: PWY-7725;MetaCyc: PWY-8041;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-6598;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-5080 "(9Z)-tricosene biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Very long chain fatty acid biosynthesis I" CFLO009643-PA 2 Reactome: R-HSA-427413;Reactome: R-HSA-3214815 "NoRC negatively regulates rRNA expression";"HDACs deacetylate histones" CFLO004324-PA 3 Reactome: R-HSA-6798695;Reactome: R-HSA-202427;Reactome: R-HSA-6807004 "Neutrophil degranulation";"Phosphorylation of CD3 and TCR zeta chains";"Negative regulation of MET activity" CFLO004951-PA 10 Reactome: R-HSA-111464;Reactome: R-HSA-111458;Reactome: R-HSA-5628897;Reactome: R-HSA-9627069;Reactome: R-HSA-2151201;Reactome: R-HSA-611105;Reactome: R-HSA-111463;Reactome: R-HSA-111457;Reactome: R-HSA-111459;Reactome: R-HSA-3299685 "SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"Formation of apoptosome";"TP53 Regulates Metabolic Genes";"Regulation of the apoptosome activity";"Transcriptional activation of mitochondrial biogenesis";"Respiratory electron transport";"SMAC (DIABLO) binds to IAPs";"Release of apoptotic factors from the mitochondria";"Activation of caspases through apoptosome-mediated cleavage";"Detoxification of Reactive Oxygen Species" CFLO001800-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO005139-PA 13 Reactome: R-HSA-3928665;Reactome: R-HSA-2132295;Reactome: R-HSA-416993;Reactome: R-HSA-167590;Reactome: R-HSA-5140745;Reactome: R-HSA-8866427;Reactome: R-HSA-182218;Reactome: R-HSA-437239;Reactome: R-HSA-8964038;Reactome: R-HSA-8856828;Reactome: R-HSA-177504;Reactome: R-HSA-5099900;Reactome: R-HSA-8856825 "EPH-ephrin mediated repulsion of cells";"MHC class II antigen presentation";"Trafficking of GluR2-containing AMPA receptors";"Nef Mediated CD4 Down-regulation";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"VLDLR internalisation and degradation";"Nef Mediated CD8 Down-regulation";"Recycling pathway of L1";"LDL clearance";"Clathrin-mediated endocytosis";"Retrograde neurotrophin signalling";"WNT5A-dependent internalization of FZD4";"Cargo recognition for clathrin-mediated endocytosis" CFLO017341-PA 3 Reactome: R-HSA-110331;Reactome: R-HSA-110357;Reactome: R-HSA-110330 "Cleavage of the damaged purine";"Displacement of DNA glycosylase by APEX1";"Recognition and association of DNA glycosylase with site containing an affected purine" CFLO018009-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO000134-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO000300-PA 7 Reactome: R-HSA-380259;Reactome: R-HSA-380270;Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380284 "Loss of Nlp from mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Loss of proteins required for interphase microtubule organization from the centrosome" CFLO012771-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO004456-PA 2 KEGG: 00670+2.1.2.10;KEGG: 00260+2.1.2.10 "One carbon pool by folate";"Glycine, serine and threonine metabolism" CFLO002604-PA 3 Reactome: R-HSA-6807505;Reactome: R-HSA-76071;Reactome: R-HSA-749476 "RNA polymerase II transcribes snRNA genes";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" CFLO009692-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO018025-PA 1 Reactome: R-HSA-6804756 "Regulation of TP53 Activity through Phosphorylation" CFLO012483-PA 2 Reactome: R-HSA-2408508;Reactome: R-HSA-389661 "Metabolism of ingested SeMet, Sec, MeSec into H2Se";"Glyoxylate metabolism and glycine degradation" CFLO005348-PA 2 Reactome: R-HSA-382556;Reactome: R-HSA-5678895 "ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis" CFLO012099-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO002994-PA 14 Reactome: R-HSA-69091;Reactome: R-HSA-5651801;Reactome: R-HSA-110320;Reactome: R-HSA-5656121;Reactome: R-HSA-110312;Reactome: R-HSA-5655862;Reactome: R-HSA-5696400;Reactome: R-HSA-6782135;Reactome: R-HSA-174411;Reactome: R-HSA-5656169;Reactome: R-HSA-5696397;Reactome: R-HSA-5685942;Reactome: R-HSA-110314;Reactome: R-HSA-6782210 "Polymerase switching";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion Synthesis by POLH";"Translesion synthesis by POLI";"Translesion synthesis by REV1";"Translesion synthesis by POLK";"Dual Incision in GG-NER";"Dual incision in TC-NER";"Polymerase switching on the C-strand of the telomere";"Termination of translesion DNA synthesis";"Gap-filling DNA repair synthesis and ligation in GG-NER";"HDR through Homologous Recombination (HRR)";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO008800-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" CFLO000943-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" CFLO008250-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO006013-PA 3 Reactome: R-HSA-6783310;Reactome: R-HSA-5689880;Reactome: R-HSA-110314 "Fanconi Anemia Pathway";"Ub-specific processing proteases";"Recognition of DNA damage by PCNA-containing replication complex" CFLO018806-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" CFLO005692-PA 17 MetaCyc: PWY-7184;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7224;MetaCyc: PWY-7226;MetaCyc: PWY-7220;MetaCyc: PWY-7205;MetaCyc: PWY-7227;MetaCyc: PWY-7221;MetaCyc: PWY-7210;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7176;MetaCyc: PWY-6545;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7197;MetaCyc: PWY-7222;MetaCyc: PWY-7198;MetaCyc: PWY-7187 "Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Drug metabolism - other enzymes";"Purine deoxyribonucleosides salvage";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis II";"CMP phosphorylation";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine ribonucleotides de novo biosynthesis";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine metabolism";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Purine metabolism";"Pyrimidine deoxyribonucleotide phosphorylation";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II" CFLO000060-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO005148-PA 12 MetaCyc: PWY-5873;MetaCyc: PWY-5872;Reactome: R-HSA-2142789;MetaCyc: PWY-5855;MetaCyc: PWY-5871;KEGG: 00130+2.5.1.39;MetaCyc: PWY-5857;MetaCyc: PWY-5870;Reactome: R-HSA-1268020;MetaCyc: PWY-6978;MetaCyc: PWY-6708;MetaCyc: PWY-5856 "Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol biosynthesis";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (eukaryotic)";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-10 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (eukaryotic)";"Mitochondrial protein import";"Plastoquinol-9 biosynthesis II";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (prokaryotic)" CFLO007954-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" CFLO010087-PA 14 KEGG: 00260+2.1.2.1;MetaCyc: PWY-3841;MetaCyc: PWY-1622;KEGG: 00460+2.1.2.1;MetaCyc: PWY-3661-1;Reactome: R-HSA-196757;MetaCyc: PWY-2201;KEGG: 00630+2.1.2.1;MetaCyc: PWY-5497;MetaCyc: PWY-181;MetaCyc: PWY-3661;KEGG: 00670+2.1.2.1;MetaCyc: PWY-2161;KEGG: 00680+2.1.2.1 "Glycine, serine and threonine metabolism";"Folate transformations II (plants)";"Formaldehyde assimilation I (serine pathway)";"Cyanoamino acid metabolism";"Glycine betaine degradation II (mammalian)";"Metabolism of folate and pterines";"Folate transformations I";"Glyoxylate and dicarboxylate metabolism";"Purine nucleobases degradation II (anaerobic)";"Photorespiration ";"Glycine betaine degradation I";"One carbon pool by folate";"Folate polyglutamylation";"Methane metabolism" CFLO000419-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO006561-PA 24 Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-1445148;Reactome: R-HSA-6811434;Reactome: R-HSA-5617833;Reactome: R-HSA-3371497;Reactome: R-HSA-190840;Reactome: R-HSA-5626467;Reactome: R-HSA-68877;Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-190861;Reactome: R-HSA-9609736;Reactome: R-HSA-9646399;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-8852276;Reactome: R-HSA-380320;Reactome: R-HSA-9619483;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-8955332;Reactome: R-HSA-437239 "COPI-mediated anterograde transport";"Kinesins";"MHC class II antigen presentation";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"COPI-dependent Golgi-to-ER retrograde traffic";"Cilium Assembly";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"RHO GTPases activate IQGAPs";"Mitotic Prometaphase";"HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"Gap junction assembly";"Assembly and cell surface presentation of NMDA receptors";"Aggrephagy";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Recruitment of NuMA to mitotic centrosomes";"Activation of AMPK downstream of NMDARs";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Carboxyterminal post-translational modifications of tubulin";"Recycling pathway of L1" CFLO001953-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO001281-PA 2 KEGG: 00970+6.1.1.2;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" CFLO004491-PA 1 Reactome: R-HSA-3238698 "WNT ligand biogenesis and trafficking" CFLO016514-PA 2 Reactome: R-HSA-917729;Reactome: R-HSA-9610379 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events" CFLO006706-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" CFLO003346-PA 2 Reactome: R-HSA-8983711;Reactome: R-HSA-909733 "OAS antiviral response";"Interferon alpha/beta signaling" CFLO000255-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" CFLO012287-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO002689-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO000173-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" CFLO009452-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO013824-PA 6 KEGG: 00020+4.2.1.3;KEGG: 00720+4.2.1.3;Reactome: R-HSA-71403;Reactome: R-HSA-1268020;KEGG: 00630+4.2.1.3;KEGG: 00290+4.2.1.33 "Citrate cycle (TCA cycle)";"Carbon fixation pathways in prokaryotes";"Citric acid cycle (TCA cycle)";"Mitochondrial protein import";"Glyoxylate and dicarboxylate metabolism";"Valine, leucine and isoleucine biosynthesis" CFLO004614-PA 1 Reactome: R-HSA-426048 "Arachidonate production from DAG" CFLO015687-PA 3 Reactome: R-HSA-196780;Reactome: R-HSA-3371599;Reactome: R-HSA-70263 "Biotin transport and metabolism";"Defective HLCS causes multiple carboxylase deficiency";"Gluconeogenesis" CFLO009616-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO002033-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO012150-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO001429-PA 1 Reactome: R-HSA-5368286 "Mitochondrial translation initiation" CFLO017483-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing" CFLO005671-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO012037-PA 6 MetaCyc: PWY-8088;MetaCyc: PWY-2942;KEGG: 00300+4.3.3.7;MetaCyc: PWY-2941;MetaCyc: PWY-5097;KEGG: 00261+4.3.3.7 "Dipicolinate biosynthesis";"L-lysine biosynthesis III";"Lysine biosynthesis";"L-lysine biosynthesis II";"L-lysine biosynthesis VI";"Monobactam biosynthesis" CFLO004734-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO007871-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO003179-PA 1 Reactome: R-HSA-6811438 "Intra-Golgi traffic" CFLO002937-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" CFLO005105-PA 3 Reactome: R-HSA-392154;Reactome: R-HSA-445355;KEGG: 00230+4.6.1.2 "Nitric oxide stimulates guanylate cyclase";"Smooth Muscle Contraction";"Purine metabolism" CFLO005656-PA 1 Reactome: R-HSA-1855231 "Synthesis of IPs in the ER lumen" CFLO002711-PA 1 Reactome: R-HSA-5632928 "Defective Mismatch Repair Associated With MSH2" CFLO014117-PA 16 Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"Peptide chain elongation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO011191-PA 29 Reactome: R-HSA-5696400;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-167152;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-6796648;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-73776;Reactome: R-HSA-427413;Reactome: R-HSA-167158;Reactome: R-HSA-167172;Reactome: R-HSA-75955;Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-167162;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-113418 "Dual Incision in GG-NER";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Promoter Escape";"NoRC negatively regulates rRNA expression";"Formation of the HIV-1 Early Elongation Complex";"Transcription of the HIV genome";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"RNA Polymerase II HIV Promoter Escape";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Formation of the Early Elongation Complex" CFLO002546-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO006994-PA 18 MetaCyc: PWY-7416;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;MetaCyc: PWY-7783;Reactome: R-HSA-1482801;MetaCyc: PWY-7409;KEGG: 00590+3.1.1.4;KEGG: 00591+3.1.1.4;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166;MetaCyc: PWY-8053;Reactome: R-HSA-1482925;MetaCyc: PWY-8051;Reactome: R-HSA-1482922;Reactome: R-HSA-1482788;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482839;MetaCyc: PWY-7417 "Phospholipid remodeling (phosphatidylcholine, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Plasmalogen degradation";"Acyl chain remodelling of PS";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Arachidonic acid metabolism";"Linoleic acid metabolism";"Ether lipid metabolism";"Synthesis of PA";"Anandamide biosynthesis II";"Acyl chain remodelling of PG";"Anandamide biosynthesis I";"Acyl chain remodelling of PI";"Acyl chain remodelling of PC";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)" CFLO003287-PA 6 KEGG: 00330+2.6.1.13;MetaCyc: PWY-6344;MetaCyc: PWY-4981;MetaCyc: PWY-6922;Reactome: R-HSA-8964539;MetaCyc: PWY-3341 "Arginine and proline metabolism";"L-ornithine degradation II (Stickland reaction)";"L-proline biosynthesis II (from arginine)";"L-Ndelta-acetylornithine biosynthesis";"Glutamate and glutamine metabolism";"L-proline biosynthesis III (from L-ornithine)" CFLO000334-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1 "Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Human papillomavirus infection";"Thermogenesis" CFLO019633-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO006991-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-446203 "SRP-dependent cotranslational protein targeting to membrane";"Asparagine N-linked glycosylation" CFLO000163-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO012172-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" CFLO002708-PA 6 KEGG: 00052+2.7.7.12;KEGG: 00520+2.7.7.12;MetaCyc: PWY-6317;Reactome: R-HSA-70370;MetaCyc: PWY-6527;Reactome: R-HSA-5609978 "Galactose metabolism";"Amino sugar and nucleotide sugar metabolism";"D-galactose degradation I (Leloir pathway)";"Galactose catabolism";"Stachyose degradation";"Defective GALT can cause Galactosemia" CFLO002375-PA 2 Reactome: R-HSA-5689896;Reactome: R-HSA-195253 "Ovarian tumor domain proteases";"Degradation of beta-catenin by the destruction complex" CFLO012727-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO000913-PA 6 Reactome: R-HSA-5693607;Reactome: R-HSA-5685938;Reactome: R-HSA-176187;Reactome: R-HSA-5693616;Reactome: R-HSA-69473;Reactome: R-HSA-6804756 "Processing of DNA double-strand break ends";"HDR through Single Strand Annealing (SSA)";"Activation of ATR in response to replication stress";"Presynaptic phase of homologous DNA pairing and strand exchange";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation" CFLO016801-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" CFLO018754-PA 1 Reactome: R-HSA-9033241 "Peroxisomal protein import" CFLO007171-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO006533-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO009113-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO014202-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO000294-PA 4 Reactome: R-HSA-532668;Reactome: R-HSA-5696394;Reactome: R-HSA-3108214;Reactome: R-HSA-5696395 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"DNA Damage Recognition in GG-NER";"SUMOylation of DNA damage response and repair proteins";"Formation of Incision Complex in GG-NER" CFLO018847-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO003257-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO002609-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO014598-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO009983-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO006633-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO008817-PA 6 Reactome: R-HSA-176187;Reactome: R-HSA-5693607;Reactome: R-HSA-5685938;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-5693616 "Activation of ATR in response to replication stress";"Processing of DNA double-strand break ends";"HDR through Single Strand Annealing (SSA)";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange" CFLO014112-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO003089-PA 8 MetaCyc: PWY-7117;MetaCyc: PWY-5744;MetaCyc: PWY-5743;MetaCyc: PWY-7115;MetaCyc: PWY-5789;KEGG: 00910+4.2.1.1;MetaCyc: PWY-241;MetaCyc: PWY-6142 "C4 photosynthetic carbon assimilation cycle, PEPCK type";"Glyoxylate assimilation";"3-hydroxypropanoate cycle";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Nitrogen metabolism";"C4 photosynthetic carbon assimilation cycle, NADP-ME type";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)" CFLO003960-PA 6 Reactome: R-HSA-9615017;Reactome: R-HSA-9033241;KEGG: 00380+1.11.1.6;KEGG: 00630+1.11.1.6;Reactome: R-HSA-3299685;Reactome: R-HSA-6798695 "FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Peroxisomal protein import";"Tryptophan metabolism";"Glyoxylate and dicarboxylate metabolism";"Detoxification of Reactive Oxygen Species";"Neutrophil degranulation" CFLO006879-PA 4 MetaCyc: PWY-6987;MetaCyc: PWY-7382;Reactome: R-HSA-389661;KEGG: 00785+2.3.1.181 "Lipoate biosynthesis and incorporation III (Bacillus)";"Lipoate biosynthesis and incorporation IV (yeast)";"Glyoxylate metabolism and glycine degradation";"Lipoic acid metabolism" CFLO015984-PA 56 Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785 "Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome" CFLO005900-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO006722-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO005895-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO013411-PA 13 Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO018658-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68949;Reactome: R-HSA-68867 "Switching of origins to a post-replicative state";"Unwinding of DNA";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Orc1 removal from chromatin";"Assembly of the pre-replicative complex" CFLO004333-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO002907-PA 6 Reactome: R-HSA-5693579;Reactome: R-HSA-5693568;Reactome: R-HSA-5693554;Reactome: R-HSA-912446;Reactome: R-HSA-5693616;Reactome: R-HSA-5685942 "Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Meiotic recombination";"Presynaptic phase of homologous DNA pairing and strand exchange";"HDR through Homologous Recombination (HRR)" CFLO017858-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" CFLO014417-PA 8 MetaCyc: PWY-7184;MetaCyc: PWY-7210;Reactome: R-HSA-499943;MetaCyc: PWY-6545;KEGG: 00240+2.7.4.9;MetaCyc: PWY-7197;MetaCyc: PWY-7187;MetaCyc: PWY-7198 "Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotide phosphorylation";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV" CFLO006718-PA 9 Reactome: R-HSA-381340;Reactome: R-HSA-400253;Reactome: R-HSA-5617472;Reactome: R-HSA-2426168;Reactome: R-HSA-400206;Reactome: R-HSA-1989781;Reactome: R-HSA-2151201;Reactome: R-HSA-1368108;Reactome: R-HSA-1368082 "Transcriptional regulation of white adipocyte differentiation";"Circadian Clock";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Activation of gene expression by SREBF (SREBP)";"Regulation of lipid metabolism by PPARalpha";"PPARA activates gene expression";"Transcriptional activation of mitochondrial biogenesis";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"RORA activates gene expression" CFLO009134-PA 2 Reactome: R-HSA-428890;KEGG: 04660+2.7.10.2 "Role of ABL in ROBO-SLIT signaling";"T cell receptor signaling pathway" CFLO018007-PA 8 MetaCyc: PWY-7193;KEGG: 00983+3.5.4.5;Reactome: R-HSA-6798695;MetaCyc: PWY-7199;MetaCyc: PWY-6556;KEGG: 00240+3.5.4.5;MetaCyc: PWY-7181;Reactome: R-HSA-73614 "Pyrimidine ribonucleosides salvage I";"Drug metabolism - other enzymes";"Neutrophil degranulation";"Pyrimidine deoxyribonucleosides salvage";"Pyrimidine ribonucleosides salvage II";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleosides degradation";"Pyrimidine salvage" CFLO007199-PA 2 KEGG: 00030+1.1.1.47;Reactome: R-HSA-71384 "Pentose phosphate pathway";"Ethanol oxidation" CFLO009887-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-71403 "Respiratory electron transport";"Citric acid cycle (TCA cycle)" CFLO010012-PA 2 Reactome: R-HSA-180024;KEGG: 00230+3.1.4.53 "DARPP-32 events";"Purine metabolism" CFLO011048-PA 3 Reactome: R-HSA-204174;Reactome: R-HSA-156590;Reactome: R-HSA-8963684 "Regulation of pyruvate dehydrogenase (PDH) complex";"Glutathione conjugation";"Tyrosine catabolism" CFLO001653-PA 3 Reactome: R-HSA-2132295;Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "MHC class II antigen presentation";"Detoxification of Reactive Oxygen Species";"Glutathione metabolism" CFLO007743-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO007988-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO017760-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO009442-PA 1 KEGG: 00010+5.1.3.15 "Glycolysis / Gluconeogenesis" CFLO012779-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO011870-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO003937-PA 7 Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-73980;Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73780 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Chain Elongation" CFLO004160-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO015004-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO008493-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO003024-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO016302-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency" CFLO000673-PA 52 Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-180534;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-5668541;Reactome: R-HSA-5607764;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128 "Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vpu mediated degradation of CD4";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"TNFR2 non-canonical NF-kB pathway";"CLEC7A (Dectin-1) signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling" CFLO004125-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO008059-PA 2 Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" CFLO018418-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO000670-PA 5 Reactome: R-HSA-1912408;Reactome: R-HSA-1912420;Reactome: R-HSA-5083630;Reactome: R-HSA-350054;Reactome: R-HSA-1912399 "Pre-NOTCH Transcription and Translation";"Pre-NOTCH Processing in Golgi";"Defective LFNG causes SCDO3";"Notch-HLH transcription pathway";"Pre-NOTCH Processing in the Endoplasmic Reticulum" CFLO001993-PA 8 Reactome: R-HSA-6791461;KEGG: 00051+5.3.1.6;KEGG: 00030+5.3.1.6;MetaCyc: PWY-5723;Reactome: R-HSA-5659996;MetaCyc: PWY-1861;KEGG: 00710+5.3.1.6;Reactome: R-HSA-71336 "RPIA deficiency: failed conversion of RU5P to R5P";"Fructose and mannose metabolism";"Pentose phosphate pathway";"Rubisco shunt";"RPIA deficiency: failed conversion of R5P to RU5P";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Carbon fixation in photosynthetic organisms";"Pentose phosphate pathway" CFLO012642-PA 4 Reactome: R-HSA-2132295;Reactome: R-HSA-3371497;Reactome: R-HSA-6807878;Reactome: R-HSA-6811436 "MHC class II antigen presentation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-mediated anterograde transport";"COPI-independent Golgi-to-ER retrograde traffic" CFLO010555-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" CFLO005673-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO011343-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO008550-PA 6 MetaCyc: PWY-6722;MetaCyc: PWY-4381;Reactome: R-HSA-196780;MetaCyc: PWY-5789;MetaCyc: PWY-5743;MetaCyc: PWY-5744 "Candicidin biosynthesis";"Fatty acid biosynthesis initiation (bacteria and plants)";"Biotin transport and metabolism";"3-hydroxypropanoate/4-hydroxybutanate cycle";"3-hydroxypropanoate cycle";"Glyoxylate assimilation" CFLO005962-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-264876;Reactome: R-HSA-5620916 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Insulin processing";"VxPx cargo-targeting to cilium" CFLO000361-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO013513-PA 2 Reactome: R-HSA-3928665;Reactome: R-HSA-2682334 "EPH-ephrin mediated repulsion of cells";"EPH-Ephrin signaling" CFLO011821-PA 1 Reactome: R-HSA-428890 "Role of ABL in ROBO-SLIT signaling" CFLO018249-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" CFLO004926-PA 4 KEGG: 00520+3.2.1.14;MetaCyc: PWY-6855;MetaCyc: PWY-6902;MetaCyc: PWY-7822 "Amino sugar and nucleotide sugar metabolism";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Chitin degradation III (Serratia)" CFLO014236-PA 1 Reactome: R-HSA-71064 "Lysine catabolism" CFLO008607-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" CFLO007753-PA 7 Reactome: R-HSA-9023661;Reactome: R-HSA-2142691;Reactome: R-HSA-9018896;Reactome: R-HSA-9020265;Reactome: R-HSA-9018681;Reactome: R-HSA-6798695;Reactome: R-HSA-9018676 "Biosynthesis of E-series 18(R)-resolvins";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Biosynthesis of E-series 18(S)-resolvins";"Biosynthesis of aspirin-triggered D-series resolvins";"Biosynthesis of protectins";"Neutrophil degranulation";"Biosynthesis of D-series resolvins" CFLO019370-PA 5 Reactome: R-HSA-532668;MetaCyc: PWY-7918;MetaCyc: PWY-7919;KEGG: 00510+3.2.1.106;Reactome: R-HSA-4793954 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Protein N-glycosylation processing phase (yeast)";"Protein N-glycosylation processing phase (plants and animals)";"N-Glycan biosynthesis";"Defective MOGS causes MOGS-CDG (CDG-2b)" CFLO003438-PA 6 MetaCyc: PWY-6907;MetaCyc: PWY-6898;KEGG: 00730+2.7.6.2;MetaCyc: PWY-6908;MetaCyc: PWY-7356;Reactome: R-HSA-196819 "Thiamine diphosphate biosynthesis III (Staphylococcus)";"Thiamine salvage III";"Thiamine metabolism";"Thiamine diphosphate biosynthesis IV (eukaryotes)";"Thiamine salvage IV (yeast)";"Vitamin B1 (thiamin) metabolism" CFLO004869-PA 9 Reactome: R-HSA-5218920;Reactome: R-HSA-2029482;Reactome: R-HSA-2871809;Reactome: R-HSA-4420097;Reactome: R-HSA-416482;Reactome: R-HSA-2871796;Reactome: R-HSA-194840;Reactome: R-HSA-114604;Reactome: R-HSA-193648 "VEGFR2 mediated vascular permeability";"Regulation of actin dynamics for phagocytic cup formation";"FCERI mediated Ca+2 mobilization";"VEGFA-VEGFR2 Pathway";"G alpha (12/13) signalling events";"FCERI mediated MAPK activation";"Rho GTPase cycle";"GPVI-mediated activation cascade";"NRAGE signals death through JNK" CFLO001790-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" CFLO002622-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO004190-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO002009-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO013484-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO018657-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-5620916;Reactome: R-HSA-264876 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"VxPx cargo-targeting to cilium";"Insulin processing" CFLO001477-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO004204-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO006857-PA 9 Reactome: R-HSA-1483166;KEGG: 00564+1.1.1.94;KEGG: 00564+1.1.1.8;MetaCyc: PWY-6118;MetaCyc: PWY-5667;MetaCyc: PWY-5981;MetaCyc: PWY-7385;MetaCyc: PWY-7902;MetaCyc: PWY-7411 "Synthesis of PA";"Glycerophospholipid metabolism";"Glycerophospholipid metabolism";"Glycerol-3-phosphate shuttle";"CDP-diacylglycerol biosynthesis I";"CDP-diacylglycerol biosynthesis III";"1,3-propanediol biosynthesis (engineered)";"Glucosylglycerol biosynthesis";"Phosphatidate biosynthesis (yeast)" CFLO013974-PA 4 Reactome: R-HSA-5685942;Reactome: R-HSA-5693554;Reactome: R-HSA-5693579;Reactome: R-HSA-5693568 "HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates" CFLO008262-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO004196-PA 52 Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-72163;Reactome: R-HSA-167290;Reactome: R-HSA-76061;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-5601884;Reactome: R-HSA-73780;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-167287;Reactome: R-HSA-9018519;Reactome: R-HSA-167162;Reactome: R-HSA-427413;Reactome: R-HSA-749476;Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-75955;Reactome: R-HSA-6796648;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-5578749;Reactome: R-HSA-112382;Reactome: R-HSA-5250924;Reactome: R-HSA-6781823;Reactome: R-HSA-5617472;Reactome: R-HSA-167242;Reactome: R-HSA-76071;Reactome: R-HSA-167152;Reactome: R-HSA-6781827;Reactome: R-HSA-8851708;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-73980;Reactome: R-HSA-167200;Reactome: R-HSA-168325;Reactome: R-HSA-6803529;Reactome: R-HSA-6782210;Reactome: R-HSA-76066;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-72165;Reactome: R-HSA-167158;Reactome: R-HSA-1834949;Reactome: R-HSA-167238;Reactome: R-HSA-73776;Reactome: R-HSA-167172;Reactome: R-HSA-203927 "Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Splicing - Major Pathway";"Pausing and recovery of HIV elongation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"PIWI-interacting RNA (piRNA) biogenesis";"RNA Polymerase III Chain Elongation";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"HIV elongation arrest and recovery";"Estrogen-dependent gene expression";"RNA Polymerase II HIV Promoter Escape";"NoRC negatively regulates rRNA expression";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"RNA Polymerase II Transcription Elongation";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Transcriptional regulation by small RNAs";"Formation of RNA Pol II elongation complex";"B-WICH complex positively regulates rRNA expression";"Formation of TC-NER Pre-Incision Complex";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Formation of HIV elongation complex in the absence of HIV Tat";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase III Transcription Termination";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Viral Messenger RNA Synthesis";"FGFR2 alternative splicing";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Minor Pathway";"Formation of the HIV-1 Early Elongation Complex";"Cytosolic sensors of pathogen-associated DNA";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Promoter Escape";"Transcription of the HIV genome";"MicroRNA (miRNA) biogenesis" CFLO004539-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO015446-PA 2 Reactome: R-HSA-392154;Reactome: R-HSA-1222556 "Nitric oxide stimulates guanylate cyclase";"ROS and RNS production in phagocytes" CFLO007992-PA 1 Reactome: R-HSA-6793080 "rRNA modification in the mitochondrion" CFLO012224-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO015250-PA 4 MetaCyc: PWY-6557;KEGG: 00532+2.4.2.26;Reactome: R-HSA-1971475;KEGG: 00534+2.4.2.26 "Glycosaminoglycan-protein linkage region biosynthesis";"Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate";"A tetrasaccharide linker sequence is required for GAG synthesis";"Glycosaminoglycan biosynthesis - heparan sulfate / heparin" CFLO015912-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO013761-PA 1 Reactome: R-HSA-74217 "Purine salvage" CFLO009391-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO015657-PA 5 Reactome: R-HSA-112409;KEGG: 05235+3.1.3.16;Reactome: R-HSA-5675221;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "RAF-independent MAPK1/3 activation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Negative regulation of MAPK pathway";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO003993-PA 13 KEGG: 00720+1.5.1.5+3.5.4.9;MetaCyc: PWY-3841;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-7909;MetaCyc: PWY-6613;MetaCyc: PWY-2161;KEGG: 00670+6.3.4.3;MetaCyc: PWY-1722;MetaCyc: PWY-5030;Reactome: R-HSA-196757;MetaCyc: PWY-2201;KEGG: 00720+6.3.4.3;MetaCyc: PWY-5497 "Carbon fixation pathways in prokaryotes";"Folate transformations II (plants)";"One carbon pool by folate";"Formaldehyde oxidation VII (THF pathway)";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Folate polyglutamylation";"One carbon pool by folate";"Formate assimilation into 5,10-methylenetetrahydrofolate";"L-histidine degradation III";"Metabolism of folate and pterines";"Folate transformations I";"Carbon fixation pathways in prokaryotes";"Purine nucleobases degradation II (anaerobic)" CFLO005885-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO008851-PA 13 Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-2408557 "Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis" CFLO007757-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO004684-PA 13 MetaCyc: PWY-7254;MetaCyc: PWY-5913;MetaCyc: PWY-8086;KEGG: 00020+4.2.1.2;MetaCyc: PWY-561;MetaCyc: PWY-5690;MetaCyc: PWY-6969;MetaCyc: PWY-5392;Reactome: R-HSA-71403;KEGG: 00620+4.2.1.2;KEGG: 00720+4.2.1.2;MetaCyc: PWY-6728;MetaCyc: PWY-7384 "TCA cycle VII (acetate-producers)";"Partial TCA cycle (obligate autotrophs)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Citrate cycle (TCA cycle)";"Superpathway of glyoxylate cycle and fatty acid degradation";"TCA cycle II (plants and fungi)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"Citric acid cycle (TCA cycle)";"Pyruvate metabolism";"Carbon fixation pathways in prokaryotes";"Methylaspartate cycle";"Anaerobic energy metabolism (invertebrates, mitochondrial)" CFLO013825-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO000289-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO005636-PA 27 Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-180746;Reactome: R-HSA-165054;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-3232142 "Transcriptional regulation by small RNAs";"HCMV Late Events";"snRNP Assembly";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein";"Rev-mediated nuclear export of HIV RNA";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins" CFLO016216-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO010612-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO019698-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO008196-PA 2 KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" CFLO013489-PA 3 Reactome: R-HSA-189451;KEGG: 00860+2.5.1.141;MetaCyc: PWY-7856 "Heme biosynthesis";"Porphyrin and chlorophyll metabolism";"Heme a biosynthesis" CFLO002280-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO018567-PA 2 Reactome: R-HSA-4086398;Reactome: R-HSA-418457 "Ca2+ pathway";"cGMP effects" CFLO009649-PA 4 KEGG: 00983+2.7.1.48;Reactome: R-HSA-73614;MetaCyc: PWY-7193;KEGG: 00240+2.7.1.48 "Drug metabolism - other enzymes";"Pyrimidine salvage";"Pyrimidine ribonucleosides salvage I";"Pyrimidine metabolism" CFLO017732-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO016897-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156827;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823 "Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation" CFLO016891-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO010957-PA 14 MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-8041;MetaCyc: PWY-7725;Reactome: R-HSA-75876;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7035 "Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Synthesis of very long-chain fatty acyl-CoAs";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"(9Z)-tricosene biosynthesis" CFLO000978-PA 2 Reactome: R-HSA-2682334;Reactome: R-HSA-3928665 "EPH-Ephrin signaling";"EPH-ephrin mediated repulsion of cells" CFLO004818-PA 27 Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-5619107;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-168333;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-180746;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-159236;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377 "NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Nuclear import of Rev protein";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins" CFLO013288-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO006711-PA 5 Reactome: R-HSA-983712;Reactome: R-HSA-1222556;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-77387 "Ion channel transport";"ROS and RNS production in phagocytes";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Insulin receptor recycling" CFLO006768-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695 "Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex" CFLO014860-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO004620-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO001497-PA 5 Reactome: R-HSA-211976;Reactome: R-HSA-5579026;Reactome: R-HSA-1362409;Reactome: R-HSA-2395516;Reactome: R-HSA-196108 "Endogenous sterols";"Defective CYP11A1 causes Adrenal insufficiency, congenital, with 46,XY sex reversal (AICSR)";"Mitochondrial iron-sulfur cluster biogenesis";"Electron transport from NADPH to Ferredoxin";"Pregnenolone biosynthesis" CFLO004154-PA 2 Reactome: R-HSA-381038;Reactome: R-HSA-1799339 "XBP1(S) activates chaperone genes";"SRP-dependent cotranslational protein targeting to membrane" CFLO012042-PA 4 Reactome: R-HSA-189085;Reactome: R-HSA-416476;Reactome: R-HSA-416482;Reactome: R-HSA-390696 "Digestion of dietary carbohydrate";"G alpha (q) signalling events";"G alpha (12/13) signalling events";"Adrenoceptors" CFLO012379-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO008330-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" CFLO017472-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO012171-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" CFLO018559-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO008700-PA 2 MetaCyc: PWY-6749;KEGG: 00520+5.4.2.10 "CMP-legionaminate biosynthesis I";"Amino sugar and nucleotide sugar metabolism" CFLO005540-PA 5 Reactome: R-HSA-2894862;Reactome: R-HSA-350054;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-3214815 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Notch-HLH transcription pathway";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"HDACs deacetylate histones" CFLO010507-PA 7 Reactome: R-HSA-2979096;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2122948;Reactome: R-HSA-2691232;Reactome: R-HSA-2894862;MetaCyc: PWY-7511 "NOTCH2 Activation and Transmission of Signal to the Nucleus";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Protein ubiquitination" CFLO001500-PA 2 Reactome: R-HSA-382556;Reactome: R-HSA-5678895 "ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis" CFLO002536-PA 5 Reactome: R-HSA-1660499;Reactome: R-HSA-8856828;KEGG: 00562+3.1.3.36;MetaCyc: PWY-6368;KEGG: 04070+3.1.3.36 "Synthesis of PIPs at the plasma membrane";"Clathrin-mediated endocytosis";"Inositol phosphate metabolism";"3-phosphoinositide degradation";"Phosphatidylinositol signaling system" CFLO015249-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" CFLO005667-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO000572-PA 27 Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-180746;Reactome: R-HSA-3301854;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-159236;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-168333;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-168271 "SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Nuclear import of Rev protein";"Nuclear Pore Complex (NPC) Disassembly";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"snRNP Assembly";"HCMV Late Events";"Transcriptional regulation by small RNAs";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus" CFLO002072-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO014444-PA 1 Reactome: R-HSA-418990 "Adherens junctions interactions" CFLO008165-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO016640-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO008219-PA 4 Reactome: R-HSA-72187;Reactome: R-HSA-77595;Reactome: R-HSA-73856;Reactome: R-HSA-72163 "mRNA 3'-end processing";"Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Major Pathway" CFLO012590-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO008920-PA 3 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213;Reactome: R-HSA-4420097 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs";"VEGFA-VEGFR2 Pathway" CFLO007174-PA 9 Reactome: R-HSA-5656121;Reactome: R-HSA-5696400;Reactome: R-HSA-5655862;Reactome: R-HSA-110312;Reactome: R-HSA-6782135;Reactome: R-HSA-5656169;Reactome: R-HSA-6782210;Reactome: R-HSA-5685942;Reactome: R-HSA-5696397 "Translesion synthesis by POLI";"Dual Incision in GG-NER";"Translesion synthesis by POLK";"Translesion synthesis by REV1";"Dual incision in TC-NER";"Termination of translesion DNA synthesis";"Gap-filling DNA repair synthesis and ligation in TC-NER";"HDR through Homologous Recombination (HRR)";"Gap-filling DNA repair synthesis and ligation in GG-NER" CFLO006702-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO014181-PA 2 Reactome: R-HSA-1296072;Reactome: R-HSA-5576894 "Voltage gated Potassium channels";"Phase 1 - inactivation of fast Na+ channels" CFLO005167-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO001664-PA 3 KEGG: 00860+1.3.3.3;Reactome: R-HSA-189451;MetaCyc: PWY-7159 "Porphyrin and chlorophyll metabolism";"Heme biosynthesis";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)" CFLO003259-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO001224-PA 1 Reactome: R-HSA-426486 "Small interfering RNA (siRNA) biogenesis" CFLO004939-PA 3 MetaCyc: PWY-7807;MetaCyc: PWY-7805;KEGG: 00190+3.6.1.1 "Glyphosate degradation III";"(aminomethyl)phosphonate degradation";"Oxidative phosphorylation" CFLO010512-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" CFLO014704-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO000497-PA 1 KEGG: 00970+6.1.1.20 "Aminoacyl-tRNA biosynthesis" CFLO000387-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" CFLO013635-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO016103-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO011996-PA 5 Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556;Reactome: R-HSA-983712 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes";"Ion channel transport" CFLO017559-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO015032-PA 2 KEGG: 00900+2.1.1.100;Reactome: R-HSA-163841 "Terpenoid backbone biosynthesis";"Gamma carboxylation, hypusine formation and arylsulfatase activation" CFLO015398-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO006168-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO008606-PA 4 KEGG: 00030+1.1.1.49;MetaCyc: PWY-7268;KEGG: 00480+1.1.1.49;MetaCyc: PWY-8004 "Pentose phosphate pathway";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Glutathione metabolism";"Entner-Doudoroff pathway I" CFLO012190-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO010681-PA 2 Reactome: R-HSA-6804758;Reactome: R-HSA-3214847 "Regulation of TP53 Activity through Acetylation";"HATs acetylate histones" CFLO018031-PA 7 Reactome: R-HSA-5362798;Reactome: R-HSA-5632684;Reactome: R-HSA-5632681;Reactome: R-HSA-5635838;Reactome: R-HSA-373080;Reactome: R-HSA-5358346;Reactome: R-HSA-5658034 "Release of Hh-Np from the secreting cell";"Hedgehog 'on' state";"Ligand-receptor interactions";"Activation of SMO";"Class B/2 (Secretin family receptors)";"Hedgehog ligand biogenesis";"HHAT G278V abrogates palmitoylation of Hh-Np" CFLO001443-PA 6 Reactome: R-HSA-429958;Reactome: R-HSA-450513;Reactome: R-HSA-6791226;Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-450604 "mRNA decay by 3' to 5' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"KSRP (KHSRP) binds and destabilizes mRNA" CFLO014210-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO018802-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO004758-PA 4 Reactome: R-HSA-674695;Reactome: R-HSA-75955;Reactome: R-HSA-8866654;Reactome: R-HSA-112382 "RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Elongation";"E3 ubiquitin ligases ubiquitinate target proteins";"Formation of RNA Pol II elongation complex" CFLO007113-PA 32 Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-168325;Reactome: R-HSA-75953;Reactome: R-HSA-8851708;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-73779;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-167172;Reactome: R-HSA-6807505;Reactome: R-HSA-72203;Reactome: R-HSA-72165;Reactome: R-HSA-6803529;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-167246;Reactome: R-HSA-75955;Reactome: R-HSA-167162;Reactome: R-HSA-9018519;Reactome: R-HSA-113418;Reactome: R-HSA-167287;Reactome: R-HSA-167243 "Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Viral Messenger RNA Synthesis";"RNA Polymerase II Transcription Initiation";"Signaling by FGFR2 IIIa TM";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"Transcription of the HIV genome";"RNA polymerase II transcribes snRNA genes";"Processing of Capped Intron-Containing Pre-mRNA";"mRNA Splicing - Minor Pathway";"FGFR2 alternative splicing";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II HIV Promoter Escape";"Estrogen-dependent gene expression";"Formation of the Early Elongation Complex";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery" CFLO016843-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO015160-PA 7 Reactome: R-HSA-1632852;Reactome: R-HSA-165159;Reactome: R-HSA-380972;Reactome: R-HSA-8943724;Reactome: R-HSA-9639288;Reactome: R-HSA-5628897;Reactome: R-HSA-166208 "Macroautophagy";"mTOR signalling";"Energy dependent regulation of mTOR by LKB1-AMPK";"Regulation of PTEN gene transcription";"Amino acids regulate mTORC1";"TP53 Regulates Metabolic Genes";"mTORC1-mediated signalling" CFLO000501-PA 1 Reactome: R-HSA-435368 "Zinc efflux and compartmentalization by the SLC30 family" CFLO001034-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO008061-PA 16 Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Translation initiation complex formation";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO009362-PA 1 Reactome: R-HSA-5368286 "Mitochondrial translation initiation" CFLO000970-PA 4 MetaCyc: PWY-7193;Reactome: R-HSA-73614;KEGG: 00983+2.7.1.48;KEGG: 00240+2.7.1.48 "Pyrimidine ribonucleosides salvage I";"Pyrimidine salvage";"Drug metabolism - other enzymes";"Pyrimidine metabolism" CFLO005525-PA 9 Reactome: R-HSA-1855204;MetaCyc: PWY-8052;MetaCyc: PWY-6351;MetaCyc: PWY-6367;Reactome: R-HSA-112043;KEGG: 04070+3.1.4.11;KEGG: 00562+3.1.4.11;Reactome: R-HSA-416476;MetaCyc: PWY-7039 "Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"D-myo-inositol-5-phosphate metabolism";"PLC beta mediated events";"Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"G alpha (q) signalling events";"Phosphatidate metabolism, as a signaling molecule" CFLO002580-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" CFLO001238-PA 8 Reactome: R-HSA-174430;Reactome: R-HSA-69166;Reactome: R-HSA-68962;Reactome: R-HSA-174411;Reactome: R-HSA-68952;Reactome: R-HSA-69183;Reactome: R-HSA-113501;Reactome: R-HSA-69091 "Telomere C-strand synthesis initiation";"Removal of the Flap Intermediate";"Activation of the pre-replicative complex";"Polymerase switching on the C-strand of the telomere";"DNA replication initiation";"Processive synthesis on the lagging strand";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Polymerase switching" CFLO009836-PA 2 Reactome: R-HSA-5576892;Reactome: R-HSA-445095 "Phase 0 - rapid depolarisation";"Interaction between L1 and Ankyrins" CFLO012612-PA 1 Reactome: R-HSA-1614635 "Sulfur amino acid metabolism" CFLO012124-PA 6 Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-9648025 "Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation" CFLO002882-PA 6 Reactome: R-HSA-6781827;Reactome: R-HSA-6781823;Reactome: R-HSA-6782135;Reactome: R-HSA-72163;MetaCyc: PWY-7511;Reactome: R-HSA-6782210 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of TC-NER Pre-Incision Complex";"Dual incision in TC-NER";"mRNA Splicing - Major Pathway";"Protein ubiquitination";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO002148-PA 2 KEGG: 00230+1.7.1.7;Reactome: R-HSA-74217 "Purine metabolism";"Purine salvage" CFLO012256-PA 5 Reactome: R-HSA-111463;Reactome: R-HSA-111464;Reactome: R-HSA-9627069;Reactome: R-HSA-111457;Reactome: R-HSA-111469 "SMAC (DIABLO) binds to IAPs";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"Regulation of the apoptosome activity";"Release of apoptotic factors from the mitochondria";"SMAC, XIAP-regulated apoptotic response" CFLO015140-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO007435-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO001519-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO009885-PA 4 MetaCyc: PWY-5188;KEGG: 00860+4.2.1.75;MetaCyc: PWY-5189;Reactome: R-HSA-189451 "Tetrapyrrole biosynthesis I (from glutamate)";"Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis II (from glycine)";"Heme biosynthesis" CFLO004026-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO012030-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-983168 "Neutrophil degranulation";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO001568-PA 57 Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553 "Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Neutrophil degranulation";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs" CFLO013725-PA 14 MetaCyc: PWY-7039;Reactome: R-HSA-418217;Reactome: R-HSA-416476;Reactome: R-HSA-4086398;Reactome: R-HSA-500657;KEGG: 00562+3.1.4.11;KEGG: 04070+3.1.4.11;Reactome: R-HSA-434316;Reactome: R-HSA-399997;Reactome: R-HSA-112043;MetaCyc: PWY-6367;MetaCyc: PWY-6351;Reactome: R-HSA-1855204;MetaCyc: PWY-8052 "Phosphatidate metabolism, as a signaling molecule";"G beta:gamma signalling through PLC beta";"G alpha (q) signalling events";"Ca2+ pathway";"Presynaptic function of Kainate receptors";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion";"Acetylcholine regulates insulin secretion";"PLC beta mediated events";"D-myo-inositol-5-phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis" CFLO008036-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" CFLO008773-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO002825-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO003028-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO005641-PA 5 Reactome: R-HSA-5610787;Reactome: R-HSA-5632684;Reactome: R-HSA-5610780;Reactome: R-HSA-5610785;Reactome: R-HSA-5610783 "Hedgehog 'off' state";"Hedgehog 'on' state";"Degradation of GLI1 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Degradation of GLI2 by the proteasome" CFLO016803-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" CFLO001491-PA 3 KEGG: 00460+3.5.1.1;KEGG: 00250+3.5.1.1;Reactome: R-HSA-8963693 "Cyanoamino acid metabolism";"Alanine, aspartate and glutamate metabolism";"Aspartate and asparagine metabolism" CFLO010441-PA 27 Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-5619107;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-168333;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-159236;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-180746;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-165054 "Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Nuclear import of Rev protein";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA" CFLO014354-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-400253 "Transcriptional activation of mitochondrial biogenesis";"Circadian Clock" CFLO004894-PA 2 Reactome: R-HSA-8949215;Reactome: R-HSA-5689880 "Mitochondrial calcium ion transport";"Ub-specific processing proteases" CFLO002938-PA 3 KEGG: 00350+3.7.1.2;KEGG: 00643+3.7.1.2;Reactome: R-HSA-8963684 "Tyrosine metabolism";"Styrene degradation";"Tyrosine catabolism" CFLO005537-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO001456-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-749476;Reactome: R-HSA-76061 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" CFLO000744-PA 16 Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72689 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Translation initiation complex formation";"Peptide chain elongation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits" CFLO006551-PA 1 Reactome: R-HSA-71336 "Pentose phosphate pathway" CFLO019335-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO005096-PA 13 Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-975956 "Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO000635-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO008516-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO005675-PA 5 KEGG: 04150+2.7.11.24;Reactome: R-HSA-376172;Reactome: R-HSA-171007;Reactome: R-HSA-168638;Reactome: R-HSA-4420097 "mTOR signaling pathway";"DSCAM interactions";"p38MAPK events";"NOD1/2 Signaling Pathway";"VEGFA-VEGFR2 Pathway" CFLO008198-PA 1 Reactome: R-HSA-72165 "mRNA Splicing - Minor Pathway" CFLO001001-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO000719-PA 5 KEGG: 00770+2.7.8.7;MetaCyc: PWY-6012;MetaCyc: PWY-6012-1;Reactome: R-HSA-199220;MetaCyc: PWY-6289 "Pantothenate and CoA biosynthesis";"Acyl carrier protein metabolism";"Acyl carrier protein activation";"Vitamin B5 (pantothenate) metabolism";"Petrobactin biosynthesis" CFLO002095-PA 56 Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323 "Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling" CFLO009588-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO004314-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO011797-PA 2 Reactome: R-HSA-4570571;Reactome: R-HSA-446193 "Defective RFT1 causes RFT1-CDG (CDG-1n)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO005855-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" CFLO005103-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO018015-PA 1 Reactome: R-HSA-6806664 "Metabolism of vitamin K" CFLO006196-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO004532-PA 3 Reactome: R-HSA-3359471;KEGG: 00860+2.5.1.17;Reactome: R-HSA-196741 "Defective MMAB causes methylmalonic aciduria type cblB";"Porphyrin and chlorophyll metabolism";"Cobalamin (Cbl, vitamin B12) transport and metabolism" CFLO016169-PA 9 MetaCyc: PWY-5789;KEGG: 00910+4.2.1.1;MetaCyc: PWY-241;MetaCyc: PWY-6142;MetaCyc: PWY-7117;MetaCyc: PWY-5744;MetaCyc: PWY-5743;MetaCyc: PWY-7115;Reactome: R-HSA-1475029 "3-hydroxypropanoate/4-hydroxybutanate cycle";"Nitrogen metabolism";"C4 photosynthetic carbon assimilation cycle, NADP-ME type";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Glyoxylate assimilation";"3-hydroxypropanoate cycle";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Reversible hydration of carbon dioxide" CFLO014200-PA 1 Reactome: R-HSA-68962 "Activation of the pre-replicative complex" CFLO016589-PA 3 Reactome: R-HSA-5696394;Reactome: R-HSA-5696395;Reactome: R-HSA-3108214 "DNA Damage Recognition in GG-NER";"Formation of Incision Complex in GG-NER";"SUMOylation of DNA damage response and repair proteins" CFLO008232-PA 1 Reactome: R-HSA-5663220 "RHO GTPases Activate Formins" CFLO002890-PA 1 Reactome: R-HSA-5617472 "Activation of anterior HOX genes in hindbrain development during early embryogenesis" CFLO010732-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-212436;Reactome: R-HSA-381340 "PPARA activates gene expression";"Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation" CFLO015674-PA 15 Reactome: R-HSA-5685938;Reactome: R-HSA-5693579;Reactome: R-HSA-5685942;Reactome: R-HSA-2559586;Reactome: R-HSA-5693568;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-5685939;Reactome: R-HSA-5693571;Reactome: R-HSA-5693548;Reactome: R-HSA-912446;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554 "HDR through Single Strand Annealing (SSA)";"Homologous DNA Pairing and Strand Exchange";"HDR through Homologous Recombination (HRR)";"DNA Damage/Telomere Stress Induced Senescence";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"HDR through MMEJ (alt-NHEJ)";"Nonhomologous End-Joining (NHEJ)";"Sensing of DNA Double Strand Breaks";"Meiotic recombination";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" CFLO000879-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO011897-PA 3 Reactome: R-HSA-1614558;Reactome: R-HSA-1614603;Reactome: R-HSA-2408508 "Degradation of cysteine and homocysteine";"Cysteine formation from homocysteine";"Metabolism of ingested SeMet, Sec, MeSec into H2Se" CFLO003025-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" CFLO000368-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO005915-PA 16 MetaCyc: PWY-5392;Reactome: R-HSA-71403;KEGG: 00020+6.2.1.4;KEGG: 00640+6.2.1.4;KEGG: 00720+6.2.1.5;MetaCyc: PWY-7384;KEGG: 00640+6.2.1.5;KEGG: 00660+6.2.1.5;MetaCyc: PWY-5749;MetaCyc: PWY-5538;MetaCyc: PWY-6728;KEGG: 00020+6.2.1.5;MetaCyc: PWY-5913;MetaCyc: PWY-5690;MetaCyc: PWY-6969;MetaCyc: PWY-5537 "Reductive TCA cycle II";"Citric acid cycle (TCA cycle)";"Citrate cycle (TCA cycle)";"Propanoate metabolism";"Carbon fixation pathways in prokaryotes";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Propanoate metabolism";"C5-Branched dibasic acid metabolism";"Itaconate degradation";"Pyruvate fermentation to acetate VI";"Methylaspartate cycle";"Citrate cycle (TCA cycle)";"Partial TCA cycle (obligate autotrophs)";"TCA cycle II (plants and fungi)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Pyruvate fermentation to acetate V" CFLO008869-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" CFLO006242-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO015814-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO002077-PA 9 Reactome: R-HSA-69017;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-1362277;Reactome: R-HSA-69205;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-68689;Reactome: R-HSA-68949 "CDK-mediated phosphorylation and removal of Cdc6";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Transcription of E2F targets under negative control by DREAM complex";"G1/S-Specific Transcription";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"CDC6 association with the ORC:origin complex";"Orc1 removal from chromatin" CFLO014120-PA 2 Reactome: R-HSA-8866423;Reactome: R-HSA-8963888 "VLDL assembly";"Chylomicron assembly" CFLO004176-PA 13 Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO005912-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO008857-PA 1 KEGG: 00970+6.1.1.19 "Aminoacyl-tRNA biosynthesis" CFLO009467-PA 3 Reactome: R-HSA-5423646;Reactome: R-HSA-2142691;MetaCyc: PWY-7533 "Aflatoxin activation and detoxification";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis" CFLO018815-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" CFLO015654-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO006247-PA 33 Reactome: R-HSA-73779;Reactome: R-HSA-73762;Reactome: R-HSA-6796648;Reactome: R-HSA-6781823;Reactome: R-HSA-112382;Reactome: R-HSA-167152;Reactome: R-HSA-69231;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-69202;Reactome: R-HSA-6782210;Reactome: R-HSA-8939236;Reactome: R-HSA-69273;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-167172;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-113418;Reactome: R-HSA-5696395;Reactome: R-HSA-69656;Reactome: R-HSA-167162;Reactome: R-HSA-427413;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-75955 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase I Transcription Initiation";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of TC-NER Pre-Incision Complex";"Formation of RNA Pol II elongation complex";"Formation of HIV elongation complex in the absence of HIV Tat";"Cyclin D associated events in G1";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Cyclin E associated events during G1/S transition";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cyclin A/B1/B2 associated events during G2/M transition";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Transcription of the HIV genome";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Formation of the Early Elongation Complex";"Formation of Incision Complex in GG-NER";"Cyclin A:Cdk2-associated events at S phase entry";"RNA Polymerase II HIV Promoter Escape";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"RNA Polymerase II Transcription Elongation" CFLO015852-PA 3 Reactome: R-HSA-450385;Reactome: R-HSA-450513;Reactome: R-HSA-430039 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 5' to 3' exoribonuclease" CFLO005853-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" CFLO013459-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695 "Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex" CFLO000937-PA 3 Reactome: R-HSA-6782135;Reactome: R-HSA-5696395;Reactome: R-HSA-5696400 "Dual incision in TC-NER";"Formation of Incision Complex in GG-NER";"Dual Incision in GG-NER" CFLO007170-PA 8 MetaCyc: PWY-8086;KEGG: 00270+1.1.1.27;MetaCyc: PWY-5481;Reactome: R-HSA-70268;KEGG: 00640+1.1.1.27;MetaCyc: PWY-6901;KEGG: 00010+1.1.1.27;KEGG: 00620+1.1.1.27 "(S)-lactate fermentation to propanoate, acetate and hydrogen";"Cysteine and methionine metabolism";"Pyruvate fermentation to (S)-lactate";"Pyruvate metabolism";"Propanoate metabolism";"Superpathway of glucose and xylose degradation";"Glycolysis / Gluconeogenesis";"Pyruvate metabolism" CFLO004169-PA 19 MetaCyc: PWY-5172;KEGG: 00660+6.2.1.5;MetaCyc: PWY-6728;MetaCyc: PWY-5538;MetaCyc: PWY-5690;MetaCyc: PWY-5913;KEGG: 00020+6.2.1.5;MetaCyc: PWY-5537;MetaCyc: PWY-6969;MetaCyc: PWY-5392;Reactome: R-HSA-71403;Reactome: R-HSA-163765;Reactome: R-HSA-6798695;MetaCyc: PWY-7384;KEGG: 00720+6.2.1.5;Reactome: R-HSA-75105;KEGG: 00720+2.3.3.8;KEGG: 00640+6.2.1.5;KEGG: 00020+2.3.3.8 "Acetyl-coa biosynthesis III (from citrate)";"C5-Branched dibasic acid metabolism";"Methylaspartate cycle";"Pyruvate fermentation to acetate VI";"TCA cycle II (plants and fungi)";"Partial TCA cycle (obligate autotrophs)";"Citrate cycle (TCA cycle)";"Pyruvate fermentation to acetate V";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Reductive TCA cycle II";"Citric acid cycle (TCA cycle)";"ChREBP activates metabolic gene expression";"Neutrophil degranulation";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Carbon fixation pathways in prokaryotes";"Fatty acyl-CoA biosynthesis";"Carbon fixation pathways in prokaryotes";"Propanoate metabolism";"Citrate cycle (TCA cycle)" CFLO005088-PA 10 MetaCyc: PWY-7199;MetaCyc: PWY-7184;MetaCyc: PWY-7210;Reactome: R-HSA-499943;MetaCyc: PWY-3841;KEGG: 00670+2.1.1.45;KEGG: 00240+2.1.1.45;Reactome: R-HSA-69205;MetaCyc: PWY-7198;MetaCyc: PWY-7187 "Pyrimidine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Interconversion of nucleotide di- and triphosphates";"Folate transformations II (plants)";"One carbon pool by folate";"Pyrimidine metabolism";"G1/S-Specific Transcription";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II" CFLO006719-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO013504-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-1663150 "Glycosphingolipid metabolism";"The activation of arylsulfatases" CFLO013740-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO010318-PA 13 Reactome: R-HSA-4420097;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-416572;KEGG: 04714+2.7.11.1;Reactome: R-HSA-416482;KEGG: 05170+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-5627117;KEGG: 05165+2.7.11.1;Reactome: R-HSA-3928663;KEGG: 05163+2.7.11.1;Reactome: R-HSA-3928662 "VEGFA-VEGFR2 Pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Sema4D induced cell migration and growth-cone collapse";"Thermogenesis";"G alpha (12/13) signalling events";"Human immunodeficiency virus 1 infection";"PI3K-Akt signaling pathway";"RHO GTPases Activate ROCKs";"Human papillomavirus infection";"EPHA-mediated growth cone collapse";"Human cytomegalovirus infection";"EPHB-mediated forward signaling" CFLO015169-PA 9 Reactome: R-HSA-73779;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-6804756;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-167172 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"Regulation of TP53 Activity through Phosphorylation";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome" CFLO008568-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO010558-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO005334-PA 18 Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-166208;Reactome: R-HSA-192823;Reactome: R-HSA-6790901;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957 "L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"mTORC1-mediated signalling";"Viral mRNA Translation";"rRNA modification in the nucleus and cytosol";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Peptide chain elongation";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO017976-PA 14 MetaCyc: PWY-7409;MetaCyc: PWY-7783;KEGG: 00590+3.1.1.4;KEGG: 00564+3.1.1.4+3.1.1.5;MetaCyc: PWY-8053;MetaCyc: PWY-7416;MetaCyc: PWY-8051;MetaCyc: PWY-6803;Reactome: R-HSA-975634;Reactome: R-HSA-1482788;KEGG: 00592+3.1.1.4;KEGG: 00591+3.1.1.4;MetaCyc: PWY-7417;KEGG: 00565+3.1.1.4 "Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Plasmalogen degradation";"Arachidonic acid metabolism";"Glycerophospholipid metabolism";"Anandamide biosynthesis II";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Anandamide biosynthesis I";"Phosphatidylcholine acyl editing";"Retinoid metabolism and transport";"Acyl chain remodelling of PC";"alpha-Linolenic acid metabolism";"Linoleic acid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Ether lipid metabolism" CFLO008981-PA 7 KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1 "PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection" CFLO003984-PA 6 Reactome: R-HSA-2206292;Reactome: R-HSA-2160916;Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.25;Reactome: R-HSA-6798695;Reactome: R-HSA-2024096 "MPS VII - Sly syndrome";"Hyaluronan uptake and degradation";"Lysosomal oligosaccharide catabolism";"Other glycan degradation";"Neutrophil degranulation";"HS-GAG degradation" CFLO016449-PA 3 Reactome: R-HSA-6794361;Reactome: R-HSA-264870;Reactome: R-HSA-6798695 "Neurexins and neuroligins";"Caspase-mediated cleavage of cytoskeletal proteins";"Neutrophil degranulation" CFLO018059-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO018003-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO016959-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO005818-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" CFLO003083-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane" CFLO012032-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO008870-PA 7 KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1 "Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Human papillomavirus infection";"Thermogenesis" CFLO016115-PA 2 KEGG: 00230+3.5.3.4;MetaCyc: PWY-5697 "Purine metabolism";"Allantoin degradation to ureidoglycolate I (urea producing)" CFLO016842-PA 6 Reactome: R-HSA-8862803;Reactome: R-HSA-2151201;Reactome: R-HSA-3299685;MetaCyc: PWY-6854;Reactome: R-HSA-9615017;Reactome: R-HSA-8950505 "Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models";"Transcriptional activation of mitochondrial biogenesis";"Detoxification of Reactive Oxygen Species";"Ethylene biosynthesis III (microbes)";"FOXO-mediated transcription of oxidative stress, metabolic and neuronal genes";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" CFLO006373-PA 1 KEGG: 04070+2.7.11.13 "Phosphatidylinositol signaling system" CFLO014006-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO000953-PA 56 Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-180534;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258 "Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Vpu mediated degradation of CD4";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL" CFLO013496-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" CFLO004165-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO000027-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-1268020 "Cristae formation";"Mitochondrial protein import" CFLO018730-PA 4 MetaCyc: PWY-7375;Reactome: R-HSA-167160;Reactome: R-HSA-72086;Reactome: R-HSA-77075 "Mrna capping I";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE" CFLO009826-PA 2 KEGG: 00561+2.7.1.30;MetaCyc: PWY-4261 "Glycerolipid metabolism";"Glycerol degradation I" CFLO013827-PA 7 KEGG: 00250+4.3.2.2;KEGG: 00230+4.3.2.2;MetaCyc: PWY-7219;Reactome: R-HSA-73817;MetaCyc: PWY-6123;MetaCyc: PWY-7234;MetaCyc: PWY-6124 "Alanine, aspartate and glutamate metabolism";"Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis";"Purine ribonucleoside monophosphate biosynthesis";"Inosine-5'-phosphate biosynthesis I";"Inosine-5'-phosphate biosynthesis III";"Inosine-5'-phosphate biosynthesis II" CFLO006046-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO018724-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO016942-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO012369-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO009635-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" CFLO016402-PA 3 Reactome: R-HSA-2514859;MetaCyc: PWY-7799;MetaCyc: PWY-7800 "Inactivation, recovery and regulation of the phototransduction cascade";"Arg/N-end rule pathway (eukaryotic)";"Ac/N-end rule pathway" CFLO000629-PA 16 Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Peptide chain elongation";"Translation initiation complex formation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO013785-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO007006-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO004877-PA 4 Reactome: R-HSA-69205;Reactome: R-HSA-176974;Reactome: R-HSA-176187;Reactome: R-HSA-68962 "G1/S-Specific Transcription";"Unwinding of DNA";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex" CFLO002010-PA 4 Reactome: R-HSA-1170546;Reactome: R-HSA-982772;Reactome: R-HSA-983231;Reactome: R-HSA-2586552 "Prolactin receptor signaling";"Growth hormone receptor signaling";"Factors involved in megakaryocyte development and platelet production";"Signaling by Leptin" CFLO008807-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO007032-PA 2 KEGG: 00970+6.1.1.3;Reactome: R-HSA-114608 "Aminoacyl-tRNA biosynthesis";"Platelet degranulation" CFLO001113-PA 1 Reactome: R-HSA-977443 "GABA receptor activation" CFLO019855-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO010039-PA 11 Reactome: R-HSA-432142;Reactome: R-HSA-388841;Reactome: R-HSA-912694;Reactome: R-HSA-391160;Reactome: R-HSA-9008059;Reactome: R-HSA-877312;Reactome: R-HSA-512988;Reactome: R-HSA-909733;Reactome: R-HSA-389948;Reactome: R-HSA-210990;Reactome: R-HSA-114604 "Platelet sensitization by LDL";"Costimulation by the CD28 family";"Regulation of IFNA signaling";"Signal regulatory protein family interactions";"Interleukin-37 signaling";"Regulation of IFNG signaling";"Interleukin-3, Interleukin-5 and GM-CSF signaling";"Interferon alpha/beta signaling";"PD-1 signaling";"PECAM1 interactions";"GPVI-mediated activation cascade" CFLO015635-PA 2 Reactome: R-HSA-1369062;Reactome: R-HSA-9603798 "ABC transporters in lipid homeostasis";"Class I peroxisomal membrane protein import" CFLO012712-PA 2 Reactome: R-HSA-181429;Reactome: R-HSA-212676 "Serotonin Neurotransmitter Release Cycle";"Dopamine Neurotransmitter Release Cycle" CFLO002574-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO003342-PA 2 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines" CFLO002678-PA 56 Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424 "Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling" CFLO002963-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO015626-PA 1 Reactome: R-HSA-446199 "Synthesis of Dolichyl-phosphate" CFLO010508-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO008960-PA 1 Reactome: R-HSA-381753 "Olfactory Signaling Pathway" CFLO006892-PA 5 KEGG: 00564+1.1.1.94;Reactome: R-HSA-1483166;MetaCyc: PWY-5981;MetaCyc: PWY-7902;MetaCyc: PWY-5667 "Glycerophospholipid metabolism";"Synthesis of PA";"CDP-diacylglycerol biosynthesis III";"Glucosylglycerol biosynthesis";"CDP-diacylglycerol biosynthesis I" CFLO012319-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-141444 "EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" CFLO018536-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO014412-PA 2 Reactome: R-HSA-975577;Reactome: R-HSA-2022854 "N-Glycan antennae elongation";"Keratan sulfate biosynthesis" CFLO001804-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO008806-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO008121-PA 20 Reactome: R-HSA-5685942;Reactome: R-HSA-5685938;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-69473;Reactome: R-HSA-5696400;Reactome: R-HSA-5693616;Reactome: R-HSA-110312;Reactome: R-HSA-5651801;Reactome: R-HSA-5656121;Reactome: R-HSA-69091;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-5696397;Reactome: R-HSA-5656169;Reactome: R-HSA-174411;Reactome: R-HSA-5655862;Reactome: R-HSA-6804756;Reactome: R-HSA-5693607;Reactome: R-HSA-110320 "HDR through Homologous Recombination (HRR)";"HDR through Single Strand Annealing (SSA)";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"G2/M DNA damage checkpoint";"Dual Incision in GG-NER";"Presynaptic phase of homologous DNA pairing and strand exchange";"Translesion synthesis by REV1";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLI";"Polymerase switching";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Termination of translesion DNA synthesis";"Polymerase switching on the C-strand of the telomere";"Translesion synthesis by POLK";"Regulation of TP53 Activity through Phosphorylation";"Processing of DNA double-strand break ends";"Translesion Synthesis by POLH" CFLO008335-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557 "Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis" CFLO004356-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO012334-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO017029-PA 3 MetaCyc: PWY-7980;KEGG: 00195+7.1.2.2;KEGG: 00190+7.1.2.2 "ATP biosynthesis";"Photosynthesis";"Oxidative phosphorylation" CFLO003320-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-975956;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-2408557 "Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Selenocysteine synthesis" CFLO016440-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO007190-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-1268020 "Citric acid cycle (TCA cycle)";"Mitochondrial protein import" CFLO011961-PA 2 Reactome: R-HSA-6804756;Reactome: R-HSA-8854518 "Regulation of TP53 Activity through Phosphorylation";"AURKA Activation by TPX2" CFLO009565-PA 3 MetaCyc: PWY-7892;Reactome: R-HSA-6787450;MetaCyc: PWY-7887 "Trna-uridine 2-thiolation and selenation (bacteria)";"tRNA modification in the mitochondrion";"Protein SAMPylation and SAMP-mediated thiolation" CFLO004978-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO002012-PA 31 MetaCyc: PWY-7663;MetaCyc: PWY-6282;MetaCyc: PWY-7858;Reactome: R-HSA-9029558;MetaCyc: PWY-5971;MetaCyc: PWYG-321;Reactome: R-HSA-199220;MetaCyc: PWY-5142;MetaCyc: PWY-5966-1;MetaCyc: PWY-6113;MetaCyc: PWY-5147;MetaCyc: PWY-8049;MetaCyc: PWY-7664;Reactome: R-HSA-2426168;MetaCyc: PWY-5367;MetaCyc: PWY-5366;MetaCyc: PWY-8047;Reactome: R-HSA-163765;MetaCyc: PWY-4381;MetaCyc: PWY-7388;MetaCyc: PWY-7746;MetaCyc: PWY-8012;Reactome: R-HSA-75105;MetaCyc: PWY-5973;KEGG: 00061+1.1.1.100+2.3.1.85+4.2.1.59+2.3.1.39+2.3.1.41+3.1.2.14;MetaCyc: PWY-5989;KEGG: 00780+1.1.1.100+4.2.1.59+2.3.1.41;MetaCyc: PWY-6519;MetaCyc: PWY-7723;MetaCyc: PWY-6799;MetaCyc: PWY-5994 "Gondoate biosynthesis (anaerobic)";"Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)";"(5Z)-dodecenoate biosynthesis II";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Palmitate biosynthesis II (bacteria and plant cytoplasm)";"";"Vitamin B5 (pantothenate) metabolism";"Acyl-[acyl-carrier protein] thioesterase pathway";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"Superpathway of mycolate biosynthesis";"Oleate biosynthesis I (plants)";"Pederin biosynthesis";"Oleate biosynthesis IV (anaerobic)";"Activation of gene expression by SREBF (SREBP)";"Petroselinate biosynthesis";"Palmitoleate biosynthesis II (plants and bacteria)";"Bryostatin biosynthesis";"ChREBP activates metabolic gene expression";"Fatty acid biosynthesis initiation (bacteria and plants)";"Octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)";"Mycobacterial sulfolipid biosynthesis";"Mupirocin biosynthesis";"Fatty acyl-CoA biosynthesis";"Cis-vaccenate biosynthesis";"Fatty acid biosynthesis";"Stearate biosynthesis II (bacteria and plants)";"Biotin metabolism";"8-amino-7-oxononanoate biosynthesis I";"Bacterial bioluminescence";"Fatty acid biosynthesis initiation (plant mitochondria)";"Palmitate biosynthesis (animals and fungi, cytoplasm)" CFLO010339-PA 1 Reactome: R-HSA-425381 "Bicarbonate transporters" CFLO011136-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6811440;Reactome: R-HSA-6807878 "Intra-Golgi traffic";"Retrograde transport at the Trans-Golgi-Network";"COPI-mediated anterograde transport" CFLO004212-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO004424-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO008786-PA 5 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276;Reactome: R-HSA-5223345;Reactome: R-HSA-425393 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination";"Miscellaneous transport and binding events";"Transport of inorganic cations/anions and amino acids/oligopeptides" CFLO004050-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO005383-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO005873-PA 4 Reactome: R-HSA-8874211;Reactome: R-HSA-1655829;Reactome: R-HSA-381033;Reactome: R-HSA-8963889 "CREB3 factors activate genes";"Regulation of cholesterol biosynthesis by SREBP (SREBF)";"ATF6 (ATF6-alpha) activates chaperones";"Assembly of active LPL and LIPC lipase complexes" CFLO013369-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO008855-PA 2 Reactome: R-HSA-8856825;Reactome: R-HSA-8856828 "Cargo recognition for clathrin-mediated endocytosis";"Clathrin-mediated endocytosis" CFLO001271-PA 10 MetaCyc: PWY-6613;MetaCyc: PWY-1722;Reactome: R-HSA-196757;MetaCyc: PWY-5030;MetaCyc: PWY-5497;MetaCyc: PWY-2201;KEGG: 00720+1.5.1.5+3.5.4.9;MetaCyc: PWY-3841;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-7909 "Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Formate assimilation into 5,10-methylenetetrahydrofolate";"Metabolism of folate and pterines";"L-histidine degradation III";"Purine nucleobases degradation II (anaerobic)";"Folate transformations I";"Carbon fixation pathways in prokaryotes";"Folate transformations II (plants)";"One carbon pool by folate";"Formaldehyde oxidation VII (THF pathway)" CFLO000911-PA 1 Reactome: R-HSA-5689877 "Josephin domain DUBs" CFLO011545-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO001247-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO009579-PA 1 Reactome: R-HSA-1237044 "Erythrocytes take up carbon dioxide and release oxygen" CFLO008720-PA 6 KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782;MetaCyc: PWY-6733;MetaCyc: PWY-5884;MetaCyc: PWY-7656;Reactome: R-HSA-9640463 "Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Wax biosynthesis" CFLO014105-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO006504-PA 1 Reactome: R-HSA-390648 "Muscarinic acetylcholine receptors" CFLO016536-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO014183-PA 2 Reactome: R-HSA-5576894;Reactome: R-HSA-1296072 "Phase 1 - inactivation of fast Na+ channels";"Voltage gated Potassium channels" CFLO004991-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO019071-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO002728-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" CFLO009893-PA 4 Reactome: R-HSA-379716;KEGG: 00970+6.1.1.11;Reactome: R-HSA-2408557;MetaCyc: PWY-6281 "Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis";"Selenocysteine synthesis";"L-selenocysteine biosynthesis II (archaea and eukaryotes)" CFLO005971-PA 4 Reactome: R-HSA-4719360;Reactome: R-HSA-4719377;Reactome: R-HSA-4717374;Reactome: R-HSA-162699 "Defective DPM3 causes DPM3-CDG (CDG-1o)";"Defective DPM2 causes DPM2-CDG (CDG-1u)";"Defective DPM1 causes DPM1-CDG (CDG-1e)";"Synthesis of dolichyl-phosphate mannose" CFLO006231-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" CFLO011437-PA 14 MetaCyc: PWY-7782;MetaCyc: PWY-7587;MetaCyc: PWY-7417;Reactome: R-HSA-1483166;MetaCyc: PWY-5667;MetaCyc: PWY-6453;MetaCyc: PWY-8055;MetaCyc: PWY-7589;MetaCyc: PWY-8053;MetaCyc: PWY-8051;MetaCyc: PWY-5981;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7411;KEGG: 00564+2.3.1.51 "Plasmalogen biosynthesis";"Oleate biosynthesis III (cyanobacteria)";"Phospholipid remodeling (phosphatidate, yeast)";"Synthesis of PA";"CDP-diacylglycerol biosynthesis I";"Stigma estolide biosynthesis";"Palmitoyl ethanolamide biosynthesis";"Palmitoleate biosynthesis III (cyanobacteria)";"Anandamide biosynthesis II";"Anandamide biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)";"Glycerophospholipid metabolism" CFLO002441-PA 3 Reactome: R-HSA-72163;Reactome: R-HSA-191859;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"snRNP Assembly";"mRNA Splicing - Minor Pathway" CFLO006790-PA 1 Reactome: R-HSA-419771 "Opsins" CFLO008918-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO001997-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO006992-PA 17 Reactome: R-HSA-141430;Reactome: R-HSA-8853884;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-176412;Reactome: R-HSA-174178;Reactome: R-HSA-179409;Reactome: R-HSA-983168;Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-8951664;Reactome: R-HSA-2559582;Reactome: R-HSA-174084;Reactome: R-HSA-174184;Reactome: R-HSA-174048;Reactome: R-HSA-176408;Reactome: R-HSA-69017 "Inactivation of APC/C via direct inhibition of the APC/C complex";"Transcriptional Regulation by VENTX";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"Phosphorylation of the APC/C";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A";"Antigen processing: Ubiquitination & Proteasome degradation";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Neddylation";"Senescence-Associated Secretory Phenotype (SASP)";"Autodegradation of Cdh1 by Cdh1:APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B";"Regulation of APC/C activators between G1/S and early anaphase";"CDK-mediated phosphorylation and removal of Cdc6" CFLO016469-PA 4 Reactome: R-HSA-189451;MetaCyc: PWY-5189;KEGG: 00860+2.5.1.61;MetaCyc: PWY-5188 "Heme biosynthesis";"Tetrapyrrole biosynthesis II (from glycine)";"Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis I (from glutamate)" CFLO002410-PA 2 KEGG: 00670+2.1.2.10;KEGG: 00260+2.1.2.10 "One carbon pool by folate";"Glycine, serine and threonine metabolism" CFLO014786-PA 2 KEGG: 00500+3.2.1.28;Reactome: R-HSA-189085 "Starch and sucrose metabolism";"Digestion of dietary carbohydrate" CFLO003043-PA 4 MetaCyc: PWY-8072;MetaCyc: PWY-7383;KEGG: 00473+5.1.1.1;MetaCyc: PWY-8040 "Alanine racemization";"Anaerobic energy metabolism (invertebrates, cytosol)";"D-Alanine metabolism";"Ansatrienin biosynthesis" CFLO005169-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO014480-PA 4 KEGG: 00053+1.13.99.1;Reactome: R-HSA-1855183;KEGG: 00562+1.13.99.1;MetaCyc: PWY-4841 "Ascorbate and aldarate metabolism";"Synthesis of IP2, IP, and Ins in the cytosol";"Inositol phosphate metabolism";"UDP-alpha-D-glucuronate biosynthesis (from myo-inositol)" CFLO013570-PA 1 Reactome: R-HSA-8856828 "Clathrin-mediated endocytosis" CFLO002027-PA 1 Reactome: R-HSA-418886 "Netrin mediated repulsion signals" CFLO017655-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO006324-PA 16 Reactome: R-HSA-8866427;Reactome: R-HSA-5140745;Reactome: R-HSA-2132295;Reactome: R-HSA-8856825;Reactome: R-HSA-177504;Reactome: R-HSA-5099900;Reactome: R-HSA-190873;Reactome: R-HSA-416993;Reactome: R-HSA-167590;Reactome: R-HSA-3928665;Reactome: R-HSA-164939;Reactome: R-HSA-8856828;Reactome: R-HSA-182218;Reactome: R-HSA-437239;Reactome: R-HSA-8964038;Reactome: R-HSA-196025 "VLDLR internalisation and degradation";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"MHC class II antigen presentation";"Cargo recognition for clathrin-mediated endocytosis";"Retrograde neurotrophin signalling";"WNT5A-dependent internalization of FZD4";"Gap junction degradation";"Trafficking of GluR2-containing AMPA receptors";"Nef Mediated CD4 Down-regulation";"EPH-ephrin mediated repulsion of cells";"Nef mediated downregulation of CD28 cell surface expression";"Clathrin-mediated endocytosis";"Nef Mediated CD8 Down-regulation";"Recycling pathway of L1";"LDL clearance";"Formation of annular gap junctions" CFLO008161-PA 1 Reactome: R-HSA-1445148 "Translocation of SLC2A4 (GLUT4) to the plasma membrane" CFLO012115-PA 2 KEGG: 00563+2.4.1.198;Reactome: R-HSA-162710 "Glycosylphosphatidylinositol (GPI)-anchor biosynthesis";"Synthesis of glycosylphosphatidylinositol (GPI)" CFLO005766-PA 2 Reactome: R-HSA-9610379;Reactome: R-HSA-917729 "HCMV Late Events";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO018371-PA 12 MetaCyc: PWY-5871;KEGG: 00130+2.1.1.222+2.1.1.64;MetaCyc: PWY-5855;MetaCyc: PWY-7230;Reactome: R-HSA-2142789;MetaCyc: PWY-5872;MetaCyc: PWY-5873;MetaCyc: PWY-7233;MetaCyc: PWY-5856;MetaCyc: PWY-6708;MetaCyc: PWY-5870;MetaCyc: PWY-5857 "Ubiquinol-9 biosynthesis (eukaryotic)";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)";"Ubiquinol biosynthesis";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol-6 bypass biosynthesis (eukaryotic)";"Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (prokaryotic)" CFLO009755-PA 1 Reactome: R-HSA-400253 "Circadian Clock" CFLO008104-PA 24 Reactome: R-HSA-1257604;Reactome: R-HSA-5218920;Reactome: R-HSA-389357;KEGG: 05170+2.7.11.1;Reactome: R-HSA-392451;Reactome: R-HSA-6804757;KEGG: 04926+2.7.11.1;Reactome: R-HSA-2871837;KEGG: 04714+2.7.11.1;Reactome: R-HSA-165158;Reactome: R-HSA-9634635;Reactome: R-HSA-202424;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-444257;Reactome: R-HSA-5674400;Reactome: R-HSA-354192;Reactome: R-HSA-5607764;KEGG: 04150+2.7.11.1;Reactome: R-HSA-5218921;Reactome: R-HSA-114604;Reactome: R-HSA-2730905;Reactome: R-HSA-5625740;KEGG: 05165+2.7.11.1 "PIP3 activates AKT signaling";"VEGFR2 mediated vascular permeability";"CD28 dependent PI3K/Akt signaling";"Human immunodeficiency virus 1 infection";"G beta:gamma signalling through PI3Kgamma";"Regulation of TP53 Degradation";"Relaxin signaling pathway";"FCERI mediated NF-kB activation";"Thermogenesis";"Activation of AKT2";"Estrogen-stimulated signaling through PRKCZ";"Downstream TCR signaling";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"RSK activation";"Constitutive Signaling by AKT1 E17K in Cancer";"Integrin signaling";"CLEC7A (Dectin-1) signaling";"mTOR signaling pathway";"VEGFR2 mediated cell proliferation";"GPVI-mediated activation cascade";"Role of LAT2/NTAL/LAB on calcium mobilization";"RHO GTPases activate PKNs";"Human papillomavirus infection" CFLO007131-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO013907-PA 6 Reactome: R-HSA-73856;Reactome: R-HSA-191859;Reactome: R-HSA-72165;Reactome: R-HSA-111367;Reactome: R-HSA-77588;Reactome: R-HSA-72163 "RNA Polymerase II Transcription Termination";"snRNP Assembly";"mRNA Splicing - Minor Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"mRNA Splicing - Major Pathway" CFLO008203-PA 13 MetaCyc: PWY-6370;MetaCyc: PWY-4061;MetaCyc: PWY-2261;Reactome: R-HSA-196836;KEGG: 00983+2.5.1.18;Reactome: R-HSA-156590;KEGG: 00982+2.5.1.18;KEGG: 00480+2.5.1.18+1.8.5.1;KEGG: 00053+1.8.5.1;MetaCyc: PWY-7533;KEGG: 00980+2.5.1.18;MetaCyc: PWY-6842;MetaCyc: PWY-7112 "Ascorbate recycling (cytosolic)";"Glutathione-mediated detoxification I";"Ascorbate glutathione cycle";"Vitamin C (ascorbate) metabolism";"Drug metabolism - other enzymes";"Glutathione conjugation";"Drug metabolism - cytochrome P450";"Glutathione metabolism";"Ascorbate and aldarate metabolism";"Gliotoxin biosynthesis";"Metabolism of xenobiotics by cytochrome P450";"Glutathione-mediated detoxification II";"4-hydroxy-2-nonenal detoxification" CFLO018399-PA 6 MetaCyc: PWY-7077;MetaCyc: PWY-7395;KEGG: 00052+3.5.1.25;Reactome: R-HSA-446210;KEGG: 00520+3.5.1.25;MetaCyc: PWY-6906 "N-acetyl-D-galactosamine degradation";"D-galactosamine and N-acetyl-D-galactosamine degradation";"Galactose metabolism";"Synthesis of UDP-N-acetyl-glucosamine";"Amino sugar and nucleotide sugar metabolism";"Chitin derivatives degradation" CFLO002682-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO001131-PA 3 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213;Reactome: R-HSA-4420097 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs";"VEGFA-VEGFR2 Pathway" CFLO019069-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO015268-PA 3 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination" CFLO001629-PA 42 Reactome: R-HSA-110330;Reactome: R-HSA-3214842;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-606279;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-73728;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638;Reactome: R-HSA-3214858;Reactome: R-HSA-1912408;Reactome: R-HSA-3214847;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214841;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-201722;Reactome: R-HSA-73772;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-2559586;Reactome: R-HSA-9018519;Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-9616222;Reactome: R-HSA-427359;Reactome: R-HSA-69473;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-2559580;Reactome: R-HSA-5625886;Reactome: R-HSA-110328 "Recognition and association of DNA glycosylase with site containing an affected purine";"HDMs demethylate histones";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Deposition of new CENPA-containing nucleosomes at the centromere";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"RNA Polymerase I Promoter Opening";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins";"RMTs methylate histone arginines";"Pre-NOTCH Transcription and Translation";"HATs acetylate histones";"Amyloid fiber formation";"Cleavage of the damaged purine";"PKMTs methylate histone lysines";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"Formation of the beta-catenin:TCF transactivating complex";"RNA Polymerase I Promoter Escape";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"DNA Damage/Telomere Stress Induced Senescence";"Estrogen-dependent gene expression";"HCMV Early Events";"Packaging Of Telomere Ends";"Transcriptional regulation of granulopoiesis";"SIRT1 negatively regulates rRNA expression";"G2/M DNA damage checkpoint";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Oxidative Stress Induced Senescence";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine" CFLO004394-PA 17 Reactome: R-HSA-6804756;Reactome: R-HSA-1221632;KEGG: 04150+2.7.11.1;Reactome: R-HSA-5693607;Reactome: R-HSA-6783310;KEGG: 05165+2.7.11.1;Reactome: R-HSA-5693616;KEGG: 05170+2.7.11.1;Reactome: R-HSA-69473;KEGG: 04926+2.7.11.1;Reactome: R-HSA-3371453;KEGG: 04714+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-176187;Reactome: R-HSA-5685938;Reactome: R-HSA-6796648 "Regulation of TP53 Activity through Phosphorylation";"Meiotic synapsis";"mTOR signaling pathway";"Processing of DNA double-strand break ends";"Fanconi Anemia Pathway";"Human papillomavirus infection";"Presynaptic phase of homologous DNA pairing and strand exchange";"Human immunodeficiency virus 1 infection";"G2/M DNA damage checkpoint";"Relaxin signaling pathway";"Regulation of HSF1-mediated heat shock response";"Thermogenesis";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Activation of ATR in response to replication stress";"HDR through Single Strand Annealing (SSA)";"TP53 Regulates Transcription of DNA Repair Genes" CFLO010319-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO002652-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" CFLO016792-PA 4 Reactome: R-HSA-6807505;KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "RNA polymerase II transcribes snRNA genes";"Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO005130-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" CFLO006229-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO007303-PA 3 Reactome: R-HSA-1483191;Reactome: R-HSA-112311;Reactome: R-HSA-422085 "Synthesis of PC";"Neurotransmitter clearance";"Synthesis, secretion, and deacylation of Ghrelin" CFLO001581-PA 5 Reactome: R-HSA-389661;KEGG: 00380+1.2.4.2;MetaCyc: PWY-5084;KEGG: 00310+1.2.4.2;KEGG: 00020+1.2.4.2 "Glyoxylate metabolism and glycine degradation";"Tryptophan metabolism";"2-oxoglutarate decarboxylation to succinyl-CoA";"Lysine degradation";"Citrate cycle (TCA cycle)" CFLO004889-PA 3 Reactome: R-HSA-159740;MetaCyc: PWY-7999;KEGG: 00130+4.1.1.90 "Gamma-carboxylation of protein precursors";"Vitamin K-epoxide cycle";"Ubiquinone and other terpenoid-quinone biosynthesis" CFLO007399-PA 29 Reactome: R-HSA-112382;Reactome: R-HSA-6782135;Reactome: R-HSA-167246;Reactome: R-HSA-6781823;Reactome: R-HSA-6796648;Reactome: R-HSA-73779;Reactome: R-HSA-73762;Reactome: R-HSA-167152;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-167160;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-5696400;Reactome: R-HSA-113418;Reactome: R-HSA-5696395;Reactome: R-HSA-6782210;Reactome: R-HSA-167162;Reactome: R-HSA-75955;Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-167172;Reactome: R-HSA-167158;Reactome: R-HSA-427413;Reactome: R-HSA-73776 "Formation of RNA Pol II elongation complex";"Dual incision in TC-NER";"Tat-mediated elongation of the HIV-1 transcript";"Formation of TC-NER Pre-Incision Complex";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase I Transcription Initiation";"Formation of HIV elongation complex in the absence of HIV Tat";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Dual Incision in GG-NER";"Formation of the Early Elongation Complex";"Formation of Incision Complex in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"Transcription of the HIV genome";"Formation of the HIV-1 Early Elongation Complex";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Promoter Escape" CFLO019061-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO016472-PA 2 Reactome: R-HSA-2173788;Reactome: R-HSA-5689603 "Downregulation of TGF-beta receptor signaling";"UCH proteinases" CFLO004070-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO007156-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" CFLO004744-PA 5 Reactome: R-HSA-112382;Reactome: R-HSA-201722;Reactome: R-HSA-75955;Reactome: R-HSA-8866654;Reactome: R-HSA-674695 "Formation of RNA Pol II elongation complex";"Formation of the beta-catenin:TCF transactivating complex";"RNA Polymerase II Transcription Elongation";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Pre-transcription Events" CFLO019072-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" CFLO012570-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO000698-PA 5 Reactome: R-HSA-3108214;Reactome: R-HSA-110328;Reactome: R-HSA-110329;Reactome: R-HSA-110357;Reactome: R-HSA-5221030 "SUMOylation of DNA damage response and repair proteins";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Cleavage of the damaged pyrimidine";"Displacement of DNA glycosylase by APEX1";"TET1,2,3 and TDG demethylate DNA" CFLO016899-PA 2 KEGG: 00380+1.13.11.11;Reactome: R-HSA-71240 "Tryptophan metabolism";"Tryptophan catabolism" CFLO001118-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" CFLO002172-PA 3 Reactome: R-HSA-8874081;Reactome: R-HSA-3000171;Reactome: R-HSA-3000157 "MET activates PTK2 signaling";"Non-integrin membrane-ECM interactions";"Laminin interactions" CFLO006318-PA 6 MetaCyc: PWY-7761;KEGG: 00760+6.3.1.5;Reactome: R-HSA-196807;MetaCyc: PWY-5653;MetaCyc: PWY-5381;KEGG: 00760+6.3.5.1 "NAD salvage pathway II (PNC IV cycle)";"Nicotinate and nicotinamide metabolism";"Nicotinate metabolism";"NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde";"Pyridine nucleotide cycling (plants)";"Nicotinate and nicotinamide metabolism" CFLO001666-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO011434-PA 14 MetaCyc: PWY-8055;MetaCyc: PWY-5667;MetaCyc: PWY-6453;MetaCyc: PWY-7782;MetaCyc: PWY-7587;Reactome: R-HSA-1483166;MetaCyc: PWY-7417;KEGG: 00564+2.3.1.51;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7411;MetaCyc: PWY-7589;MetaCyc: PWY-8053;MetaCyc: PWY-8051;MetaCyc: PWY-5981 "Palmitoyl ethanolamide biosynthesis";"CDP-diacylglycerol biosynthesis I";"Stigma estolide biosynthesis";"Plasmalogen biosynthesis";"Oleate biosynthesis III (cyanobacteria)";"Synthesis of PA";"Phospholipid remodeling (phosphatidate, yeast)";"Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)";"Palmitoleate biosynthesis III (cyanobacteria)";"Anandamide biosynthesis II";"Anandamide biosynthesis I";"CDP-diacylglycerol biosynthesis III" CFLO002660-PA 2 Reactome: R-HSA-9010553;Reactome: R-HSA-975957 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO007128-PA 5 Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-427413;Reactome: R-HSA-5250924;Reactome: R-HSA-73762 "RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Transcription Initiation" CFLO007207-PA 58 Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;KEGG: 00563+2.4.1.198;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-162710;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562 "Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Glycosylphosphatidylinositol (GPI)-anchor biosynthesis";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Synthesis of glycosylphosphatidylinositol (GPI)";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)" CFLO012240-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827 "Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO012235-PA 10 Reactome: R-HSA-202424;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-8951664;Reactome: R-HSA-1169091;Reactome: R-HSA-5607764;Reactome: R-HSA-5607761;Reactome: R-HSA-2565942;Reactome: R-HSA-2871837;Reactome: R-HSA-5684264 "Downstream TCR signaling";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation";"Activation of NF-kappaB in B cells";"CLEC7A (Dectin-1) signaling";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of PLK1 Activity at G2/M Transition";"FCERI mediated NF-kB activation";"MAP3K8 (TPL2)-dependent MAPK1/3 activation" CFLO014414-PA 2 Reactome: R-HSA-9033241;Reactome: R-HSA-8866654 "Peroxisomal protein import";"E3 ubiquitin ligases ubiquitinate target proteins" CFLO003059-PA 56 Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-180534;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442 "RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Vpu mediated degradation of CD4";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs" CFLO013743-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO004462-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation" CFLO000031-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO017852-PA 5 MetaCyc: PWY-7979;KEGG: 00514+2.4.1.109;KEGG: 00515+2.4.1.109;MetaCyc: PWY-7921;MetaCyc: PWY-7922 "Protein O-mannosylation III (mammals, core M3)";"Other types of O-glycan biosynthesis";"Mannose type O-glycan biosynthesis";"Protein O-mannosylation I (yeast)";"Protein O-mannosylation II (mammals, core M1 and core M2)" CFLO007163-PA 4 Reactome: R-HSA-3000157;Reactome: R-HSA-8874081;Reactome: R-HSA-3000171;Reactome: R-HSA-3000178 "Laminin interactions";"MET activates PTK2 signaling";"Non-integrin membrane-ECM interactions";"ECM proteoglycans" CFLO005702-PA 17 MetaCyc: PWY-5966-1;MetaCyc: PWY-5789;KEGG: 00061+6.4.1.2;Reactome: R-HSA-196780;KEGG: 00640+6.4.1.2;KEGG: 00620+6.4.1.2;Reactome: R-HSA-3371599;MetaCyc: PWY-6679;Reactome: R-HSA-200425;KEGG: 00720+6.4.1.2;KEGG: 00254+6.4.1.2;Reactome: R-HSA-2426168;MetaCyc: PWY-6722;MetaCyc: PWY-4381;Reactome: R-HSA-163765;MetaCyc: PWY-5744;MetaCyc: PWY-5743 "Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Fatty acid biosynthesis";"Biotin transport and metabolism";"Propanoate metabolism";"Pyruvate metabolism";"Defective HLCS causes multiple carboxylase deficiency";"Jadomycin biosynthesis";"Carnitine metabolism";"Carbon fixation pathways in prokaryotes";"Aflatoxin biosynthesis";"Activation of gene expression by SREBF (SREBP)";"Candicidin biosynthesis";"Fatty acid biosynthesis initiation (bacteria and plants)";"ChREBP activates metabolic gene expression";"Glyoxylate assimilation";"3-hydroxypropanoate cycle" CFLO004689-PA 4 KEGG: 00790+1.14.16.4;KEGG: 00380+1.14.16.4;MetaCyc: PWY-6030;Reactome: R-HSA-209931 "Folate biosynthesis";"Tryptophan metabolism";"Serotonin and melatonin biosynthesis";"Serotonin and melatonin biosynthesis" CFLO011036-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO007147-PA 8 Reactome: R-HSA-68952;Reactome: R-HSA-113501;Reactome: R-HSA-69091;Reactome: R-HSA-69183;Reactome: R-HSA-174430;Reactome: R-HSA-174411;Reactome: R-HSA-68962;Reactome: R-HSA-69166 "DNA replication initiation";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Polymerase switching";"Processive synthesis on the lagging strand";"Telomere C-strand synthesis initiation";"Polymerase switching on the C-strand of the telomere";"Activation of the pre-replicative complex";"Removal of the Flap Intermediate" CFLO002753-PA 13 Reactome: R-HSA-2029485;Reactome: R-HSA-381676;Reactome: R-HSA-139853;Reactome: R-HSA-983695;Reactome: R-HSA-112043;Reactome: R-HSA-114508;Reactome: R-HSA-5607763;Reactome: R-HSA-5578775;Reactome: R-HSA-4086398;Reactome: R-HSA-5218921;Reactome: R-HSA-422356;Reactome: R-HSA-1489509;Reactome: R-HSA-2871809 "Role of phospholipids in phagocytosis";"Glucagon-like Peptide-1 (GLP1) regulates insulin secretion";"Elevation of cytosolic Ca2+ levels";"Antigen activates B Cell Receptor (BCR) leading to generation of second messengers";"PLC beta mediated events";"Effects of PIP2 hydrolysis";"CLEC7A (Dectin-1) induces NFAT activation";"Ion homeostasis";"Ca2+ pathway";"VEGFR2 mediated cell proliferation";"Regulation of insulin secretion";"DAG and IP3 signaling";"FCERI mediated Ca+2 mobilization" CFLO014227-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO013491-PA 1 Reactome: R-HSA-162658 "Golgi Cisternae Pericentriolar Stack Reorganization" CFLO006198-PA 5 MetaCyc: PWY-5381;Reactome: R-HSA-196807;MetaCyc: PWY-5653;MetaCyc: PWY-7761;KEGG: 00760+2.7.7.18 "Pyridine nucleotide cycling (plants)";"Nicotinate metabolism";"NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde";"NAD salvage pathway II (PNC IV cycle)";"Nicotinate and nicotinamide metabolism" CFLO008570-PA 2 Reactome: R-HSA-3299685;KEGG: 00480+1.11.1.15 "Detoxification of Reactive Oxygen Species";"Glutathione metabolism" CFLO000235-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO012328-PA 2 Reactome: R-HSA-445095;Reactome: R-HSA-5576892 "Interaction between L1 and Ankyrins";"Phase 0 - rapid depolarisation" CFLO011179-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO001718-PA 4 MetaCyc: PWY-5188;KEGG: 00970+6.1.1.17;KEGG: 00860+6.1.1.17;Reactome: R-HSA-379726 "Tetrapyrrole biosynthesis I (from glutamate)";"Aminoacyl-tRNA biosynthesis";"Porphyrin and chlorophyll metabolism";"Mitochondrial tRNA aminoacylation" CFLO013403-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-5884;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782 "Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis" CFLO000818-PA 2 Reactome: R-HSA-5578775;Reactome: R-HSA-2672351 "Ion homeostasis";"Stimuli-sensing channels" CFLO005758-PA 16 Reactome: R-HSA-426496;Reactome: R-HSA-9029569;Reactome: R-HSA-8943723;Reactome: R-HSA-2559580;Reactome: R-HSA-8934593;Reactome: R-HSA-8936459;Reactome: R-HSA-8853884;Reactome: R-HSA-2559585;Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-8986944;Reactome: R-HSA-9022692;Reactome: R-HSA-9018519;Reactome: R-HSA-4086398;Reactome: R-HSA-5687128;Reactome: R-HSA-5628897 "Post-transcriptional silencing by small RNAs";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of PTEN mRNA translation";"Oxidative Stress Induced Senescence";"Regulation of RUNX1 Expression and Activity";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Transcriptional Regulation by VENTX";"Oncogene Induced Senescence";"Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"Transcriptional Regulation by MECP2";"Regulation of MECP2 expression and activity";"Estrogen-dependent gene expression";"Ca2+ pathway";"MAPK6/MAPK4 signaling";"TP53 Regulates Metabolic Genes" CFLO002136-PA 5 Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-427413;Reactome: R-HSA-5250924;Reactome: R-HSA-73762 "RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"NoRC negatively regulates rRNA expression";"B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Transcription Initiation" CFLO010554-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO010532-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO011409-PA 4 Reactome: R-HSA-3371453;Reactome: R-HSA-8950505;Reactome: R-HSA-1268020;Reactome: R-HSA-8949613 "Regulation of HSF1-mediated heat shock response";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Mitochondrial protein import";"Cristae formation" CFLO002956-PA 7 Reactome: R-HSA-2691232;Reactome: R-HSA-2894862;Reactome: R-HSA-2979096;Reactome: R-HSA-9013507;Reactome: R-HSA-2660826;Reactome: R-HSA-2644606;Reactome: R-HSA-2122948 "Constitutive Signaling by NOTCH1 HD Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus" CFLO010496-PA 2 Reactome: R-HSA-6784531;Reactome: R-HSA-6791226 "tRNA processing in the nucleus";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO000180-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO001021-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" CFLO017024-PA 1 Reactome: R-HSA-525793 "Myogenesis" CFLO002192-PA 4 Reactome: R-HSA-400511;Reactome: R-HSA-1799339;Reactome: R-HSA-381771;Reactome: R-HSA-422085 "Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)";"Synthesis, secretion, and deacylation of Ghrelin" CFLO019062-PA 11 Reactome: R-HSA-174430;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5696397;Reactome: R-HSA-5685942;Reactome: R-HSA-68962;Reactome: R-HSA-5656169;Reactome: R-HSA-6782135;Reactome: R-HSA-68952;Reactome: R-HSA-5696400;Reactome: R-HSA-5651801 "Telomere C-strand synthesis initiation";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"HDR through Homologous Recombination (HRR)";"Activation of the pre-replicative complex";"Termination of translesion DNA synthesis";"Dual incision in TC-NER";"DNA replication initiation";"Dual Incision in GG-NER";"PCNA-Dependent Long Patch Base Excision Repair" CFLO002616-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO011862-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO006306-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO010838-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO013621-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" CFLO012978-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO017169-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO002408-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO011480-PA 11 Reactome: R-HSA-6807878;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-2132295;Reactome: R-HSA-380270;Reactome: R-HSA-380259;Reactome: R-HSA-6811436;Reactome: R-HSA-3371497;Reactome: R-HSA-380284;Reactome: R-HSA-8854518 "COPI-mediated anterograde transport";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"MHC class II antigen presentation";"Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes";"COPI-independent Golgi-to-ER retrograde traffic";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Loss of proteins required for interphase microtubule organization from the centrosome";"AURKA Activation by TPX2" CFLO008854-PA 5 Reactome: R-HSA-3928662;Reactome: R-HSA-186763;Reactome: R-HSA-8849471;Reactome: R-HSA-5658442;Reactome: R-HSA-5218921 "EPHB-mediated forward signaling";"Downstream signal transduction";"PTK6 Regulates RHO GTPases, RAS GTPase and MAP kinases";"Regulation of RAS by GAPs";"VEGFR2 mediated cell proliferation" CFLO008191-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO010951-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" CFLO008204-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO002707-PA 2 KEGG: 00620+3.1.2.6;MetaCyc: PWY-5386 "Pyruvate metabolism";"Methylglyoxal degradation I" CFLO006293-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO010608-PA 1 Reactome: R-HSA-388844 "Receptor-type tyrosine-protein phosphatases" CFLO010396-PA 12 Reactome: R-HSA-68877;Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-3371497;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-9646399;Reactome: R-HSA-6807878;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257;Reactome: R-HSA-2132295 "Mitotic Prometaphase";"HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Aggrephagy";"COPI-mediated anterograde transport";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion";"MHC class II antigen presentation" CFLO012934-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO008253-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO016452-PA 3 MetaCyc: PWY-7426;Reactome: R-HSA-975574;KEGG: 00510+2.4.1.144 "Complex N-linked glycan biosynthesis (vertebrates)";"Reactions specific to the hybrid N-glycan synthesis pathway";"N-Glycan biosynthesis" CFLO018816-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" CFLO002826-PA 4 Reactome: R-HSA-4551295;KEGG: 00513+2.4.1.131;KEGG: 00510+2.4.1.131;Reactome: R-HSA-446193 "Defective ALG11 causes ALG11-CDG (CDG-1p)";"Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO013984-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO006290-PA 6 Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" CFLO014232-PA 1 MetaCyc: PWY-6829 "Trna methylation (yeast)" CFLO001787-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" CFLO000137-PA 2 KEGG: 00970+2.1.2.9;KEGG: 00670+2.1.2.9 "Aminoacyl-tRNA biosynthesis";"One carbon pool by folate" CFLO011466-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO012332-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-381038 "SRP-dependent cotranslational protein targeting to membrane";"XBP1(S) activates chaperone genes" CFLO011439-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO012969-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO001638-PA 42 Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-2559580;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-427389;Reactome: R-HSA-912446;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-73772;Reactome: R-HSA-9616222;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-201722;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-3214841;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-73728;Reactome: R-HSA-8939236;Reactome: R-HSA-2559582;Reactome: R-HSA-606279 "DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Oxidative Stress Induced Senescence";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Meiotic recombination";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"Transcriptional regulation of granulopoiesis";"Packaging Of Telomere Ends";"HCMV Early Events";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Formation of the beta-catenin:TCF transactivating complex";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HCMV Late Events";"Transcriptional regulation by small RNAs";"PKMTs methylate histone lysines";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"RNA Polymerase I Promoter Opening";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Senescence-Associated Secretory Phenotype (SASP)";"Deposition of new CENPA-containing nucleosomes at the centromere" CFLO009716-PA 7 KEGG: 00360+1.14.16.1;MetaCyc: PWY-6134;MetaCyc: PWY-7158;KEGG: 00790+1.14.16.1;Reactome: R-HSA-2160456;KEGG: 00400+1.14.16.1;Reactome: R-HSA-8964208 "Phenylalanine metabolism";"L-tyrosine biosynthesis IV";"L-phenylalanine degradation V";"Folate biosynthesis";"Phenylketonuria";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Phenylalanine metabolism" CFLO012107-PA 1 Reactome: R-HSA-196741 "Cobalamin (Cbl, vitamin B12) transport and metabolism" CFLO001318-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO004232-PA 1 Reactome: R-HSA-186797 "Signaling by PDGF" CFLO005795-PA 3 MetaCyc: PWY-7285;MetaCyc: PWY-7286;MetaCyc: PWY-6829 "Methylwyosine biosynthesis";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis";"Trna methylation (yeast)" CFLO010320-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO006431-PA 14 MetaCyc: PWY-7279;Reactome: R-HSA-71403;MetaCyc: PWY-6728;KEGG: 00720+1.3.5.1;Reactome: R-HSA-611105;KEGG: 00650+1.3.5.1;MetaCyc: PWY-3781;MetaCyc: PWY-5690;MetaCyc: PWY-561;MetaCyc: PWY-7254;KEGG: 00190+1.3.5.1;MetaCyc: PWY-6969;KEGG: 00020+1.3.5.1;MetaCyc: PWY-4302 "Aerobic respiration II (cytochrome c) (yeast)";"Citric acid cycle (TCA cycle)";"Methylaspartate cycle";"Carbon fixation pathways in prokaryotes";"Respiratory electron transport";"Butanoate metabolism";"Aerobic respiration I (cytochrome c)";"TCA cycle II (plants and fungi)";"Superpathway of glyoxylate cycle and fatty acid degradation";"TCA cycle VII (acetate-producers)";"Oxidative phosphorylation";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Citrate cycle (TCA cycle)";"Aerobic respiration III (alternative oxidase pathway)" CFLO008180-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" CFLO009443-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO011184-PA 3 MetaCyc: PWY-6348;KEGG: 00730+3.1.3.2;KEGG: 00740+3.1.3.2 "Phosphate acquisition";"Thiamine metabolism";"Riboflavin metabolism" CFLO000817-PA 2 Reactome: R-HSA-5578775;Reactome: R-HSA-2672351 "Ion homeostasis";"Stimuli-sensing channels" CFLO015438-PA 26 Reactome: R-HSA-1234158;Reactome: R-HSA-381340;Reactome: R-HSA-5617472;Reactome: R-HSA-201722;Reactome: R-HSA-3371568;Reactome: R-HSA-9617629;Reactome: R-HSA-9013695;Reactome: R-HSA-3134973;Reactome: R-HSA-5621575;Reactome: R-HSA-1912408;Reactome: R-HSA-2894862;Reactome: R-HSA-9614657;Reactome: R-HSA-3214847;Reactome: R-HSA-8941856;Reactome: R-HSA-1368082;Reactome: R-HSA-9013508;Reactome: R-HSA-2122947;Reactome: R-HSA-1989781;Reactome: R-HSA-9018519;Reactome: R-HSA-400253;Reactome: R-HSA-933541;Reactome: R-HSA-918233;Reactome: R-HSA-210744;Reactome: R-HSA-8866907;Reactome: R-HSA-2644606;Reactome: R-HSA-3899300 "Regulation of gene expression by Hypoxia-inducible Factor";"Transcriptional regulation of white adipocyte differentiation";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Formation of the beta-catenin:TCF transactivating complex";"Attenuation phase";"Regulation of FOXO transcriptional activity by acetylation";"NOTCH4 Intracellular Domain Regulates Transcription";"LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production";"CD209 (DC-SIGN) signaling";"Pre-NOTCH Transcription and Translation";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"FOXO-mediated transcription of cell death genes";"HATs acetylate histones";"RUNX3 regulates NOTCH signaling";"RORA activates gene expression";"NOTCH3 Intracellular Domain Regulates Transcription";"NOTCH1 Intracellular Domain Regulates Transcription";"PPARA activates gene expression";"Estrogen-dependent gene expression";"Circadian Clock";"TRAF6 mediated IRF7 activation";"TRAF3-dependent IRF activation pathway";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Activation of the TFAP2 (AP-2) family of transcription factors";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"SUMOylation of transcription cofactors" CFLO013488-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO006243-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" CFLO003987-PA 6 KEGG: 00052+3.2.1.23;KEGG: 00511+3.2.1.23;KEGG: 00600+3.2.1.23;KEGG: 00531+3.2.1.23;MetaCyc: PWY-6807;KEGG: 00604+3.2.1.23 "Galactose metabolism";"Other glycan degradation";"Sphingolipid metabolism";"Glycosaminoglycan degradation";"Xyloglucan degradation II (exoglucanase)";"Glycosphingolipid biosynthesis - ganglio series" CFLO002615-PA 30 Reactome: R-HSA-5607761;Reactome: R-HSA-8939902;Reactome: R-HSA-68949;Reactome: R-HSA-2894862;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-2122947;Reactome: R-HSA-5684264;Reactome: R-HSA-9020702;Reactome: R-HSA-69231;Reactome: R-HSA-917937;Reactome: R-HSA-983168;Reactome: R-HSA-202424;Reactome: R-HSA-2644607;Reactome: R-HSA-5676590;Reactome: R-HSA-174113;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-2644606;Reactome: R-HSA-2565942;Reactome: R-HSA-1170546;Reactome: R-HSA-5610780;Reactome: R-HSA-8854050;Reactome: R-HSA-400253;Reactome: R-HSA-1169091;Reactome: R-HSA-187577;Reactome: R-HSA-195253 "Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Orc1 removal from chromatin";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"NOTCH1 Intracellular Domain Regulates Transcription";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"Interleukin-1 signaling";"Cyclin D associated events in G1";"Iron uptake and transport";"Antigen processing: Ubiquitination & Proteasome degradation";"Downstream TCR signaling";"Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling";"NIK-->noncanonical NF-kB signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Degradation of GLI2 by the proteasome";"Neddylation";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Regulation of PLK1 Activity at G2/M Transition";"Prolactin receptor signaling";"Degradation of GLI1 by the proteasome";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Circadian Clock";"Activation of NF-kappaB in B cells";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex" CFLO006227-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO001964-PA 6 Reactome: R-HSA-446199;MetaCyc: PWY-922;Reactome: R-HSA-191273;Reactome: R-HSA-2426168;KEGG: 00900+4.1.1.33;MetaCyc: PWY-7391 "Synthesis of Dolichyl-phosphate";"Mevalonate pathway I";"Cholesterol biosynthesis";"Activation of gene expression by SREBF (SREBP)";"Terpenoid backbone biosynthesis";"Isoprene biosynthesis II (engineered)" CFLO000569-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO005601-PA 9 Reactome: R-HSA-3656237;Reactome: R-HSA-2024096;Reactome: R-HSA-3560783;Reactome: R-HSA-3560801;Reactome: R-HSA-975634;Reactome: R-HSA-2022928;Reactome: R-HSA-1971475;Reactome: R-HSA-4420332;Reactome: R-HSA-3656253 "Defective EXT2 causes exostoses 2";"HS-GAG degradation";"Defective B4GALT7 causes EDS, progeroid type";"Defective B3GAT3 causes JDSSDHD";"Retinoid metabolism and transport";"HS-GAG biosynthesis";"A tetrasaccharide linker sequence is required for GAG synthesis";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS" CFLO015351-PA 1 Reactome: R-HSA-8851805 "MET activates RAS signaling" CFLO013133-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO004224-PA 16 Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226 "Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO000816-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO000171-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" CFLO006639-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-5205685 "Mitochondrial protein import";"Pink/Parkin Mediated Mitophagy" CFLO001476-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" CFLO012515-PA 29 Reactome: R-HSA-167200;Reactome: R-HSA-5696400;Reactome: R-HSA-674695;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-167152;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-6796648;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-427413;Reactome: R-HSA-167172;Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-75955;Reactome: R-HSA-167162;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-113418 "Formation of HIV-1 elongation complex containing HIV-1 Tat";"Dual Incision in GG-NER";"RNA Polymerase II Pre-transcription Events";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"NoRC negatively regulates rRNA expression";"Transcription of the HIV genome";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II HIV Promoter Escape";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Formation of the Early Elongation Complex" CFLO009542-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" CFLO015495-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO008797-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" CFLO008609-PA 1 KEGG: 00480+3.4.11.1 "Glutathione metabolism" CFLO005532-PA 3 Reactome: R-HSA-8868766;Reactome: R-HSA-6785470;Reactome: R-HSA-6784531 "rRNA processing in the mitochondrion";"tRNA processing in the mitochondrion";"tRNA processing in the nucleus" CFLO019161-PA 3 Reactome: R-HSA-189451;KEGG: 00860+1.3.3.4;MetaCyc: PWY-7159 "Heme biosynthesis";"Porphyrin and chlorophyll metabolism";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)" CFLO017717-PA 8 Reactome: R-HSA-1855183;KEGG: 00521+5.5.1.4;MetaCyc: PWY-6372;KEGG: 00562+5.5.1.4;MetaCyc: PWY-4661;MetaCyc: PWY-6580;MetaCyc: PWY-2301;MetaCyc: PWY-6664 "Synthesis of IP2, IP, and Ins in the cytosol";"Streptomycin biosynthesis";"1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)";"Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)";"Phosphatidylinositol biosynthesis I (bacteria)";"Myo-inositol biosynthesis";"Di-myo-inositol phosphate biosynthesis" CFLO007724-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO008780-PA 14 MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7035;KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433;Reactome: R-HSA-75876;MetaCyc: PWY-7725;MetaCyc: PWY-8041 "Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"(9Z)-tricosene biosynthesis";"Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis" CFLO013232-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-1663150 "Glycosphingolipid metabolism";"The activation of arylsulfatases" CFLO001752-PA 2 Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO006298-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" CFLO006585-PA 3 MetaCyc: PWY-6689;MetaCyc: PWY-7803;Reactome: R-HSA-6784531 "Trna splicing I";"Trna splicing II";"tRNA processing in the nucleus" CFLO007510-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO004385-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO000810-PA 2 Reactome: R-HSA-5578775;Reactome: R-HSA-2672351 "Ion homeostasis";"Stimuli-sensing channels" CFLO000302-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO006717-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO003001-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" CFLO006138-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO018970-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO002310-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO014491-PA 4 Reactome: R-HSA-77595;Reactome: R-HSA-72187;Reactome: R-HSA-73856;Reactome: R-HSA-72163 "Processing of Intronless Pre-mRNAs";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Major Pathway" CFLO013888-PA 1 Reactome: R-HSA-400253 "Circadian Clock" CFLO010968-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" CFLO013630-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO017624-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO002102-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO008777-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO001566-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" CFLO012503-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" CFLO005590-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO003031-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO000881-PA 7 MetaCyc: PWY-7807;MetaCyc: PWY-7805;Reactome: R-HSA-74217;Reactome: R-HSA-6798695;KEGG: 00230+2.4.2.7;MetaCyc: PWY-6610;MetaCyc: PWY-6605 "Glyphosate degradation III";"(aminomethyl)phosphonate degradation";"Purine salvage";"Neutrophil degranulation";"Purine metabolism";"Adenine salvage";"Adenine and adenosine salvage II" CFLO017155-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO000351-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO016120-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO013673-PA 6 Reactome: R-HSA-9010553;Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-73856;Reactome: R-HSA-975957 "Regulation of expression of SLITs and ROBOs";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO013406-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7656;MetaCyc: PWY-6733;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782 "Wax biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Sporopollenin precursors biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis" CFLO010547-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO000017-PA 5 KEGG: 00010+4.1.1.32;MetaCyc: PWY-7383;Reactome: R-HSA-70263;KEGG: 00020+4.1.1.32;KEGG: 00620+4.1.1.32 "Glycolysis / Gluconeogenesis";"Anaerobic energy metabolism (invertebrates, cytosol)";"Gluconeogenesis";"Citrate cycle (TCA cycle)";"Pyruvate metabolism" CFLO005095-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO011840-PA 1 Reactome: R-HSA-427413 "NoRC negatively regulates rRNA expression" CFLO012026-PA 1 Reactome: R-HSA-8964572 "Lipid particle organization" CFLO000919-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO019688-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO017848-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO000339-PA 13 Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO012991-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO013271-PA 18 KEGG: 00591+3.1.1.4;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166;MetaCyc: PWY-7783;Reactome: R-HSA-1482801;MetaCyc: PWY-7409;KEGG: 00590+3.1.1.4;MetaCyc: PWY-7416;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482788;Reactome: R-HSA-1482839;MetaCyc: PWY-7417;Reactome: R-HSA-1482922;MetaCyc: PWY-8053;Reactome: R-HSA-1482925;MetaCyc: PWY-8051 "Linoleic acid metabolism";"Ether lipid metabolism";"Synthesis of PA";"Plasmalogen degradation";"Acyl chain remodelling of PS";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Arachidonic acid metabolism";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PC";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)";"Acyl chain remodelling of PI";"Anandamide biosynthesis II";"Acyl chain remodelling of PG";"Anandamide biosynthesis I" CFLO006635-PA 2 Reactome: R-HSA-168276;Reactome: R-HSA-1169408 "NS1 Mediated Effects on Host Pathways";"ISG15 antiviral mechanism" CFLO002873-PA 8 MetaCyc: PWY-5738;Reactome: R-HSA-6787639;MetaCyc: PWY-5739;MetaCyc: PWY-66;KEGG: 00520+4.2.1.47;KEGG: 00051+4.2.1.47;MetaCyc: PWY-7573;MetaCyc: PWY-5740 "GDP-6-deoxy-D-talose biosynthesis";"GDP-fucose biosynthesis";"GDP-D-perosamine biosynthesis";"GDP-L-fucose biosynthesis I (from GDP-D-mannose)";"Amino sugar and nucleotide sugar metabolism";"Fructose and mannose metabolism";"GDP-mycosamine biosynthesis";"GDP-L-colitose biosynthesis" CFLO003456-PA 2 Reactome: R-HSA-8949664;Reactome: R-HSA-8949215 "Processing of SMDT1";"Mitochondrial calcium ion transport" CFLO017928-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO006809-PA 8 KEGG: 00524+2.7.1.1;KEGG: 00521+2.7.1.1;KEGG: 00500+2.7.1.1;KEGG: 00010+2.7.1.1;KEGG: 00051+2.7.1.1;Reactome: R-HSA-70171;KEGG: 00520+2.7.1.1;KEGG: 00052+2.7.1.1 "Neomycin, kanamycin and gentamicin biosynthesis";"Streptomycin biosynthesis";"Starch and sucrose metabolism";"Glycolysis / Gluconeogenesis";"Fructose and mannose metabolism";"Glycolysis";"Amino sugar and nucleotide sugar metabolism";"Galactose metabolism" CFLO006082-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO014705-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO008472-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO001535-PA 14 Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-203927;Reactome: R-HSA-8934593;Reactome: R-HSA-4086398;Reactome: R-HSA-426486;Reactome: R-HSA-5687128;Reactome: R-HSA-8943723;Reactome: R-HSA-9018519;Reactome: R-HSA-8986944;Reactome: R-HSA-426496;Reactome: R-HSA-9029569;Reactome: R-HSA-9022692 "Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"MicroRNA (miRNA) biogenesis";"Regulation of RUNX1 Expression and Activity";"Ca2+ pathway";"Small interfering RNA (siRNA) biogenesis";"MAPK6/MAPK4 signaling";"Regulation of PTEN mRNA translation";"Estrogen-dependent gene expression";"Transcriptional Regulation by MECP2";"Post-transcriptional silencing by small RNAs";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of MECP2 expression and activity" CFLO006211-PA 16 Reactome: R-HSA-174084;Reactome: R-HSA-174184;Reactome: R-HSA-174048;Reactome: R-HSA-2559582;Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-176407;Reactome: R-HSA-179409;Reactome: R-HSA-983168;Reactome: R-HSA-174154;Reactome: R-HSA-141430;Reactome: R-HSA-174178;Reactome: R-HSA-8853884;Reactome: R-HSA-176412;Reactome: R-HSA-176409;Reactome: R-HSA-2467813 "Autodegradation of Cdh1 by Cdh1:APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B";"Senescence-Associated Secretory Phenotype (SASP)";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC-Cdc20 mediated degradation of Nek2A";"Antigen processing: Ubiquitination & Proteasome degradation";"APC/C:Cdc20 mediated degradation of Securin";"Inactivation of APC/C via direct inhibition of the APC/C complex";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Transcriptional Regulation by VENTX";"Phosphorylation of the APC/C";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids" CFLO016607-PA 11 KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-5693571;Reactome: R-HSA-1834949;Reactome: R-HSA-3270619;KEGG: 05170+2.7.11.1;Reactome: R-HSA-8866654 "Human papillomavirus infection";"PI3K-Akt signaling pathway";"Human cytomegalovirus infection";"Thermogenesis";"Relaxin signaling pathway";"mTOR signaling pathway";"Nonhomologous End-Joining (NHEJ)";"Cytosolic sensors of pathogen-associated DNA";"IRF3-mediated induction of type I IFN";"Human immunodeficiency virus 1 infection";"E3 ubiquitin ligases ubiquitinate target proteins" CFLO018768-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO009322-PA 2 Reactome: R-HSA-6814122;Reactome: R-HSA-418594 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"G alpha (i) signalling events" CFLO012496-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" CFLO016124-PA 1 Reactome: R-HSA-2142789 "Ubiquinol biosynthesis" CFLO015017-PA 8 Reactome: R-HSA-6798695;Reactome: R-HSA-1632852;Reactome: R-HSA-5628897;Reactome: R-HSA-9639288;Reactome: R-HSA-166208;Reactome: R-HSA-165159;Reactome: R-HSA-380972;Reactome: R-HSA-8943724 "Neutrophil degranulation";"Macroautophagy";"TP53 Regulates Metabolic Genes";"Amino acids regulate mTORC1";"mTORC1-mediated signalling";"mTOR signalling";"Energy dependent regulation of mTOR by LKB1-AMPK";"Regulation of PTEN gene transcription" CFLO017946-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706 "Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Translation initiation complex formation";"Peptide chain elongation";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO016290-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" CFLO007124-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO003270-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-416482;Reactome: R-HSA-193648 "Rho GTPase cycle";"G alpha (12/13) signalling events";"NRAGE signals death through JNK" CFLO008006-PA 4 Reactome: R-HSA-2644606;Reactome: R-HSA-2122947;Reactome: R-HSA-2894862;Reactome: R-HSA-350054 "Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Notch-HLH transcription pathway" CFLO001266-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO014501-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO002131-PA 8 Reactome: R-HSA-9636467;Reactome: R-HSA-77387;Reactome: R-HSA-182218;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-167590;Reactome: R-HSA-983712;Reactome: R-HSA-9639288 "Blockage of phagosome acidification";"Insulin receptor recycling";"Nef Mediated CD8 Down-regulation";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Nef Mediated CD4 Down-regulation";"Ion channel transport";"Amino acids regulate mTORC1" CFLO016376-PA 2 Reactome: R-HSA-1483148;Reactome: R-HSA-1483166 "Synthesis of PG";"Synthesis of PA" CFLO010322-PA 33 Reactome: R-HSA-113418;Reactome: R-HSA-5696395;Reactome: R-HSA-167162;Reactome: R-HSA-69656;Reactome: R-HSA-427413;Reactome: R-HSA-75955;Reactome: R-HSA-73772;Reactome: R-HSA-73863;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-69202;Reactome: R-HSA-6782210;Reactome: R-HSA-8939236;Reactome: R-HSA-69273;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-167172;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-6796648;Reactome: R-HSA-6781823;Reactome: R-HSA-112382;Reactome: R-HSA-167152;Reactome: R-HSA-69231;Reactome: R-HSA-75953;Reactome: R-HSA-6781827;Reactome: R-HSA-167200;Reactome: R-HSA-674695 "Formation of the Early Elongation Complex";"Formation of Incision Complex in GG-NER";"RNA Polymerase II HIV Promoter Escape";"Cyclin A:Cdk2-associated events at S phase entry";"NoRC negatively regulates rRNA expression";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Promoter Escape";"RNA Polymerase I Transcription Termination";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"Cyclin E associated events during G1/S transition";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cyclin A/B1/B2 associated events during G2/M transition";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Transcription of the HIV genome";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of TC-NER Pre-Incision Complex";"Formation of RNA Pol II elongation complex";"Formation of HIV elongation complex in the absence of HIV Tat";"Cyclin D associated events in G1";"RNA Polymerase II Transcription Initiation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events" CFLO005081-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO005723-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO015639-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO004964-PA 5 Reactome: R-HSA-8957275;Reactome: R-HSA-381426;Reactome: R-HSA-532668;Reactome: R-HSA-879415;Reactome: R-HSA-901042 "Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Advanced glycosylation endproduct receptor signaling";"Calnexin/calreticulin cycle" CFLO005715-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7656;MetaCyc: PWY-6733;MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84 "Wax biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis" CFLO003985-PA 11 Reactome: R-HSA-5651801;Reactome: R-HSA-5696400;Reactome: R-HSA-68952;Reactome: R-HSA-6782135;Reactome: R-HSA-5656169;Reactome: R-HSA-68962;Reactome: R-HSA-5696397;Reactome: R-HSA-5685942;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-174430 "PCNA-Dependent Long Patch Base Excision Repair";"Dual Incision in GG-NER";"DNA replication initiation";"Dual incision in TC-NER";"Termination of translesion DNA synthesis";"Activation of the pre-replicative complex";"Gap-filling DNA repair synthesis and ligation in GG-NER";"HDR through Homologous Recombination (HRR)";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Telomere C-strand synthesis initiation" CFLO003656-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO001063-PA 4 KEGG: 00785+2.8.1.8;Reactome: R-HSA-389661;MetaCyc: PWY-6987;MetaCyc: PWY-7382 "Lipoic acid metabolism";"Glyoxylate metabolism and glycine degradation";"Lipoate biosynthesis and incorporation III (Bacillus)";"Lipoate biosynthesis and incorporation IV (yeast)" CFLO010720-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" CFLO018693-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO014967-PA 14 MetaCyc: PWY-181;MetaCyc: PWY-3661;MetaCyc: PWY-2161;KEGG: 00670+2.1.2.1;KEGG: 00680+2.1.2.1;Reactome: R-HSA-196757;KEGG: 00630+2.1.2.1;MetaCyc: PWY-2201;MetaCyc: PWY-5497;KEGG: 00260+2.1.2.1;MetaCyc: PWY-1622;MetaCyc: PWY-3841;MetaCyc: PWY-3661-1;KEGG: 00460+2.1.2.1 "Photorespiration ";"Glycine betaine degradation I";"Folate polyglutamylation";"One carbon pool by folate";"Methane metabolism";"Metabolism of folate and pterines";"Glyoxylate and dicarboxylate metabolism";"Folate transformations I";"Purine nucleobases degradation II (anaerobic)";"Glycine, serine and threonine metabolism";"Formaldehyde assimilation I (serine pathway)";"Folate transformations II (plants)";"Glycine betaine degradation II (mammalian)";"Cyanoamino acid metabolism" CFLO002725-PA 5 Reactome: R-HSA-111458;MetaCyc: PWY-4361;Reactome: R-HSA-1237112;Reactome: R-HSA-9627069;KEGG: 00270+4.2.1.109 "Formation of apoptosome";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Methionine salvage pathway";"Regulation of the apoptosome activity";"Cysteine and methionine metabolism" CFLO006671-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" CFLO008515-PA 11 Reactome: R-HSA-8941856;Reactome: R-HSA-9013508;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947;Reactome: R-HSA-350054;Reactome: R-HSA-9013695;Reactome: R-HSA-2894862;Reactome: R-HSA-1912408;Reactome: R-HSA-72163;Reactome: R-HSA-210744;Reactome: R-HSA-2173796 "RUNX3 regulates NOTCH signaling";"NOTCH3 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"Notch-HLH transcription pathway";"NOTCH4 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Pre-NOTCH Transcription and Translation";"mRNA Splicing - Major Pathway";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"SMAD2/SMAD3:SMAD4 heterotrimer regulates transcription" CFLO003284-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO003261-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO004930-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO012768-PA 1 Reactome: R-HSA-111465 "Apoptotic cleavage of cellular proteins" CFLO002914-PA 1 Reactome: R-HSA-211945 "Phase I - Functionalization of compounds" CFLO005099-PA 18 Reactome: R-HSA-1482839;MetaCyc: PWY-7417;Reactome: R-HSA-1482788;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482925;MetaCyc: PWY-8051;MetaCyc: PWY-8053;Reactome: R-HSA-1482922;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166;KEGG: 00591+3.1.1.4;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;MetaCyc: PWY-7416;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482801;MetaCyc: PWY-7783;MetaCyc: PWY-7409 "Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)";"Acyl chain remodelling of PC";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PG";"Anandamide biosynthesis I";"Anandamide biosynthesis II";"Acyl chain remodelling of PI";"Ether lipid metabolism";"Synthesis of PA";"Linoleic acid metabolism";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Arachidonic acid metabolism";"Acyl chain remodelling of PS";"Plasmalogen degradation";"Phospholipid remodeling (phosphatidylethanolamine, yeast)" CFLO019130-PA 10 KEGG: 00230+6.3.3.1;KEGG: 00670+2.1.2.2;MetaCyc: PWY-6122;Reactome: R-HSA-73817;MetaCyc: PWY-6121;MetaCyc: PWY-6277;KEGG: 00230+2.1.2.2;KEGG: 00670+2.1.2.9;MetaCyc: PWY-6613;KEGG: 00970+2.1.2.9 "Purine metabolism";"One carbon pool by folate";"5-aminoimidazole ribonucleotide biosynthesis II";"Purine ribonucleoside monophosphate biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis I";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"Purine metabolism";"One carbon pool by folate";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Aminoacyl-tRNA biosynthesis" CFLO011401-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO003677-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" CFLO000269-PA 1 Reactome: R-HSA-2470946 "Cohesin Loading onto Chromatin" CFLO018799-PA 3 Reactome: R-HSA-1855167;MetaCyc: PWY-6369;KEGG: 04070+2.7.4.24+2.7.4.21 "Synthesis of pyrophosphates in the cytosol";"Inositol diphosphates biosynthesis";"Phosphatidylinositol signaling system" CFLO000209-PA 5 Reactome: R-HSA-5674400;Reactome: R-HSA-6804757;Reactome: R-HSA-389357;Reactome: R-HSA-5218920;Reactome: R-HSA-1257604 "Constitutive Signaling by AKT1 E17K in Cancer";"Regulation of TP53 Degradation";"CD28 dependent PI3K/Akt signaling";"VEGFR2 mediated vascular permeability";"PIP3 activates AKT signaling" CFLO012344-PA 8 KEGG: 05170+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-6791226;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1 "Human immunodeficiency virus 1 infection";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Major pathway of rRNA processing in the nucleolus and cytosol";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Human papillomavirus infection" CFLO008724-PA 1 Reactome: R-HSA-8963889 "Assembly of active LPL and LIPC lipase complexes" CFLO001680-PA 13 Reactome: R-HSA-499943;MetaCyc: PWY-7210;KEGG: 00480+1.17.4.1;KEGG: 00240+1.17.4.1;MetaCyc: PWY-7184;KEGG: 00230+1.17.4.1;MetaCyc: PWY-7220;MetaCyc: PWY-6545;MetaCyc: PWY-7226;MetaCyc: PWY-7222;KEGG: 00983+1.17.4.1;MetaCyc: PWY-7198;MetaCyc: PWY-7227 "Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Glutathione metabolism";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Purine metabolism";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Adenosine deoxyribonucleotides de novo biosynthesis" CFLO014756-PA 1 Reactome: R-HSA-525793 "Myogenesis" CFLO008391-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO001560-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO008697-PA 11 KEGG: 00562+2.7.1.137;Reactome: R-HSA-1660516;Reactome: R-HSA-109704;Reactome: R-HSA-1632852;Reactome: R-HSA-1660514;KEGG: 04070+2.7.1.137;MetaCyc: PWY-6352;Reactome: R-HSA-1660517;Reactome: R-HSA-168138;Reactome: R-HSA-5668599;Reactome: R-HSA-1660499 "Inositol phosphate metabolism";"Synthesis of PIPs at the early endosome membrane";"PI3K Cascade";"Macroautophagy";"Synthesis of PIPs at the Golgi membrane";"Phosphatidylinositol signaling system";"3-phosphoinositide biosynthesis";"Synthesis of PIPs at the late endosome membrane";"Toll Like Receptor 9 (TLR9) Cascade";"RHO GTPases Activate NADPH Oxidases";"Synthesis of PIPs at the plasma membrane" CFLO009325-PA 3 KEGG: 00230+4.6.1.2;Reactome: R-HSA-392154;Reactome: R-HSA-445355 "Purine metabolism";"Nitric oxide stimulates guanylate cyclase";"Smooth Muscle Contraction" CFLO002731-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO009860-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO016363-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO012016-PA 1 Reactome: R-HSA-6785631 "ERBB2 Regulates Cell Motility" CFLO001970-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO013373-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO016927-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" CFLO011380-PA 5 Reactome: R-HSA-389957;Reactome: R-HSA-6814122;Reactome: R-HSA-390471;Reactome: R-HSA-389960;Reactome: R-HSA-390450 "Prefoldin mediated transfer of substrate to CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Association of TriC/CCT with target proteins during biosynthesis";"Formation of tubulin folding intermediates by CCT/TriC";"Folding of actin by CCT/TriC" CFLO007127-PA 6 MetaCyc: PWY-6855;MetaCyc: PWY-5514;KEGG: 00030+3.1.1.31;MetaCyc: PWY-8004;KEGG: 00520+3.5.99.6;MetaCyc: PWY-6906 "Chitin degradation I (archaea)";"UDP-N-acetyl-D-galactosamine biosynthesis II";"Pentose phosphate pathway";"Entner-Doudoroff pathway I";"Amino sugar and nucleotide sugar metabolism";"Chitin derivatives degradation" CFLO017707-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" CFLO003143-PA 3 KEGG: 00643+1.13.11.5;Reactome: R-HSA-8963684;KEGG: 00350+1.13.11.5 "Styrene degradation";"Tyrosine catabolism";"Tyrosine metabolism" CFLO017475-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO014150-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" CFLO004433-PA 10 KEGG: 00720+1.5.1.5+3.5.4.9;MetaCyc: PWY-3841;MetaCyc: PWY-7909;KEGG: 00670+1.5.1.5+3.5.4.9;MetaCyc: PWY-6613;MetaCyc: PWY-5497;MetaCyc: PWY-2201;MetaCyc: PWY-1722;MetaCyc: PWY-5030;Reactome: R-HSA-196757 "Carbon fixation pathways in prokaryotes";"Folate transformations II (plants)";"Formaldehyde oxidation VII (THF pathway)";"One carbon pool by folate";"Tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate";"Purine nucleobases degradation II (anaerobic)";"Folate transformations I";"Formate assimilation into 5,10-methylenetetrahydrofolate";"L-histidine degradation III";"Metabolism of folate and pterines" CFLO006361-PA 6 MetaCyc: PWY-6309;Reactome: R-HSA-71240;MetaCyc: PWY-7717;MetaCyc: PWY-5651;MetaCyc: PWY-7765;KEGG: 00380+1.14.13.9 "L-tryptophan degradation XI (mammalian, via kynurenine)";"Tryptophan catabolism";"3-hydroxy-4-methyl-anthranilate biosynthesis I";"L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde";"3-hydroxy-4-methyl-anthranilate biosynthesis II";"Tryptophan metabolism" CFLO006958-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO011228-PA 11 MetaCyc: PWY-7185;KEGG: 00230+3.1.3.5;MetaCyc: PWY-6596;MetaCyc: PWY-6608;MetaCyc: PWY-5695;MetaCyc: PWY-7821;MetaCyc: PWY-6606;KEGG: 00240+3.1.3.5;MetaCyc: PWY-5381;MetaCyc: PWY-6607;KEGG: 00760+3.1.3.5 "UTP and CTP dephosphorylation I";"Purine metabolism";"Adenosine nucleotides degradation I";"Guanosine nucleotides degradation III";"Inosine 5'-phosphate degradation";"Tunicamycin biosynthesis";"Guanosine nucleotides degradation II";"Pyrimidine metabolism";"Pyridine nucleotide cycling (plants)";"Guanosine nucleotides degradation I";"Nicotinate and nicotinamide metabolism" CFLO000481-PA 1 Reactome: R-HSA-381038 "XBP1(S) activates chaperone genes" CFLO013540-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO000995-PA 1 Reactome: R-HSA-6803204 "TP53 Regulates Transcription of Genes Involved in Cytochrome C Release" CFLO001968-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO018753-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO002904-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO006593-PA 56 Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553 "Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs" CFLO012372-PA 57 Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785 "Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Neutrophil degranulation";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome" CFLO012234-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" CFLO008625-PA 1 Reactome: R-HSA-156842 "Eukaryotic Translation Elongation" CFLO013848-PA 17 Reactome: R-HSA-156827;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-6790901;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-9010553 "L13a-mediated translational silencing of Ceruloplasmin expression";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Translation initiation complex formation";"Peptide chain elongation";"rRNA modification in the nucleus and cytosol";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs" CFLO008014-PA 2 MetaCyc: PWY-6829;Reactome: R-HSA-6782315 "Trna methylation (yeast)";"tRNA modification in the nucleus and cytosol" CFLO017332-PA 1 Reactome: R-HSA-1483148 "Synthesis of PG" CFLO004425-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO008710-PA 11 MetaCyc: PWY-7391;MetaCyc: PWY-6383;MetaCyc: PWY-6859;MetaCyc: PWY-7102;Reactome: R-HSA-191273;MetaCyc: PWY-7560;KEGG: 00900+5.3.3.2;MetaCyc: PWY-7524;MetaCyc: PWY-5123;MetaCyc: PWY-922;MetaCyc: PWY-6174 "Isoprene biosynthesis II (engineered)";"Mono-trans, poly-cis decaprenyl phosphate biosynthesis";"All-trans-farnesol biosynthesis";"Bisabolene biosynthesis (engineered)";"Cholesterol biosynthesis";"Methylerythritol phosphate pathway II";"Terpenoid backbone biosynthesis";"Mevalonate pathway III (archaea)";"Trans, trans-farnesyl diphosphate biosynthesis";"Mevalonate pathway I";"Mevalonate pathway II (archaea)" CFLO008122-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" CFLO012985-PA 4 Reactome: R-HSA-167160;Reactome: R-HSA-72086;Reactome: R-HSA-77075;MetaCyc: PWY-7375 "RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"Mrna capping I" CFLO018464-PA 7 Reactome: R-HSA-6798695;MetaCyc: PWY-5941;KEGG: 00500+2.4.1.25;Reactome: R-HSA-70221;MetaCyc: PWY-7238;MetaCyc: PWY-6737;MetaCyc: PWY-6724 "Neutrophil degranulation";"Glycogen degradation II";"Starch and sucrose metabolism";"Glycogen breakdown (glycogenolysis)";"Sucrose biosynthesis II";"Starch degradation V";"Starch degradation II" CFLO004102-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO003018-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO000885-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO006752-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO009647-PA 3 Reactome: R-HSA-8936459;Reactome: R-HSA-427413;Reactome: R-HSA-400206 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"NoRC negatively regulates rRNA expression";"Regulation of lipid metabolism by PPARalpha" CFLO006881-PA 5 Reactome: R-HSA-427413;KEGG: 00270+2.1.1.37;Reactome: R-HSA-212300;Reactome: R-HSA-4655427;Reactome: R-HSA-5334118 "NoRC negatively regulates rRNA expression";"Cysteine and methionine metabolism";"PRC2 methylates histones and DNA";"SUMOylation of DNA methylation proteins";"DNA methylation" CFLO003301-PA 1 Reactome: R-HSA-5693568 "Resolution of D-loop Structures through Holliday Junction Intermediates" CFLO001690-PA 1 Reactome: R-HSA-1483101 "Synthesis of PS" CFLO011075-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" CFLO018840-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO006668-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO011214-PA 6 Reactome: R-HSA-6791226;Reactome: R-HSA-450513;Reactome: R-HSA-429958;Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-450385 "Major pathway of rRNA processing in the nucleolus and cytosol";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA" CFLO002000-PA 11 MetaCyc: PWY-6545;MetaCyc: PWY-7821;KEGG: 00760+3.6.1.9;KEGG: 00740+3.6.1.9;KEGG: 00770+3.6.1.9;KEGG: 00240+3.6.1.9;MetaCyc: PWY-7184;MetaCyc: PWY-7187;KEGG: 00230+3.6.1.9;KEGG: 00500+3.6.1.9;MetaCyc: PWY-7206 "Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Tunicamycin biosynthesis";"Nicotinate and nicotinamide metabolism";"Riboflavin metabolism";"Pantothenate and CoA biosynthesis";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Purine metabolism";"Starch and sucrose metabolism";"Pyrimidine deoxyribonucleotides dephosphorylation" CFLO005629-PA 7 Reactome: R-HSA-5628897;Reactome: R-HSA-8943724;Reactome: R-HSA-9639288;Reactome: R-HSA-165159;Reactome: R-HSA-380972;Reactome: R-HSA-1632852;Reactome: R-HSA-166208 "TP53 Regulates Metabolic Genes";"Regulation of PTEN gene transcription";"Amino acids regulate mTORC1";"mTOR signalling";"Energy dependent regulation of mTOR by LKB1-AMPK";"Macroautophagy";"mTORC1-mediated signalling" CFLO003118-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO000325-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012 "SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency" CFLO012257-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO014421-PA 5 Reactome: R-HSA-5674400;Reactome: R-HSA-6804757;Reactome: R-HSA-389357;Reactome: R-HSA-5218920;Reactome: R-HSA-1257604 "Constitutive Signaling by AKT1 E17K in Cancer";"Regulation of TP53 Degradation";"CD28 dependent PI3K/Akt signaling";"VEGFR2 mediated vascular permeability";"PIP3 activates AKT signaling" CFLO003723-PA 5 Reactome: R-HSA-1834941;Reactome: R-HSA-3270619;Reactome: R-HSA-3249367;Reactome: R-HSA-3134975;Reactome: R-HSA-6798695 "STING mediated induction of host immune responses";"IRF3-mediated induction of type I IFN";"STAT6-mediated induction of chemokines";"Regulation of innate immune responses to cytosolic DNA";"Neutrophil degranulation" CFLO015637-PA 40 Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-9018519;Reactome: R-HSA-167162;Reactome: R-HSA-75955;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-5601884;Reactome: R-HSA-6803529;Reactome: R-HSA-6782210;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-72165;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-73776;Reactome: R-HSA-203927;Reactome: R-HSA-167172;Reactome: R-HSA-6796648;Reactome: R-HSA-73779;Reactome: R-HSA-5578749;Reactome: R-HSA-112382;Reactome: R-HSA-6781823;Reactome: R-HSA-5617472;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-8851708;Reactome: R-HSA-6781827;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-168325 "Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Estrogen-dependent gene expression";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Elongation";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"PIWI-interacting RNA (piRNA) biogenesis";"FGFR2 alternative splicing";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Minor Pathway";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Promoter Escape";"MicroRNA (miRNA) biogenesis";"Transcription of the HIV genome";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Transcriptional regulation by small RNAs";"Formation of RNA Pol II elongation complex";"Formation of TC-NER Pre-Incision Complex";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"Signaling by FGFR2 IIIa TM";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Viral Messenger RNA Synthesis" CFLO004389-PA 4 Reactome: R-HSA-418359;Reactome: R-HSA-1912420;Reactome: R-HSA-936837;Reactome: R-HSA-5578775 "Reduction of cytosolic Ca++ levels";"Pre-NOTCH Processing in Golgi";"Ion transport by P-type ATPases";"Ion homeostasis" CFLO001981-PA 3 Reactome: R-HSA-2024096;KEGG: 00531+3.2.1.50;Reactome: R-HSA-2206282 "HS-GAG degradation";"Glycosaminoglycan degradation";"MPS IIIB - Sanfilippo syndrome B" CFLO014397-PA 2 Reactome: R-HSA-110320;Reactome: R-HSA-5689880 "Translesion Synthesis by POLH";"Ub-specific processing proteases" CFLO011095-PA 1 Reactome: R-HSA-419771 "Opsins" CFLO013495-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO003269-PA 1 Reactome: R-HSA-72203 "Processing of Capped Intron-Containing Pre-mRNA" CFLO008719-PA 1 Reactome: R-HSA-9640463 "Wax biosynthesis" CFLO004365-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO016523-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO013096-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO018366-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO004931-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO013134-PA 10 KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04660+2.7.10.2;Reactome: R-HSA-5357956;KEGG: 05170+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-5357905 "Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"T cell receptor signaling pathway";"TNFR1-induced NFkappaB signaling pathway";"Human immunodeficiency virus 1 infection";"mTOR signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"Regulation of TNFR1 signaling" CFLO016898-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO013412-PA 1 Reactome: R-HSA-5689896 "Ovarian tumor domain proteases" CFLO004669-PA 1 Reactome: R-HSA-1971475 "A tetrasaccharide linker sequence is required for GAG synthesis" CFLO007240-PA 13 KEGG: 00511+3.2.1.52;MetaCyc: PWY-7822;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;MetaCyc: PWY-6902;KEGG: 00531+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00603+3.2.1.52;KEGG: 00520+3.2.1.52;Reactome: R-HSA-2024101;Reactome: R-HSA-1660662;Reactome: R-HSA-2022857;Reactome: R-HSA-2160916 "Other glycan degradation";"Chitin degradation III (Serratia)";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Chitin degradation II (Vibrio)";"Glycosaminoglycan degradation";"Various types of N-glycan biosynthesis";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Amino sugar and nucleotide sugar metabolism";"CS/DS degradation";"Glycosphingolipid metabolism";"Keratan sulfate degradation";"Hyaluronan uptake and degradation" CFLO002101-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO013994-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" CFLO017263-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO006070-PA 3 Reactome: R-HSA-9609736;Reactome: R-HSA-6794361;Reactome: R-HSA-212676 "Assembly and cell surface presentation of NMDA receptors";"Neurexins and neuroligins";"Dopamine Neurotransmitter Release Cycle" CFLO010485-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" CFLO000152-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO006249-PA 1 MetaCyc: PWY-7533 "Gliotoxin biosynthesis" CFLO010925-PA 3 Reactome: R-HSA-8866654;Reactome: R-HSA-9033241;Reactome: R-HSA-9603798 "E3 ubiquitin ligases ubiquitinate target proteins";"Peroxisomal protein import";"Class I peroxisomal membrane protein import" CFLO007718-PA 56 Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323 "G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"MAPK6/MAPK4 signaling";"Degradation of DVL";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling" CFLO002713-PA 1 Reactome: R-HSA-427359 "SIRT1 negatively regulates rRNA expression" CFLO015233-PA 4 KEGG: 00750+1.4.3.5;Reactome: R-HSA-964975;MetaCyc: PWY-7204;MetaCyc: PWY-7282 "Vitamin B6 metabolism";"Vitamins B6 activation to pyridoxal phosphate";"Pyridoxal 5'-phosphate salvage II (plants)";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis" CFLO010397-PA 2 Reactome: R-HSA-392154;Reactome: R-HSA-1222556 "Nitric oxide stimulates guanylate cyclase";"ROS and RNS production in phagocytes" CFLO000410-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO010638-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" CFLO012352-PA 3 Reactome: R-HSA-416482;Reactome: R-HSA-193648;Reactome: R-HSA-194840 "G alpha (12/13) signalling events";"NRAGE signals death through JNK";"Rho GTPase cycle" CFLO009913-PA 3 MetaCyc: PWY-6596;KEGG: 00230+3.5.4.6;Reactome: R-HSA-74217 "Adenosine nucleotides degradation I";"Purine metabolism";"Purine salvage" CFLO011980-PA 7 Reactome: R-HSA-165181;Reactome: R-HSA-5674400;Reactome: R-HSA-8854214;Reactome: R-HSA-198323;Reactome: R-HSA-5628897;Reactome: R-HSA-380972;Reactome: R-HSA-1632852 "Inhibition of TSC complex formation by PKB";"Constitutive Signaling by AKT1 E17K in Cancer";"TBC/RABGAPs";"AKT phosphorylates targets in the cytosol";"TP53 Regulates Metabolic Genes";"Energy dependent regulation of mTOR by LKB1-AMPK";"Macroautophagy" CFLO014027-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO002164-PA 1 Reactome: R-HSA-71288 "Creatine metabolism" CFLO017235-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO006680-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO017947-PA 10 Reactome: R-HSA-72731;Reactome: R-HSA-72702;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-382556;Reactome: R-HSA-72706;Reactome: R-HSA-9648895;Reactome: R-HSA-381042;Reactome: R-HSA-9633012 "Recycling of eIF2:GDP";"Ribosomal scanning and start codon recognition";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"ABC-family proteins mediated transport";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Response of EIF2AK1 (HRI) to heme deficiency";"PERK regulates gene expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency" CFLO000045-PA 5 Reactome: R-HSA-68949;Reactome: R-HSA-68867;Reactome: R-HSA-68827;Reactome: R-HSA-69205;Reactome: R-HSA-68962 "Orc1 removal from chromatin";"Assembly of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"G1/S-Specific Transcription";"Activation of the pre-replicative complex" CFLO002002-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" CFLO003316-PA 3 Reactome: R-HSA-5358493;MetaCyc: PWY-7546;MetaCyc: PWY-6482 "Synthesis of diphthamide-EEF2";"Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)" CFLO014187-PA 3 Reactome: R-HSA-2151201;Reactome: R-HSA-6798695;Reactome: R-HSA-8964539 "Transcriptional activation of mitochondrial biogenesis";"Neutrophil degranulation";"Glutamate and glutamine metabolism" CFLO001049-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO018557-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO018650-PA 7 Reactome: R-HSA-389957;Reactome: R-HSA-6814122;Reactome: R-HSA-390471;Reactome: R-HSA-5620922;Reactome: R-HSA-389960;Reactome: R-HSA-6798695;Reactome: R-HSA-390450 "Prefoldin mediated transfer of substrate to CCT/TriC";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Association of TriC/CCT with target proteins during biosynthesis";"BBSome-mediated cargo-targeting to cilium";"Formation of tubulin folding intermediates by CCT/TriC";"Neutrophil degranulation";"Folding of actin by CCT/TriC" CFLO011185-PA 6 MetaCyc: PWY-7442;MetaCyc: PWY-6606;Reactome: R-HSA-74259;KEGG: 00230+3.5.4.3;MetaCyc: PWY-5497;MetaCyc: PWY-6608 "Drosopterin and aurodrosopterin biosynthesis";"Guanosine nucleotides degradation II";"Purine catabolism";"Purine metabolism";"Purine nucleobases degradation II (anaerobic)";"Guanosine nucleotides degradation III" CFLO015907-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO013757-PA 5 Reactome: R-HSA-9608290;Reactome: R-HSA-9608287;Reactome: R-HSA-110330;Reactome: R-HSA-110331;Reactome: R-HSA-110357 "Defective MUTYH substrate processing";"Defective MUTYH substrate binding";"Recognition and association of DNA glycosylase with site containing an affected purine";"Cleavage of the damaged purine";"Displacement of DNA glycosylase by APEX1" CFLO011430-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO014040-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO019817-PA 1 MetaCyc: PWY-7533 "Gliotoxin biosynthesis" CFLO018830-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO015264-PA 5 Reactome: R-HSA-532668;MetaCyc: PWY-7918;MetaCyc: PWY-7919;Reactome: R-HSA-4793954;KEGG: 00510+3.2.1.106 "N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Protein N-glycosylation processing phase (yeast)";"Protein N-glycosylation processing phase (plants and animals)";"Defective MOGS causes MOGS-CDG (CDG-2b)";"N-Glycan biosynthesis" CFLO008090-PA 27 Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-3301854;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-5578749;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-168333;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-168276 "SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Nuclear Pore Complex (NPC) Disassembly";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Transcriptional regulation by small RNAs";"snRNP Assembly";"HCMV Late Events";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways" CFLO004166-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO009751-PA 9 MetaCyc: PWY-6901;Reactome: R-HSA-70263;Reactome: R-HSA-70171;KEGG: 00710+1.2.1.12;MetaCyc: PWY-1042;MetaCyc: PWY-7003;KEGG: 00010+1.2.1.12;MetaCyc: PWY-8004;MetaCyc: PWY-5484 "Superpathway of glucose and xylose degradation";"Gluconeogenesis";"Glycolysis";"Carbon fixation in photosynthetic organisms";"Glycolysis IV (plant cytosol)";"Glycerol degradation to butanol";"Glycolysis / Gluconeogenesis";"Entner-Doudoroff pathway I";"Glycolysis II (from fructose 6-phosphate)" CFLO018097-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO018074-PA 4 Reactome: R-HSA-9033241;KEGG: 00410+4.1.1.9;KEGG: 00640+4.1.1.9;Reactome: R-HSA-390247 "Peroxisomal protein import";"beta-Alanine metabolism";"Propanoate metabolism";"Beta-oxidation of very long chain fatty acids" CFLO011293-PA 3 Reactome: R-HSA-191859;Reactome: R-HSA-3214858;Reactome: R-HSA-6804760 "snRNP Assembly";"RMTs methylate histone arginines";"Regulation of TP53 Activity through Methylation" CFLO005159-PA 1 Reactome: R-HSA-1483148 "Synthesis of PG" CFLO018892-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO007711-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO016846-PA 33 MetaCyc: PWY-7013;MetaCyc: PWY-5480;MetaCyc: PWY-5057;MetaCyc: PWY-7798;KEGG: 00980+1.1.1.1;MetaCyc: PWY-6802;MetaCyc: PWY-6871;KEGG: 00626+1.1.1.1;MetaCyc: PWY-6587;MetaCyc: PWY-7118;KEGG: 00680+1.1.1.284;Reactome: R-HSA-71384;MetaCyc: PWY-5486;KEGG: 00071+1.1.1.1;MetaCyc: PWY-6342;KEGG: 00830+1.1.1.1;KEGG: 00592+1.1.1.1;MetaCyc: PWY-6333;KEGG: 00982+1.1.1.1;MetaCyc: PWY-5076;KEGG: 00625+1.1.1.1;MetaCyc: PWY-7111;MetaCyc: PWY-5751;MetaCyc: PWY-5079;KEGG: 00260+1.1.1.1;MetaCyc: PWY-5082;MetaCyc: PWY-1801;KEGG: 00350+1.1.1.1;MetaCyc: PWY-7396;MetaCyc: PWY-5078;MetaCyc: PWY-6313;MetaCyc: PWY-3162;KEGG: 00010+1.1.1.1 "(S)-propane-1,2-diol degradation";"Pyruvate fermentation to ethanol I";"L-valine degradation II";"Protein S-nitrosylation and denitrosylation";"Metabolism of xenobiotics by cytochrome P450";"Salidroside biosynthesis";"3-methylbutanol biosynthesis (engineered)";"Naphthalene degradation";"Pyruvate fermentation to ethanol III";"Chitin degradation to ethanol";"Methane metabolism";"Ethanol oxidation";"Pyruvate fermentation to ethanol II";"Fatty acid degradation";"Noradrenaline and adrenaline degradation";"Retinol metabolism";"alpha-Linolenic acid metabolism";"Acetaldehyde biosynthesis I";"Drug metabolism - cytochrome P450";"L-leucine degradation III";"Chloroalkane and chloroalkene degradation";"Pyruvate fermentation to isobutanol (engineered)";"Phenylethanol biosynthesis";"L-phenylalanine degradation III";"Glycine, serine and threonine metabolism";"L-methionine degradation III";"Formaldehyde oxidation II (glutathione-dependent)";"Tyrosine metabolism";"Butanol and isobutanol biosynthesis (engineered)";"L-isoleucine degradation II";"Serotonin degradation";"L-tryptophan degradation V (side chain pathway)";"Glycolysis / Gluconeogenesis" CFLO016413-PA 2 Reactome: R-HSA-446203;Reactome: R-HSA-1799339 "Asparagine N-linked glycosylation";"SRP-dependent cotranslational protein targeting to membrane" CFLO006007-PA 30 Reactome: R-HSA-8951664;Reactome: R-HSA-174113;Reactome: R-HSA-5610783;Reactome: R-HSA-983168;Reactome: R-HSA-917937;Reactome: R-HSA-69231;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-2644607;Reactome: R-HSA-202424;Reactome: R-HSA-180534;Reactome: R-HSA-5684264;Reactome: R-HSA-2122947;Reactome: R-HSA-2871837;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-8939902;Reactome: R-HSA-2894862;Reactome: R-HSA-1169091;Reactome: R-HSA-187577;Reactome: R-HSA-195253;Reactome: R-HSA-8854050;Reactome: R-HSA-1170546;Reactome: R-HSA-5610780;Reactome: R-HSA-400253;Reactome: R-HSA-2644606;Reactome: R-HSA-2565942;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-5610785 "Neddylation";"SCF-beta-TrCP mediated degradation of Emi1";"Degradation of GLI2 by the proteasome";"Antigen processing: Ubiquitination & Proteasome degradation";"Iron uptake and transport";"Cyclin D associated events in G1";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling";"Downstream TCR signaling";"Vpu mediated degradation of CD4";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"NOTCH1 Intracellular Domain Regulates Transcription";"FCERI mediated NF-kB activation";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Regulation of RUNX2 expression and activity";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Activation of NF-kappaB in B cells";"SCF(Skp2)-mediated degradation of p27/p21";"Degradation of beta-catenin by the destruction complex";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Prolactin receptor signaling";"Degradation of GLI1 by the proteasome";"Circadian Clock";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Regulation of PLK1 Activity at G2/M Transition";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"GLI3 is processed to GLI3R by the proteasome" CFLO018848-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO016512-PA 8 Reactome: R-HSA-212300;Reactome: R-HSA-9609690;Reactome: R-HSA-3214841;Reactome: R-HSA-2559580;Reactome: R-HSA-8943724;Reactome: R-HSA-8953750;Reactome: R-HSA-4551638;Reactome: R-HSA-5617472 "PRC2 methylates histones and DNA";"HCMV Early Events";"PKMTs methylate histone lysines";"Oxidative Stress Induced Senescence";"Regulation of PTEN gene transcription";"Transcriptional Regulation by E2F6";"SUMOylation of chromatin organization proteins";"Activation of anterior HOX genes in hindbrain development during early embryogenesis" CFLO002420-PA 4 Reactome: R-HSA-5358493;Reactome: R-HSA-8849175;MetaCyc: PWY-7546;MetaCyc: PWY-6482 "Synthesis of diphthamide-EEF2";"Threonine catabolism";"Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)" CFLO003228-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO000132-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO005379-PA 18 Reactome: R-HSA-1482922;MetaCyc: PWY-8053;Reactome: R-HSA-1482925;MetaCyc: PWY-8051;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482788;Reactome: R-HSA-1482839;MetaCyc: PWY-7417;MetaCyc: PWY-7783;Reactome: R-HSA-1482801;MetaCyc: PWY-7409;KEGG: 00590+3.1.1.4;MetaCyc: PWY-7416;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;KEGG: 00591+3.1.1.4;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166 "Acyl chain remodelling of PI";"Anandamide biosynthesis II";"Acyl chain remodelling of PG";"Anandamide biosynthesis I";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PC";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)";"Plasmalogen degradation";"Acyl chain remodelling of PS";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Arachidonic acid metabolism";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Linoleic acid metabolism";"Ether lipid metabolism";"Synthesis of PA" CFLO000049-PA 1 Reactome: R-HSA-197264 "Nicotinamide salvaging" CFLO002995-PA 8 KEGG: 00515+2.4.1.109;Reactome: R-HSA-5083633;KEGG: 00514+2.4.1.109;Reactome: R-HSA-5173105;MetaCyc: PWY-7921;MetaCyc: PWY-7922;Reactome: R-HSA-5083629;MetaCyc: PWY-7979 "Mannose type O-glycan biosynthesis";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1";"Other types of O-glycan biosynthesis";"O-linked glycosylation";"Protein O-mannosylation I (yeast)";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Protein O-mannosylation III (mammals, core M3)" CFLO012591-PA 18 MetaCyc: PWY-7198;MetaCyc: PWY-7187;MetaCyc: PWY-7222;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7210;MetaCyc: PWY-7176;MetaCyc: PWY-6545;MetaCyc: PWY-7197;KEGG: 00230+2.7.4.6;MetaCyc: PWY-7205;MetaCyc: PWY-7227;MetaCyc: PWY-7221;MetaCyc: PWY-7224;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7184;Reactome: R-HSA-499943;MetaCyc: PWY-7226;MetaCyc: PWY-7220 "Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotide phosphorylation";"Purine metabolism";"CMP phosphorylation";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine ribonucleotides de novo biosynthesis";"Purine deoxyribonucleosides salvage";"Drug metabolism - other enzymes";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Interconversion of nucleotide di- and triphosphates";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis II" CFLO011441-PA 2 Reactome: R-HSA-2142753;KEGG: 00970+6.3.5.7 "Arachidonic acid metabolism";"Aminoacyl-tRNA biosynthesis" CFLO017230-PA 4 MetaCyc: PWY-7119;MetaCyc: PWY-6483;Reactome: R-HSA-1660662;KEGG: 00600+3.5.1.23 "Ceramide and sphingolipid recycling and degradation (yeast)";"Ceramide degradation (generic)";"Glycosphingolipid metabolism";"Sphingolipid metabolism" CFLO014024-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO015620-PA 14 MetaCyc: PWY-8051;MetaCyc: PWY-5981;MetaCyc: PWY-8053;MetaCyc: PWY-7589;KEGG: 00564+2.3.1.51;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7411;Reactome: R-HSA-1483166;MetaCyc: PWY-7417;MetaCyc: PWY-7782;MetaCyc: PWY-7587;MetaCyc: PWY-8055;MetaCyc: PWY-5667;MetaCyc: PWY-6453 "Anandamide biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Anandamide biosynthesis II";"Palmitoleate biosynthesis III (cyanobacteria)";"Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)";"Synthesis of PA";"Phospholipid remodeling (phosphatidate, yeast)";"Plasmalogen biosynthesis";"Oleate biosynthesis III (cyanobacteria)";"Palmitoyl ethanolamide biosynthesis";"CDP-diacylglycerol biosynthesis I";"Stigma estolide biosynthesis" CFLO011794-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO008494-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO008721-PA 2 KEGG: 00270+3.1.3.77;Reactome: R-HSA-1237112 "Cysteine and methionine metabolism";"Methionine salvage pathway" CFLO016637-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO002896-PA 1 KEGG: 00970+6.1.1.16 "Aminoacyl-tRNA biosynthesis" CFLO010841-PA 5 Reactome: R-HSA-6798695;Reactome: R-HSA-164843;Reactome: R-HSA-3270619;Reactome: R-HSA-5693571;Reactome: R-HSA-1834949 "Neutrophil degranulation";"2-LTR circle formation";"IRF3-mediated induction of type I IFN";"Nonhomologous End-Joining (NHEJ)";"Cytosolic sensors of pathogen-associated DNA" CFLO006134-PA 3 KEGG: 00260+2.1.2.10;Reactome: R-HSA-6783984;KEGG: 00670+2.1.2.10 "Glycine, serine and threonine metabolism";"Glycine degradation";"One carbon pool by folate" CFLO004004-PA 14 MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-5972;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-7035;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725;KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433 "Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Stearate biosynthesis I (animals)";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"(9Z)-tricosene biosynthesis";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)" CFLO006550-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" CFLO010525-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO019826-PA 1 Reactome: R-HSA-373753 "Nephrin family interactions" CFLO005370-PA 2 Reactome: R-HSA-1268020;Reactome: R-HSA-1482798 "Mitochondrial protein import";"Acyl chain remodeling of CL" CFLO003325-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO002284-PA 4 Reactome: R-HSA-3304356;Reactome: R-HSA-2173789;Reactome: R-HSA-2173788;Reactome: R-HSA-3656532 "SMAD2/3 Phosphorylation Motif Mutants in Cancer";"TGF-beta receptor signaling activates SMADs";"Downregulation of TGF-beta receptor signaling";"TGFBR1 KD Mutants in Cancer" CFLO004577-PA 2 Reactome: R-HSA-8953750;Reactome: R-HSA-8939243 "Transcriptional Regulation by E2F6";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO010057-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" CFLO001388-PA 7 MetaCyc: PWY-6367;MetaCyc: PWY-7039;KEGG: 00562+3.1.4.11;MetaCyc: PWY-6351;Reactome: R-HSA-1855204;MetaCyc: PWY-8052;KEGG: 04070+3.1.4.11 "D-myo-inositol-5-phosphate metabolism";"Phosphatidate metabolism, as a signaling molecule";"Inositol phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis";"Phosphatidylinositol signaling system" CFLO002046-PA 4 Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;MetaCyc: PWY-7375 "RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Mrna capping I" CFLO013230-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-1663150 "Glycosphingolipid metabolism";"The activation of arylsulfatases" CFLO002727-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" CFLO000043-PA 5 Reactome: R-HSA-9648895;Reactome: R-HSA-380994;KEGG: 00250+6.3.5.4;Reactome: R-HSA-9633012;Reactome: R-HSA-8963693 "Response of EIF2AK1 (HRI) to heme deficiency";"ATF4 activates genes in response to endoplasmic reticulum stress";"Alanine, aspartate and glutamate metabolism";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Aspartate and asparagine metabolism" CFLO010929-PA 6 Reactome: R-HSA-450513;Reactome: R-HSA-429958;Reactome: R-HSA-6791226;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-450604 "Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA" CFLO000525-PA 6 Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257 "Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion" CFLO018945-PA 1 Reactome: R-HSA-196819 "Vitamin B1 (thiamin) metabolism" CFLO011975-PA 2 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" CFLO000122-PA 6 Reactome: R-HSA-112382;Reactome: R-HSA-201722;Reactome: R-HSA-8866654;Reactome: R-HSA-5632684;Reactome: R-HSA-75955;Reactome: R-HSA-674695 "Formation of RNA Pol II elongation complex";"Formation of the beta-catenin:TCF transactivating complex";"E3 ubiquitin ligases ubiquitinate target proteins";"Hedgehog 'on' state";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events" CFLO005696-PA 5 Reactome: R-HSA-450604;Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-430039;Reactome: R-HSA-450513 "KSRP (KHSRP) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"mRNA decay by 5' to 3' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA" CFLO007135-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-171319 "HATs acetylate histones";"Telomere Extension By Telomerase" CFLO000026-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO005639-PA 3 MetaCyc: PWY-4361;KEGG: 00270+5.3.1.23;MetaCyc: PWY-7174 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Cysteine and methionine metabolism";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II" CFLO001308-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" CFLO005047-PA 13 MetaCyc: PWY-6902;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7822;KEGG: 00511+3.2.1.52;Reactome: R-HSA-2160916;Reactome: R-HSA-2022857;Reactome: R-HSA-1660662;KEGG: 00603+3.2.1.52;Reactome: R-HSA-2024101;KEGG: 00520+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00531+3.2.1.52 "Chitin degradation II (Vibrio)";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation III (Serratia)";"Other glycan degradation";"Hyaluronan uptake and degradation";"Keratan sulfate degradation";"Glycosphingolipid metabolism";"Glycosphingolipid biosynthesis - globo and isoglobo series";"CS/DS degradation";"Amino sugar and nucleotide sugar metabolism";"Various types of N-glycan biosynthesis";"Glycosaminoglycan degradation" CFLO008703-PA 5 Reactome: R-HSA-73762;Reactome: R-HSA-5250924;Reactome: R-HSA-427413;Reactome: R-HSA-73863;Reactome: R-HSA-73772 "RNA Polymerase I Transcription Initiation";"B-WICH complex positively regulates rRNA expression";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape" CFLO007517-PA 5 KEGG: 00190+7.1.1.8;MetaCyc: PWY-6692;MetaCyc: PWY-3781;MetaCyc: PWY-7279;MetaCyc: PWY-7082 "Oxidative phosphorylation";"Fe(II) oxidation";"Aerobic respiration I (cytochrome c)";"Aerobic respiration II (cytochrome c) (yeast)";"Ammonia oxidation IV (autotrophic ammonia oxidizers)" CFLO015277-PA 1 Reactome: R-HSA-6783984 "Glycine degradation" CFLO000039-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO012806-PA 14 Reactome: R-HSA-8943723;Reactome: R-HSA-9018519;Reactome: R-HSA-426496;Reactome: R-HSA-8986944;Reactome: R-HSA-9029569;Reactome: R-HSA-9022692;Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-203927;Reactome: R-HSA-4086398;Reactome: R-HSA-8934593;Reactome: R-HSA-426486;Reactome: R-HSA-5687128 "Regulation of PTEN mRNA translation";"Estrogen-dependent gene expression";"Post-transcriptional silencing by small RNAs";"Transcriptional Regulation by MECP2";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of MECP2 expression and activity";"Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"MicroRNA (miRNA) biogenesis";"Ca2+ pathway";"Regulation of RUNX1 Expression and Activity";"Small interfering RNA (siRNA) biogenesis";"MAPK6/MAPK4 signaling" CFLO001492-PA 1 Reactome: R-HSA-3214815 "HDACs deacetylate histones" CFLO011550-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO001525-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO009455-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO009451-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO010911-PA 52 Reactome: R-HSA-167152;Reactome: R-HSA-167242;Reactome: R-HSA-76071;Reactome: R-HSA-112382;Reactome: R-HSA-5578749;Reactome: R-HSA-6781823;Reactome: R-HSA-5617472;Reactome: R-HSA-5250924;Reactome: R-HSA-6796648;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-168325;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-73980;Reactome: R-HSA-6781827;Reactome: R-HSA-8851708;Reactome: R-HSA-75953;Reactome: R-HSA-6782210;Reactome: R-HSA-6803529;Reactome: R-HSA-203927;Reactome: R-HSA-167172;Reactome: R-HSA-1834949;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-73776;Reactome: R-HSA-72165;Reactome: R-HSA-76066;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-76061;Reactome: R-HSA-5601884;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-9018519;Reactome: R-HSA-73780;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-167287;Reactome: R-HSA-73772;Reactome: R-HSA-75955;Reactome: R-HSA-73863;Reactome: R-HSA-749476;Reactome: R-HSA-427413;Reactome: R-HSA-167162 "Formation of HIV elongation complex in the absence of HIV Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Formation of RNA Pol II elongation complex";"Transcriptional regulation by small RNAs";"Formation of TC-NER Pre-Incision Complex";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"B-WICH complex positively regulates rRNA expression";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Viral Messenger RNA Synthesis";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase III Transcription Termination";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Initiation";"Gap-filling DNA repair synthesis and ligation in TC-NER";"FGFR2 alternative splicing";"MicroRNA (miRNA) biogenesis";"Transcription of the HIV genome";"Cytosolic sensors of pathogen-associated DNA";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Promoter Escape";"mRNA Splicing - Minor Pathway";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"PIWI-interacting RNA (piRNA) biogenesis";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"Estrogen-dependent gene expression";"RNA Polymerase III Chain Elongation";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"HIV elongation arrest and recovery";"RNA Polymerase I Promoter Escape";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Transcription Termination";"RNA Polymerase III Abortive And Retractive Initiation";"NoRC negatively regulates rRNA expression";"RNA Polymerase II HIV Promoter Escape" CFLO006699-PA 1 Reactome: R-HSA-5685939 "HDR through MMEJ (alt-NHEJ)" CFLO003071-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" CFLO000151-PA 18 MetaCyc: PWY-5046;KEGG: 00640+1.8.1.4;MetaCyc: PWY-5084;Reactome: R-HSA-204174;Reactome: R-HSA-71403;KEGG: 00380+1.8.1.4;KEGG: 00260+1.8.1.4;KEGG: 00620+1.8.1.4;Reactome: R-HSA-71064;Reactome: R-HSA-70268;Reactome: R-HSA-70895;KEGG: 00020+1.8.1.4;KEGG: 00010+1.8.1.4;Reactome: R-HSA-5362517;Reactome: R-HSA-6783984;KEGG: 00280+1.8.1.4;Reactome: R-HSA-389661;KEGG: 00310+1.8.1.4 "2-oxoisovalerate decarboxylation to isobutanoyl-CoA";"Propanoate metabolism";"2-oxoglutarate decarboxylation to succinyl-CoA";"Regulation of pyruvate dehydrogenase (PDH) complex";"Citric acid cycle (TCA cycle)";"Tryptophan metabolism";"Glycine, serine and threonine metabolism";"Pyruvate metabolism";"Lysine catabolism";"Pyruvate metabolism";"Branched-chain amino acid catabolism";"Citrate cycle (TCA cycle)";"Glycolysis / Gluconeogenesis";"Signaling by Retinoic Acid";"Glycine degradation";"Valine, leucine and isoleucine degradation";"Glyoxylate metabolism and glycine degradation";"Lysine degradation" CFLO012566-PA 3 Reactome: R-HSA-450385;Reactome: R-HSA-430039;Reactome: R-HSA-450513 "Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"mRNA decay by 5' to 3' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA" CFLO000574-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO009985-PA 11 MetaCyc: PWY-6728;MetaCyc: PWY-7268;KEGG: 00020+1.1.1.42;MetaCyc: PWY-6549;KEGG: 00720+1.1.1.42;KEGG: 00480+1.1.1.42;Reactome: R-HSA-71403;MetaCyc: PWY-7124;MetaCyc: PWY-6969;MetaCyc: PWY-5913;MetaCyc: PWY-7254 "Methylaspartate cycle";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Citrate cycle (TCA cycle)";"L-glutamine biosynthesis III";"Carbon fixation pathways in prokaryotes";"Glutathione metabolism";"Citric acid cycle (TCA cycle)";"Ethylene biosynthesis V (engineered)";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Partial TCA cycle (obligate autotrophs)";"TCA cycle VII (acetate-producers)" CFLO000145-PA 3 Reactome: R-HSA-74259;Reactome: R-HSA-196807;Reactome: R-HSA-73621 "Purine catabolism";"Nicotinate metabolism";"Pyrimidine catabolism" CFLO004994-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO007214-PA 18 KEGG: 00620+1.1.1.37;MetaCyc: PWY-5392;MetaCyc: PWY-1622;KEGG: 00020+1.1.1.37;MetaCyc: PWY-561;KEGG: 00270+1.1.1.37;KEGG: 00680+1.1.1.37;MetaCyc: PWY-7115;Reactome: R-HSA-70263;MetaCyc: PWY-6728;MetaCyc: PWY-5690;MetaCyc: PWY-8086;KEGG: 00720+1.1.1.37;MetaCyc: PWY-5913;MetaCyc: PWY-7383;KEGG: 00630+1.1.1.37;MetaCyc: PWY-6969;KEGG: 00710+1.1.1.37 "Pyruvate metabolism";"Reductive TCA cycle II";"Formaldehyde assimilation I (serine pathway)";"Citrate cycle (TCA cycle)";"Superpathway of glyoxylate cycle and fatty acid degradation";"Cysteine and methionine metabolism";"Methane metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Gluconeogenesis";"Methylaspartate cycle";"TCA cycle II (plants and fungi)";"(S)-lactate fermentation to propanoate, acetate and hydrogen";"Carbon fixation pathways in prokaryotes";"Partial TCA cycle (obligate autotrophs)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Glyoxylate and dicarboxylate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Carbon fixation in photosynthetic organisms" CFLO013251-PA 7 KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1 "Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Human papillomavirus infection";"Thermogenesis" CFLO015466-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO007254-PA 2 KEGG: 00510+2.4.1.256;Reactome: R-HSA-446193 "N-Glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO018084-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" CFLO016889-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO003258-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO004191-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO009623-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" CFLO014104-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO008216-PA 7 MetaCyc: PWY-5466;KEGG: 00940+1.11.1.7;MetaCyc: PWY-6824;MetaCyc: PWY-5461;MetaCyc: PWY-5469;MetaCyc: PWY-7445;MetaCyc: PWY-7214 "Matairesinol biosynthesis";"Phenylpropanoid biosynthesis";"Justicidin B biosynthesis";"Betanidin degradation";"Sesamin biosynthesis";"Luteolin triglucuronide degradation";"Baicalein degradation (hydrogen peroxide detoxification)" CFLO007738-PA 2 Reactome: R-HSA-2022854;Reactome: R-HSA-975577 "Keratan sulfate biosynthesis";"N-Glycan antennae elongation" CFLO015759-PA 3 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603;Reactome: R-HSA-3214847 "DNA Damage Recognition in GG-NER";"UCH proteinases";"HATs acetylate histones" CFLO008701-PA 2 Reactome: R-HSA-1660661;KEGG: 04070+2.7.11.13 "Sphingolipid de novo biosynthesis";"Phosphatidylinositol signaling system" CFLO015617-PA 12 Reactome: R-HSA-205043;Reactome: R-HSA-3928665;Reactome: R-HSA-9017802;Reactome: R-HSA-2979096;Reactome: R-HSA-977225;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2894862;Reactome: R-HSA-193692;Reactome: R-HSA-9013700;Reactome: R-HSA-2122948;Reactome: R-HSA-1251985 "NRIF signals cell death from the nucleus";"EPH-ephrin mediated repulsion of cells";"Noncanonical activation of NOTCH3";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Amyloid fiber formation";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Regulated proteolysis of p75NTR";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Activated NOTCH1 Transmits Signal to the Nucleus";"Nuclear signaling by ERBB4" CFLO010059-PA 1 Reactome: R-HSA-430039 "mRNA decay by 5' to 3' exoribonuclease" CFLO015918-PA 4 Reactome: R-HSA-352230;Reactome: R-HSA-71240;Reactome: R-HSA-210991;Reactome: R-HSA-5660862 "Amino acid transport across the plasma membrane";"Tryptophan catabolism";"Basigin interactions";"Defective SLC7A7 causes lysinuric protein intolerance (LPI)" CFLO010712-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane" CFLO017458-PA 5 Reactome: R-HSA-69473;Reactome: R-HSA-5693571;Reactome: R-HSA-5689901;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565 "G2/M DNA damage checkpoint";"Nonhomologous End-Joining (NHEJ)";"Metalloprotease DUBs";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks" CFLO008445-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" CFLO018092-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-9020702 "Neutrophil degranulation";"Interleukin-1 signaling" CFLO008159-PA 6 MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-5884;MetaCyc: PWY-6733;Reactome: R-HSA-9640463 "Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Wax biosynthesis" CFLO008821-PA 7 MetaCyc: PWY-6367;MetaCyc: PWY-7039;KEGG: 00562+3.1.4.11;MetaCyc: PWY-6351;Reactome: R-HSA-1855204;MetaCyc: PWY-8052;KEGG: 04070+3.1.4.11 "D-myo-inositol-5-phosphate metabolism";"Phosphatidate metabolism, as a signaling molecule";"Inositol phosphate metabolism";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis";"Phosphatidylinositol signaling system" CFLO009757-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO015262-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO017955-PA 3 Reactome: R-HSA-416482;Reactome: R-HSA-193648;Reactome: R-HSA-194840 "G alpha (12/13) signalling events";"NRAGE signals death through JNK";"Rho GTPase cycle" CFLO017716-PA 8 MetaCyc: PWY-2301;MetaCyc: PWY-6580;MetaCyc: PWY-6664;Reactome: R-HSA-1855183;KEGG: 00521+5.5.1.4;MetaCyc: PWY-6372;KEGG: 00562+5.5.1.4;MetaCyc: PWY-4661 "Myo-inositol biosynthesis";"Phosphatidylinositol biosynthesis I (bacteria)";"Di-myo-inositol phosphate biosynthesis";"Synthesis of IP2, IP, and Ins in the cytosol";"Streptomycin biosynthesis";"1D-myo-inositol hexakisphosphate biosynthesis IV (Dictyostelium)";"Inositol phosphate metabolism";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)" CFLO015260-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" CFLO012118-PA 42 KEGG: 00903+4.2.1.17;MetaCyc: PWY-6883;MetaCyc: PWY-1361;KEGG: 00062+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17;MetaCyc: PWY-7606;MetaCyc: PWY-5789;MetaCyc: PWY-7656;MetaCyc: PWY-7778;KEGG: 00720+4.2.1.17+1.1.1.35;KEGG: 00360+4.2.1.17;MetaCyc: PWY-5136;MetaCyc: PWY-6944;KEGG: 00640+4.2.1.17;MetaCyc: PWY-7094;KEGG: 00362+4.2.1.17+1.1.1.35;KEGG: 00380+4.2.1.17+1.1.1.35;KEGG: 00071+4.2.1.17+1.1.1.35;MetaCyc: PWY-6863;KEGG: 00281+4.2.1.17+1.1.1.35;MetaCyc: PWY-6946;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-6435;KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35;KEGG: 00623+1.1.1.35;KEGG: 00930+4.2.1.17+1.1.1.35;MetaCyc: PWY-5138;MetaCyc: PWY-7654;MetaCyc: PWY-7401;MetaCyc: PWY-7216;KEGG: 00410+4.2.1.17;MetaCyc: PWY-6583;MetaCyc: PWY-7007;KEGG: 00592+4.2.1.17;MetaCyc: PWY-7726;MetaCyc: PWY-7779;KEGG: 00280+4.2.1.17+1.1.1.35;MetaCyc: PWY-6945;MetaCyc: PWY-5109;MetaCyc: PWY-5177;KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35;KEGG: 00310+4.2.1.17+1.1.1.35 "Limonene and pinene degradation";"Pyruvate fermentation to butanol II (engineered)";"Benzoyl-coa degradation I (aerobic)";"Fatty acid elongation";"Aminobenzoate degradation";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Spodoptera littoralis pheromone biosynthesis";"2-methylpropene degradation";"Carbon fixation pathways in prokaryotes";"Phenylalanine metabolism";"Fatty acid beta-oxidation II (plant peroxisome)";"Androstenedione degradation";"Propanoate metabolism";"Fatty acid salvage";"Benzoate degradation";"Tryptophan metabolism";"Fatty acid degradation";"Pyruvate fermentation to hexanol (engineered)";"Geraniol degradation";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Butanoate metabolism";"4-hydroxybenzoate biosynthesis III (plants)";"Fatty acid degradation";"Toluene degradation";"Caprolactam degradation";"Fatty acid beta-oxidation IV (unsaturated, even number)";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Crotonate fermentation (to acetate and cyclohexane carboxylate)";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"beta-Alanine metabolism";"Pyruvate fermentation to butanol I";"Methyl ketone biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Methyl tert-butyl ether degradation";"Valine, leucine and isoleucine degradation";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"Fermentation to 2-methylbutanoate";"Glutaryl-coa degradation";"Butanoate metabolism";"Lysine degradation" CFLO010540-PA 2 KEGG: 00480+1.11.1.15;Reactome: R-HSA-3299685 "Glutathione metabolism";"Detoxification of Reactive Oxygen Species" CFLO002918-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" CFLO008020-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" CFLO010927-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO004961-PA 2 Reactome: R-HSA-8963888;Reactome: R-HSA-8866423 "Chylomicron assembly";"VLDL assembly" CFLO010802-PA 17 Reactome: R-HSA-5693579;Reactome: R-HSA-2559586;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-5693571;Reactome: R-HSA-1834949;Reactome: R-HSA-3270619;Reactome: R-HSA-5693548;Reactome: R-HSA-5685939;Reactome: R-HSA-912446;Reactome: R-HSA-6804756;Reactome: R-HSA-5685938;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-69473;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616 "Homologous DNA Pairing and Strand Exchange";"DNA Damage/Telomere Stress Induced Senescence";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Nonhomologous End-Joining (NHEJ)";"Cytosolic sensors of pathogen-associated DNA";"IRF3-mediated induction of type I IFN";"Sensing of DNA Double Strand Breaks";"HDR through MMEJ (alt-NHEJ)";"Meiotic recombination";"Regulation of TP53 Activity through Phosphorylation";"HDR through Single Strand Annealing (SSA)";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"G2/M DNA damage checkpoint";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange" CFLO013783-PA 4 Reactome: R-HSA-2470946;Reactome: R-HSA-2468052;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813 "Cohesin Loading onto Chromatin";"Establishment of Sister Chromatid Cohesion";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids" CFLO011342-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO002286-PA 19 Reactome: R-HSA-3000471;Reactome: R-HSA-3000497;Reactome: R-HSA-3000484;Reactome: R-HSA-432142;Reactome: R-HSA-8964026;Reactome: R-HSA-8964041;Reactome: R-HSA-8964038;Reactome: R-HSA-975634;Reactome: R-HSA-3000480;Reactome: R-HSA-381426;Reactome: R-HSA-8957275;Reactome: R-HSA-8964046;Reactome: R-HSA-8856828;Reactome: R-HSA-8963901;Reactome: R-HSA-5686938;Reactome: R-HSA-8963888;Reactome: R-HSA-202733;Reactome: R-HSA-8866423;Reactome: R-HSA-8856825 "Scavenging by Class B Receptors";"Scavenging by Class H Receptors";"Scavenging by Class F Receptors";"Platelet sensitization by LDL";"Chylomicron clearance";"LDL remodeling";"LDL clearance";"Retinoid metabolism and transport";"Scavenging by Class A Receptors";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Post-translational protein phosphorylation";"VLDL clearance";"Clathrin-mediated endocytosis";"Chylomicron remodeling";"Regulation of TLR by endogenous ligand";"Chylomicron assembly";"Cell surface interactions at the vascular wall";"VLDL assembly";"Cargo recognition for clathrin-mediated endocytosis" CFLO014192-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO009081-PA 30 Reactome: R-HSA-2644606;Reactome: R-HSA-2565942;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5607764;Reactome: R-HSA-187577;Reactome: R-HSA-1169091;Reactome: R-HSA-195253;Reactome: R-HSA-8854050;Reactome: R-HSA-1170546;Reactome: R-HSA-5610780;Reactome: R-HSA-400253;Reactome: R-HSA-180534;Reactome: R-HSA-5684264;Reactome: R-HSA-2871837;Reactome: R-HSA-2122947;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-8939902;Reactome: R-HSA-2894862;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-174113;Reactome: R-HSA-9020702;Reactome: R-HSA-69231;Reactome: R-HSA-917937;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-202424;Reactome: R-HSA-2644607 "Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Regulation of PLK1 Activity at G2/M Transition";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"CLEC7A (Dectin-1) signaling";"SCF(Skp2)-mediated degradation of p27/p21";"Activation of NF-kappaB in B cells";"Degradation of beta-catenin by the destruction complex";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Prolactin receptor signaling";"Degradation of GLI1 by the proteasome";"Circadian Clock";"Vpu mediated degradation of CD4";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"FCERI mediated NF-kB activation";"NOTCH1 Intracellular Domain Regulates Transcription";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Regulation of RUNX2 expression and activity";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Neddylation";"Degradation of GLI2 by the proteasome";"SCF-beta-TrCP mediated degradation of Emi1";"Interleukin-1 signaling";"Cyclin D associated events in G1";"Iron uptake and transport";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Downstream TCR signaling";"Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling" CFLO005722-PA 2 Reactome: R-HSA-196741;Reactome: R-HSA-3359473 "Cobalamin (Cbl, vitamin B12) transport and metabolism";"Defective MMADHC causes methylmalonic aciduria and homocystinuria type cblD" CFLO018633-PA 7 KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1 "PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Human papillomavirus infection";"Thermogenesis";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection" CFLO012166-PA 2 Reactome: R-HSA-9010553;Reactome: R-HSA-975957 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO013402-PA 1 Reactome: R-HSA-9640463 "Wax biosynthesis" CFLO012580-PA 8 Reactome: R-HSA-6798695;Reactome: R-HSA-5683826;MetaCyc: PWY-6611;MetaCyc: PWY-7179;MetaCyc: PWY-7179-1;Reactome: R-HSA-74217;MetaCyc: PWY-6609;KEGG: 00230+3.5.4.4 "Neutrophil degranulation";"Surfactant metabolism";"Adenine and adenosine salvage V";"Purine deoxyribonucleosides degradation I";"Purine deoxyribonucleosides degradation II";"Purine salvage";"Adenine and adenosine salvage III";"Purine metabolism" CFLO009368-PA 12 Reactome: R-HSA-2691232;Reactome: R-HSA-982772;Reactome: R-HSA-193692;Reactome: R-HSA-2894862;Reactome: R-HSA-177929;Reactome: R-HSA-2644606;Reactome: R-HSA-2660826;Reactome: R-HSA-75893;Reactome: R-HSA-1251985;Reactome: R-HSA-5362798;Reactome: R-HSA-1442490;Reactome: R-HSA-2122948 "Constitutive Signaling by NOTCH1 HD Domain Mutants";"Growth hormone receptor signaling";"Regulated proteolysis of p75NTR";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Signaling by EGFR";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"TNF signaling";"Nuclear signaling by ERBB4";"Release of Hh-Np from the secreting cell";"Collagen degradation";"Activated NOTCH1 Transmits Signal to the Nucleus" CFLO007633-PA 11 MetaCyc: PWY-381;MetaCyc: PWY-6964;Reactome: R-HSA-210455;KEGG: 00630+6.3.1.2;KEGG: 00250+6.3.1.2;MetaCyc: PWY-6549;KEGG: 00220+6.3.1.2;KEGG: 00910+6.3.1.2;MetaCyc: PWY-6963;Reactome: R-HSA-8964539;MetaCyc: PWY-5675 "Nitrate reduction II (assimilatory)";"Ammonia assimilation cycle II";"Astrocytic Glutamate-Glutamine Uptake And Metabolism";"Glyoxylate and dicarboxylate metabolism";"Alanine, aspartate and glutamate metabolism";"L-glutamine biosynthesis III";"Arginine biosynthesis";"Nitrogen metabolism";"Ammonia assimilation cycle I";"Glutamate and glutamine metabolism";"Nitrate reduction V (assimilatory)" CFLO005541-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO004321-PA 1 Reactome: R-HSA-977443 "GABA receptor activation" CFLO004207-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" CFLO001010-PA 1 Reactome: R-HSA-977347 "Serine biosynthesis" CFLO015009-PA 1 Reactome: R-HSA-5626467 "RHO GTPases activate IQGAPs" CFLO013898-PA 1 Reactome: R-HSA-400253 "Circadian Clock" CFLO002434-PA 10 Reactome: R-HSA-1855204;Reactome: R-HSA-983231;KEGG: 00562+2.7.1.134+2.7.1.159;Reactome: R-HSA-1855167;MetaCyc: PWY-6366;KEGG: 04070+2.7.1.159;MetaCyc: PWY-6554;MetaCyc: PWY-4661;MetaCyc: PWY-6365;MetaCyc: PWY-6362 "Synthesis of IP3 and IP4 in the cytosol";"Factors involved in megakaryocyte development and platelet production";"Inositol phosphate metabolism";"Synthesis of pyrophosphates in the cytosol";"D-myo-inositol (1,4,5,6)-tetrakisphosphate biosynthesis";"Phosphatidylinositol signaling system";"1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3)";"1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza)";"D-myo-inositol (3,4,5,6)-tetrakisphosphate biosynthesis";"1D-myo-inositol hexakisphosphate biosynthesis II (mammalian)" CFLO016686-PA 1 Reactome: R-HSA-69273 "Cyclin A/B1/B2 associated events during G2/M transition" CFLO014447-PA 4 Reactome: R-HSA-73621;KEGG: 00910+1.4.1.14;MetaCyc: PWY-6963;KEGG: 00250+1.4.1.14 "Pyrimidine catabolism";"Nitrogen metabolism";"Ammonia assimilation cycle I";"Alanine, aspartate and glutamate metabolism" CFLO010952-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO008778-PA 14 MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7036;MetaCyc: PWY-5972;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725;KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433;MetaCyc: PWY-7035 "Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Very long chain fatty acid biosynthesis II";"Stearate biosynthesis I (animals)";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)";"(9Z)-tricosene biosynthesis" CFLO011587-PA 2 KEGG: 00051+2.7.1.105+3.1.3.46;Reactome: R-HSA-9634600 "Fructose and mannose metabolism";"Regulation of glycolysis by fructose 2,6-bisphosphate metabolism" CFLO015983-PA 56 Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-180534;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258 "Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Vpu mediated degradation of CD4";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL" CFLO005918-PA 2 Reactome: R-HSA-917729;Reactome: R-HSA-9610379 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events" CFLO004290-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO018836-PA 8 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-68689;Reactome: R-HSA-113507;Reactome: R-HSA-68949;Reactome: R-HSA-68616 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"CDC6 association with the ORC:origin complex";"E2F-enabled inhibition of pre-replication complex formation";"Orc1 removal from chromatin";"Assembly of the ORC complex at the origin of replication" CFLO014436-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO000436-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO004485-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO006113-PA 1 Reactome: R-HSA-430039 "mRNA decay by 5' to 3' exoribonuclease" CFLO013516-PA 3 KEGG: 00740+3.1.3.2;KEGG: 00730+3.1.3.2;MetaCyc: PWY-6348 "Riboflavin metabolism";"Thiamine metabolism";"Phosphate acquisition" CFLO002885-PA 15 Reactome: R-HSA-167152;Reactome: R-HSA-9603505;Reactome: R-HSA-167242;Reactome: R-HSA-167246;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-167290 "Formation of HIV elongation complex in the absence of HIV Tat";"NTRK3 as a dependence receptor";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Tat-mediated elongation of the HIV-1 transcript";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of HIV elongation" CFLO001053-PA 5 Reactome: R-HSA-1655829;Reactome: R-HSA-204005;Reactome: R-HSA-983170;Reactome: R-HSA-5694530;Reactome: R-HSA-2132295 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"COPII-mediated vesicle transport";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Cargo concentration in the ER";"MHC class II antigen presentation" CFLO009082-PA 30 Reactome: R-HSA-2644607;Reactome: R-HSA-202424;Reactome: R-HSA-5676590;Reactome: R-HSA-917937;Reactome: R-HSA-9020702;Reactome: R-HSA-69231;Reactome: R-HSA-983168;Reactome: R-HSA-174113;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-2894862;Reactome: R-HSA-5607761;Reactome: R-HSA-8939902;Reactome: R-HSA-68949;Reactome: R-HSA-2122947;Reactome: R-HSA-2871837;Reactome: R-HSA-5684264;Reactome: R-HSA-180534;Reactome: R-HSA-400253;Reactome: R-HSA-1170546;Reactome: R-HSA-5610780;Reactome: R-HSA-8854050;Reactome: R-HSA-195253;Reactome: R-HSA-1169091;Reactome: R-HSA-187577;Reactome: R-HSA-9604323;Reactome: R-HSA-5610785;Reactome: R-HSA-5607764;Reactome: R-HSA-2644606;Reactome: R-HSA-2565942 "Loss of Function of FBXW7 in Cancer and NOTCH1 Signaling";"Downstream TCR signaling";"NIK-->noncanonical NF-kB signaling";"Iron uptake and transport";"Interleukin-1 signaling";"Cyclin D associated events in G1";"Antigen processing: Ubiquitination & Proteasome degradation";"SCF-beta-TrCP mediated degradation of Emi1";"Degradation of GLI2 by the proteasome";"Neddylation";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RUNX2 expression and activity";"Orc1 removal from chromatin";"NOTCH1 Intracellular Domain Regulates Transcription";"FCERI mediated NF-kB activation";"MAP3K8 (TPL2)-dependent MAPK1/3 activation";"Vpu mediated degradation of CD4";"Circadian Clock";"Prolactin receptor signaling";"Degradation of GLI1 by the proteasome";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Degradation of beta-catenin by the destruction complex";"Activation of NF-kappaB in B cells";"SCF(Skp2)-mediated degradation of p27/p21";"Negative regulation of NOTCH4 signaling";"GLI3 is processed to GLI3R by the proteasome";"CLEC7A (Dectin-1) signaling";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Regulation of PLK1 Activity at G2/M Transition" CFLO007521-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO016646-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO018451-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO005901-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO003184-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO004440-PA 2 MetaCyc: PWY-7800;MetaCyc: PWY-7799 "Ac/N-end rule pathway";"Arg/N-end rule pathway (eukaryotic)" CFLO015640-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" CFLO008877-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" CFLO001797-PA 4 Reactome: R-HSA-350054;Reactome: R-HSA-2894862;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606 "Notch-HLH transcription pathway";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants" CFLO009573-PA 1 Reactome: R-HSA-390522 "Striated Muscle Contraction" CFLO014527-PA 5 Reactome: R-HSA-450321;Reactome: R-HSA-2559580;KEGG: 04150+2.7.11.24;Reactome: R-HSA-450341;Reactome: R-HSA-2871796 "JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1";"Oxidative Stress Induced Senescence";"mTOR signaling pathway";"Activation of the AP-1 family of transcription factors";"FCERI mediated MAPK activation" CFLO003046-PA 2 MetaCyc: PWY-6854;Reactome: R-HSA-3299685 "Ethylene biosynthesis III (microbes)";"Detoxification of Reactive Oxygen Species" CFLO012348-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO014362-PA 6 Reactome: R-HSA-72706;Reactome: R-HSA-72649;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-72695;Reactome: R-HSA-156827 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Translation initiation complex formation";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO018165-PA 3 Reactome: R-HSA-8957275;Reactome: R-HSA-381426;Reactome: R-HSA-381038 "Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"XBP1(S) activates chaperone genes" CFLO002413-PA 6 Reactome: R-HSA-181429;Reactome: R-HSA-181430;Reactome: R-HSA-212676;Reactome: R-HSA-388844;Reactome: R-HSA-210500;Reactome: R-HSA-264642 "Serotonin Neurotransmitter Release Cycle";"Norepinephrine Neurotransmitter Release Cycle";"Dopamine Neurotransmitter Release Cycle";"Receptor-type tyrosine-protein phosphatases";"Glutamate Neurotransmitter Release Cycle";"Acetylcholine Neurotransmitter Release Cycle" CFLO005651-PA 11 Reactome: R-HSA-5693568;Reactome: R-HSA-5693607;Reactome: R-HSA-69473;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554;Reactome: R-HSA-6804756;Reactome: R-HSA-5685938;Reactome: R-HSA-5358606;Reactome: R-HSA-5693579;Reactome: R-HSA-5358565;Reactome: R-HSA-5685942 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Processing of DNA double-strand break ends";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Regulation of TP53 Activity through Phosphorylation";"HDR through Single Strand Annealing (SSA)";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Homologous DNA Pairing and Strand Exchange";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"HDR through Homologous Recombination (HRR)" CFLO000669-PA 1 Reactome: R-HSA-212300 "PRC2 methylates histones and DNA" CFLO002374-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" CFLO017578-PA 1 Reactome: R-HSA-3108214 "SUMOylation of DNA damage response and repair proteins" CFLO010203-PA 5 KEGG: 00230+3.6.1.6;KEGG: 00240+3.6.1.6;Reactome: R-HSA-6798695;MetaCyc: PWY-7185;MetaCyc: PWY-7210 "Purine metabolism";"Pyrimidine metabolism";"Neutrophil degranulation";"UTP and CTP dephosphorylation I";"Pyrimidine deoxyribonucleotides biosynthesis from CTP" CFLO013983-PA 6 Reactome: R-HSA-975578;KEGG: 00513+2.4.1.143;KEGG: 00510+2.4.1.143;Reactome: R-HSA-4793952;MetaCyc: PWY-7426;MetaCyc: PWY-7920 "Reactions specific to the complex N-glycan synthesis pathway";"Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Defective MGAT2 causes MGAT2-CDG (CDG-2a)";"Complex N-linked glycan biosynthesis (vertebrates)";"Complex N-linked glycan biosynthesis (plants)" CFLO007516-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" CFLO015854-PA 2 Reactome: R-HSA-389661;Reactome: R-HSA-9033241 "Glyoxylate metabolism and glycine degradation";"Peroxisomal protein import" CFLO013733-PA 4 Reactome: R-HSA-5362768;Reactome: R-HSA-5358346;Reactome: R-HSA-382556;Reactome: R-HSA-5678895 "Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Hedgehog ligand biogenesis";"ABC-family proteins mediated transport";"Defective CFTR causes cystic fibrosis" CFLO009626-PA 2 Reactome: R-HSA-5693554;Reactome: R-HSA-2564830 "Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Cytosolic iron-sulfur cluster assembly" CFLO014456-PA 6 Reactome: R-HSA-400253;Reactome: R-HSA-163560;Reactome: R-HSA-2173788;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "Circadian Clock";"Triglyceride catabolism";"Downregulation of TGF-beta receptor signaling";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" CFLO004712-PA 2 MetaCyc: PWY-5041;KEGG: 00270+3.3.1.1 "S-adenosyl-L-methionine cycle II";"Cysteine and methionine metabolism" CFLO007063-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" CFLO002800-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO018058-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO012686-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO007391-PA 42 Reactome: R-HSA-3214841;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-201722;Reactome: R-HSA-3214858;Reactome: R-HSA-1912408;Reactome: R-HSA-3214847;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-8939236;Reactome: R-HSA-2559582;Reactome: R-HSA-606279;Reactome: R-HSA-73728;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638;Reactome: R-HSA-110330;Reactome: R-HSA-3214842;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-2559580;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-427359;Reactome: R-HSA-69473;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-9616222;Reactome: R-HSA-73772;Reactome: R-HSA-427389;Reactome: R-HSA-912446;Reactome: R-HSA-427413;Reactome: R-HSA-5693571;Reactome: R-HSA-110329;Reactome: R-HSA-1221632 "PKMTs methylate histone lysines";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"Formation of the beta-catenin:TCF transactivating complex";"RMTs methylate histone arginines";"Pre-NOTCH Transcription and Translation";"HATs acetylate histones";"Amyloid fiber formation";"Cleavage of the damaged purine";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Senescence-Associated Secretory Phenotype (SASP)";"Deposition of new CENPA-containing nucleosomes at the centromere";"RNA Polymerase I Promoter Opening";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins";"Recognition and association of DNA glycosylase with site containing an affected purine";"HDMs demethylate histones";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Oxidative Stress Induced Senescence";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"SIRT1 negatively regulates rRNA expression";"G2/M DNA damage checkpoint";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"HCMV Early Events";"Packaging Of Telomere Ends";"Transcriptional regulation of granulopoiesis";"RNA Polymerase I Promoter Escape";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Meiotic recombination";"NoRC negatively regulates rRNA expression";"Nonhomologous End-Joining (NHEJ)";"Cleavage of the damaged pyrimidine";"Meiotic synapsis" CFLO009585-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO006234-PA 2 Reactome: R-HSA-975957;Reactome: R-HSA-975956 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO006509-PA 1 Reactome: R-HSA-5656169 "Termination of translesion DNA synthesis" CFLO011589-PA 3 Reactome: R-HSA-5358565;Reactome: R-HSA-5632928;Reactome: R-HSA-5632968 "Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Defective Mismatch Repair Associated With MSH2";"Defective Mismatch Repair Associated With MSH6" CFLO013266-PA 2 Reactome: R-HSA-70921;KEGG: 00340+2.1.1.22 "Histidine catabolism";"Histidine metabolism" CFLO012641-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO019853-PA 19 Reactome: R-HSA-8964046;Reactome: R-HSA-8856828;Reactome: R-HSA-381426;Reactome: R-HSA-3000480;Reactome: R-HSA-8957275;Reactome: R-HSA-975634;Reactome: R-HSA-8964038;Reactome: R-HSA-8964041;Reactome: R-HSA-8964026;Reactome: R-HSA-432142;Reactome: R-HSA-3000484;Reactome: R-HSA-3000497;Reactome: R-HSA-3000471;Reactome: R-HSA-8856825;Reactome: R-HSA-8866423;Reactome: R-HSA-202733;Reactome: R-HSA-8963888;Reactome: R-HSA-5686938;Reactome: R-HSA-8963901 "VLDL clearance";"Clathrin-mediated endocytosis";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Scavenging by Class A Receptors";"Post-translational protein phosphorylation";"Retinoid metabolism and transport";"LDL clearance";"LDL remodeling";"Chylomicron clearance";"Platelet sensitization by LDL";"Scavenging by Class F Receptors";"Scavenging by Class H Receptors";"Scavenging by Class B Receptors";"Cargo recognition for clathrin-mediated endocytosis";"VLDL assembly";"Cell surface interactions at the vascular wall";"Chylomicron assembly";"Regulation of TLR by endogenous ligand";"Chylomicron remodeling" CFLO006772-PA 1 Reactome: R-HSA-1660662 "Glycosphingolipid metabolism" CFLO000648-PA 1 Reactome: R-HSA-4551638 "SUMOylation of chromatin organization proteins" CFLO018666-PA 3 Reactome: R-HSA-5696394;Reactome: R-HSA-5689877;Reactome: R-HSA-5696395 "DNA Damage Recognition in GG-NER";"Josephin domain DUBs";"Formation of Incision Complex in GG-NER" CFLO002610-PA 7 Reactome: R-HSA-380270;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-8854518 "Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2" CFLO002733-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-73856;Reactome: R-HSA-72187 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination";"mRNA 3'-end processing" CFLO008680-PA 26 Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-174414;Reactome: R-HSA-5696397;Reactome: R-HSA-5358606;Reactome: R-HSA-4615885;Reactome: R-HSA-69205;Reactome: R-HSA-1362277;Reactome: R-HSA-174411;Reactome: R-HSA-5358565;Reactome: R-HSA-5656169;Reactome: R-HSA-69166;Reactome: R-HSA-5655862;Reactome: R-HSA-6804114;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-6782135;Reactome: R-HSA-174437;Reactome: R-HSA-5696400;Reactome: R-HSA-110312;Reactome: R-HSA-8866654;Reactome: R-HSA-69183;Reactome: R-HSA-5656121;Reactome: R-HSA-5651801;Reactome: R-HSA-174417;Reactome: R-HSA-69091 "Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Processive synthesis on the C-strand of the telomere";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"SUMOylation of DNA replication proteins";"G1/S-Specific Transcription";"Transcription of E2F targets under negative control by DREAM complex";"Polymerase switching on the C-strand of the telomere";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Termination of translesion DNA synthesis";"Removal of the Flap Intermediate";"Translesion synthesis by POLK";"TP53 Regulates Transcription of Genes Involved in G2 Cell Cycle Arrest";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"Dual incision in TC-NER";"Removal of the Flap Intermediate from the C-strand";"Dual Incision in GG-NER";"Translesion synthesis by REV1";"E3 ubiquitin ligases ubiquitinate target proteins";"Processive synthesis on the lagging strand";"Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair";"Telomere C-strand (Lagging Strand) Synthesis";"Polymerase switching" CFLO012023-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO013450-PA 4 Reactome: R-HSA-4641257;Reactome: R-HSA-5689880;Reactome: R-HSA-201681;Reactome: R-HSA-418594 "Degradation of AXIN";"Ub-specific processing proteases";"TCF dependent signaling in response to WNT";"G alpha (i) signalling events" CFLO012611-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" CFLO002793-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440 "Intra-Golgi traffic";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network" CFLO002901-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation" CFLO004787-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO006710-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO003306-PA 18 KEGG: 00350+2.6.1.1;MetaCyc: PWY-7115;KEGG: 00401+2.6.1.1;KEGG: 00250+2.6.1.1;MetaCyc: PWY-6638;MetaCyc: PWY-5913;KEGG: 00400+2.6.1.1;MetaCyc: PWY-7383;KEGG: 00360+2.6.1.1;KEGG: 00270+2.6.1.1;MetaCyc: PWY-6642;KEGG: 00960+2.6.1.1;KEGG: 00330+2.6.1.1;KEGG: 00710+2.6.1.1;MetaCyc: PWY-7117;KEGG: 00220+2.6.1.1;MetaCyc: PWY-6643;KEGG: 00950+2.6.1.1 "Tyrosine metabolism";"C4 photosynthetic carbon assimilation cycle, NAD-ME type";"Novobiocin biosynthesis";"Alanine, aspartate and glutamate metabolism";"Sulfolactate degradation III";"Partial TCA cycle (obligate autotrophs)";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Anaerobic energy metabolism (invertebrates, cytosol)";"Phenylalanine metabolism";"Cysteine and methionine metabolism";"(R)-cysteate degradation";"Tropane, piperidine and pyridine alkaloid biosynthesis";"Arginine and proline metabolism";"Carbon fixation in photosynthetic organisms";"C4 photosynthetic carbon assimilation cycle, PEPCK type";"Arginine biosynthesis";"Coenzyme M biosynthesis II";"Isoquinoline alkaloid biosynthesis" CFLO002763-PA 27 Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-5619107;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-168333;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-5578749;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-3108214;Reactome: R-HSA-3301854;Reactome: R-HSA-180746;Reactome: R-HSA-165054;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-159236 "HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"Transcriptional regulation by small RNAs";"snRNP Assembly";"HCMV Late Events";"SUMOylation of DNA damage response and repair proteins";"Nuclear Pore Complex (NPC) Disassembly";"Nuclear import of Rev protein";"Rev-mediated nuclear export of HIV RNA";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO003214-PA 2 MetaCyc: PWY-4261;KEGG: 00561+2.7.1.30 "Glycerol degradation I";"Glycerolipid metabolism" CFLO009841-PA 25 Reactome: R-HSA-2467813;Reactome: R-HSA-9646399;Reactome: R-HSA-380320;Reactome: R-HSA-8852276;Reactome: R-HSA-2500257;Reactome: R-HSA-9648025;Reactome: R-HSA-9619483;Reactome: R-HSA-5663220;Reactome: R-HSA-8955332;Reactome: R-HSA-437239;Reactome: R-HSA-380270;Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-1445148;Reactome: R-HSA-2132295;Reactome: R-HSA-6811434;Reactome: R-HSA-3371497;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-68877;Reactome: R-HSA-5626467;Reactome: R-HSA-9609736;Reactome: R-HSA-190861;Reactome: R-HSA-6811436;Reactome: R-HSA-9609690 "Separation of Sister Chromatids";"Aggrephagy";"Recruitment of NuMA to mitotic centrosomes";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Resolution of Sister Chromatid Cohesion";"EML4 and NUDC in mitotic spindle formation";"Activation of AMPK downstream of NMDARs";"RHO GTPases Activate Formins";"Carboxyterminal post-translational modifications of tubulin";"Recycling pathway of L1";"Recruitment of mitotic centrosome proteins and complexes";"COPI-mediated anterograde transport";"Kinesins";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"MHC class II antigen presentation";"COPI-dependent Golgi-to-ER retrograde traffic";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Mitotic Prometaphase";"RHO GTPases activate IQGAPs";"Assembly and cell surface presentation of NMDA receptors";"Gap junction assembly";"COPI-independent Golgi-to-ER retrograde traffic";"HCMV Early Events" CFLO016856-PA 1 Reactome: R-HSA-380320 "Recruitment of NuMA to mitotic centrosomes" CFLO013454-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO015979-PA 7 MetaCyc: PWY-5084;Reactome: R-HSA-389661;Reactome: R-HSA-71403;KEGG: 00020+2.3.1.61;Reactome: R-HSA-71064;KEGG: 00380+2.3.1.61;KEGG: 00310+2.3.1.61 "2-oxoglutarate decarboxylation to succinyl-CoA";"Glyoxylate metabolism and glycine degradation";"Citric acid cycle (TCA cycle)";"Citrate cycle (TCA cycle)";"Lysine catabolism";"Tryptophan metabolism";"Lysine degradation" CFLO004726-PA 8 Reactome: R-HSA-68616;Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68689;Reactome: R-HSA-68867;Reactome: R-HSA-68827;Reactome: R-HSA-176187;Reactome: R-HSA-68962 "Assembly of the ORC complex at the origin of replication";"Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"CDC6 association with the ORC:origin complex";"Assembly of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex" CFLO013771-PA 17 Reactome: R-HSA-5358606;Reactome: R-HSA-174411;Reactome: R-HSA-5358565;Reactome: R-HSA-69166;Reactome: R-HSA-5656169;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-174414;Reactome: R-HSA-5696397;Reactome: R-HSA-6782135;Reactome: R-HSA-5685942;Reactome: R-HSA-69183;Reactome: R-HSA-69091;Reactome: R-HSA-174417;Reactome: R-HSA-5651801;Reactome: R-HSA-5696400;Reactome: R-HSA-174437 "Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Polymerase switching on the C-strand of the telomere";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Removal of the Flap Intermediate";"Termination of translesion DNA synthesis";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Processive synthesis on the C-strand of the telomere";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Dual incision in TC-NER";"HDR through Homologous Recombination (HRR)";"Processive synthesis on the lagging strand";"Polymerase switching";"Telomere C-strand (Lagging Strand) Synthesis";"PCNA-Dependent Long Patch Base Excision Repair";"Dual Incision in GG-NER";"Removal of the Flap Intermediate from the C-strand" CFLO010535-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Translation initiation complex formation";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO010058-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO009868-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO011447-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO018180-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO006008-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO008044-PA 4 Reactome: R-HSA-6782861;MetaCyc: PWY-6829;MetaCyc: PWY-7286;MetaCyc: PWY-7285 "Synthesis of wybutosine at G37 of tRNA(Phe)";"Trna methylation (yeast)";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis";"Methylwyosine biosynthesis" CFLO012685-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO000701-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO001994-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO000181-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO019377-PA 10 Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-6804756;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-3214847;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-73779 "RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"Regulation of TP53 Activity through Phosphorylation";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"HATs acetylate histones";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO001064-PA 56 Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5668541;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870 "Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"TNFR2 non-canonical NF-kB pathway";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins" CFLO012035-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO015387-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO000612-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO012620-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO001967-PA 11 Reactome: R-HSA-5685942;Reactome: R-HSA-69166;Reactome: R-HSA-5685938;Reactome: R-HSA-5693579;Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-174437;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-5693568;Reactome: R-HSA-5693607 "HDR through Homologous Recombination (HRR)";"Removal of the Flap Intermediate";"HDR through Single Strand Annealing (SSA)";"Homologous DNA Pairing and Strand Exchange";"Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"Removal of the Flap Intermediate from the C-strand";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Processing of DNA double-strand break ends" CFLO002158-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO010539-PA 18 MetaCyc: PWY-6545;MetaCyc: PWY-7176;MetaCyc: PWY-7197;KEGG: 00230+2.7.4.6;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7210;MetaCyc: PWY-7198;MetaCyc: PWY-7187;MetaCyc: PWY-7222;MetaCyc: PWY-7226;MetaCyc: PWY-7220;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7224;MetaCyc: PWY-7184;Reactome: R-HSA-499943;MetaCyc: PWY-7227;MetaCyc: PWY-7221;MetaCyc: PWY-7205 "Pyrimidine deoxyribonucleotides de novo biosynthesis III";"UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotide phosphorylation";"Purine metabolism";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes";"Purine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Interconversion of nucleotide di- and triphosphates";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine ribonucleotides de novo biosynthesis";"CMP phosphorylation" CFLO004655-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO006606-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO005055-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO007295-PA 5 Reactome: R-HSA-72187;Reactome: R-HSA-77595;Reactome: R-HSA-73856;Reactome: R-HSA-159231;Reactome: R-HSA-72163 "mRNA 3'-end processing";"Processing of Intronless Pre-mRNAs";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA Derived from an Intronless Transcript";"mRNA Splicing - Major Pathway" CFLO019663-PA 14 Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-6787450;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Selenocysteine synthesis";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"tRNA modification in the mitochondrion";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO013985-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO003235-PA 6 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-975957;Reactome: R-HSA-73856;Reactome: R-HSA-72163;Reactome: R-HSA-9010553 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"RNA Polymerase II Transcription Termination";"mRNA Splicing - Major Pathway";"Regulation of expression of SLITs and ROBOs" CFLO014121-PA 3 KEGG: 00052+5.1.3.3;MetaCyc: PWY-6317;KEGG: 00010+5.1.3.3 "Galactose metabolism";"D-galactose degradation I (Leloir pathway)";"Glycolysis / Gluconeogenesis" CFLO001961-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO007609-PA 3 Reactome: R-HSA-5358493;MetaCyc: PWY-7546;MetaCyc: PWY-6482 "Synthesis of diphthamide-EEF2";"Diphthamide biosynthesis II (eukaryotes)";"Diphthamide biosynthesis I (archaea)" CFLO013167-PA 6 MetaCyc: PWY-1861;KEGG: 00030+5.1.3.1;MetaCyc: PWY-5723;KEGG: 00710+5.1.3.1;KEGG: 00040+5.1.3.1;Reactome: R-HSA-71336 "Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Pentose phosphate pathway";"Rubisco shunt";"Carbon fixation in photosynthetic organisms";"Pentose and glucuronate interconversions";"Pentose phosphate pathway" CFLO016901-PA 14 MetaCyc: PWY-5723;MetaCyc: PWY-2221;MetaCyc: PWY-1622;MetaCyc: PWY-6901;KEGG: 00010+4.2.1.11;MetaCyc: PWY-5484;MetaCyc: PWY-8004;MetaCyc: PWY-7124;KEGG: 00680+4.2.1.11;MetaCyc: PWY-6886;MetaCyc: PWY-6142;MetaCyc: PWY-7003;MetaCyc: PWY-7218;MetaCyc: PWY-1042 "Rubisco shunt";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Formaldehyde assimilation I (serine pathway)";"Superpathway of glucose and xylose degradation";"Glycolysis / Gluconeogenesis";"Glycolysis II (from fructose 6-phosphate)";"Entner-Doudoroff pathway I";"Ethylene biosynthesis V (engineered)";"Methane metabolism";"1-butanol autotrophic biosynthesis (engineered)";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycerol degradation to butanol";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Glycolysis IV (plant cytosol)" CFLO004281-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO004227-PA 7 Reactome: R-HSA-380320;Reactome: R-HSA-8854518;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380284;Reactome: R-HSA-380259;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Loss of proteins required for interphase microtubule organization from the centrosome";"Loss of Nlp from mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" CFLO005173-PA 19 Reactome: R-HSA-8964616;Reactome: R-HSA-5687128;Reactome: R-HSA-182971;Reactome: R-HSA-983231;Reactome: R-HSA-418885;Reactome: R-HSA-194840;Reactome: R-HSA-114604;Reactome: R-HSA-3928662;Reactome: R-HSA-5626467;Reactome: R-HSA-428543;Reactome: R-HSA-5625970;Reactome: R-HSA-4420097;Reactome: R-HSA-5627123;Reactome: R-HSA-2029482;Reactome: R-HSA-5663213;Reactome: R-HSA-525793;Reactome: R-HSA-389359;Reactome: R-HSA-5663220;Reactome: R-HSA-8950505 "G beta:gamma signalling through CDC42";"MAPK6/MAPK4 signaling";"EGFR downregulation";"Factors involved in megakaryocyte development and platelet production";"DCC mediated attractive signaling";"Rho GTPase cycle";"GPVI-mediated activation cascade";"EPHB-mediated forward signaling";"RHO GTPases activate IQGAPs";"Inactivation of CDC42 and RAC1";"RHO GTPases activate KTN1";"VEGFA-VEGFR2 Pathway";"RHO GTPases activate PAKs";"Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs";"Myogenesis";"CD28 dependent Vav1 pathway";"RHO GTPases Activate Formins";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" CFLO009465-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" CFLO000972-PA 3 MetaCyc: PWY-2161;Reactome: R-HSA-196757;KEGG: 00790+6.3.2.17 "Folate polyglutamylation";"Metabolism of folate and pterines";"Folate biosynthesis" CFLO002709-PA 1 Reactome: R-HSA-947581 "Molybdenum cofactor biosynthesis" CFLO017979-PA 1 Reactome: R-HSA-72203 "Processing of Capped Intron-Containing Pre-mRNA" CFLO009700-PA 1 Reactome: R-HSA-5419276 "Mitochondrial translation termination" CFLO010975-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" CFLO015987-PA 2 Reactome: R-HSA-388479;Reactome: R-HSA-416476 "Vasopressin-like receptors";"G alpha (q) signalling events" CFLO012584-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-72649;Reactome: R-HSA-156902 "Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Translation initiation complex formation";"Peptide chain elongation" CFLO019451-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" CFLO015666-PA 14 MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-5080;MetaCyc: PWY-5972;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-6598;MetaCyc: PWY-7035;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725 "Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Very long chain fatty acid biosynthesis I";"Stearate biosynthesis I (animals)";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Sciadonate biosynthesis";"(9Z)-tricosene biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)" CFLO000837-PA 1 Reactome: R-HSA-6811436 "COPI-independent Golgi-to-ER retrograde traffic" CFLO003236-PA 56 Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-180534;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702 "Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Vpu mediated degradation of CD4";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling" CFLO004116-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO005676-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" CFLO003349-PA 1 Reactome: R-HSA-2151201 "Transcriptional activation of mitochondrial biogenesis" CFLO000826-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO007382-PA 10 Reactome: R-HSA-1483166;MetaCyc: PWY-7587;MetaCyc: PWY-6453;MetaCyc: PWY-5667;MetaCyc: PWY-8055;MetaCyc: PWY-8051;MetaCyc: PWY-8053;KEGG: 00564+2.3.1.15;KEGG: 00561+2.3.1.15;MetaCyc: PWY-7411 "Synthesis of PA";"Oleate biosynthesis III (cyanobacteria)";"Stigma estolide biosynthesis";"CDP-diacylglycerol biosynthesis I";"Palmitoyl ethanolamide biosynthesis";"Anandamide biosynthesis I";"Anandamide biosynthesis II";"Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)" CFLO011483-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs" CFLO010486-PA 7 Reactome: R-HSA-6807878;Reactome: R-HSA-264870;Reactome: R-HSA-445095;Reactome: R-HSA-6798695;Reactome: R-HSA-5673001;Reactome: R-HSA-375165;Reactome: R-HSA-373753 "COPI-mediated anterograde transport";"Caspase-mediated cleavage of cytoskeletal proteins";"Interaction between L1 and Ankyrins";"Neutrophil degranulation";"RAF/MAP kinase cascade";"NCAM signaling for neurite out-growth";"Nephrin family interactions" CFLO016807-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO016902-PA 12 MetaCyc: PWY-6672;KEGG: 00720+6.2.1.1;MetaCyc: PWY-5108;KEGG: 00630+6.2.1.1;KEGG: 00640+6.2.1.1;MetaCyc: PWY-7857;KEGG: 00010+6.2.1.1;MetaCyc: PWY-5132;KEGG: 00620+6.2.1.1;KEGG: 00680+6.2.1.1;MetaCyc: PWY-5133;MetaCyc: PWY-7118 "Cis-genanyl-coa degradation";"Carbon fixation pathways in prokaryotes";"L-isoleucine biosynthesis V";"Glyoxylate and dicarboxylate metabolism";"Propanoate metabolism";"Adlupulone and adhumulone biosynthesis";"Glycolysis / Gluconeogenesis";"Lupulone and humulone biosynthesis";"Pyruvate metabolism";"Methane metabolism";"Colupulone and cohumulone biosynthesis";"Chitin degradation to ethanol" CFLO009576-PA 16 Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-174184;Reactome: R-HSA-174048;Reactome: R-HSA-174084;Reactome: R-HSA-2559582;Reactome: R-HSA-174154;Reactome: R-HSA-176407;Reactome: R-HSA-983168;Reactome: R-HSA-179409;Reactome: R-HSA-174178;Reactome: R-HSA-176412;Reactome: R-HSA-2467813;Reactome: R-HSA-176409;Reactome: R-HSA-8853884;Reactome: R-HSA-141430 "CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B";"Autodegradation of Cdh1 by Cdh1:APC/C";"Senescence-Associated Secretory Phenotype (SASP)";"APC/C:Cdc20 mediated degradation of Securin";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"Antigen processing: Ubiquitination & Proteasome degradation";"APC-Cdc20 mediated degradation of Nek2A";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Phosphorylation of the APC/C";"Separation of Sister Chromatids";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Transcriptional Regulation by VENTX";"Inactivation of APC/C via direct inhibition of the APC/C complex" CFLO005748-PA 4 MetaCyc: PWY-3722;Reactome: R-HSA-6798163;MetaCyc: PWY-7494;KEGG: 00260+1.2.1.8+1.1.99.1 "Glycine betaine biosynthesis II (Gram-positive bacteria)";"Choline catabolism";"Choline degradation IV";"Glycine, serine and threonine metabolism" CFLO014508-PA 1 Reactome: R-HSA-432722 "Golgi Associated Vesicle Biogenesis" CFLO008862-PA 7 KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1 "mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection" CFLO006783-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO004555-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO002330-PA 2 KEGG: 00970+6.1.1.4;Reactome: R-HSA-379726 "Aminoacyl-tRNA biosynthesis";"Mitochondrial tRNA aminoacylation" CFLO004179-PA 26 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-1445148;Reactome: R-HSA-68877;Reactome: R-HSA-5626467;Reactome: R-HSA-190861;Reactome: R-HSA-9609736;Reactome: R-HSA-6811436;Reactome: R-HSA-9609690;Reactome: R-HSA-389960;Reactome: R-HSA-3371497;Reactome: R-HSA-5617833;Reactome: R-HSA-190840;Reactome: R-HSA-389977;Reactome: R-HSA-9648025;Reactome: R-HSA-9619483;Reactome: R-HSA-2467813;Reactome: R-HSA-9646399;Reactome: R-HSA-380320;Reactome: R-HSA-2500257;Reactome: R-HSA-8852276;Reactome: R-HSA-437239;Reactome: R-HSA-8955332;Reactome: R-HSA-5663220 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport";"Kinesins";"MHC class II antigen presentation";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Mitotic Prometaphase";"RHO GTPases activate IQGAPs";"Gap junction assembly";"Assembly and cell surface presentation of NMDA receptors";"COPI-independent Golgi-to-ER retrograde traffic";"HCMV Early Events";"Formation of tubulin folding intermediates by CCT/TriC";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Cilium Assembly";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Post-chaperonin tubulin folding pathway";"EML4 and NUDC in mitotic spindle formation";"Activation of AMPK downstream of NMDARs";"Separation of Sister Chromatids";"Aggrephagy";"Recruitment of NuMA to mitotic centrosomes";"Resolution of Sister Chromatid Cohesion";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Recycling pathway of L1";"Carboxyterminal post-translational modifications of tubulin";"RHO GTPases Activate Formins" CFLO018241-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO002552-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO000495-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO009636-PA 5 Reactome: R-HSA-9610379;Reactome: R-HSA-162588;Reactome: R-HSA-174490;Reactome: R-HSA-9615710;Reactome: R-HSA-917729 "HCMV Late Events";"Budding and maturation of HIV virion";"Membrane binding and targetting of GAG proteins";"Late endosomal microautophagy";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO007019-PA 15 Reactome: R-HSA-5358752;Reactome: R-HSA-5358749;Reactome: R-HSA-111465;Reactome: R-HSA-5467333;Reactome: R-HSA-5339716;Reactome: R-HSA-3769402;Reactome: R-HSA-4641262;Reactome: R-HSA-5467337;Reactome: R-HSA-5467348;Reactome: R-HSA-5358747;Reactome: R-HSA-195253;Reactome: R-HSA-196299;Reactome: R-HSA-5689896;Reactome: R-HSA-5467340;Reactome: R-HSA-5358751 "T41 mutants of beta-catenin aren't phosphorylated";"S37 mutants of beta-catenin aren't phosphorylated";"Apoptotic cleavage of cellular proteins";"APC truncation mutants are not K63 polyubiquitinated";"Misspliced GSK3beta mutants stabilize beta-catenin";"Deactivation of the beta-catenin transactivating complex";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"APC truncation mutants have impaired AXIN binding";"Truncations of AMER1 destabilize the destruction complex";"S33 mutants of beta-catenin aren't phosphorylated";"Degradation of beta-catenin by the destruction complex";"Beta-catenin phosphorylation cascade";"Ovarian tumor domain proteases";"AXIN missense mutants destabilize the destruction complex";"S45 mutants of beta-catenin aren't phosphorylated" CFLO009369-PA 3 KEGG: 00970+6.1.1.5;Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" CFLO012027-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO007329-PA 9 KEGG: 04151+2.7.11.1;Reactome: R-HSA-5674400;KEGG: 05165+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-198323;KEGG: 05170+2.7.11.1 "PI3K-Akt signaling pathway";"Constitutive Signaling by AKT1 E17K in Cancer";"Human papillomavirus infection";"Human cytomegalovirus infection";"mTOR signaling pathway";"Relaxin signaling pathway";"Thermogenesis";"AKT phosphorylates targets in the cytosol";"Human immunodeficiency virus 1 infection" CFLO000064-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" CFLO006565-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO001625-PA 4 Reactome: R-HSA-418594;Reactome: R-HSA-6814122;Reactome: R-HSA-112043;Reactome: R-HSA-202040 "G alpha (i) signalling events";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"PLC beta mediated events";"G-protein activation" CFLO008192-PA 1 Reactome: R-HSA-5676934 "Protein repair" CFLO002381-PA 1 Reactome: R-HSA-1296061 "HCN channels" CFLO017233-PA 4 MetaCyc: PWY-7119;KEGG: 00600+3.5.1.23;Reactome: R-HSA-1660662;MetaCyc: PWY-6483 "Ceramide and sphingolipid recycling and degradation (yeast)";"Sphingolipid metabolism";"Glycosphingolipid metabolism";"Ceramide degradation (generic)" CFLO004334-PA 2 Reactome: R-HSA-3214841;Reactome: R-HSA-8936459 "PKMTs methylate histone lysines";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function" CFLO016674-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO018375-PA 3 KEGG: 00790+3.1.3.1;KEGG: 00730+3.1.3.1;MetaCyc: PWY-5491 "Folate biosynthesis";"Thiamine metabolism";"Diethylphosphate degradation" CFLO011446-PA 14 Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-203927;Reactome: R-HSA-4086398;Reactome: R-HSA-426486;Reactome: R-HSA-8934593;Reactome: R-HSA-5687128;Reactome: R-HSA-8943723;Reactome: R-HSA-9018519;Reactome: R-HSA-426496;Reactome: R-HSA-8986944;Reactome: R-HSA-9029569;Reactome: R-HSA-9022692 "Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"MicroRNA (miRNA) biogenesis";"Ca2+ pathway";"Small interfering RNA (siRNA) biogenesis";"Regulation of RUNX1 Expression and Activity";"MAPK6/MAPK4 signaling";"Regulation of PTEN mRNA translation";"Estrogen-dependent gene expression";"Post-transcriptional silencing by small RNAs";"Transcriptional Regulation by MECP2";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of MECP2 expression and activity" CFLO014883-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane" CFLO010725-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" CFLO007287-PA 2 Reactome: R-HSA-390522;Reactome: R-HSA-445355 "Striated Muscle Contraction";"Smooth Muscle Contraction" CFLO007134-PA 2 KEGG: 00260+1.4.4.2;Reactome: R-HSA-6783984 "Glycine, serine and threonine metabolism";"Glycine degradation" CFLO000994-PA 12 Reactome: R-HSA-6804756;Reactome: R-HSA-75955;Reactome: R-HSA-167238;Reactome: R-HSA-167290;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-6796648;Reactome: R-HSA-167152 "Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Transcription Elongation";"Pausing and recovery of Tat-mediated HIV elongation";"Pausing and recovery of HIV elongation";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV elongation complex in the absence of HIV Tat" CFLO003072-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO001799-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO015469-PA 52 Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-5607764;Reactome: R-HSA-5668541;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050 "Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"CLEC7A (Dectin-1) signaling";"TNFR2 non-canonical NF-kB pathway";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis" CFLO001095-PA 56 Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-5668541;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-1169091;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-180534;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154 "CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"TNFR2 non-canonical NF-kB pathway";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"Activation of NF-kappaB in B cells";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Vpu mediated degradation of CD4";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin" CFLO010518-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO003575-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO018112-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" CFLO005732-PA 2 Reactome: R-HSA-5673001;Reactome: R-HSA-8853659 "RAF/MAP kinase cascade";"RET signaling" CFLO017608-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO001363-PA 1 Reactome: R-HSA-1971475 "A tetrasaccharide linker sequence is required for GAG synthesis" CFLO012039-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO007237-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO013079-PA 1 Reactome: R-HSA-2465910 "MASTL Facilitates Mitotic Progression" CFLO013426-PA 3 Reactome: R-HSA-110329;Reactome: R-HSA-110357;Reactome: R-HSA-110328 "Cleavage of the damaged pyrimidine";"Displacement of DNA glycosylase by APEX1";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine" CFLO012394-PA 7 KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Thermogenesis";"Human papillomavirus infection";"Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO012983-PA 2 Reactome: R-HSA-426486;Reactome: R-HSA-203927 "Small interfering RNA (siRNA) biogenesis";"MicroRNA (miRNA) biogenesis" CFLO013281-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-72649;Reactome: R-HSA-156902 "Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Translation initiation complex formation";"Peptide chain elongation" CFLO008781-PA 14 MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-5972;MetaCyc: PWY-7724;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;MetaCyc: PWY-7725;Reactome: R-HSA-75876;MetaCyc: PWY-8041;MetaCyc: PWY-7035 "Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Stearate biosynthesis I (animals)";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Synthesis of very long-chain fatty acyl-CoAs";"Ultra-long-chain fatty acid biosynthesis";"(9Z)-tricosene biosynthesis" CFLO005708-PA 1 Reactome: R-HSA-5689877 "Josephin domain DUBs" CFLO015242-PA 11 Reactome: R-HSA-170670;Reactome: R-HSA-418597;Reactome: R-HSA-163359;Reactome: R-HSA-164378;Reactome: R-HSA-432040;Reactome: R-HSA-418555;Reactome: R-HSA-163615;KEGG: 00230+4.6.1.1;Reactome: R-HSA-418594;Reactome: R-HSA-170660;Reactome: R-HSA-5610787 "Adenylate cyclase inhibitory pathway";"G alpha (z) signalling events";"Glucagon signaling in metabolic regulation";"PKA activation in glucagon signalling";"Vasopressin regulates renal water homeostasis via Aquaporins";"G alpha (s) signalling events";"PKA activation";"Purine metabolism";"G alpha (i) signalling events";"Adenylate cyclase activating pathway";"Hedgehog 'off' state" CFLO015291-PA 1 Reactome: R-HSA-8850843 "Phosphate bond hydrolysis by NTPDase proteins" CFLO001921-PA 1 KEGG: 00970+6.1.1.1 "Aminoacyl-tRNA biosynthesis" CFLO013599-PA 3 Reactome: R-HSA-74217;MetaCyc: PWY-6619;KEGG: 00230+2.7.1.20 "Purine salvage";"Adenine and adenosine salvage VI";"Purine metabolism" CFLO001048-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO018829-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO011904-PA 13 Reactome: R-HSA-6802952;KEGG: 05170+2.7.11.1;Reactome: R-HSA-5674135;Reactome: R-HSA-6802946;Reactome: R-HSA-9649948;Reactome: R-HSA-6802955;KEGG: 04714+2.7.11.1;Reactome: R-HSA-6802948;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1 "Signaling by BRAF and RAF fusions";"Human immunodeficiency virus 1 infection";"MAP2K and MAPK activation";"Signaling by moderate kinase activity BRAF mutants";"Signaling downstream of RAS mutants";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Thermogenesis";"Signaling by high-kinase activity BRAF mutants";"mTOR signaling pathway";"Relaxin signaling pathway";"Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway" CFLO007512-PA 2 Reactome: R-HSA-5663220;Reactome: R-HSA-376176 "RHO GTPases Activate Formins";"Signaling by ROBO receptors" CFLO005483-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-212436;Reactome: R-HSA-381340 "PPARA activates gene expression";"Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation" CFLO009564-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" CFLO004646-PA 2 Reactome: R-HSA-1566948;Reactome: R-HSA-2243919 "Elastic fibre formation";"Crosslinking of collagen fibrils" CFLO018655-PA 1 Reactome: R-HSA-9633012 "Response of EIF2AK4 (GCN2) to amino acid deficiency" CFLO005536-PA 5 Reactome: R-HSA-198323;Reactome: R-HSA-165159;Reactome: R-HSA-166208;Reactome: R-HSA-3371571;Reactome: R-HSA-5674400 "AKT phosphorylates targets in the cytosol";"mTOR signalling";"mTORC1-mediated signalling";"HSF1-dependent transactivation";"Constitutive Signaling by AKT1 E17K in Cancer" CFLO015634-PA 10 MetaCyc: PWY-1042;MetaCyc: PWY-7003;KEGG: 00710+2.7.2.3;MetaCyc: PWY-5484;KEGG: 00010+2.7.2.3;MetaCyc: PWY-8004;MetaCyc: PWY-6886;MetaCyc: PWY-6901;Reactome: R-HSA-70171;Reactome: R-HSA-70263 "Glycolysis IV (plant cytosol)";"Glycerol degradation to butanol";"Carbon fixation in photosynthetic organisms";"Glycolysis II (from fructose 6-phosphate)";"Glycolysis / Gluconeogenesis";"Entner-Doudoroff pathway I";"1-butanol autotrophic biosynthesis (engineered)";"Superpathway of glucose and xylose degradation";"Glycolysis";"Gluconeogenesis" CFLO010917-PA 2 MetaCyc: PWY-6829;Reactome: R-HSA-6782315 "Trna methylation (yeast)";"tRNA modification in the nucleus and cytosol" CFLO000310-PA 1 Reactome: R-HSA-2129379 "Molecules associated with elastic fibres" CFLO010227-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO009908-PA 5 Reactome: R-HSA-1655829;Reactome: R-HSA-204005;Reactome: R-HSA-983170;Reactome: R-HSA-5694530;Reactome: R-HSA-2132295 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"COPII-mediated vesicle transport";"Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"Cargo concentration in the ER";"MHC class II antigen presentation" CFLO001995-PA 6 Reactome: R-HSA-912446;Reactome: R-HSA-5632987;Reactome: R-HSA-5545483;Reactome: R-HSA-5358606;Reactome: R-HSA-6796648;Reactome: R-HSA-5358565 "Meiotic recombination";"Defective Mismatch Repair Associated With PMS2";"Defective Mismatch Repair Associated With MLH1";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"TP53 Regulates Transcription of DNA Repair Genes";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)" CFLO010721-PA 1 Reactome: R-HSA-201681 "TCF dependent signaling in response to WNT" CFLO003977-PA 2 Reactome: R-HSA-168276;Reactome: R-HSA-1169408 "NS1 Mediated Effects on Host Pathways";"ISG15 antiviral mechanism" CFLO018667-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" CFLO013095-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO017986-PA 3 MetaCyc: PWY-5698;MetaCyc: PWY-5697;KEGG: 00230+3.5.2.5 "Allantoin degradation to ureidoglycolate II (ammonia producing)";"Allantoin degradation to ureidoglycolate I (urea producing)";"Purine metabolism" CFLO003945-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO008866-PA 1 MetaCyc: PWY-7942 "5-oxo-L-proline metabolism" CFLO013137-PA 3 MetaCyc: PWY-7285;MetaCyc: PWY-7286;MetaCyc: PWY-6829 "Methylwyosine biosynthesis";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis";"Trna methylation (yeast)" CFLO019811-PA 22 MetaCyc: PWY-8013;MetaCyc: PWY-5054;Reactome: R-HSA-70263;MetaCyc: PWY-5659;MetaCyc: PWY-6992;MetaCyc: PWY-5384;MetaCyc: PWY-6981;KEGG: 00500+5.3.1.9;MetaCyc: PWY-7347;MetaCyc: PWY-5514;Reactome: R-HSA-5628897;KEGG: 00030+5.3.1.9;KEGG: 00010+5.3.1.9;MetaCyc: PWY-621;Reactome: R-HSA-70171;MetaCyc: PWY-622;MetaCyc: PWY-3801;Reactome: R-HSA-6798695;MetaCyc: PWY-6142;MetaCyc: PWY-7238;KEGG: 00520+5.3.1.9;MetaCyc: PWY-7385 "UDP-N-acetyl-D-galactosamine biosynthesis III";"D-sorbitol biosynthesis I";"Gluconeogenesis";"GDP-mannose biosynthesis";"1,5-anhydrofructose degradation";"Sucrose degradation IV (sucrose phosphorylase)";"Chitin biosynthesis";"Starch and sucrose metabolism";"Sucrose biosynthesis III";"UDP-N-acetyl-D-galactosamine biosynthesis II";"TP53 Regulates Metabolic Genes";"Pentose phosphate pathway";"Glycolysis / Gluconeogenesis";"Sucrose degradation III (sucrose invertase)";"Glycolysis";"Starch biosynthesis";"Sucrose degradation II (sucrose synthase)";"Neutrophil degranulation";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Sucrose biosynthesis II";"Amino sugar and nucleotide sugar metabolism";"1,3-propanediol biosynthesis (engineered)" CFLO004904-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-430039 "mRNA Splicing - Major Pathway";"mRNA decay by 5' to 3' exoribonuclease" CFLO001299-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO016830-PA 4 Reactome: R-HSA-71737;KEGG: 00190+3.6.1.1;MetaCyc: PWY-7807;MetaCyc: PWY-7805 "Pyrophosphate hydrolysis";"Oxidative phosphorylation";"Glyphosate degradation III";"(aminomethyl)phosphonate degradation" CFLO014211-PA 5 KEGG: 00730+2.2.1.7;MetaCyc: PWY-6891;MetaCyc: PWY-7560;KEGG: 00900+2.2.1.7;MetaCyc: PWY-6892 "Thiamine metabolism";"Thiazole biosynthesis II (aerobic bacteria)";"Methylerythritol phosphate pathway II";"Terpenoid backbone biosynthesis";"Thiazole biosynthesis I (facultative anaerobic bacteria)" CFLO013126-PA 6 Reactome: R-HSA-9010553;Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-975957;Reactome: R-HSA-73856 "Regulation of expression of SLITs and ROBOs";"mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"RNA Polymerase II Transcription Termination" CFLO015237-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" CFLO002719-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" CFLO014329-PA 6 Reactome: R-HSA-9648025;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"Separation of Sister Chromatids" CFLO001267-PA 10 MetaCyc: PWY-3821;MetaCyc: PWY-6397;MetaCyc: PWY-6317;Reactome: R-HSA-5609977;MetaCyc: PWY-7344;KEGG: 00052+5.1.3.2;MetaCyc: PWY-6527;Reactome: R-HSA-70370;MetaCyc: PWY-7328;KEGG: 00520+5.1.3.2 "D-galactose detoxification";"Mycolyl-arabinogalactan-peptidoglycan complex biosynthesis";"D-galactose degradation I (Leloir pathway)";"Defective GALE can cause Epimerase-deficiency galactosemia (EDG)";"UDP-alpha-D-galactose biosynthesis";"Galactose metabolism";"Stachyose degradation";"Galactose catabolism";"Superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis";"Amino sugar and nucleotide sugar metabolism" CFLO002274-PA 1 Reactome: R-HSA-2514859 "Inactivation, recovery and regulation of the phototransduction cascade" CFLO003423-PA 3 KEGG: 00600+3.2.1.45;Reactome: R-HSA-1660662;KEGG: 00511+3.2.1.45 "Sphingolipid metabolism";"Glycosphingolipid metabolism";"Other glycan degradation" CFLO007173-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO004933-PA 4 KEGG: 00510+2.4.1.131;Reactome: R-HSA-4551295;KEGG: 00513+2.4.1.131;Reactome: R-HSA-446193 "N-Glycan biosynthesis";"Defective ALG11 causes ALG11-CDG (CDG-1p)";"Various types of N-glycan biosynthesis";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO013986-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO009676-PA 5 Reactome: R-HSA-389960;Reactome: R-HSA-390450;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-389957 "Formation of tubulin folding intermediates by CCT/TriC";"Folding of actin by CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Prefoldin mediated transfer of substrate to CCT/TriC" CFLO016779-PA 4 MetaCyc: PWY-7219;Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3;KEGG: 00230+2.7.4.3 "Adenosine ribonucleotides de novo biosynthesis";"Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism";"Purine metabolism" CFLO001958-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO002851-PA 1 Reactome: R-HSA-211981 "Xenobiotics" CFLO000259-PA 11 KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-4420097;KEGG: 04926+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-171007;Reactome: R-HSA-2559580;KEGG: 05165+2.7.11.1;Reactome: R-HSA-450302;KEGG: 04151+2.7.11.1 "Human immunodeficiency virus 1 infection";"Thermogenesis";"mTOR signaling pathway";"VEGFA-VEGFR2 Pathway";"Relaxin signaling pathway";"Human cytomegalovirus infection";"p38MAPK events";"Oxidative Stress Induced Senescence";"Human papillomavirus infection";"activated TAK1 mediates p38 MAPK activation";"PI3K-Akt signaling pathway" CFLO013084-PA 11 Reactome: R-HSA-212436;Reactome: R-HSA-9018519;Reactome: R-HSA-400253;Reactome: R-HSA-381340;Reactome: R-HSA-1368108;Reactome: R-HSA-1368082;Reactome: R-HSA-2151201;Reactome: R-HSA-1989781;Reactome: R-HSA-383280;Reactome: R-HSA-400206;Reactome: R-HSA-2426168 "Generic Transcription Pathway";"Estrogen-dependent gene expression";"Circadian Clock";"Transcriptional regulation of white adipocyte differentiation";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"RORA activates gene expression";"Transcriptional activation of mitochondrial biogenesis";"PPARA activates gene expression";"Nuclear Receptor transcription pathway";"Regulation of lipid metabolism by PPARalpha";"Activation of gene expression by SREBF (SREBP)" CFLO012814-PA 2 Reactome: R-HSA-5689880;Reactome: R-HSA-5689603 "Ub-specific processing proteases";"UCH proteinases" CFLO013485-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO016531-PA 3 Reactome: R-HSA-983168;Reactome: R-HSA-3065676;Reactome: R-HSA-3065678 "Antigen processing: Ubiquitination & Proteasome degradation";"SUMO is conjugated to E1 (UBA2:SAE1)";"SUMO is transferred from E1 to E2 (UBE2I, UBC9)" CFLO019787-PA 1 Reactome: R-HSA-1296052 "Ca2+ activated K+ channels" CFLO009658-PA 5 KEGG: 00603+3.2.1.22;KEGG: 00600+3.2.1.22;MetaCyc: PWY-6527;KEGG: 00052+3.2.1.22;KEGG: 00561+3.2.1.22 "Glycosphingolipid biosynthesis - globo and isoglobo series";"Sphingolipid metabolism";"Stachyose degradation";"Galactose metabolism";"Glycerolipid metabolism" CFLO003314-PA 17 Reactome: R-HSA-5685942;Reactome: R-HSA-6782135;Reactome: R-HSA-174437;Reactome: R-HSA-5696400;Reactome: R-HSA-69183;Reactome: R-HSA-5651801;Reactome: R-HSA-69091;Reactome: R-HSA-174417;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-174414;Reactome: R-HSA-5696397;Reactome: R-HSA-5358606;Reactome: R-HSA-69166;Reactome: R-HSA-5358565;Reactome: R-HSA-5656169;Reactome: R-HSA-174411 "HDR through Homologous Recombination (HRR)";"Dual incision in TC-NER";"Removal of the Flap Intermediate from the C-strand";"Dual Incision in GG-NER";"Processive synthesis on the lagging strand";"PCNA-Dependent Long Patch Base Excision Repair";"Polymerase switching";"Telomere C-strand (Lagging Strand) Synthesis";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Processive synthesis on the C-strand of the telomere";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Removal of the Flap Intermediate";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Termination of translesion DNA synthesis";"Polymerase switching on the C-strand of the telomere" CFLO000420-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO012317-PA 3 KEGG: 04658+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16 "Th1 and Th2 cell differentiation";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway" CFLO000825-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO002060-PA 1 Reactome: R-HSA-425986 "Sodium/Proton exchangers" CFLO009980-PA 1 MetaCyc: PWY-7379 "Mrna capping II" CFLO000315-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO000312-PA 3 Reactome: R-HSA-947581;MetaCyc: PWY-6823;KEGG: 00790+4.1.99.22 "Molybdenum cofactor biosynthesis";"Molybdenum cofactor biosynthesis";"Folate biosynthesis" CFLO011452-PA 4 MetaCyc: PWY-5084;KEGG: 00380+1.2.4.2;KEGG: 00020+1.2.4.2;KEGG: 00310+1.2.4.2 "2-oxoglutarate decarboxylation to succinyl-CoA";"Tryptophan metabolism";"Citrate cycle (TCA cycle)";"Lysine degradation" CFLO004815-PA 27 Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-5619107;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-168333;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-159236;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-180746;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-6784531;Reactome: R-HSA-168325 "SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery";"HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Nuclear import of Rev protein";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis" CFLO001710-PA 13 KEGG: 00660+6.2.1.5;Reactome: R-HSA-71403;MetaCyc: PWY-5392;MetaCyc: PWY-7384;MetaCyc: PWY-6728;KEGG: 00720+6.2.1.5;MetaCyc: PWY-5538;MetaCyc: PWY-5690;MetaCyc: PWY-5913;KEGG: 00020+6.2.1.5;KEGG: 00640+6.2.1.5;MetaCyc: PWY-6969;MetaCyc: PWY-5537 "C5-Branched dibasic acid metabolism";"Citric acid cycle (TCA cycle)";"Reductive TCA cycle II";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Methylaspartate cycle";"Carbon fixation pathways in prokaryotes";"Pyruvate fermentation to acetate VI";"TCA cycle II (plants and fungi)";"Partial TCA cycle (obligate autotrophs)";"Citrate cycle (TCA cycle)";"Propanoate metabolism";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Pyruvate fermentation to acetate V" CFLO015658-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO005301-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68949;Reactome: R-HSA-68867 "Switching of origins to a post-replicative state";"Unwinding of DNA";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Orc1 removal from chromatin";"Assembly of the pre-replicative complex" CFLO011295-PA 2 Reactome: R-HSA-4090294;Reactome: R-HSA-383280 "SUMOylation of intracellular receptors";"Nuclear Receptor transcription pathway" CFLO004096-PA 1 Reactome: R-HSA-427601 "Multifunctional anion exchangers" CFLO006604-PA 8 MetaCyc: PWY-7524;MetaCyc: PWY-922;MetaCyc: PWY-6174;KEGG: 00900+1.1.1.34;MetaCyc: PWY-7391;Reactome: R-HSA-1989781;Reactome: R-HSA-2426168;Reactome: R-HSA-191273 "Mevalonate pathway III (archaea)";"Mevalonate pathway I";"Mevalonate pathway II (archaea)";"Terpenoid backbone biosynthesis";"Isoprene biosynthesis II (engineered)";"PPARA activates gene expression";"Activation of gene expression by SREBF (SREBP)";"Cholesterol biosynthesis" CFLO002774-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO017652-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO019131-PA 6 KEGG: 00230+6.3.4.13;MetaCyc: PWY-6121;MetaCyc: PWY-6277;Reactome: R-HSA-196780;Reactome: R-HSA-73817;MetaCyc: PWY-6122 "Purine metabolism";"5-aminoimidazole ribonucleotide biosynthesis I";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"Biotin transport and metabolism";"Purine ribonucleoside monophosphate biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis II" CFLO006347-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO010590-PA 56 Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-180534;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783 "GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Vpu mediated degradation of CD4";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome" CFLO000846-PA 1 Reactome: R-HSA-9033241 "Peroxisomal protein import" CFLO004213-PA 10 Reactome: R-HSA-1483166;MetaCyc: PWY-7587;MetaCyc: PWY-5667;MetaCyc: PWY-6453;MetaCyc: PWY-8055;MetaCyc: PWY-8051;MetaCyc: PWY-8053;KEGG: 00564+2.3.1.15;KEGG: 00561+2.3.1.15;MetaCyc: PWY-7411 "Synthesis of PA";"Oleate biosynthesis III (cyanobacteria)";"CDP-diacylglycerol biosynthesis I";"Stigma estolide biosynthesis";"Palmitoyl ethanolamide biosynthesis";"Anandamide biosynthesis I";"Anandamide biosynthesis II";"Glycerophospholipid metabolism";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)" CFLO005907-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO003088-PA 7 Reactome: R-HSA-166208;Reactome: R-HSA-1632852;Reactome: R-HSA-380972;Reactome: R-HSA-165159;Reactome: R-HSA-5628897;Reactome: R-HSA-9639288;Reactome: R-HSA-8943724 "mTORC1-mediated signalling";"Macroautophagy";"Energy dependent regulation of mTOR by LKB1-AMPK";"mTOR signalling";"TP53 Regulates Metabolic Genes";"Amino acids regulate mTORC1";"Regulation of PTEN gene transcription" CFLO003772-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO007202-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO008990-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO000938-PA 10 MetaCyc: PWY-7559;KEGG: 00460+2.3.2.2;MetaCyc: PWY-7112;MetaCyc: PWY-8001;MetaCyc: PWY-6842;MetaCyc: PWY-4041;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-4061;KEGG: 00430+2.3.2.2;MetaCyc: PWY-5826 "Glutathione degradation (DUG pathway";"Cyanoamino acid metabolism";"4-hydroxy-2-nonenal detoxification";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione-mediated detoxification II";"Gamma-glutamyl cycle";"Glutathione metabolism";"Glutathione-mediated detoxification I";"Taurine and hypotaurine metabolism";"Hypoglycin biosynthesis" CFLO014193-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO001240-PA 8 Reactome: R-HSA-5693568;Reactome: R-HSA-912446;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554;Reactome: R-HSA-5693579;Reactome: R-HSA-5685938;Reactome: R-HSA-8953750;Reactome: R-HSA-5685942 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Meiotic recombination";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Homologous DNA Pairing and Strand Exchange";"HDR through Single Strand Annealing (SSA)";"Transcriptional Regulation by E2F6";"HDR through Homologous Recombination (HRR)" CFLO002629-PA 9 MetaCyc: PWY-6983;MetaCyc: PWY-6703;MetaCyc: PWY-7852;MetaCyc: PWY-7442;MetaCyc: PWY-5663;MetaCyc: PWY-5664;MetaCyc: PWY-6147;Reactome: R-HSA-1474151;KEGG: 00790+3.5.4.16 "Threo-tetrahydrobiopterin biosynthesis";"Preq0 biosynthesis";"6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium)";"Drosopterin and aurodrosopterin biosynthesis";"Erythro-tetrahydrobiopterin biosynthesis I";"Erythro-tetrahydrobiopterin biosynthesis II";"6-hydroxymethyl-dihydropterin diphosphate biosynthesis I";"Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation";"Folate biosynthesis" CFLO016537-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" CFLO010055-PA 8 Reactome: R-HSA-68867;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68827;Reactome: R-HSA-68616;Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68689 "Assembly of the pre-replicative complex";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the ORC complex at the origin of replication";"Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"CDC6 association with the ORC:origin complex" CFLO010697-PA 8 Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-113507;Reactome: R-HSA-68689;Reactome: R-HSA-68616;Reactome: R-HSA-68949 "Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"E2F-enabled inhibition of pre-replication complex formation";"CDC6 association with the ORC:origin complex";"Assembly of the ORC complex at the origin of replication";"Orc1 removal from chromatin" CFLO006573-PA 3 Reactome: R-HSA-418359;Reactome: R-HSA-5578775;Reactome: R-HSA-425561 "Reduction of cytosolic Ca++ levels";"Ion homeostasis";"Sodium/Calcium exchangers" CFLO005463-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO006971-PA 2 Reactome: R-HSA-2032785;Reactome: R-HSA-8951671 "YAP1- and WWTR1 (TAZ)-stimulated gene expression";"RUNX3 regulates YAP1-mediated transcription" CFLO017609-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO004549-PA 6 Reactome: R-HSA-5685939;Reactome: R-HSA-174437;Reactome: R-HSA-162594;Reactome: R-HSA-69166;Reactome: R-HSA-5651801;Reactome: R-HSA-110362 "HDR through MMEJ (alt-NHEJ)";"Removal of the Flap Intermediate from the C-strand";"Early Phase of HIV Life Cycle";"Removal of the Flap Intermediate";"PCNA-Dependent Long Patch Base Excision Repair";"POLB-Dependent Long Patch Base Excision Repair" CFLO017333-PA 6 Reactome: R-HSA-72706;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72695;Reactome: R-HSA-156827 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO002013-PA 31 Reactome: R-HSA-9029558;MetaCyc: PWY-7663;MetaCyc: PWY-6282;MetaCyc: PWY-7858;MetaCyc: PWY-5971;MetaCyc: PWYG-321;Reactome: R-HSA-199220;MetaCyc: PWY-5147;MetaCyc: PWY-8049;MetaCyc: PWY-7664;MetaCyc: PWY-5966-1;MetaCyc: PWY-6113;MetaCyc: PWY-5142;MetaCyc: PWY-5366;MetaCyc: PWY-5367;MetaCyc: PWY-8047;Reactome: R-HSA-163765;MetaCyc: PWY-4381;Reactome: R-HSA-2426168;Reactome: R-HSA-75105;MetaCyc: PWY-5973;KEGG: 00780+1.1.1.100+4.2.1.59+2.3.1.41;KEGG: 00061+1.1.1.100+2.3.1.85+4.2.1.59+2.3.1.39+2.3.1.41+3.1.2.14;MetaCyc: PWY-5989;MetaCyc: PWY-7388;MetaCyc: PWY-7746;MetaCyc: PWY-8012;MetaCyc: PWY-6519;MetaCyc: PWY-7723;MetaCyc: PWY-5994;MetaCyc: PWY-6799 "NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Gondoate biosynthesis (anaerobic)";"Palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)";"(5Z)-dodecenoate biosynthesis II";"Palmitate biosynthesis II (bacteria and plant cytoplasm)";"";"Vitamin B5 (pantothenate) metabolism";"Oleate biosynthesis I (plants)";"Pederin biosynthesis";"Oleate biosynthesis IV (anaerobic)";"Fatty acid biosynthesis initiation (animals and fungi, cytoplasm)";"Superpathway of mycolate biosynthesis";"Acyl-[acyl-carrier protein] thioesterase pathway";"Palmitoleate biosynthesis II (plants and bacteria)";"Petroselinate biosynthesis";"Bryostatin biosynthesis";"ChREBP activates metabolic gene expression";"Fatty acid biosynthesis initiation (bacteria and plants)";"Activation of gene expression by SREBF (SREBP)";"Fatty acyl-CoA biosynthesis";"Cis-vaccenate biosynthesis";"Biotin metabolism";"Fatty acid biosynthesis";"Stearate biosynthesis II (bacteria and plants)";"Octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)";"Mycobacterial sulfolipid biosynthesis";"Mupirocin biosynthesis";"8-amino-7-oxononanoate biosynthesis I";"Bacterial bioluminescence";"Palmitate biosynthesis (animals and fungi, cytoplasm)";"Fatty acid biosynthesis initiation (plant mitochondria)" CFLO007139-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO018008-PA 20 Reactome: R-HSA-165159;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-5674400;Reactome: R-HSA-5218920;Reactome: R-HSA-1257604;KEGG: 05170+2.7.11.1;Reactome: R-HSA-389357;Reactome: R-HSA-6804757;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1;Reactome: R-HSA-8943724;Reactome: R-HSA-380972;Reactome: R-HSA-166208;KEGG: 05165+2.7.11.1;Reactome: R-HSA-5628897;Reactome: R-HSA-9639288;Reactome: R-HSA-1632852;KEGG: 04150+2.7.11.1;Reactome: R-HSA-3371571 "mTOR signalling";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Constitutive Signaling by AKT1 E17K in Cancer";"VEGFR2 mediated vascular permeability";"PIP3 activates AKT signaling";"Human immunodeficiency virus 1 infection";"CD28 dependent PI3K/Akt signaling";"Regulation of TP53 Degradation";"Relaxin signaling pathway";"Thermogenesis";"Regulation of PTEN gene transcription";"Energy dependent regulation of mTOR by LKB1-AMPK";"mTORC1-mediated signalling";"Human papillomavirus infection";"TP53 Regulates Metabolic Genes";"Amino acids regulate mTORC1";"Macroautophagy";"mTOR signaling pathway";"HSF1-dependent transactivation" CFLO014409-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-6811434 "Neutrophil degranulation";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO012292-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO006104-PA 6 Reactome: R-HSA-6803205;Reactome: R-HSA-139915;Reactome: R-HSA-6803204;Reactome: R-HSA-6803207;Reactome: R-HSA-6803211;Reactome: R-HSA-6804759 "TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain";"Activation of PUMA and translocation to mitochondria";"TP53 Regulates Transcription of Genes Involved in Cytochrome C Release";"TP53 Regulates Transcription of Caspase Activators and Caspases";"TP53 Regulates Transcription of Death Receptors and Ligands";"Regulation of TP53 Activity through Association with Co-factors" CFLO003941-PA 1 Reactome: R-HSA-5358493 "Synthesis of diphthamide-EEF2" CFLO007256-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" CFLO004347-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO004817-PA 1 Reactome: R-HSA-5649702 "APEX1-Independent Resolution of AP Sites via the Single Nucleotide Replacement Pathway" CFLO013929-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO003729-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO006136-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO003101-PA 6 KEGG: 00040+1.1.1.22;KEGG: 00053+1.1.1.22;Reactome: R-HSA-173599;MetaCyc: PWY-7820;MetaCyc: PWY-7346;KEGG: 00520+1.1.1.22 "Pentose and glucuronate interconversions";"Ascorbate and aldarate metabolism";"Formation of the active cofactor, UDP-glucuronate";"Teichuronic acid biosynthesis (B. subtilis 168)";"UDP-alpha-D-glucuronate biosynthesis (from UDP-glucose)";"Amino sugar and nucleotide sugar metabolism" CFLO018890-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO008213-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-212436;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"Generic Transcription Pathway";"PPARA activates gene expression" CFLO005376-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" CFLO011784-PA 2 Reactome: R-HSA-5218920;Reactome: R-HSA-418990 "VEGFR2 mediated vascular permeability";"Adherens junctions interactions" CFLO007412-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO012986-PA 8 KEGG: 05170+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05163+2.7.11.1;Reactome: R-HSA-975957;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1 "Human immunodeficiency virus 1 infection";"Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human cytomegalovirus infection";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"PI3K-Akt signaling pathway";"Human papillomavirus infection" CFLO002079-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO015619-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" CFLO009853-PA 5 Reactome: R-HSA-72163;Reactome: R-HSA-6782210;Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823 "mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex" CFLO002794-PA 2 Reactome: R-HSA-5625740;KEGG: 04070+2.7.11.13 "RHO GTPases activate PKNs";"Phosphatidylinositol signaling system" CFLO005622-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" CFLO007145-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" CFLO018054-PA 6 Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-450604;Reactome: R-HSA-450513;Reactome: R-HSA-429958;Reactome: R-HSA-6791226 "ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO018824-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO002397-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO007364-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-6803157 "Neutrophil degranulation";"Antimicrobial peptides" CFLO007683-PA 1 KEGG: 00051+4.2.1.68 "Fructose and mannose metabolism" CFLO012007-PA 3 KEGG: 00230+4.6.1.2;Reactome: R-HSA-392154;Reactome: R-HSA-445355 "Purine metabolism";"Nitric oxide stimulates guanylate cyclase";"Smooth Muscle Contraction" CFLO017925-PA 2 MetaCyc: PWY-6829;Reactome: R-HSA-6782315 "Trna methylation (yeast)";"tRNA modification in the nucleus and cytosol" CFLO010956-PA 14 MetaCyc: PWY-7035;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725;KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-6598;MetaCyc: PWY-5080;MetaCyc: PWY-7036;MetaCyc: PWY-7724;MetaCyc: PWY-7619;MetaCyc: PWY-5972 "(9Z)-tricosene biosynthesis";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis I";"Very long chain fatty acid biosynthesis II";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Juniperonate biosynthesis";"Stearate biosynthesis I (animals)" CFLO008087-PA 27 Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-159236;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4615885 "Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Transcriptional regulation by small RNAs";"HCMV Late Events";"snRNP Assembly";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins" CFLO015146-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO015478-PA 6 MetaCyc: PWY-6722;Reactome: R-HSA-196780;MetaCyc: PWY-4381;MetaCyc: PWY-5789;MetaCyc: PWY-5743;MetaCyc: PWY-5744 "Candicidin biosynthesis";"Biotin transport and metabolism";"Fatty acid biosynthesis initiation (bacteria and plants)";"3-hydroxypropanoate/4-hydroxybutanate cycle";"3-hydroxypropanoate cycle";"Glyoxylate assimilation" CFLO008119-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO000494-PA 4 MetaCyc: PWY-3722;Reactome: R-HSA-6798163;MetaCyc: PWY-7494;KEGG: 00260+1.2.1.8+1.1.99.1 "Glycine betaine biosynthesis II (Gram-positive bacteria)";"Choline catabolism";"Choline degradation IV";"Glycine, serine and threonine metabolism" CFLO002661-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" CFLO003305-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO002824-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" CFLO005771-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO012305-PA 3 Reactome: R-HSA-3899300;Reactome: R-HSA-6804757;Reactome: R-HSA-9609690 "SUMOylation of transcription cofactors";"Regulation of TP53 Degradation";"HCMV Early Events" CFLO004278-PA 19 Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-3214858;Reactome: R-HSA-6790901;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-8876725 "L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"RMTs methylate histone arginines";"rRNA modification in the nucleus and cytosol";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Translation initiation complex formation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Protein methylation" CFLO000265-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO002308-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO004252-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO006053-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO006734-PA 4 Reactome: R-HSA-4641265;Reactome: R-HSA-3769402;Reactome: R-HSA-201722;Reactome: R-HSA-2122947 "Repression of WNT target genes";"Deactivation of the beta-catenin transactivating complex";"Formation of the beta-catenin:TCF transactivating complex";"NOTCH1 Intracellular Domain Regulates Transcription" CFLO006374-PA 3 Reactome: R-HSA-112382;Reactome: R-HSA-75955;Reactome: R-HSA-674695 "Formation of RNA Pol II elongation complex";"RNA Polymerase II Transcription Elongation";"RNA Polymerase II Pre-transcription Events" CFLO012982-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO018056-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO003330-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO010314-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO019202-PA 7 KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1 "Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"Thermogenesis";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway" CFLO016180-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO004429-PA 1 Reactome: R-HSA-68962 "Activation of the pre-replicative complex" CFLO008946-PA 1 Reactome: R-HSA-211981 "Xenobiotics" CFLO016182-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" CFLO012113-PA 11 Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-3214847;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-167172;Reactome: R-HSA-6804756;Reactome: R-HSA-73776;Reactome: R-HSA-674695;Reactome: R-HSA-73779;Reactome: R-HSA-5689880 "RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"HATs acetylate histones";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"Transcription of the HIV genome";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Ub-specific processing proteases" CFLO011608-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO000580-PA 1 KEGG: 00860+4.4.1.17 "Porphyrin and chlorophyll metabolism" CFLO008716-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-5884;MetaCyc: PWY-7656;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782 "Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis" CFLO006521-PA 10 KEGG: 00900+2.3.3.10;KEGG: 00650+2.3.3.10;MetaCyc: PWY-7571;Reactome: R-HSA-1989781;MetaCyc: PWY-7391;MetaCyc: PWY-6174;MetaCyc: PWY-922;KEGG: 00280+2.3.3.10;KEGG: 00072+2.3.3.10;MetaCyc: PWY-7524 "Terpenoid backbone biosynthesis";"Butanoate metabolism";"Ferrichrome A biosynthesis";"PPARA activates gene expression";"Isoprene biosynthesis II (engineered)";"Mevalonate pathway II (archaea)";"Mevalonate pathway I";"Valine, leucine and isoleucine degradation";"Synthesis and degradation of ketone bodies";"Mevalonate pathway III (archaea)" CFLO001701-PA 6 KEGG: 00030+3.1.1.17;MetaCyc: PWY-7165;MetaCyc: PWY-2221;KEGG: 00930+3.1.1.17;MetaCyc: PWY-5530;KEGG: 00053+3.1.1.17 "Pentose phosphate pathway";"L-ascorbate biosynthesis VI (engineered pathway)";"Entner-Doudoroff pathway III (semi-phosphorylative)";"Caprolactam degradation";"Sorbitol biosynthesis II";"Ascorbate and aldarate metabolism" CFLO018098-PA 1 Reactome: R-HSA-8949664 "Processing of SMDT1" CFLO012613-PA 7 MetaCyc: PWY-6614;KEGG: 00670+1.5.1.3;Reactome: R-HSA-196757;Reactome: R-HSA-1474151;MetaCyc: PWY-3841;Reactome: R-HSA-69205;KEGG: 00790+1.5.1.3 "Tetrahydrofolate biosynthesis";"One carbon pool by folate";"Metabolism of folate and pterines";"Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation";"Folate transformations II (plants)";"G1/S-Specific Transcription";"Folate biosynthesis" CFLO014425-PA 5 Reactome: R-HSA-389357;Reactome: R-HSA-1257604;Reactome: R-HSA-5218920;Reactome: R-HSA-5674400;Reactome: R-HSA-6804757 "CD28 dependent PI3K/Akt signaling";"PIP3 activates AKT signaling";"VEGFR2 mediated vascular permeability";"Constitutive Signaling by AKT1 E17K in Cancer";"Regulation of TP53 Degradation" CFLO007437-PA 42 Reactome: R-HSA-3214841;Reactome: R-HSA-201722;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847;Reactome: R-HSA-73728;Reactome: R-HSA-8939236;Reactome: R-HSA-2559582;Reactome: R-HSA-606279;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-212300;Reactome: R-HSA-3214815;Reactome: R-HSA-110328;Reactome: R-HSA-5625886;Reactome: R-HSA-2559580;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-8936459;Reactome: R-HSA-5334118;Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-9616222;Reactome: R-HSA-427413;Reactome: R-HSA-5693571;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-73772;Reactome: R-HSA-110329;Reactome: R-HSA-1221632 "PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex";"Transcriptional regulation by small RNAs";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones";"RNA Polymerase I Promoter Opening";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Senescence-Associated Secretory Phenotype (SASP)";"Deposition of new CENPA-containing nucleosomes at the centromere";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"PRC2 methylates histones and DNA";"HDACs deacetylate histones";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Oxidative Stress Induced Senescence";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"DNA methylation";"HCMV Early Events";"Packaging Of Telomere Ends";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Transcriptional regulation of granulopoiesis";"NoRC negatively regulates rRNA expression";"Nonhomologous End-Joining (NHEJ)";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"RNA Polymerase I Promoter Escape";"Cleavage of the damaged pyrimidine";"Meiotic synapsis" CFLO008699-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO015380-PA 8 Reactome: R-HSA-9613354;Reactome: R-HSA-380972;Reactome: R-HSA-1445148;Reactome: R-HSA-2151209;Reactome: R-HSA-6804756;Reactome: R-HSA-5628897;Reactome: R-HSA-1632852;Reactome: R-HSA-9619483 "Lipophagy";"Energy dependent regulation of mTOR by LKB1-AMPK";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"Activation of PPARGC1A (PGC-1alpha) by phosphorylation";"Regulation of TP53 Activity through Phosphorylation";"TP53 Regulates Metabolic Genes";"Macroautophagy";"Activation of AMPK downstream of NMDARs" CFLO002998-PA 33 Reactome: R-HSA-9648025;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-168325;Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-159236;Reactome: R-HSA-4570464;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-3232142;Reactome: R-HSA-168276;Reactome: R-HSA-170822;Reactome: R-HSA-4615885;Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-6784531;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-2467813;Reactome: R-HSA-4085377;Reactome: R-HSA-5663220;Reactome: R-HSA-191859;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-9609690;Reactome: R-HSA-68877;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-159230 "EML4 and NUDC in mitotic spindle formation";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Viral Messenger RNA Synthesis";"Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of RNA binding proteins";"HCMV Late Events";"Transcriptional regulation by small RNAs";"SUMOylation of ubiquitinylation proteins";"NS1 Mediated Effects on Host Pathways";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of DNA replication proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"tRNA processing in the nucleus";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Separation of Sister Chromatids";"SUMOylation of SUMOylation proteins";"RHO GTPases Activate Formins";"snRNP Assembly";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"HCMV Early Events";"Mitotic Prometaphase";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Transport of the SLBP Dependant Mature mRNA" CFLO009580-PA 7 Reactome: R-HSA-390450;Reactome: R-HSA-6798695;Reactome: R-HSA-389960;Reactome: R-HSA-5620922;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-389957 "Folding of actin by CCT/TriC";"Neutrophil degranulation";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Prefoldin mediated transfer of substrate to CCT/TriC" CFLO000157-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO004416-PA 2 Reactome: R-HSA-8936459;Reactome: R-HSA-3214841 "RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"PKMTs methylate histone lysines" CFLO001457-PA 3 Reactome: R-HSA-3899300;Reactome: R-HSA-3232118;Reactome: R-HSA-4090294 "SUMOylation of transcription cofactors";"SUMOylation of transcription factors";"SUMOylation of intracellular receptors" CFLO016364-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO002666-PA 1 Reactome: R-HSA-209968 "Thyroxine biosynthesis" CFLO018796-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO010285-PA 1 Reactome: R-HSA-70171 "Glycolysis" CFLO008623-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO009644-PA 6 Reactome: R-HSA-450604;Reactome: R-HSA-450385;Reactome: R-HSA-380994;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450513 "KSRP (KHSRP) binds and destabilizes mRNA";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA" CFLO002258-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO000311-PA 2 Reactome: R-HSA-203927;Reactome: R-HSA-426486 "MicroRNA (miRNA) biogenesis";"Small interfering RNA (siRNA) biogenesis" CFLO011086-PA 7 Reactome: R-HSA-2122948;Reactome: R-HSA-2644606;Reactome: R-HSA-2660826;Reactome: R-HSA-177929;Reactome: R-HSA-1442490;Reactome: R-HSA-2894862;Reactome: R-HSA-2691232 "Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Signaling by EGFR";"Collagen degradation";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants" CFLO019047-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO006344-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO001341-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO008715-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7656;MetaCyc: PWY-6733;MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84 "Wax biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis" CFLO015660-PA 1 Reactome: R-HSA-77108 "Utilization of Ketone Bodies" CFLO009463-PA 3 Reactome: R-HSA-5423646;Reactome: R-HSA-2142691;MetaCyc: PWY-7533 "Aflatoxin activation and detoxification";"Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis" CFLO001559-PA 1 Reactome: R-HSA-196843 "Vitamin B2 (riboflavin) metabolism" CFLO011450-PA 5 KEGG: 00020+1.2.4.2;KEGG: 00310+1.2.4.2;KEGG: 00380+1.2.4.2;Reactome: R-HSA-389661;MetaCyc: PWY-5084 "Citrate cycle (TCA cycle)";"Lysine degradation";"Tryptophan metabolism";"Glyoxylate metabolism and glycine degradation";"2-oxoglutarate decarboxylation to succinyl-CoA" CFLO006369-PA 7 MetaCyc: PWY-5129;MetaCyc: PWY-7839;MetaCyc: PWY-7841;MetaCyc: PWY-7836;Reactome: R-HSA-1660662;MetaCyc: PWY-7838;KEGG: 00600+2.4.1.80 "Sphingolipid biosynthesis (plants)";"Lacto-series glycosphingolipids biosynthesis";"Neolacto-series glycosphingolipids biosynthesis";"Ganglio-series glycosphingolipids biosynthesis";"Glycosphingolipid metabolism";"Globo-series glycosphingolipids biosynthesis";"Sphingolipid metabolism" CFLO019828-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" CFLO004177-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" CFLO019753-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO008579-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO011218-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" CFLO015175-PA 2 KEGG: 00071+2.3.1.21;MetaCyc: PWY-6111 "Fatty acid degradation";"Mitochondrial L-carnitine shuttle" CFLO007183-PA 1 Reactome: R-HSA-69273 "Cyclin A/B1/B2 associated events during G2/M transition" CFLO012964-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO003215-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO009568-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" CFLO011962-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" CFLO009849-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO001242-PA 24 Reactome: R-HSA-8955332;Reactome: R-HSA-437239;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-9619483;Reactome: R-HSA-380320;Reactome: R-HSA-8852276;Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-9646399;Reactome: R-HSA-9609736;Reactome: R-HSA-6811436;Reactome: R-HSA-190861;Reactome: R-HSA-9609690;Reactome: R-HSA-68877;Reactome: R-HSA-5626467;Reactome: R-HSA-190840;Reactome: R-HSA-3371497;Reactome: R-HSA-5617833;Reactome: R-HSA-6811434;Reactome: R-HSA-1445148;Reactome: R-HSA-2132295;Reactome: R-HSA-983189;Reactome: R-HSA-6807878 "Carboxyterminal post-translational modifications of tubulin";"Recycling pathway of L1";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Activation of AMPK downstream of NMDARs";"Recruitment of NuMA to mitotic centrosomes";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"Aggrephagy";"Assembly and cell surface presentation of NMDA receptors";"COPI-independent Golgi-to-ER retrograde traffic";"Gap junction assembly";"HCMV Early Events";"Mitotic Prometaphase";"RHO GTPases activate IQGAPs";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Cilium Assembly";"COPI-dependent Golgi-to-ER retrograde traffic";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"MHC class II antigen presentation";"Kinesins";"COPI-mediated anterograde transport" CFLO014404-PA 5 Reactome: R-HSA-212300;Reactome: R-HSA-4655427;Reactome: R-HSA-5334118;Reactome: R-HSA-427413;KEGG: 00270+2.1.1.37 "PRC2 methylates histones and DNA";"SUMOylation of DNA methylation proteins";"DNA methylation";"NoRC negatively regulates rRNA expression";"Cysteine and methionine metabolism" CFLO004033-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO004835-PA 1 Reactome: R-HSA-380972 "Energy dependent regulation of mTOR by LKB1-AMPK" CFLO003009-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" CFLO002305-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO018653-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO002306-PA 2 Reactome: R-HSA-8963888;Reactome: R-HSA-8866423 "Chylomicron assembly";"VLDL assembly" CFLO017453-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO004463-PA 8 Reactome: R-HSA-68616;Reactome: R-HSA-68949;Reactome: R-HSA-113507;Reactome: R-HSA-68689;Reactome: R-HSA-68867;Reactome: R-HSA-68827;Reactome: R-HSA-68962;Reactome: R-HSA-176187 "Assembly of the ORC complex at the origin of replication";"Orc1 removal from chromatin";"E2F-enabled inhibition of pre-replication complex formation";"CDC6 association with the ORC:origin complex";"Assembly of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress" CFLO000703-PA 2 Reactome: R-HSA-2022928;MetaCyc: PWY-6558 "HS-GAG biosynthesis";"Heparan sulfate biosynthesis (late stages)" CFLO012315-PA 6 Reactome: R-HSA-68867;Reactome: R-HSA-68949;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-176974;Reactome: R-HSA-69052 "Assembly of the pre-replicative complex";"Orc1 removal from chromatin";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Unwinding of DNA";"Switching of origins to a post-replicative state" CFLO012249-PA 2 KEGG: 00970+6.1.1.9;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" CFLO006599-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO019135-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO016868-PA 2 Reactome: R-HSA-804914;Reactome: R-HSA-9029569 "Transport of fatty acids";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux" CFLO005935-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO000940-PA 1 Reactome: R-HSA-5223345 "Miscellaneous transport and binding events" CFLO011464-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO009315-PA 2 Reactome: R-HSA-983231;Reactome: R-HSA-5205685 "Factors involved in megakaryocyte development and platelet production";"Pink/Parkin Mediated Mitophagy" CFLO004174-PA 6 Reactome: R-HSA-72163;Reactome: R-HSA-6782210;Reactome: R-HSA-6781827;Reactome: R-HSA-6781823;Reactome: R-HSA-6782135;Reactome: R-HSA-6798695 "mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of TC-NER Pre-Incision Complex";"Dual incision in TC-NER";"Neutrophil degranulation" CFLO005111-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO015692-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO018085-PA 18 Reactome: R-HSA-75955;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-6807505;Reactome: R-HSA-113418;Reactome: R-HSA-167287;Reactome: R-HSA-167243;Reactome: R-HSA-674695;Reactome: R-HSA-167290;Reactome: R-HSA-167200;Reactome: R-HSA-167160;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167152;Reactome: R-HSA-167242;Reactome: R-HSA-112382;Reactome: R-HSA-167246;Reactome: R-HSA-6796648 "RNA Polymerase II Transcription Elongation";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"RNA polymerase II transcribes snRNA genes";"Formation of the Early Elongation Complex";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"Formation of HIV elongation complex in the absence of HIV Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of RNA Pol II elongation complex";"Tat-mediated elongation of the HIV-1 transcript";"TP53 Regulates Transcription of DNA Repair Genes" CFLO004570-PA 6 MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-6733;MetaCyc: PWY-5884;MetaCyc: PWY-7656;Reactome: R-HSA-9640463 "Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Wax biosynthesis" CFLO010498-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-6811436 "RAB GEFs exchange GTP for GDP on RABs";"COPI-independent Golgi-to-ER retrograde traffic" CFLO019644-PA 1 Reactome: R-HSA-203927 "MicroRNA (miRNA) biogenesis" CFLO016560-PA 1 Reactome: R-HSA-350562 "Regulation of ornithine decarboxylase (ODC)" CFLO003449-PA 5 KEGG: 00240+2.4.2.3;KEGG: 00983+2.4.2.3;Reactome: R-HSA-73614;Reactome: R-HSA-73621;MetaCyc: PWY-5532 "Pyrimidine metabolism";"Drug metabolism - other enzymes";"Pyrimidine salvage";"Pyrimidine catabolism";"Nucleoside and nucleotide degradation (archaea)" CFLO006212-PA 6 Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450513 "KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA" CFLO012573-PA 8 KEGG: 00230+3.5.4.4;Reactome: R-HSA-74217;MetaCyc: PWY-7179;MetaCyc: PWY-6611;MetaCyc: PWY-7179-1;MetaCyc: PWY-6609;Reactome: R-HSA-5683826;Reactome: R-HSA-6798695 "Purine metabolism";"Purine salvage";"Purine deoxyribonucleosides degradation I";"Adenine and adenosine salvage V";"Purine deoxyribonucleosides degradation II";"Adenine and adenosine salvage III";"Surfactant metabolism";"Neutrophil degranulation" CFLO012750-PA 4 Reactome: R-HSA-936440;Reactome: R-HSA-1632852;Reactome: R-HSA-5205685;Reactome: R-HSA-8934903 "Negative regulators of DDX58/IFIH1 signaling";"Macroautophagy";"Pink/Parkin Mediated Mitophagy";"Receptor Mediated Mitophagy" CFLO006488-PA 2 Reactome: R-HSA-379716;KEGG: 00970+6.1.1.7 "Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" CFLO001428-PA 11 Reactome: R-HSA-2122948;Reactome: R-HSA-9013700;Reactome: R-HSA-1251985;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-9017802;Reactome: R-HSA-205043;Reactome: R-HSA-3928665;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-193692 "Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH4 Activation and Transmission of Signal to the Nucleus";"Nuclear signaling by ERBB4";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Noncanonical activation of NOTCH3";"NRIF signals cell death from the nucleus";"EPH-ephrin mediated repulsion of cells";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Regulated proteolysis of p75NTR" CFLO000324-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO006045-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO016506-PA 9 Reactome: R-HSA-400206;Reactome: R-HSA-2426168;Reactome: R-HSA-1368082;Reactome: R-HSA-1368108;Reactome: R-HSA-1989781;Reactome: R-HSA-2151201;Reactome: R-HSA-400253;Reactome: R-HSA-381340;Reactome: R-HSA-191859 "Regulation of lipid metabolism by PPARalpha";"Activation of gene expression by SREBF (SREBP)";"RORA activates gene expression";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"PPARA activates gene expression";"Transcriptional activation of mitochondrial biogenesis";"Circadian Clock";"Transcriptional regulation of white adipocyte differentiation";"snRNP Assembly" CFLO000256-PA 7 MetaCyc: PWY-7511;Reactome: R-HSA-2393930;Reactome: R-HSA-8948751;Reactome: R-HSA-983168;Reactome: R-HSA-8939902;Reactome: R-HSA-8863795;Reactome: R-HSA-2173788 "Protein ubiquitination";"Phosphate bond hydrolysis by NUDT proteins";"Regulation of PTEN stability and activity";"Antigen processing: Ubiquitination & Proteasome degradation";"Regulation of RUNX2 expression and activity";"Downregulation of ERBB2 signaling";"Downregulation of TGF-beta receptor signaling" CFLO015341-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-1236974 "SRP-dependent cotranslational protein targeting to membrane";"ER-Phagosome pathway" CFLO003207-PA 18 Reactome: R-HSA-1482925;MetaCyc: PWY-8051;MetaCyc: PWY-8053;Reactome: R-HSA-1482922;Reactome: R-HSA-1482839;MetaCyc: PWY-7417;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482788;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;MetaCyc: PWY-7416;KEGG: 00590+3.1.1.4;Reactome: R-HSA-1482801;MetaCyc: PWY-7783;MetaCyc: PWY-7409;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166;KEGG: 00591+3.1.1.4 "Acyl chain remodelling of PG";"Anandamide biosynthesis I";"Anandamide biosynthesis II";"Acyl chain remodelling of PI";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PC";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Arachidonic acid metabolism";"Acyl chain remodelling of PS";"Plasmalogen degradation";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Ether lipid metabolism";"Synthesis of PA";"Linoleic acid metabolism" CFLO006206-PA 1 Reactome: R-HSA-5689901 "Metalloprotease DUBs" CFLO016920-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO000243-PA 1 KEGG: 00970+6.1.1.9 "Aminoacyl-tRNA biosynthesis" CFLO000988-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" CFLO005178-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO005807-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO012780-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO009848-PA 16 Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706 "Translation initiation complex formation";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO005737-PA 2 Reactome: R-HSA-5673001;Reactome: R-HSA-8853659 "RAF/MAP kinase cascade";"RET signaling" CFLO009654-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO000333-PA 1 Reactome: R-HSA-380320 "Recruitment of NuMA to mitotic centrosomes" CFLO013499-PA 9 Reactome: R-HSA-3656237;Reactome: R-HSA-2024096;Reactome: R-HSA-3560783;Reactome: R-HSA-975634;Reactome: R-HSA-3560801;Reactome: R-HSA-2022928;Reactome: R-HSA-1971475;Reactome: R-HSA-4420332;Reactome: R-HSA-3656253 "Defective EXT2 causes exostoses 2";"HS-GAG degradation";"Defective B4GALT7 causes EDS, progeroid type";"Retinoid metabolism and transport";"Defective B3GAT3 causes JDSSDHD";"HS-GAG biosynthesis";"A tetrasaccharide linker sequence is required for GAG synthesis";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS" CFLO010673-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-749476;Reactome: R-HSA-1834949;Reactome: R-HSA-76071;Reactome: R-HSA-73980 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination" CFLO002670-PA 1 Reactome: R-HSA-525793 "Myogenesis" CFLO013865-PA 4 MetaCyc: PWY-7375;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160 "Mrna capping I";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection" CFLO001296-PA 5 Reactome: R-HSA-6811436;Reactome: R-HSA-983231;Reactome: R-HSA-2132295;Reactome: R-HSA-3371497;Reactome: R-HSA-6807878 "COPI-independent Golgi-to-ER retrograde traffic";"Factors involved in megakaryocyte development and platelet production";"MHC class II antigen presentation";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"COPI-mediated anterograde transport" CFLO012028-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO015084-PA 7 KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Thermogenesis";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO008023-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" CFLO017597-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-445095 "COPI-mediated anterograde transport";"Interaction between L1 and Ankyrins" CFLO010589-PA 6 MetaCyc: PWY-622;KEGG: 00500+3.2.1.1;MetaCyc: PWY-7900;MetaCyc: PWY-5067;KEGG: 00500+2.4.1.18;Reactome: R-HSA-189085 "Starch biosynthesis";"Starch and sucrose metabolism";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism";"Digestion of dietary carbohydrate" CFLO015327-PA 6 KEGG: 00670+2.1.2.3;MetaCyc: PWY-6124;Reactome: R-HSA-73817;MetaCyc: PWY-6123;MetaCyc: PWY-7234;KEGG: 00230+3.5.4.10+2.1.2.3 "One carbon pool by folate";"Inosine-5'-phosphate biosynthesis II";"Purine ribonucleoside monophosphate biosynthesis";"Inosine-5'-phosphate biosynthesis I";"Inosine-5'-phosphate biosynthesis III";"Purine metabolism" CFLO010852-PA 2 Reactome: R-HSA-70350;Reactome: R-HSA-168928 "Fructose catabolism";"DDX58/IFIH1-mediated induction of interferon-alpha/beta" CFLO013546-PA 42 Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-606279;Reactome: R-HSA-73728;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638;Reactome: R-HSA-110330;Reactome: R-HSA-3214842;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-3214841;Reactome: R-HSA-5250924;Reactome: R-HSA-9610379;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-201722;Reactome: R-HSA-3214858;Reactome: R-HSA-1912408;Reactome: R-HSA-3214847;Reactome: R-HSA-110331;Reactome: R-HSA-977225;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-9616222;Reactome: R-HSA-73772;Reactome: R-HSA-427389;Reactome: R-HSA-912446;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-1221632;Reactome: R-HSA-110329;Reactome: R-HSA-2559580;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-427359;Reactome: R-HSA-69473;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459 "Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Deposition of new CENPA-containing nucleosomes at the centromere";"RNA Polymerase I Promoter Opening";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins";"Recognition and association of DNA glycosylase with site containing an affected purine";"HDMs demethylate histones";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"PKMTs methylate histone lysines";"B-WICH complex positively regulates rRNA expression";"HCMV Late Events";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"Formation of the beta-catenin:TCF transactivating complex";"RMTs methylate histone arginines";"Pre-NOTCH Transcription and Translation";"HATs acetylate histones";"Cleavage of the damaged purine";"Amyloid fiber formation";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Packaging Of Telomere Ends";"HCMV Early Events";"Transcriptional regulation of granulopoiesis";"RNA Polymerase I Promoter Escape";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Meiotic recombination";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"Meiotic synapsis";"Cleavage of the damaged pyrimidine";"Oxidative Stress Induced Senescence";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"SIRT1 negatively regulates rRNA expression";"G2/M DNA damage checkpoint";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function" CFLO008709-PA 5 Reactome: R-HSA-73856;Reactome: R-HSA-77595;Reactome: R-HSA-72187;Reactome: R-HSA-6784531;Reactome: R-HSA-72163 "RNA Polymerase II Transcription Termination";"Processing of Intronless Pre-mRNAs";"mRNA 3'-end processing";"tRNA processing in the nucleus";"mRNA Splicing - Major Pathway" CFLO011034-PA 3 KEGG: 04660+2.7.10.2;Reactome: R-HSA-391160;Reactome: R-HSA-4420097 "T cell receptor signaling pathway";"Signal regulatory protein family interactions";"VEGFA-VEGFR2 Pathway" CFLO002127-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" CFLO016867-PA 2 MetaCyc: PWY-7221;KEGG: 00230+2.7.4.8 "Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism" CFLO012619-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO011973-PA 56 Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-5668541;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-68949;Reactome: R-HSA-5607761 "Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"TNFR2 non-canonical NF-kB pathway";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"MAPK6/MAPK4 signaling";"Degradation of DVL";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling" CFLO006323-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO014989-PA 5 Reactome: R-HSA-9013973;Reactome: R-HSA-936440;Reactome: R-HSA-936964;Reactome: R-HSA-918233;Reactome: R-HSA-933541 "TICAM1-dependent activation of IRF3/IRF7";"Negative regulators of DDX58/IFIH1 signaling";"Activation of IRF3/IRF7 mediated by TBK1/IKK epsilon";"TRAF3-dependent IRF activation pathway";"TRAF6 mediated IRF7 activation" CFLO018088-PA 7 Reactome: R-HSA-380259;Reactome: R-HSA-380270;Reactome: R-HSA-8854518;Reactome: R-HSA-380320;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380284 "Loss of Nlp from mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"AURKA Activation by TPX2";"Recruitment of NuMA to mitotic centrosomes";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Loss of proteins required for interphase microtubule organization from the centrosome" CFLO015006-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO004761-PA 4 Reactome: R-HSA-6798695;Reactome: R-HSA-6802952;Reactome: R-HSA-1632852;Reactome: R-HSA-983168 "Neutrophil degranulation";"Signaling by BRAF and RAF fusions";"Macroautophagy";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO017428-PA 1 Reactome: R-HSA-5578775 "Ion homeostasis" CFLO000296-PA 3 Reactome: R-HSA-8854691;KEGG: 04660+2.7.10.2;Reactome: R-HSA-6785807 "Interleukin-20 family signaling";"T cell receptor signaling pathway";"Interleukin-4 and Interleukin-13 signaling" CFLO007308-PA 4 Reactome: R-HSA-2132295;Reactome: R-HSA-983189;Reactome: R-HSA-6811434;Reactome: R-HSA-5625970 "MHC class II antigen presentation";"Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic";"RHO GTPases activate KTN1" CFLO014700-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" CFLO004109-PA 3 Reactome: R-HSA-5620916;Reactome: R-HSA-264876;Reactome: R-HSA-1445148 "VxPx cargo-targeting to cilium";"Insulin processing";"Translocation of SLC2A4 (GLUT4) to the plasma membrane" CFLO004157-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO019824-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" CFLO010420-PA 8 Reactome: R-HSA-6782210;Reactome: R-HSA-5689880;Reactome: R-HSA-8948747;Reactome: R-HSA-6781823;Reactome: R-HSA-6782135;Reactome: R-HSA-8866652;Reactome: R-HSA-6804757;Reactome: R-HSA-6781827 "Gap-filling DNA repair synthesis and ligation in TC-NER";"Ub-specific processing proteases";"Regulation of PTEN localization";"Formation of TC-NER Pre-Incision Complex";"Dual incision in TC-NER";"Synthesis of active ubiquitin: roles of E1 and E2 enzymes";"Regulation of TP53 Degradation";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)" CFLO008225-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO001681-PA 3 MetaCyc: PWY-4361;Reactome: R-HSA-1237112;KEGG: 00270+1.13.11.54 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Methionine salvage pathway";"Cysteine and methionine metabolism" CFLO012499-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO010627-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO000622-PA 3 Reactome: R-HSA-156590;KEGG: 00680+3.1.2.12;MetaCyc: PWY-1801 "Glutathione conjugation";"Methane metabolism";"Formaldehyde oxidation II (glutathione-dependent)" CFLO006707-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" CFLO008120-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO017671-PA 6 KEGG: 00670+2.1.2.3;MetaCyc: PWY-7234;Reactome: R-HSA-73817;KEGG: 00230+3.5.4.10+2.1.2.3;MetaCyc: PWY-6123;MetaCyc: PWY-6124 "One carbon pool by folate";"Inosine-5'-phosphate biosynthesis III";"Purine ribonucleoside monophosphate biosynthesis";"Purine metabolism";"Inosine-5'-phosphate biosynthesis I";"Inosine-5'-phosphate biosynthesis II" CFLO000979-PA 2 Reactome: R-HSA-3928665;Reactome: R-HSA-2682334 "EPH-ephrin mediated repulsion of cells";"EPH-Ephrin signaling" CFLO009319-PA 3 Reactome: R-HSA-9603798;Reactome: R-HSA-9033241;Reactome: R-HSA-8866654 "Class I peroxisomal membrane protein import";"Peroxisomal protein import";"E3 ubiquitin ligases ubiquitinate target proteins" CFLO009919-PA 4 Reactome: R-HSA-6811436;Reactome: R-HSA-6807878;Reactome: R-HSA-3371497;Reactome: R-HSA-2132295 "COPI-independent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"MHC class II antigen presentation" CFLO015301-PA 1 Reactome: R-HSA-112126 "ALKBH3 mediated reversal of alkylation damage" CFLO000498-PA 7 MetaCyc: PWY-6351;Reactome: R-HSA-1483226;MetaCyc: PWY-6352;MetaCyc: PWY-7625;KEGG: 00562+2.7.8.11;KEGG: 04070+2.7.8.11;KEGG: 00564+2.7.8.11 "D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Synthesis of PI";"3-phosphoinositide biosynthesis";"Phosphatidylinositol biosynthesis II (eukaryotes)";"Inositol phosphate metabolism";"Phosphatidylinositol signaling system";"Glycerophospholipid metabolism" CFLO013444-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO007084-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" CFLO006493-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO005219-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO015339-PA 5 MetaCyc: PWY-7426;KEGG: 00513+2.4.1.68;Reactome: R-HSA-975578;KEGG: 00510+2.4.1.68;KEGG: 00533+2.4.1.68 "Complex N-linked glycan biosynthesis (vertebrates)";"Various types of N-glycan biosynthesis";"Reactions specific to the complex N-glycan synthesis pathway";"N-Glycan biosynthesis";"Glycosaminoglycan biosynthesis - keratan sulfate" CFLO008578-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO002055-PA 5 KEGG: 00760+6.3.4.21;MetaCyc: PWY-5381;Reactome: R-HSA-6798695;Reactome: R-HSA-1368108;Reactome: R-HSA-197264 "Nicotinate and nicotinamide metabolism";"Pyridine nucleotide cycling (plants)";"Neutrophil degranulation";"BMAL1:CLOCK,NPAS2 activates circadian gene expression";"Nicotinamide salvaging" CFLO010821-PA 42 Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-8936459;Reactome: R-HSA-5334118;Reactome: R-HSA-110328;Reactome: R-HSA-5625886;Reactome: R-HSA-2559580;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-427389;Reactome: R-HSA-912446;Reactome: R-HSA-73772;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-2559586;Reactome: R-HSA-9018519;Reactome: R-HSA-9616222;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-110331;Reactome: R-HSA-977225;Reactome: R-HSA-3214847;Reactome: R-HSA-3214841;Reactome: R-HSA-201722;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-212300;Reactome: R-HSA-3214815;Reactome: R-HSA-73728;Reactome: R-HSA-8939236;Reactome: R-HSA-2559582;Reactome: R-HSA-606279;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638 "G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"DNA methylation";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Oxidative Stress Induced Senescence";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Meiotic recombination";"RNA Polymerase I Promoter Escape";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"HCMV Early Events";"Packaging Of Telomere Ends";"DNA Damage/Telomere Stress Induced Senescence";"Estrogen-dependent gene expression";"Transcriptional regulation of granulopoiesis";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Cleavage of the damaged purine";"Amyloid fiber formation";"HATs acetylate histones";"PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex";"Transcriptional regulation by small RNAs";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"PRC2 methylates histones and DNA";"HDACs deacetylate histones";"RNA Polymerase I Promoter Opening";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Senescence-Associated Secretory Phenotype (SASP)";"Deposition of new CENPA-containing nucleosomes at the centromere";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins" CFLO002075-PA 18 Reactome: R-HSA-1483166;KEGG: 00565+3.1.1.4;KEGG: 00591+3.1.1.4;KEGG: 00590+3.1.1.4;MetaCyc: PWY-7409;MetaCyc: PWY-7783;Reactome: R-HSA-1482801;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;MetaCyc: PWY-7416;MetaCyc: PWY-7417;Reactome: R-HSA-1482839;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482788;Reactome: R-HSA-1482922;MetaCyc: PWY-8051;Reactome: R-HSA-1482925;MetaCyc: PWY-8053 "Synthesis of PA";"Ether lipid metabolism";"Linoleic acid metabolism";"Arachidonic acid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Plasmalogen degradation";"Acyl chain remodelling of PS";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Phospholipid remodeling (phosphatidate, yeast)";"Acyl chain remodelling of PE";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PC";"Acyl chain remodelling of PI";"Anandamide biosynthesis I";"Acyl chain remodelling of PG";"Anandamide biosynthesis II" CFLO012259-PA 4 Reactome: R-HSA-445095;Reactome: R-HSA-6807878;Reactome: R-HSA-375165;Reactome: R-HSA-5673001 "Interaction between L1 and Ankyrins";"COPI-mediated anterograde transport";"NCAM signaling for neurite out-growth";"RAF/MAP kinase cascade" CFLO005879-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO014221-PA 2 MetaCyc: PWY-5041;KEGG: 00270+3.3.1.1 "S-adenosyl-L-methionine cycle II";"Cysteine and methionine metabolism" CFLO018793-PA 4 Reactome: R-HSA-5334118;Reactome: R-HSA-4655427;Reactome: R-HSA-212300;KEGG: 00270+2.1.1.37 "DNA methylation";"SUMOylation of DNA methylation proteins";"PRC2 methylates histones and DNA";"Cysteine and methionine metabolism" CFLO008934-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO006081-PA 8 KEGG: 00190+7.1.2.2;Reactome: R-HSA-917977;Reactome: R-HSA-77387;Reactome: R-HSA-9639288;KEGG: 00195+7.1.2.2;Reactome: R-HSA-983712;MetaCyc: PWY-7980;Reactome: R-HSA-1222556 "Oxidative phosphorylation";"Transferrin endocytosis and recycling";"Insulin receptor recycling";"Amino acids regulate mTORC1";"Photosynthesis";"Ion channel transport";"ATP biosynthesis";"ROS and RNS production in phagocytes" CFLO001506-PA 1 Reactome: R-HSA-5221030 "TET1,2,3 and TDG demethylate DNA" CFLO005789-PA 16 Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-156827;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557 "Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Translation initiation complex formation";"Peptide chain elongation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis" CFLO015437-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" CFLO001114-PA 3 Reactome: R-HSA-202427;Reactome: R-HSA-6798695;Reactome: R-HSA-6807004 "Phosphorylation of CD3 and TCR zeta chains";"Neutrophil degranulation";"Negative regulation of MET activity" CFLO011237-PA 3 KEGG: 00330+1.14.11.2;MetaCyc: PWY-7894;Reactome: R-HSA-1650814 "Arginine and proline metabolism";"Procollagen hydroxylation and glycosylation";"Collagen biosynthesis and modifying enzymes" CFLO015909-PA 6 Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-450604;Reactome: R-HSA-429958;Reactome: R-HSA-450513;Reactome: R-HSA-6791226 "ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"mRNA decay by 3' to 5' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO006235-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO004328-PA 3 Reactome: R-HSA-2206296;Reactome: R-HSA-2024096;Reactome: R-HSA-2024101 "MPS II - Hunter syndrome";"HS-GAG degradation";"CS/DS degradation" CFLO002906-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO012169-PA 8 KEGG: 05170+2.7.11.1;KEGG: 04926+2.7.11.1;Reactome: R-HSA-428540;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1 "Human immunodeficiency virus 1 infection";"Relaxin signaling pathway";"Activation of RAC1";"mTOR signaling pathway";"Thermogenesis";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Human papillomavirus infection" CFLO013702-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO009840-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO003011-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO018775-PA 3 Reactome: R-HSA-1236974;Reactome: R-HSA-1799339;Reactome: R-HSA-9609523 "ER-Phagosome pathway";"SRP-dependent cotranslational protein targeting to membrane";"Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" CFLO006976-PA 4 MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6902;MetaCyc: PWY-7822 "Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation II (Vibrio)";"Chitin degradation III (Serratia)" CFLO005368-PA 2 Reactome: R-HSA-110320;Reactome: R-HSA-983168 "Translesion Synthesis by POLH";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO012239-PA 5 MetaCyc: PWY-7391;Reactome: R-HSA-2426168;Reactome: R-HSA-191273;KEGG: 00900+2.7.4.2;MetaCyc: PWY-922 "Isoprene biosynthesis II (engineered)";"Activation of gene expression by SREBF (SREBP)";"Cholesterol biosynthesis";"Terpenoid backbone biosynthesis";"Mevalonate pathway I" CFLO013378-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO010966-PA 1 Reactome: R-HSA-901032 "ER Quality Control Compartment (ERQC)" CFLO011903-PA 5 Reactome: R-HSA-5693571;Reactome: R-HSA-69473;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-5689901 "Nonhomologous End-Joining (NHEJ)";"G2/M DNA damage checkpoint";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Metalloprotease DUBs" CFLO017896-PA 2 KEGG: 00900+2.7.7.60;MetaCyc: PWY-7560 "Terpenoid backbone biosynthesis";"Methylerythritol phosphate pathway II" CFLO013634-PA 2 Reactome: R-HSA-6798695;Reactome: R-HSA-532668 "Neutrophil degranulation";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle" CFLO000562-PA 5 Reactome: R-HSA-72163;Reactome: R-HSA-77595;Reactome: R-HSA-72187;Reactome: R-HSA-73856;Reactome: R-HSA-159231 "mRNA Splicing - Major Pathway";"Processing of Intronless Pre-mRNAs";"mRNA 3'-end processing";"RNA Polymerase II Transcription Termination";"Transport of Mature mRNA Derived from an Intronless Transcript" CFLO000007-PA 9 Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-167161;Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-6807505;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-73779 "RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"HIV Transcription Initiation";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO016778-PA 2 Reactome: R-HSA-1362409;Reactome: R-HSA-1268020 "Mitochondrial iron-sulfur cluster biogenesis";"Mitochondrial protein import" CFLO000009-PA 8 MetaCyc: PWY-5049;KEGG: 00350+1.14.16.2;MetaCyc: PWY-5394;Reactome: R-HSA-209905;MetaCyc: PWY-3581;KEGG: 00950+1.14.16.2;KEGG: 00790+1.14.16.2;MetaCyc: PWY-6133 "Rosmarinic acid biosynthesis II";"Tyrosine metabolism";"Betalamic acid biosynthesis";"Catecholamine biosynthesis";"(S)-reticuline biosynthesis I";"Isoquinoline alkaloid biosynthesis";"Folate biosynthesis";"(S)-reticuline biosynthesis II" CFLO003277-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO014395-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-975956 "SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO007023-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO002848-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO012357-PA 9 KEGG: 00350+2.6.1.5;KEGG: 00130+2.6.1.5;KEGG: 00960+2.6.1.5;Reactome: R-HSA-8963684;KEGG: 00270+2.6.1.5;KEGG: 00400+2.6.1.5;KEGG: 00360+2.6.1.5;KEGG: 00950+2.6.1.5;KEGG: 00401+2.6.1.5 "Tyrosine metabolism";"Ubiquinone and other terpenoid-quinone biosynthesis";"Tropane, piperidine and pyridine alkaloid biosynthesis";"Tyrosine catabolism";"Cysteine and methionine metabolism";"Phenylalanine, tyrosine and tryptophan biosynthesis";"Phenylalanine metabolism";"Isoquinoline alkaloid biosynthesis";"Novobiocin biosynthesis" CFLO012508-PA 2 Reactome: R-HSA-171319;Reactome: R-HSA-3214847 "Telomere Extension By Telomerase";"HATs acetylate histones" CFLO010724-PA 2 Reactome: R-HSA-9029569;Reactome: R-HSA-804914 "NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Transport of fatty acids" CFLO006413-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO008336-PA 9 Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-6804756;Reactome: R-HSA-167172;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-73779 "RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"Regulation of TP53 Activity through Phosphorylation";"Transcription of the HIV genome";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO011235-PA 3 Reactome: R-HSA-1650814;MetaCyc: PWY-7894;KEGG: 00330+1.14.11.2 "Collagen biosynthesis and modifying enzymes";"Procollagen hydroxylation and glycosylation";"Arginine and proline metabolism" CFLO013555-PA 8 KEGG: 00010+2.3.1.12;KEGG: 00020+2.3.1.12;KEGG: 00620+2.3.1.12;Reactome: R-HSA-3214858;Reactome: R-HSA-204174;Reactome: R-HSA-70268;Reactome: R-HSA-5362517;Reactome: R-HSA-389661 "Glycolysis / Gluconeogenesis";"Citrate cycle (TCA cycle)";"Pyruvate metabolism";"RMTs methylate histone arginines";"Regulation of pyruvate dehydrogenase (PDH) complex";"Pyruvate metabolism";"Signaling by Retinoic Acid";"Glyoxylate metabolism and glycine degradation" CFLO012143-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO015015-PA 14 MetaCyc: PWY-5080;MetaCyc: PWY-7036;MetaCyc: PWY-5972;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-6598;MetaCyc: PWY-7601;MetaCyc: PWY-7602;KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725;MetaCyc: PWY-7035 "Very long chain fatty acid biosynthesis I";"Very long chain fatty acid biosynthesis II";"Stearate biosynthesis I (animals)";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Sciadonate biosynthesis";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"(9Z)-tricosene biosynthesis" CFLO010548-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO002830-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-611105 "Citric acid cycle (TCA cycle)";"Respiratory electron transport" CFLO018671-PA 9 KEGG: 00511+3.2.1.52;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7822;MetaCyc: PWY-6902;KEGG: 00531+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00520+3.2.1.52;KEGG: 00603+3.2.1.52 "Other glycan degradation";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation III (Serratia)";"Chitin degradation II (Vibrio)";"Glycosaminoglycan degradation";"Various types of N-glycan biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Glycosphingolipid biosynthesis - globo and isoglobo series" CFLO000579-PA 11 KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-3270619;Reactome: R-HSA-1834949;Reactome: R-HSA-5693571;KEGG: 05170+2.7.11.1;Reactome: R-HSA-8866654;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1 "Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"IRF3-mediated induction of type I IFN";"Cytosolic sensors of pathogen-associated DNA";"Nonhomologous End-Joining (NHEJ)";"Human immunodeficiency virus 1 infection";"E3 ubiquitin ligases ubiquitinate target proteins";"Thermogenesis";"Relaxin signaling pathway";"mTOR signaling pathway" CFLO009267-PA 6 Reactome: R-HSA-3769402;Reactome: R-HSA-4411364;Reactome: R-HSA-8951430;Reactome: R-HSA-4641265;Reactome: R-HSA-4086398;Reactome: R-HSA-201722 "Deactivation of the beta-catenin transactivating complex";"Binding of TCF/LEF:CTNNB1 to target gene promoters";"RUNX3 regulates WNT signaling";"Repression of WNT target genes";"Ca2+ pathway";"Formation of the beta-catenin:TCF transactivating complex" CFLO000048-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" CFLO016301-PA 3 MetaCyc: PWY-7285;MetaCyc: PWY-6829;MetaCyc: PWY-7286 "Methylwyosine biosynthesis";"Trna methylation (yeast)";"7-(3-amino-3-carboxypropyl)-wyosine biosynthesis" CFLO008881-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO004825-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane" CFLO001395-PA 7 Reactome: R-HSA-9013507;Reactome: R-HSA-2660826;Reactome: R-HSA-2122948;Reactome: R-HSA-2644606;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-2691232 "NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants" CFLO002257-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO000377-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO015201-PA 3 MetaCyc: PWY-8106;Reactome: R-HSA-6782315;MetaCyc: PWY-6700 "Queuosine biosynthesis III (queuosine salvage)";"tRNA modification in the nucleus and cytosol";"Queuosine biosynthesis I (de novo)" CFLO004379-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO015922-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO000692-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO018032-PA 7 Reactome: R-HSA-5632684;Reactome: R-HSA-5362798;Reactome: R-HSA-5658034;Reactome: R-HSA-5632681;Reactome: R-HSA-5358346;Reactome: R-HSA-5635838;Reactome: R-HSA-373080 "Hedgehog 'on' state";"Release of Hh-Np from the secreting cell";"HHAT G278V abrogates palmitoylation of Hh-Np";"Ligand-receptor interactions";"Hedgehog ligand biogenesis";"Activation of SMO";"Class B/2 (Secretin family receptors)" CFLO008289-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO006963-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO007723-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" CFLO008158-PA 6 MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-6733;MetaCyc: PWY-7656;MetaCyc: PWY-5884;Reactome: R-HSA-9640463 "Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Sporopollenin precursors biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Wax biosynthesis" CFLO017850-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO013795-PA 6 Reactome: R-HSA-73856;Reactome: R-HSA-191859;Reactome: R-HSA-72165;Reactome: R-HSA-111367;Reactome: R-HSA-77588;Reactome: R-HSA-72163 "RNA Polymerase II Transcription Termination";"snRNP Assembly";"mRNA Splicing - Minor Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"mRNA Splicing - Major Pathway" CFLO018091-PA 1 Reactome: R-HSA-9603798 "Class I peroxisomal membrane protein import" CFLO002607-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO002150-PA 5 KEGG: 00270+6.3.2.3;Reactome: R-HSA-5579006;MetaCyc: PWY-8043;Reactome: R-HSA-174403;KEGG: 00480+6.3.2.3 "Cysteine and methionine metabolism";"Defective GSS causes Glutathione synthetase deficiency (GSS deficiency)";"Ophthalmate biosynthesis";"Glutathione synthesis and recycling";"Glutathione metabolism" CFLO007012-PA 40 Reactome: R-HSA-75955;Reactome: R-HSA-167162;Reactome: R-HSA-9018519;Reactome: R-HSA-167243;Reactome: R-HSA-113418;Reactome: R-HSA-167287;Reactome: R-HSA-5601884;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167246;Reactome: R-HSA-6782135;Reactome: R-HSA-167172;Reactome: R-HSA-203927;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-72165;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-6782210;Reactome: R-HSA-6803529;Reactome: R-HSA-168325;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-75953;Reactome: R-HSA-8851708;Reactome: R-HSA-6781827;Reactome: R-HSA-167152;Reactome: R-HSA-167242;Reactome: R-HSA-5617472;Reactome: R-HSA-6781823;Reactome: R-HSA-112382;Reactome: R-HSA-5578749;Reactome: R-HSA-73779;Reactome: R-HSA-6796648 "RNA Polymerase II Transcription Elongation";"RNA Polymerase II HIV Promoter Escape";"Estrogen-dependent gene expression";"Tat-mediated HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"HIV elongation arrest and recovery";"PIWI-interacting RNA (piRNA) biogenesis";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER";"Transcription of the HIV genome";"MicroRNA (miRNA) biogenesis";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"mRNA Splicing - Minor Pathway";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"Gap-filling DNA repair synthesis and ligation in TC-NER";"FGFR2 alternative splicing";"Viral Messenger RNA Synthesis";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation";"Signaling by FGFR2 IIIa TM";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV elongation complex in the absence of HIV Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Formation of TC-NER Pre-Incision Complex";"Formation of RNA Pol II elongation complex";"Transcriptional regulation by small RNAs";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes" CFLO006236-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO001974-PA 2 MetaCyc: PWY-7802;MetaCyc: PWY-7799 "N-end rule pathway II (prokaryotic)";"Arg/N-end rule pathway (eukaryotic)" CFLO008111-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" CFLO009016-PA 12 Reactome: R-HSA-380972;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-1632852;Reactome: R-HSA-9619483;KEGG: 05170+2.7.11.1;Reactome: R-HSA-5628897;Reactome: R-HSA-6804756;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1 "Energy dependent regulation of mTOR by LKB1-AMPK";"Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway";"Macroautophagy";"Activation of AMPK downstream of NMDARs";"Human immunodeficiency virus 1 infection";"TP53 Regulates Metabolic Genes";"Regulation of TP53 Activity through Phosphorylation";"Thermogenesis";"Relaxin signaling pathway";"mTOR signaling pathway" CFLO006346-PA 28 Reactome: R-HSA-5685938;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-5685942;Reactome: R-HSA-3371453;Reactome: R-HSA-5656121;Reactome: R-HSA-5651801;Reactome: R-HSA-174437;Reactome: R-HSA-69473;Reactome: R-HSA-5693616;Reactome: R-HSA-5696400;Reactome: R-HSA-110312;Reactome: R-HSA-5358606;Reactome: R-HSA-69166;Reactome: R-HSA-5656169;Reactome: R-HSA-5358565;Reactome: R-HSA-68962;Reactome: R-HSA-6783310;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-5696397;Reactome: R-HSA-5693607;Reactome: R-HSA-3371511;Reactome: R-HSA-110320;Reactome: R-HSA-912446;Reactome: R-HSA-5655862;Reactome: R-HSA-6804756 "HDR through Single Strand Annealing (SSA)";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"HDR through Homologous Recombination (HRR)";"Regulation of HSF1-mediated heat shock response";"Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair";"Removal of the Flap Intermediate from the C-strand";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange";"Dual Incision in GG-NER";"Translesion synthesis by REV1";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Removal of the Flap Intermediate";"Termination of translesion DNA synthesis";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Activation of the pre-replicative complex";"Fanconi Anemia Pathway";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Processing of DNA double-strand break ends";"HSF1 activation";"Translesion Synthesis by POLH";"Meiotic recombination";"Translesion synthesis by POLK";"Regulation of TP53 Activity through Phosphorylation" CFLO009091-PA 1 Reactome: R-HSA-2470946 "Cohesin Loading onto Chromatin" CFLO006876-PA 1 Reactome: R-HSA-1614517 "Sulfide oxidation to sulfate" CFLO005778-PA 10 Reactome: R-HSA-5685942;Reactome: R-HSA-5693579;Reactome: R-HSA-5685938;Reactome: R-HSA-3108214;Reactome: R-HSA-5693616;Reactome: R-HSA-5693554;Reactome: R-HSA-69473;Reactome: R-HSA-6804756;Reactome: R-HSA-5693568;Reactome: R-HSA-5693607 "HDR through Homologous Recombination (HRR)";"Homologous DNA Pairing and Strand Exchange";"HDR through Single Strand Annealing (SSA)";"SUMOylation of DNA damage response and repair proteins";"Presynaptic phase of homologous DNA pairing and strand exchange";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Processing of DNA double-strand break ends" CFLO002965-PA 2 Reactome: R-HSA-2132295;Reactome: R-HSA-877300 "MHC class II antigen presentation";"Interferon gamma signaling" CFLO007153-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO012487-PA 33 Reactome: R-HSA-9648025;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-168325;Reactome: R-HSA-2500257;Reactome: R-HSA-4570464;Reactome: R-HSA-141444;Reactome: R-HSA-159236;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-3232142;Reactome: R-HSA-168276;Reactome: R-HSA-170822;Reactome: R-HSA-4615885;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-3108214;Reactome: R-HSA-180746;Reactome: R-HSA-6784531;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-2467813;Reactome: R-HSA-191859;Reactome: R-HSA-5663220;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-9609690;Reactome: R-HSA-159227;Reactome: R-HSA-5619107;Reactome: R-HSA-68877;Reactome: R-HSA-159230 "EML4 and NUDC in mitotic spindle formation";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Viral Messenger RNA Synthesis";"Resolution of Sister Chromatid Cohesion";"SUMOylation of RNA binding proteins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Transcriptional regulation by small RNAs";"HCMV Late Events";"SUMOylation of ubiquitinylation proteins";"NS1 Mediated Effects on Host Pathways";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of DNA replication proteins";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein";"tRNA processing in the nucleus";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"Separation of Sister Chromatids";"snRNP Assembly";"RHO GTPases Activate Formins";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"HCMV Early Events";"Transport of the SLBP independent Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Mitotic Prometaphase";"Transport of the SLBP Dependant Mature mRNA" CFLO019744-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" CFLO004584-PA 1 Reactome: R-HSA-1237044 "Erythrocytes take up carbon dioxide and release oxygen" CFLO003010-PA 5 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-176974;Reactome: R-HSA-68867;Reactome: R-HSA-68949 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"Unwinding of DNA";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin" CFLO019450-PA 4 Reactome: R-HSA-6799198;Reactome: R-HSA-975138;Reactome: R-HSA-975871;Reactome: R-HSA-166058 "Complex I biogenesis";"TRAF6 mediated induction of NFkB and MAP kinases upon TLR7/8 or 9 activation";"MyD88 cascade initiated on plasma membrane";"MyD88:MAL(TIRAP) cascade initiated on plasma membrane" CFLO009043-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO004099-PA 1 Reactome: R-HSA-110320 "Translesion Synthesis by POLH" CFLO017592-PA 19 Reactome: R-HSA-9620244;Reactome: R-HSA-936837;Reactome: R-HSA-9617324;Reactome: R-HSA-6802952;Reactome: R-HSA-5578775;Reactome: R-HSA-111932;Reactome: R-HSA-5673000;Reactome: R-HSA-438066;Reactome: R-HSA-9609736;Reactome: R-HSA-399719;Reactome: R-HSA-5673001;Reactome: R-HSA-442982;Reactome: R-HSA-9022692;Reactome: R-HSA-9649948;Reactome: R-HSA-6802946;Reactome: R-HSA-5576892;Reactome: R-HSA-3371571;Reactome: R-HSA-6802955;Reactome: R-HSA-877300 "Long-term potentiation";"Ion transport by P-type ATPases";"Negative regulation of NMDA receptor-mediated neuronal transmission";"Signaling by BRAF and RAF fusions";"Ion homeostasis";"CaMK IV-mediated phosphorylation of CREB";"RAF activation";"Unblocking of NMDA receptors, glutamate binding and activation";"Assembly and cell surface presentation of NMDA receptors";"Trafficking of AMPA receptors";"RAF/MAP kinase cascade";"Ras activation upon Ca2+ influx through NMDA receptor";"Regulation of MECP2 expression and activity";"Signaling downstream of RAS mutants";"Signaling by moderate kinase activity BRAF mutants";"Phase 0 - rapid depolarisation";"HSF1-dependent transactivation";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Interferon gamma signaling" CFLO007690-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" CFLO000005-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO007267-PA 5 KEGG: 00290+4.2.1.33;KEGG: 00630+4.2.1.3;KEGG: 00720+4.2.1.3;KEGG: 00020+4.2.1.3;Reactome: R-HSA-917937 "Valine, leucine and isoleucine biosynthesis";"Glyoxylate and dicarboxylate metabolism";"Carbon fixation pathways in prokaryotes";"Citrate cycle (TCA cycle)";"Iron uptake and transport" CFLO012325-PA 3 Reactome: R-HSA-430039;Reactome: R-HSA-72163;Reactome: R-HSA-72165 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway" CFLO013892-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO012381-PA 1 Reactome: R-HSA-196783 "Coenzyme A biosynthesis" CFLO011309-PA 20 Reactome: R-HSA-110312;Reactome: R-HSA-69473;Reactome: R-HSA-5693616;Reactome: R-HSA-5696400;Reactome: R-HSA-5651801;Reactome: R-HSA-5656121;Reactome: R-HSA-69091;Reactome: R-HSA-5685942;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-5685938;Reactome: R-HSA-6804756;Reactome: R-HSA-5655862;Reactome: R-HSA-110320;Reactome: R-HSA-5693607;Reactome: R-HSA-5696397;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-174411;Reactome: R-HSA-5656169 "Translesion synthesis by REV1";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange";"Dual Incision in GG-NER";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLI";"Polymerase switching";"HDR through Homologous Recombination (HRR)";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"HDR through Single Strand Annealing (SSA)";"Regulation of TP53 Activity through Phosphorylation";"Translesion synthesis by POLK";"Translesion Synthesis by POLH";"Processing of DNA double-strand break ends";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Polymerase switching on the C-strand of the telomere";"Termination of translesion DNA synthesis" CFLO004466-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO008248-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO000948-PA 1 Reactome: R-HSA-200425 "Carnitine metabolism" CFLO006751-PA 6 Reactome: R-HSA-194840;KEGG: 04070+3.1.3.36;Reactome: R-HSA-1855183;Reactome: R-HSA-1855204;MetaCyc: PWY-6368;KEGG: 00562+3.1.3.36 "Rho GTPase cycle";"Phosphatidylinositol signaling system";"Synthesis of IP2, IP, and Ins in the cytosol";"Synthesis of IP3 and IP4 in the cytosol";"3-phosphoinositide degradation";"Inositol phosphate metabolism" CFLO014207-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" CFLO011253-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO013990-PA 2 KEGG: 00230+4.6.1.1;Reactome: R-HSA-196819 "Purine metabolism";"Vitamin B1 (thiamin) metabolism" CFLO004382-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO011248-PA 1 Reactome: R-HSA-430039 "mRNA decay by 5' to 3' exoribonuclease" CFLO001309-PA 9 Reactome: R-HSA-6807505;Reactome: R-HSA-167162;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-167161;Reactome: R-HSA-73779 "RNA polymerase II transcribes snRNA genes";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"HIV Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO009464-PA 3 Reactome: R-HSA-5423646;MetaCyc: PWY-7533;Reactome: R-HSA-2142691 "Aflatoxin activation and detoxification";"Gliotoxin biosynthesis";"Synthesis of Leukotrienes (LT) and Eoxins (EX)" CFLO008273-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO008246-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO012401-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-73856;Reactome: R-HSA-72187 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination";"mRNA 3'-end processing" CFLO013544-PA 5 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825;Reactome: R-HSA-190873;Reactome: R-HSA-3928665;Reactome: R-HSA-196025 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis";"Gap junction degradation";"EPH-ephrin mediated repulsion of cells";"Formation of annular gap junctions" CFLO004325-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane" CFLO007834-PA 10 MetaCyc: PWY-7112;MetaCyc: PWY-8001;MetaCyc: PWY-6842;KEGG: 00460+2.3.2.2;MetaCyc: PWY-7559;KEGG: 00430+2.3.2.2;MetaCyc: PWY-5826;KEGG: 00480+2.3.2.2+3.4.19.13;MetaCyc: PWY-4041;MetaCyc: PWY-4061 "4-hydroxy-2-nonenal detoxification";"Felinine and 3-methyl-3-sulfanylbutan-1-ol biosynthesis";"Glutathione-mediated detoxification II";"Cyanoamino acid metabolism";"Glutathione degradation (DUG pathway";"Taurine and hypotaurine metabolism";"Hypoglycin biosynthesis";"Glutathione metabolism";"Gamma-glutamyl cycle";"Glutathione-mediated detoxification I" CFLO019181-PA 13 KEGG: 00511+3.2.1.52;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7822;MetaCyc: PWY-7883;MetaCyc: PWY-6902;KEGG: 00531+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00603+3.2.1.52;Reactome: R-HSA-2024101;KEGG: 00520+3.2.1.52;Reactome: R-HSA-2022857;Reactome: R-HSA-1660662;Reactome: R-HSA-2160916 "Other glycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation III (Serratia)";"Anhydromuropeptides recycling II";"Chitin degradation II (Vibrio)";"Glycosaminoglycan degradation";"Various types of N-glycan biosynthesis";"Glycosphingolipid biosynthesis - globo and isoglobo series";"CS/DS degradation";"Amino sugar and nucleotide sugar metabolism";"Keratan sulfate degradation";"Glycosphingolipid metabolism";"Hyaluronan uptake and degradation" CFLO014186-PA 26 Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-3371497;Reactome: R-HSA-389960;Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-190861;Reactome: R-HSA-9609736;Reactome: R-HSA-5626467;Reactome: R-HSA-68877;Reactome: R-HSA-1445148;Reactome: R-HSA-2132295;Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-6811434;Reactome: R-HSA-5663220;Reactome: R-HSA-437239;Reactome: R-HSA-8955332;Reactome: R-HSA-8852276;Reactome: R-HSA-2500257;Reactome: R-HSA-380320;Reactome: R-HSA-9646399;Reactome: R-HSA-2467813;Reactome: R-HSA-9619483;Reactome: R-HSA-389977;Reactome: R-HSA-9648025 "Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Formation of tubulin folding intermediates by CCT/TriC";"HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"Gap junction assembly";"Assembly and cell surface presentation of NMDA receptors";"RHO GTPases activate IQGAPs";"Mitotic Prometaphase";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"MHC class II antigen presentation";"COPI-mediated anterograde transport";"Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic";"RHO GTPases Activate Formins";"Recycling pathway of L1";"Carboxyterminal post-translational modifications of tubulin";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Resolution of Sister Chromatid Cohesion";"Recruitment of NuMA to mitotic centrosomes";"Aggrephagy";"Separation of Sister Chromatids";"Activation of AMPK downstream of NMDARs";"Post-chaperonin tubulin folding pathway";"EML4 and NUDC in mitotic spindle formation" CFLO003075-PA 7 Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-6811434;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-2500257 "Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"COPI-dependent Golgi-to-ER retrograde traffic";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"Resolution of Sister Chromatid Cohesion" CFLO002635-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO012019-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO001088-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO003353-PA 10 MetaCyc: PWY-5691;Reactome: R-HSA-2453902;Reactome: R-HSA-6798695;Reactome: R-HSA-977225;KEGG: 00230+3.5.2.17;MetaCyc: PWY-7394;Reactome: R-HSA-3000171;Reactome: R-HSA-2453864;Reactome: R-HSA-975634;MetaCyc: PWY-7849 "Urate conversion to allantoin I";"The canonical retinoid cycle in rods (twilight vision)";"Neutrophil degranulation";"Amyloid fiber formation";"Purine metabolism";"Urate conversion to allantoin II";"Non-integrin membrane-ECM interactions";"Retinoid cycle disease events";"Retinoid metabolism and transport";"Urate conversion to allantoin III" CFLO016551-PA 2 Reactome: R-HSA-8939243;Reactome: R-HSA-3214858 "RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RMTs methylate histone arginines" CFLO003580-PA 2 Reactome: R-HSA-3371599;Reactome: R-HSA-196780 "Defective HLCS causes multiple carboxylase deficiency";"Biotin transport and metabolism" CFLO002751-PA 1 Reactome: R-HSA-5578775 "Ion homeostasis" CFLO008622-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO003678-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO007445-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO009597-PA 16 MetaCyc: PWY-2221;MetaCyc: PWY-1622;Reactome: R-HSA-70171;MetaCyc: PWY-5723;MetaCyc: PWY-6901;MetaCyc: PWY-7124;KEGG: 00680+4.2.1.11;MetaCyc: PWY-5484;MetaCyc: PWY-6142;MetaCyc: PWY-7003;Reactome: R-HSA-70263;KEGG: 00010+4.2.1.11;MetaCyc: PWY-8004;MetaCyc: PWY-6886;MetaCyc: PWY-1042;MetaCyc: PWY-7218 "Entner-Doudoroff pathway III (semi-phosphorylative)";"Formaldehyde assimilation I (serine pathway)";"Glycolysis";"Rubisco shunt";"Superpathway of glucose and xylose degradation";"Ethylene biosynthesis V (engineered)";"Methane metabolism";"Glycolysis II (from fructose 6-phosphate)";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycerol degradation to butanol";"Gluconeogenesis";"Glycolysis / Gluconeogenesis";"Entner-Doudoroff pathway I";"1-butanol autotrophic biosynthesis (engineered)";"Glycolysis IV (plant cytosol)";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)" CFLO012167-PA 16 Reactome: R-HSA-8853884;Reactome: R-HSA-2467813;Reactome: R-HSA-176409;Reactome: R-HSA-176412;Reactome: R-HSA-174178;Reactome: R-HSA-141430;Reactome: R-HSA-174154;Reactome: R-HSA-179409;Reactome: R-HSA-983168;Reactome: R-HSA-176407;Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-2559582;Reactome: R-HSA-174084;Reactome: R-HSA-174184;Reactome: R-HSA-174048 "Transcriptional Regulation by VENTX";"Separation of Sister Chromatids";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Phosphorylation of the APC/C";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Inactivation of APC/C via direct inhibition of the APC/C complex";"APC/C:Cdc20 mediated degradation of Securin";"APC-Cdc20 mediated degradation of Nek2A";"Antigen processing: Ubiquitination & Proteasome degradation";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"Senescence-Associated Secretory Phenotype (SASP)";"Autodegradation of Cdh1 by Cdh1:APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B" CFLO007261-PA 13 MetaCyc: PWY-6351;Reactome: R-HSA-2029485;Reactome: R-HSA-1855204;MetaCyc: PWY-8052;MetaCyc: PWY-6367;Reactome: R-HSA-2871796;Reactome: R-HSA-2424491;KEGG: 00562+3.1.4.11;Reactome: R-HSA-202433;Reactome: R-HSA-9027277;KEGG: 04070+3.1.4.11;Reactome: R-HSA-2871809;MetaCyc: PWY-7039 "D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"Role of phospholipids in phagocytosis";"Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis";"D-myo-inositol-5-phosphate metabolism";"FCERI mediated MAPK activation";"DAP12 signaling";"Inositol phosphate metabolism";"Generation of second messenger molecules";"Erythropoietin activates Phospholipase C gamma (PLCG)";"Phosphatidylinositol signaling system";"FCERI mediated Ca+2 mobilization";"Phosphatidate metabolism, as a signaling molecule" CFLO005278-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO006657-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO008860-PA 5 Reactome: R-HSA-381183;Reactome: R-HSA-2426168;Reactome: R-HSA-9614657;Reactome: R-HSA-1989781;Reactome: R-HSA-380994 "ATF6 (ATF6-alpha) activates chaperone genes";"Activation of gene expression by SREBF (SREBP)";"FOXO-mediated transcription of cell death genes";"PPARA activates gene expression";"ATF4 activates genes in response to endoplasmic reticulum stress" CFLO005378-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" CFLO004819-PA 27 Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-3301854;Reactome: R-HSA-165054;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-5619107;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-168333 "Transcriptional regulation by small RNAs";"HCMV Late Events";"snRNP Assembly";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"Nuclear Pore Complex (NPC) Disassembly";"Rev-mediated nuclear export of HIV RNA";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery" CFLO011459-PA 5 Reactome: R-HSA-72163;Reactome: R-HSA-72187;Reactome: R-HSA-77595;Reactome: R-HSA-159231;Reactome: R-HSA-73856 "mRNA Splicing - Major Pathway";"mRNA 3'-end processing";"Processing of Intronless Pre-mRNAs";"Transport of Mature mRNA Derived from an Intronless Transcript";"RNA Polymerase II Transcription Termination" CFLO006108-PA 3 KEGG: 00240+1.3.5.2;MetaCyc: PWY-5686;Reactome: R-HSA-500753 "Pyrimidine metabolism";"UMP biosynthesis I";"Pyrimidine biosynthesis" CFLO002948-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO012564-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO005046-PA 13 Reactome: R-HSA-2160916;Reactome: R-HSA-1660662;Reactome: R-HSA-2022857;Reactome: R-HSA-2024101;KEGG: 00603+3.2.1.52;KEGG: 00520+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00531+3.2.1.52;MetaCyc: PWY-6902;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7822;KEGG: 00511+3.2.1.52 "Hyaluronan uptake and degradation";"Glycosphingolipid metabolism";"Keratan sulfate degradation";"CS/DS degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Amino sugar and nucleotide sugar metabolism";"Various types of N-glycan biosynthesis";"Glycosaminoglycan degradation";"Chitin degradation II (Vibrio)";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation III (Serratia)";"Other glycan degradation" CFLO008163-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO011804-PA 2 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603 "DNA Damage Recognition in GG-NER";"UCH proteinases" CFLO005735-PA 2 Reactome: R-HSA-5673001;Reactome: R-HSA-8853659 "RAF/MAP kinase cascade";"RET signaling" CFLO005594-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO000694-PA 2 Reactome: R-HSA-2142691;Reactome: R-HSA-2142700 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Synthesis of Lipoxins (LX)" CFLO002679-PA 3 Reactome: R-HSA-72163;Reactome: R-HSA-72165;Reactome: R-HSA-191859 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway";"snRNP Assembly" CFLO013917-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO004631-PA 3 MetaCyc: PWY-6857;Reactome: R-HSA-192456;KEGG: 00561+3.1.1.3 "Retinol biosynthesis";"Digestion of dietary lipid";"Glycerolipid metabolism" CFLO004610-PA 3 KEGG: 00520+1.1.1.271;Reactome: R-HSA-6787639;KEGG: 00051+1.1.1.271 "Amino sugar and nucleotide sugar metabolism";"GDP-fucose biosynthesis";"Fructose and mannose metabolism" CFLO008820-PA 5 Reactome: R-HSA-389957;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-389960;Reactome: R-HSA-390450 "Prefoldin mediated transfer of substrate to CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Formation of tubulin folding intermediates by CCT/TriC";"Folding of actin by CCT/TriC" CFLO017347-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" CFLO000072-PA 1 Reactome: R-HSA-380320 "Recruitment of NuMA to mitotic centrosomes" CFLO019590-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO006739-PA 1 Reactome: R-HSA-9609523 "Insertion of tail-anchored proteins into the endoplasmic reticulum membrane" CFLO015973-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO017593-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" CFLO011917-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO005718-PA 1 Reactome: R-HSA-525793 "Myogenesis" CFLO005891-PA 1 Reactome: R-HSA-381753 "Olfactory Signaling Pathway" CFLO014805-PA 57 Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-5689603;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764 "APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Neutrophil degranulation";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"UCH proteinases";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling" CFLO017653-PA 1 Reactome: R-HSA-9640463 "Wax biosynthesis" CFLO001583-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" CFLO015600-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO006960-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO006591-PA 10 MetaCyc: PWY-6527;Reactome: R-HSA-70370;KEGG: 00520+5.1.3.2;MetaCyc: PWY-7328;MetaCyc: PWY-6397;MetaCyc: PWY-3821;KEGG: 00052+5.1.3.2;MetaCyc: PWY-7344;Reactome: R-HSA-5609977;MetaCyc: PWY-6317 "Stachyose degradation";"Galactose catabolism";"Amino sugar and nucleotide sugar metabolism";"Superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis";"Mycolyl-arabinogalactan-peptidoglycan complex biosynthesis";"D-galactose detoxification";"Galactose metabolism";"UDP-alpha-D-galactose biosynthesis";"Defective GALE can cause Epimerase-deficiency galactosemia (EDG)";"D-galactose degradation I (Leloir pathway)" CFLO007760-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO005713-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" CFLO011745-PA 19 Reactome: R-HSA-8964046;Reactome: R-HSA-8856828;Reactome: R-HSA-8964038;Reactome: R-HSA-975634;Reactome: R-HSA-8957275;Reactome: R-HSA-381426;Reactome: R-HSA-3000480;Reactome: R-HSA-3000497;Reactome: R-HSA-3000484;Reactome: R-HSA-3000471;Reactome: R-HSA-8964041;Reactome: R-HSA-432142;Reactome: R-HSA-8964026;Reactome: R-HSA-8866423;Reactome: R-HSA-8856825;Reactome: R-HSA-8963901;Reactome: R-HSA-5686938;Reactome: R-HSA-202733;Reactome: R-HSA-8963888 "VLDL clearance";"Clathrin-mediated endocytosis";"LDL clearance";"Retinoid metabolism and transport";"Post-translational protein phosphorylation";"Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)";"Scavenging by Class A Receptors";"Scavenging by Class H Receptors";"Scavenging by Class F Receptors";"Scavenging by Class B Receptors";"LDL remodeling";"Platelet sensitization by LDL";"Chylomicron clearance";"VLDL assembly";"Cargo recognition for clathrin-mediated endocytosis";"Chylomicron remodeling";"Regulation of TLR by endogenous ligand";"Cell surface interactions at the vascular wall";"Chylomicron assembly" CFLO015598-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO012323-PA 20 Reactome: R-HSA-110312;Reactome: R-HSA-69473;Reactome: R-HSA-5696400;Reactome: R-HSA-5693616;Reactome: R-HSA-5656121;Reactome: R-HSA-5651801;Reactome: R-HSA-69091;Reactome: R-HSA-5685942;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-5685938;Reactome: R-HSA-6804756;Reactome: R-HSA-5655862;Reactome: R-HSA-110320;Reactome: R-HSA-5693607;Reactome: R-HSA-5696397;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-174411;Reactome: R-HSA-5656169 "Translesion synthesis by REV1";"G2/M DNA damage checkpoint";"Dual Incision in GG-NER";"Presynaptic phase of homologous DNA pairing and strand exchange";"Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair";"Polymerase switching";"HDR through Homologous Recombination (HRR)";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"HDR through Single Strand Annealing (SSA)";"Regulation of TP53 Activity through Phosphorylation";"Translesion synthesis by POLK";"Translesion Synthesis by POLH";"Processing of DNA double-strand break ends";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Polymerase switching on the C-strand of the telomere";"Termination of translesion DNA synthesis" CFLO006759-PA 2 Reactome: R-HSA-917729;Reactome: R-HSA-9610379 "Endosomal Sorting Complex Required For Transport (ESCRT)";"HCMV Late Events" CFLO007178-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO014828-PA 4 MetaCyc: PWY-8004;KEGG: 00480+1.1.1.49;MetaCyc: PWY-7268;KEGG: 00030+1.1.1.49 "Entner-Doudoroff pathway I";"Glutathione metabolism";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Pentose phosphate pathway" CFLO001509-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO002920-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO003335-PA 5 Reactome: R-HSA-5685938;Reactome: R-HSA-6782135;Reactome: R-HSA-6783310;Reactome: R-HSA-5696400;Reactome: R-HSA-5696395 "HDR through Single Strand Annealing (SSA)";"Dual incision in TC-NER";"Fanconi Anemia Pathway";"Dual Incision in GG-NER";"Formation of Incision Complex in GG-NER" CFLO004186-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO006630-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957 "SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO002275-PA 1 KEGG: 00531+3.2.1.35 "Glycosaminoglycan degradation" CFLO019169-PA 3 Reactome: R-HSA-162658;Reactome: R-HSA-204005;Reactome: R-HSA-6807878 "Golgi Cisternae Pericentriolar Stack Reorganization";"COPII-mediated vesicle transport";"COPI-mediated anterograde transport" CFLO014841-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" CFLO018148-PA 2 Reactome: R-HSA-3371599;Reactome: R-HSA-196780 "Defective HLCS causes multiple carboxylase deficiency";"Biotin transport and metabolism" CFLO014481-PA 1 Reactome: R-HSA-5657655 "MGMT-mediated DNA damage reversal" CFLO016375-PA 3 Reactome: R-HSA-159236;Reactome: R-HSA-73856;Reactome: R-HSA-72187 "Transport of Mature mRNA derived from an Intron-Containing Transcript";"RNA Polymerase II Transcription Termination";"mRNA 3'-end processing" CFLO002960-PA 2 Reactome: R-HSA-4641265;Reactome: R-HSA-5339700 "Repression of WNT target genes";"TCF7L2 mutants don't bind CTBP" CFLO003647-PA 1 Reactome: R-HSA-1483166 "Synthesis of PA" CFLO016878-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO010710-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO000685-PA 13 MetaCyc: PWY-7226;MetaCyc: PWY-6545;MetaCyc: PWY-7220;KEGG: 00240+1.17.4.1;KEGG: 00480+1.17.4.1;KEGG: 00230+1.17.4.1;MetaCyc: PWY-7184;Reactome: R-HSA-499943;MetaCyc: PWY-7210;MetaCyc: PWY-7227;MetaCyc: PWY-7198;KEGG: 00983+1.17.4.1;MetaCyc: PWY-7222 "Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine metabolism";"Glutathione metabolism";"Purine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Adenosine deoxyribonucleotides de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Drug metabolism - other enzymes";"Guanosine deoxyribonucleotides de novo biosynthesis II" CFLO013622-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO011372-PA 2 Reactome: R-HSA-2408522;Reactome: R-HSA-379716 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation" CFLO007975-PA 3 Reactome: R-HSA-5685942;Reactome: R-HSA-5656169;Reactome: R-HSA-110320 "HDR through Homologous Recombination (HRR)";"Termination of translesion DNA synthesis";"Translesion Synthesis by POLH" CFLO014338-PA 2 KEGG: 00970+6.3.5.7;Reactome: R-HSA-2142753 "Aminoacyl-tRNA biosynthesis";"Arachidonic acid metabolism" CFLO006319-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO004161-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" CFLO008779-PA 14 MetaCyc: PWY-7602;MetaCyc: PWY-7601;MetaCyc: PWY-6598;MetaCyc: PWY-7036;MetaCyc: PWY-5972;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-5080;MetaCyc: PWY-7035;Reactome: R-HSA-75876;MetaCyc: PWY-7725;MetaCyc: PWY-8041;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199 "Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Sciadonate biosynthesis";"Very long chain fatty acid biosynthesis II";"Stearate biosynthesis I (animals)";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Very long chain fatty acid biosynthesis I";"(9Z)-tricosene biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation" CFLO009380-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO012041-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO009733-PA 29 Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-5696395;Reactome: R-HSA-5696397;Reactome: R-HSA-5358606;Reactome: R-HSA-69166;Reactome: R-HSA-5358565;Reactome: R-HSA-68962;Reactome: R-HSA-5656169;Reactome: R-HSA-6783310;Reactome: R-HSA-912446;Reactome: R-HSA-5655862;Reactome: R-HSA-6804756;Reactome: R-HSA-3371511;Reactome: R-HSA-5693607;Reactome: R-HSA-110320;Reactome: R-HSA-5685942;Reactome: R-HSA-5685938;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-69473;Reactome: R-HSA-174437;Reactome: R-HSA-5693616;Reactome: R-HSA-3108214;Reactome: R-HSA-5696400;Reactome: R-HSA-110312;Reactome: R-HSA-3371453;Reactome: R-HSA-5656121;Reactome: R-HSA-5651801 "Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Formation of Incision Complex in GG-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Removal of the Flap Intermediate";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Activation of the pre-replicative complex";"Termination of translesion DNA synthesis";"Fanconi Anemia Pathway";"Meiotic recombination";"Translesion synthesis by POLK";"Regulation of TP53 Activity through Phosphorylation";"HSF1 activation";"Processing of DNA double-strand break ends";"Translesion Synthesis by POLH";"HDR through Homologous Recombination (HRR)";"HDR through Single Strand Annealing (SSA)";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"G2/M DNA damage checkpoint";"Removal of the Flap Intermediate from the C-strand";"Presynaptic phase of homologous DNA pairing and strand exchange";"SUMOylation of DNA damage response and repair proteins";"Dual Incision in GG-NER";"Translesion synthesis by REV1";"Regulation of HSF1-mediated heat shock response";"Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair" CFLO007286-PA 2 Reactome: R-HSA-390522;Reactome: R-HSA-445355 "Striated Muscle Contraction";"Smooth Muscle Contraction" CFLO004183-PA 27 Reactome: R-HSA-5578749;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-180746;Reactome: R-HSA-165054;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-168333 "Transcriptional regulation by small RNAs";"snRNP Assembly";"HCMV Late Events";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein";"Rev-mediated nuclear export of HIV RNA";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery" CFLO013289-PA 4 Reactome: R-HSA-351202;KEGG: 00270+2.5.1.16;KEGG: 00330+2.5.1.16;KEGG: 00480+2.5.1.16 "Metabolism of polyamines";"Cysteine and methionine metabolism";"Arginine and proline metabolism";"Glutathione metabolism" CFLO014050-PA 1 Reactome: R-HSA-6807878 "COPI-mediated anterograde transport" CFLO001098-PA 19 Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-187577;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-2559586;Reactome: R-HSA-2559582;Reactome: R-HSA-5693607;Reactome: R-HSA-69656;Reactome: R-HSA-69273;Reactome: R-HSA-69563;Reactome: R-HSA-6804756;Reactome: R-HSA-68911;Reactome: R-HSA-6804116;Reactome: R-HSA-1538133;Reactome: R-HSA-170145;Reactome: R-HSA-6804757;Reactome: R-HSA-1362300;Reactome: R-HSA-68949 "CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"SCF(Skp2)-mediated degradation of p27/p21";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"DNA Damage/Telomere Stress Induced Senescence";"Senescence-Associated Secretory Phenotype (SASP)";"Processing of DNA double-strand break ends";"Cyclin A:Cdk2-associated events at S phase entry";"Cyclin A/B1/B2 associated events during G2/M transition";"p53-Dependent G1 DNA Damage Response";"Regulation of TP53 Activity through Phosphorylation";"G2 Phase";"TP53 Regulates Transcription of Genes Involved in G1 Cell Cycle Arrest";"G0 and Early G1";"Phosphorylation of proteins involved in the G2/M transition by Cyclin A:Cdc2 complexes";"Regulation of TP53 Degradation";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Orc1 removal from chromatin" CFLO008286-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO002121-PA 1 Reactome: R-HSA-5628897 "TP53 Regulates Metabolic Genes" CFLO013982-PA 6 Reactome: R-HSA-975578;KEGG: 00513+2.4.1.143;KEGG: 00510+2.4.1.143;MetaCyc: PWY-7920;Reactome: R-HSA-4793952;MetaCyc: PWY-7426 "Reactions specific to the complex N-glycan synthesis pathway";"Various types of N-glycan biosynthesis";"N-Glycan biosynthesis";"Complex N-linked glycan biosynthesis (plants)";"Defective MGAT2 causes MGAT2-CDG (CDG-2a)";"Complex N-linked glycan biosynthesis (vertebrates)" CFLO004108-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO005552-PA 3 Reactome: R-HSA-72163;Reactome: R-HSA-72165;Reactome: R-HSA-191859 "mRNA Splicing - Major Pathway";"mRNA Splicing - Minor Pathway";"snRNP Assembly" CFLO000598-PA 12 Reactome: R-HSA-68877;Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-3371497;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-9646399;Reactome: R-HSA-6807878;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257;Reactome: R-HSA-2132295 "Mitotic Prometaphase";"HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Aggrephagy";"COPI-mediated anterograde transport";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion";"MHC class II antigen presentation" CFLO006019-PA 3 Reactome: R-HSA-110314;Reactome: R-HSA-5689880;Reactome: R-HSA-6783310 "Recognition of DNA damage by PCNA-containing replication complex";"Ub-specific processing proteases";"Fanconi Anemia Pathway" CFLO012595-PA 4 Reactome: R-HSA-3214847;MetaCyc: PWY-7437;KEGG: 00514+2.4.1.255;Reactome: R-HSA-5689603 "HATs acetylate histones";"Protein O-[N-acetyl]-glucosylation";"Other types of O-glycan biosynthesis";"UCH proteinases" CFLO018080-PA 6 Reactome: R-HSA-917977;Reactome: R-HSA-9639288;Reactome: R-HSA-77387;Reactome: R-HSA-983712;Reactome: R-HSA-6798695;Reactome: R-HSA-1222556 "Transferrin endocytosis and recycling";"Amino acids regulate mTORC1";"Insulin receptor recycling";"Ion channel transport";"Neutrophil degranulation";"ROS and RNS production in phagocytes" CFLO009450-PA 7 Reactome: R-HSA-380259;Reactome: R-HSA-380270;Reactome: R-HSA-380320;Reactome: R-HSA-8854518;Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380284 "Loss of Nlp from mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes";"AURKA Activation by TPX2";"Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Loss of proteins required for interphase microtubule organization from the centrosome" CFLO000836-PA 2 Reactome: R-HSA-2132295;Reactome: R-HSA-877300 "MHC class II antigen presentation";"Interferon gamma signaling" CFLO018838-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO017507-PA 3 Reactome: R-HSA-162658;Reactome: R-HSA-204005;Reactome: R-HSA-6807878 "Golgi Cisternae Pericentriolar Stack Reorganization";"COPII-mediated vesicle transport";"COPI-mediated anterograde transport" CFLO007160-PA 1 Reactome: R-HSA-427975 "Proton/oligopeptide cotransporters" CFLO004072-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO012155-PA 2 KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" CFLO012518-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO016135-PA 1 MetaCyc: PWY-6938 "NADH repair" CFLO005738-PA 2 Reactome: R-HSA-8853659;Reactome: R-HSA-5673001 "RET signaling";"RAF/MAP kinase cascade" CFLO000360-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO001520-PA 6 Reactome: R-HSA-5654712;Reactome: R-HSA-5654693;Reactome: R-HSA-5673001;Reactome: R-HSA-5654706;Reactome: R-HSA-9028731;Reactome: R-HSA-5654700 "FRS-mediated FGFR4 signaling";"FRS-mediated FGFR1 signaling";"RAF/MAP kinase cascade";"FRS-mediated FGFR3 signaling";"Activated NTRK2 signals through FRS2 and FRS3";"FRS-mediated FGFR2 signaling" CFLO004115-PA 1 Reactome: R-HSA-1362409 "Mitochondrial iron-sulfur cluster biogenesis" CFLO005863-PA 1 Reactome: R-HSA-5689603 "UCH proteinases" CFLO001115-PA 2 Reactome: R-HSA-425397;Reactome: R-HSA-5619061 "Transport of vitamins, nucleosides, and related molecules";"Defective SLC33A1 causes spastic paraplegia 42 (SPG42)" CFLO006170-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" CFLO008882-PA 1 MetaCyc: PWY-7942 "5-oxo-L-proline metabolism" CFLO014021-PA 52 Reactome: R-HSA-6807505;Reactome: R-HSA-72203;Reactome: R-HSA-76066;Reactome: R-HSA-72165;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-1834949;Reactome: R-HSA-167238;Reactome: R-HSA-203927;Reactome: R-HSA-167172;Reactome: R-HSA-6803529;Reactome: R-HSA-6782210;Reactome: R-HSA-75953;Reactome: R-HSA-8851708;Reactome: R-HSA-6781827;Reactome: R-HSA-167200;Reactome: R-HSA-73980;Reactome: R-HSA-674695;Reactome: R-HSA-168325;Reactome: R-HSA-73779;Reactome: R-HSA-73762;Reactome: R-HSA-6796648;Reactome: R-HSA-6781823;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-112382;Reactome: R-HSA-76071;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-167162;Reactome: R-HSA-427413;Reactome: R-HSA-749476;Reactome: R-HSA-73863;Reactome: R-HSA-75955;Reactome: R-HSA-73772;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-73780;Reactome: R-HSA-9018519;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-5601884;Reactome: R-HSA-76061;Reactome: R-HSA-167246;Reactome: R-HSA-6782135 "RNA polymerase II transcribes snRNA genes";"Processing of Capped Intron-Containing Pre-mRNA";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"mRNA Splicing - Minor Pathway";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"Cytosolic sensors of pathogen-associated DNA";"Pausing and recovery of Tat-mediated HIV elongation";"MicroRNA (miRNA) biogenesis";"Transcription of the HIV genome";"FGFR2 alternative splicing";"Gap-filling DNA repair synthesis and ligation in TC-NER";"RNA Polymerase II Transcription Initiation";"Signaling by FGFR2 IIIa TM";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase III Transcription Termination";"RNA Polymerase II Pre-transcription Events";"Viral Messenger RNA Synthesis";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase I Transcription Initiation";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of TC-NER Pre-Incision Complex";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"Formation of RNA Pol II elongation complex";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase II HIV Promoter Escape";"NoRC negatively regulates rRNA expression";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase I Transcription Termination";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Promoter Escape";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"RNA Polymerase III Chain Elongation";"Estrogen-dependent gene expression";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"PIWI-interacting RNA (piRNA) biogenesis";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Tat-mediated elongation of the HIV-1 transcript";"Dual incision in TC-NER" CFLO000147-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport" CFLO008569-PA 14 Reactome: R-HSA-167200;Reactome: R-HSA-167238;Reactome: R-HSA-674695;Reactome: R-HSA-167158;Reactome: R-HSA-167290;Reactome: R-HSA-75955;Reactome: R-HSA-6796648;Reactome: R-HSA-167246;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-112382;Reactome: R-HSA-167242;Reactome: R-HSA-167152 "Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of HIV elongation";"RNA Polymerase II Transcription Elongation";"TP53 Regulates Transcription of DNA Repair Genes";"Tat-mediated elongation of the HIV-1 transcript";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Formation of RNA Pol II elongation complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat" CFLO005867-PA 3 Reactome: R-HSA-429947;Reactome: R-HSA-450604;Reactome: R-HSA-380994 "Deadenylation of mRNA";"KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress" CFLO005781-PA 2 Reactome: R-HSA-380270;Reactome: R-HSA-380320 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes" CFLO016279-PA 5 MetaCyc: PWY-7219;Reactome: R-HSA-499943;KEGG: 00230+2.7.4.10;KEGG: 00730+2.7.4.3;KEGG: 00230+2.7.4.3 "Adenosine ribonucleotides de novo biosynthesis";"Interconversion of nucleotide di- and triphosphates";"Purine metabolism";"Thiamine metabolism";"Purine metabolism" CFLO017970-PA 4 MetaCyc: PWY-5041;Reactome: R-HSA-156581;KEGG: 00270+2.5.1.6;MetaCyc: PWY-5912 "S-adenosyl-L-methionine cycle II";"Methylation";"Cysteine and methionine metabolism";"2'-deoxymugineic acid phytosiderophore biosynthesis" CFLO011911-PA 17 Reactome: R-HSA-5696400;Reactome: R-HSA-174437;Reactome: R-HSA-69183;Reactome: R-HSA-69091;Reactome: R-HSA-174417;Reactome: R-HSA-5651801;Reactome: R-HSA-5685942;Reactome: R-HSA-6782135;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-174414;Reactome: R-HSA-5696397;Reactome: R-HSA-5358606;Reactome: R-HSA-5358565;Reactome: R-HSA-69166;Reactome: R-HSA-5656169;Reactome: R-HSA-174411 "Dual Incision in GG-NER";"Removal of the Flap Intermediate from the C-strand";"Processive synthesis on the lagging strand";"Polymerase switching";"Telomere C-strand (Lagging Strand) Synthesis";"PCNA-Dependent Long Patch Base Excision Repair";"HDR through Homologous Recombination (HRR)";"Dual incision in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Processive synthesis on the C-strand of the telomere";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Removal of the Flap Intermediate";"Termination of translesion DNA synthesis";"Polymerase switching on the C-strand of the telomere" CFLO014188-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-8964539 "Transcriptional activation of mitochondrial biogenesis";"Glutamate and glutamine metabolism" CFLO000853-PA 2 Reactome: R-HSA-168276;Reactome: R-HSA-1169408 "NS1 Mediated Effects on Host Pathways";"ISG15 antiviral mechanism" CFLO001578-PA 2 KEGG: 00627+3.6.1.7;KEGG: 00620+3.6.1.7 "Aminobenzoate degradation";"Pyruvate metabolism" CFLO015631-PA 13 Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO008050-PA 4 MetaCyc: PWY-7822;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6855;MetaCyc: PWY-6902 "Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)" CFLO016316-PA 1 Reactome: R-HSA-5693571 "Nonhomologous End-Joining (NHEJ)" CFLO002292-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO004446-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-8876198;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"RAB GEFs exchange GTP for GDP on RABs";"Intra-Golgi traffic" CFLO001229-PA 4 MetaCyc: PWY-3722;Reactome: R-HSA-6798163;MetaCyc: PWY-7494;KEGG: 00260+1.2.1.8+1.1.99.1 "Glycine betaine biosynthesis II (Gram-positive bacteria)";"Choline catabolism";"Choline degradation IV";"Glycine, serine and threonine metabolism" CFLO015980-PA 56 Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-1169091 "Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells" CFLO008224-PA 1 Reactome: R-HSA-5663220 "RHO GTPases Activate Formins" CFLO008479-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO016168-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO002905-PA 26 Reactome: R-HSA-2132295;Reactome: R-HSA-1445148;Reactome: R-HSA-6807878;Reactome: R-HSA-983189;Reactome: R-HSA-6811434;Reactome: R-HSA-190840;Reactome: R-HSA-5617833;Reactome: R-HSA-3371497;Reactome: R-HSA-389960;Reactome: R-HSA-9609690;Reactome: R-HSA-190861;Reactome: R-HSA-9609736;Reactome: R-HSA-6811436;Reactome: R-HSA-5626467;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-8852276;Reactome: R-HSA-380320;Reactome: R-HSA-9646399;Reactome: R-HSA-2467813;Reactome: R-HSA-9619483;Reactome: R-HSA-9648025;Reactome: R-HSA-389977;Reactome: R-HSA-5663220;Reactome: R-HSA-8955332;Reactome: R-HSA-437239 "MHC class II antigen presentation";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"COPI-mediated anterograde transport";"Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic";"Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane";"Cilium Assembly";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Formation of tubulin folding intermediates by CCT/TriC";"HCMV Early Events";"Gap junction assembly";"Assembly and cell surface presentation of NMDA receptors";"COPI-independent Golgi-to-ER retrograde traffic";"RHO GTPases activate IQGAPs";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Recruitment of NuMA to mitotic centrosomes";"Aggrephagy";"Separation of Sister Chromatids";"Activation of AMPK downstream of NMDARs";"EML4 and NUDC in mitotic spindle formation";"Post-chaperonin tubulin folding pathway";"RHO GTPases Activate Formins";"Carboxyterminal post-translational modifications of tubulin";"Recycling pathway of L1" CFLO012217-PA 7 Reactome: R-HSA-9648025;Reactome: R-HSA-606279;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813 "EML4 and NUDC in mitotic spindle formation";"Deposition of new CENPA-containing nucleosomes at the centromere";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"Separation of Sister Chromatids" CFLO002662-PA 5 Reactome: R-HSA-211976;Reactome: R-HSA-1362409;Reactome: R-HSA-5579026;Reactome: R-HSA-2395516;Reactome: R-HSA-196108 "Endogenous sterols";"Mitochondrial iron-sulfur cluster biogenesis";"Defective CYP11A1 causes Adrenal insufficiency, congenital, with 46,XY sex reversal (AICSR)";"Electron transport from NADPH to Ferredoxin";"Pregnenolone biosynthesis" CFLO016893-PA 5 Reactome: R-HSA-8854214;Reactome: R-HSA-5628897;Reactome: R-HSA-1632852;Reactome: R-HSA-380972;Reactome: R-HSA-165181 "TBC/RABGAPs";"TP53 Regulates Metabolic Genes";"Macroautophagy";"Energy dependent regulation of mTOR by LKB1-AMPK";"Inhibition of TSC complex formation by PKB" CFLO013992-PA 27 Reactome: R-HSA-77595;Reactome: R-HSA-112382;Reactome: R-HSA-73856;Reactome: R-HSA-975957;Reactome: R-HSA-191859;Reactome: R-HSA-167242;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-167152;Reactome: R-HSA-72086;Reactome: R-HSA-8851708;Reactome: R-HSA-159236;Reactome: R-HSA-72163;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-159230;Reactome: R-HSA-72187;Reactome: R-HSA-113418;Reactome: R-HSA-6803529;Reactome: R-HSA-159231;Reactome: R-HSA-159227;Reactome: R-HSA-77588;Reactome: R-HSA-111367;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-72165;Reactome: R-HSA-167158 "Processing of Intronless Pre-mRNAs";"Formation of RNA Pol II elongation complex";"RNA Polymerase II Transcription Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"snRNP Assembly";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Formation of HIV elongation complex in the absence of HIV Tat";"mRNA Capping";"Signaling by FGFR2 IIIa TM";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA Splicing - Major Pathway";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Transport of the SLBP Dependant Mature mRNA";"mRNA 3'-end processing";"Formation of the Early Elongation Complex";"FGFR2 alternative splicing";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP independent Mature mRNA";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"SLBP independent Processing of Histone Pre-mRNAs";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Minor Pathway";"Formation of the HIV-1 Early Elongation Complex" CFLO004843-PA 5 MetaCyc: PWY-6987;MetaCyc: PWY-7382;KEGG: 00785+2.3.1.181;Reactome: R-HSA-389661;KEGG: 00785+6.3.1.20 "Lipoate biosynthesis and incorporation III (Bacillus)";"Lipoate biosynthesis and incorporation IV (yeast)";"Lipoic acid metabolism";"Glyoxylate metabolism and glycine degradation";"Lipoic acid metabolism" CFLO005471-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO003107-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" CFLO017737-PA 4 MetaCyc: PWY-6922;KEGG: 00330+1.5.5.2;MetaCyc: PWY-5737;Reactome: R-HSA-70688 "L-Ndelta-acetylornithine biosynthesis";"Arginine and proline metabolism";"(5R)-carbapenem carboxylate biosynthesis";"Proline catabolism" CFLO015238-PA 3 Reactome: R-HSA-2142691;MetaCyc: PWY-7533;Reactome: R-HSA-5423646 "Synthesis of Leukotrienes (LT) and Eoxins (EX)";"Gliotoxin biosynthesis";"Aflatoxin activation and detoxification" CFLO002773-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO009824-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO007528-PA 1 Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO006114-PA 6 KEGG: 00561+2.7.1.107;MetaCyc: PWY-7817;KEGG: 00564+2.7.1.107;Reactome: R-HSA-114508;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039 "Glycerolipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism";"Effects of PIP2 hydrolysis";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule" CFLO009854-PA 5 Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO016400-PA 4 Reactome: R-HSA-2243919;Reactome: R-HSA-1474228;Reactome: R-HSA-2214320;Reactome: R-HSA-1650814 "Crosslinking of collagen fibrils";"Degradation of the extracellular matrix";"Anchoring fibril formation";"Collagen biosynthesis and modifying enzymes" CFLO000099-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO000640-PA 2 Reactome: R-HSA-5357956;Reactome: R-HSA-5357905 "TNFR1-induced NFkappaB signaling pathway";"Regulation of TNFR1 signaling" CFLO004733-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO001027-PA 3 Reactome: R-HSA-416482;Reactome: R-HSA-193648;Reactome: R-HSA-194840 "G alpha (12/13) signalling events";"NRAGE signals death through JNK";"Rho GTPase cycle" CFLO002304-PA 57 Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-6798695;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-180534 "Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Neutrophil degranulation";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Vpu mediated degradation of CD4" CFLO007327-PA 3 Reactome: R-HSA-8868766;Reactome: R-HSA-6787450;Reactome: R-HSA-6785470 "rRNA processing in the mitochondrion";"tRNA modification in the mitochondrion";"tRNA processing in the mitochondrion" CFLO012106-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" CFLO006969-PA 8 Reactome: R-HSA-6791462;KEGG: 00030+2.2.1.2;Reactome: R-HSA-8950505;Reactome: R-HSA-6791055;MetaCyc: PWY-5723;MetaCyc: PWY-1861;Reactome: R-HSA-71336;Reactome: R-HSA-163754 "TALDO1 deficiency: failed conversion of Fru(6)P, E4P to SH7P, GA3P";"Pentose phosphate pathway";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"TALDO1 deficiency: failed conversion of SH7P, GA3P to Fru(6)P, E4P";"Rubisco shunt";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Pentose phosphate pathway";"Insulin effects increased synthesis of Xylulose-5-Phosphate" CFLO000921-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO012387-PA 10 KEGG: 00604+3.2.1.23;Reactome: R-HSA-2206292;KEGG: 00511+3.2.1.23;Reactome: R-HSA-2024096;KEGG: 00052+3.2.1.23;MetaCyc: PWY-6807;Reactome: R-HSA-2160916;KEGG: 00531+3.2.1.23;KEGG: 00600+3.2.1.23;Reactome: R-HSA-6798695 "Glycosphingolipid biosynthesis - ganglio series";"MPS VII - Sly syndrome";"Other glycan degradation";"HS-GAG degradation";"Galactose metabolism";"Xyloglucan degradation II (exoglucanase)";"Hyaluronan uptake and degradation";"Glycosaminoglycan degradation";"Sphingolipid metabolism";"Neutrophil degranulation" CFLO017030-PA 3 MetaCyc: PWY-7980;KEGG: 00190+7.1.2.2;KEGG: 00195+7.1.2.2 "ATP biosynthesis";"Oxidative phosphorylation";"Photosynthesis" CFLO011969-PA 1 Reactome: R-HSA-211981 "Xenobiotics" CFLO012105-PA 1 Reactome: R-HSA-5617472 "Activation of anterior HOX genes in hindbrain development during early embryogenesis" CFLO004010-PA 2 Reactome: R-HSA-6785470;Reactome: R-HSA-6784531 "tRNA processing in the mitochondrion";"tRNA processing in the nucleus" CFLO005734-PA 2 Reactome: R-HSA-8853659;Reactome: R-HSA-5673001 "RET signaling";"RAF/MAP kinase cascade" CFLO000828-PA 2 Reactome: R-HSA-72706;Reactome: R-HSA-72702 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition" CFLO006608-PA 4 KEGG: 00983+6.3.5.2;MetaCyc: PWY-7221;Reactome: R-HSA-73817;KEGG: 00230+6.3.5.2 "Drug metabolism - other enzymes";"Guanosine ribonucleotides de novo biosynthesis";"Purine ribonucleoside monophosphate biosynthesis";"Purine metabolism" CFLO002818-PA 56 Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-180534;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258 "Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Vpu mediated degradation of CD4";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Neddylation";"Asymmetric localization of PCP proteins";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL" CFLO011291-PA 10 KEGG: 00562+2.7.1.153;MetaCyc: PWY-6352;KEGG: 04070+2.7.1.153;KEGG: 05170+2.7.1.153;Reactome: R-HSA-1660499;Reactome: R-HSA-9027276;KEGG: 05163+2.7.1.153;KEGG: 04150+2.7.1.153;KEGG: 04151+2.7.1.153;KEGG: 05165+2.7.1.153 "Inositol phosphate metabolism";"3-phosphoinositide biosynthesis";"Phosphatidylinositol signaling system";"Human immunodeficiency virus 1 infection";"Synthesis of PIPs at the plasma membrane";"Erythropoietin activates Phosphoinositide-3-kinase (PI3K)";"Human cytomegalovirus infection";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Human papillomavirus infection" CFLO005154-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" CFLO001745-PA 4 Reactome: R-HSA-6811434;Reactome: R-HSA-983189;Reactome: R-HSA-2132295;Reactome: R-HSA-68884 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins";"MHC class II antigen presentation";"Mitotic Telophase/Cytokinesis" CFLO006125-PA 3 KEGG: 00790+3.1.3.1;KEGG: 00730+3.1.3.1;MetaCyc: PWY-5491 "Folate biosynthesis";"Thiamine metabolism";"Diethylphosphate degradation" CFLO005353-PA 18 Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-75955;Reactome: R-HSA-167158;Reactome: R-HSA-167238;Reactome: R-HSA-6807505;Reactome: R-HSA-167152;Reactome: R-HSA-167242;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-167200;Reactome: R-HSA-674695;Reactome: R-HSA-167290;Reactome: R-HSA-167160;Reactome: R-HSA-77075;Reactome: R-HSA-72086 "HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"RNA Polymerase II Transcription Elongation";"Formation of the HIV-1 Early Elongation Complex";"Pausing and recovery of Tat-mediated HIV elongation";"RNA polymerase II transcribes snRNA genes";"Formation of HIV elongation complex in the absence of HIV Tat";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of HIV elongation";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping" CFLO005908-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO009794-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO002328-PA 3 KEGG: 04658+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16 "Th1 and Th2 cell differentiation";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer" CFLO000932-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO003728-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO002749-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6784531 "Major pathway of rRNA processing in the nucleolus and cytosol";"tRNA processing in the nucleus" CFLO005586-PA 4 Reactome: R-HSA-5693579;Reactome: R-HSA-5693568;Reactome: R-HSA-5685942;Reactome: R-HSA-5693554 "Homologous DNA Pairing and Strand Exchange";"Resolution of D-loop Structures through Holliday Junction Intermediates";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)" CFLO002603-PA 5 KEGG: 00514+2.4.1.109;MetaCyc: PWY-7979;MetaCyc: PWY-7922;MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109 "Other types of O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis" CFLO000702-PA 2 Reactome: R-HSA-381340;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression" CFLO017533-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO013404-PA 1 Reactome: R-HSA-9640463 "Wax biosynthesis" CFLO010622-PA 4 MetaCyc: PWY-7849;MetaCyc: PWY-7394;KEGG: 00230+4.1.1.97;MetaCyc: PWY-5691 "Urate conversion to allantoin III";"Urate conversion to allantoin II";"Purine metabolism";"Urate conversion to allantoin I" CFLO013980-PA 7 Reactome: R-HSA-69202;Reactome: R-HSA-69656;Reactome: R-HSA-69205;Reactome: R-HSA-1362277;Reactome: R-HSA-1538133;Reactome: R-HSA-1362300;Reactome: R-HSA-156711 "Cyclin E associated events during G1/S transition";"Cyclin A:Cdk2-associated events at S phase entry";"G1/S-Specific Transcription";"Transcription of E2F targets under negative control by DREAM complex";"G0 and Early G1";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Polo-like kinase mediated events" CFLO002097-PA 3 Reactome: R-HSA-76066;Reactome: R-HSA-749476;Reactome: R-HSA-76061 "RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter" CFLO015574-PA 17 MetaCyc: PWY-7176;MetaCyc: PWY-6545;MetaCyc: PWY-7197;KEGG: 00230+2.7.4.6;KEGG: 00240+2.7.4.6;MetaCyc: PWY-7210;MetaCyc: PWY-7198;MetaCyc: PWY-7187;MetaCyc: PWY-7222;MetaCyc: PWY-7226;MetaCyc: PWY-7220;KEGG: 00983+2.7.4.6;MetaCyc: PWY-7224;MetaCyc: PWY-7184;MetaCyc: PWY-7227;MetaCyc: PWY-7221;MetaCyc: PWY-7205 "UTP and CTP de novo biosynthesis";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotide phosphorylation";"Purine metabolism";"Pyrimidine metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes";"Purine deoxyribonucleosides salvage";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine ribonucleotides de novo biosynthesis";"CMP phosphorylation" CFLO010604-PA 6 Reactome: R-HSA-69052;Reactome: R-HSA-176974;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68949;Reactome: R-HSA-68867 "Switching of origins to a post-replicative state";"Unwinding of DNA";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Orc1 removal from chromatin";"Assembly of the pre-replicative complex" CFLO007106-PA 22 MetaCyc: PWY-7726;MetaCyc: PWY-6958;MetaCyc: PWY-7053;Reactome: R-HSA-75876;MetaCyc: PWY-7592;MetaCyc: PWY-7035;KEGG: 00062+4.2.1.134;MetaCyc: PWY-7728;MetaCyc: PWY-7036;MetaCyc: PWY-7619;MetaCyc: PWY-6598;MetaCyc: PWY-7727;MetaCyc: PWY-5353;MetaCyc: PWY-7606;MetaCyc: PWY-6433;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7049;MetaCyc: PWY-5080;MetaCyc: PWY-7724;MetaCyc: PWY-7601;MetaCyc: PWY-7602 "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Icosapentaenoate biosynthesis I (lower eukaryotes)";"Docosahexaenoate biosynthesis I (lower eukaryotes)";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis III (6-desaturase, mammals)";"(9Z)-tricosene biosynthesis";"Fatty acid elongation";"(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase)";"Very long chain fatty acid biosynthesis II";"Juniperonate biosynthesis";"Sciadonate biosynthesis";"Docosahexaenoate biosynthesis IV (4-desaturase, mammals)";"Arachidonate biosynthesis I (6-desaturase, lower eukaryotes)";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Hydroxylated fatty acid biosynthesis (plants)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Icosapentaenoate biosynthesis II (6-desaturase, mammals)";"Very long chain fatty acid biosynthesis I";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)" CFLO012133-PA 5 Reactome: R-HSA-917729;Reactome: R-HSA-9615710;Reactome: R-HSA-162588;Reactome: R-HSA-9610379;Reactome: R-HSA-174490 "Endosomal Sorting Complex Required For Transport (ESCRT)";"Late endosomal microautophagy";"Budding and maturation of HIV virion";"HCMV Late Events";"Membrane binding and targetting of GAG proteins" CFLO014696-PA 2 Reactome: R-HSA-72165;Reactome: R-HSA-72163 "mRNA Splicing - Minor Pathway";"mRNA Splicing - Major Pathway" CFLO013107-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO000135-PA 2 KEGG: 00970+2.1.2.9;KEGG: 00670+2.1.2.9 "Aminoacyl-tRNA biosynthesis";"One carbon pool by folate" CFLO013600-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-6804758 "HATs acetylate histones";"Regulation of TP53 Activity through Acetylation" CFLO014842-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO006869-PA 11 Reactome: R-HSA-75955;Reactome: R-HSA-167200;Reactome: R-HSA-167290;Reactome: R-HSA-167238;Reactome: R-HSA-674695;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-6796648;Reactome: R-HSA-167152 "RNA Polymerase II Transcription Elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Pausing and recovery of HIV elongation";"Pausing and recovery of Tat-mediated HIV elongation";"RNA Polymerase II Pre-transcription Events";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of HIV elongation complex in the absence of HIV Tat" CFLO016031-PA 2 Reactome: R-HSA-8963888;Reactome: R-HSA-8866423 "Chylomicron assembly";"VLDL assembly" CFLO018046-PA 5 Reactome: R-HSA-111447;Reactome: R-HSA-1445148;Reactome: R-HSA-5625740;Reactome: R-HSA-75035;Reactome: R-HSA-5628897 "Activation of BAD and translocation to mitochondria";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"RHO GTPases activate PKNs";"Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex";"TP53 Regulates Metabolic Genes" CFLO017731-PA 6 Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-9648025 "RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation" CFLO005902-PA 7 KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1 "Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway";"Human papillomavirus infection";"Thermogenesis" CFLO018170-PA 1 Reactome: R-HSA-5578775 "Ion homeostasis" CFLO008919-PA 3 Reactome: R-HSA-4420097;Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "VEGFA-VEGFR2 Pathway";"RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" CFLO002951-PA 3 Reactome: R-HSA-9609736;Reactome: R-HSA-212676;Reactome: R-HSA-6794361 "Assembly and cell surface presentation of NMDA receptors";"Dopamine Neurotransmitter Release Cycle";"Neurexins and neuroligins" CFLO013862-PA 4 Reactome: R-HSA-400511;Reactome: R-HSA-422085;Reactome: R-HSA-1799339;Reactome: R-HSA-381771 "Synthesis, secretion, and inactivation of Glucose-dependent Insulinotropic Polypeptide (GIP)";"Synthesis, secretion, and deacylation of Ghrelin";"SRP-dependent cotranslational protein targeting to membrane";"Synthesis, secretion, and inactivation of Glucagon-like Peptide-1 (GLP-1)" CFLO011294-PA 2 Reactome: R-HSA-6783984;Reactome: R-HSA-389661 "Glycine degradation";"Glyoxylate metabolism and glycine degradation" CFLO002683-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO002135-PA 8 Reactome: R-HSA-9639288;Reactome: R-HSA-983712;Reactome: R-HSA-1222556;Reactome: R-HSA-167590;Reactome: R-HSA-917977;Reactome: R-HSA-182218;Reactome: R-HSA-77387;Reactome: R-HSA-9636467 "Amino acids regulate mTORC1";"Ion channel transport";"ROS and RNS production in phagocytes";"Nef Mediated CD4 Down-regulation";"Transferrin endocytosis and recycling";"Nef Mediated CD8 Down-regulation";"Insulin receptor recycling";"Blockage of phagosome acidification" CFLO014185-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO010922-PA 3 KEGG: 00511+3.2.1.51;MetaCyc: PWY-6807;Reactome: R-HSA-6798695 "Other glycan degradation";"Xyloglucan degradation II (exoglucanase)";"Neutrophil degranulation" CFLO004025-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO004916-PA 5 MetaCyc: PWY-6902;MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14;Reactome: R-HSA-189085;MetaCyc: PWY-7822 "Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism";"Digestion of dietary carbohydrate";"Chitin degradation III (Serratia)" CFLO002743-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO000660-PA 5 Reactome: R-HSA-2206305;Reactome: R-HSA-432720;Reactome: R-HSA-2022857;KEGG: 00531+3.1.6.14;Reactome: R-HSA-6798695 "MPS IIID - Sanfilippo syndrome D";"Lysosome Vesicle Biogenesis";"Keratan sulfate degradation";"Glycosaminoglycan degradation";"Neutrophil degranulation" CFLO003172-PA 7 Reactome: R-HSA-2500257;Reactome: R-HSA-4615885;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Resolution of Sister Chromatid Cohesion";"SUMOylation of DNA replication proteins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" CFLO018413-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO013923-PA 1 Reactome: R-HSA-5656169 "Termination of translesion DNA synthesis" CFLO004461-PA 7 MetaCyc: PWY-6122;KEGG: 00230+2.4.2.14;KEGG: 00250+2.4.2.14;MetaCyc: PWY-7282;MetaCyc: PWY-6121;MetaCyc: PWY-6277;Reactome: R-HSA-73817 "5-aminoimidazole ribonucleotide biosynthesis II";"Purine metabolism";"Alanine, aspartate and glutamate metabolism";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis I";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"Purine ribonucleoside monophosphate biosynthesis" CFLO016675-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO004027-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO016175-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-5620916;Reactome: R-HSA-264876 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"VxPx cargo-targeting to cilium";"Insulin processing" CFLO003030-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO009888-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO000638-PA 5 Reactome: R-HSA-499943;MetaCyc: PWY-7185;MetaCyc: PWY-7177;KEGG: 00240+6.3.4.2;MetaCyc: PWY-7176 "Interconversion of nucleotide di- and triphosphates";"UTP and CTP dephosphorylation I";"UTP and CTP dephosphorylation II";"Pyrimidine metabolism";"UTP and CTP de novo biosynthesis" CFLO012226-PA 7 Reactome: R-HSA-110362;Reactome: R-HSA-5696394;Reactome: R-HSA-5696395;Reactome: R-HSA-5696400;Reactome: R-HSA-3108214;Reactome: R-HSA-2173795;Reactome: R-HSA-5685939 "POLB-Dependent Long Patch Base Excision Repair";"DNA Damage Recognition in GG-NER";"Formation of Incision Complex in GG-NER";"Dual Incision in GG-NER";"SUMOylation of DNA damage response and repair proteins";"Downregulation of SMAD2/3:SMAD4 transcriptional activity";"HDR through MMEJ (alt-NHEJ)" CFLO014442-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" CFLO013292-PA 3 Reactome: R-HSA-2559580;Reactome: R-HSA-8943724;Reactome: R-HSA-8939243 "Oxidative Stress Induced Senescence";"Regulation of PTEN gene transcription";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO009130-PA 2 KEGG: 04660+2.7.10.2;Reactome: R-HSA-428890 "T cell receptor signaling pathway";"Role of ABL in ROBO-SLIT signaling" CFLO007415-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO016462-PA 6 Reactome: R-HSA-114508;KEGG: 00564+2.7.1.107;MetaCyc: PWY-7817;KEGG: 00561+2.7.1.107;MetaCyc: PWY-7039;KEGG: 04070+2.7.1.107 "Effects of PIP2 hydrolysis";"Glycerophospholipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerolipid metabolism";"Phosphatidate metabolism, as a signaling molecule";"Phosphatidylinositol signaling system" CFLO000348-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO005122-PA 2 Reactome: R-HSA-163282;Reactome: R-HSA-2151201 "Mitochondrial transcription initiation";"Transcriptional activation of mitochondrial biogenesis" CFLO000170-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO011361-PA 1 Reactome: R-HSA-3295583 "TRP channels" CFLO009190-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO010235-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" CFLO009172-PA 2 KEGG: 00770+2.7.1.24;MetaCyc: PWY-7851 "Pantothenate and CoA biosynthesis";"Coenzyme A biosynthesis II (eukaryotic)" CFLO012596-PA 16 Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823 "Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Peptide chain elongation";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation" CFLO001248-PA 3 MetaCyc: PWY-7803;Reactome: R-HSA-6784531;MetaCyc: PWY-6689 "Trna splicing II";"tRNA processing in the nucleus";"Trna splicing I" CFLO002695-PA 2 Reactome: R-HSA-418555;Reactome: R-HSA-444821 "G alpha (s) signalling events";"Relaxin receptors" CFLO004180-PA 2 Reactome: R-HSA-8949613;Reactome: R-HSA-163210 "Cristae formation";"Formation of ATP by chemiosmotic coupling" CFLO004662-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO015205-PA 1 Reactome: R-HSA-2565942 "Regulation of PLK1 Activity at G2/M Transition" CFLO004335-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO003291-PA 1 Reactome: R-HSA-1483191 "Synthesis of PC" CFLO006297-PA 3 Reactome: R-HSA-6811434;Reactome: R-HSA-6798695;Reactome: R-HSA-6807878 "COPI-dependent Golgi-to-ER retrograde traffic";"Neutrophil degranulation";"COPI-mediated anterograde transport" CFLO016888-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO012670-PA 2 Reactome: R-HSA-73980;Reactome: R-HSA-749476 "RNA Polymerase III Transcription Termination";"RNA Polymerase III Abortive And Retractive Initiation" CFLO016910-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO018002-PA 3 KEGG: 00970+6.1.1.19;Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" CFLO019110-PA 1 Reactome: R-HSA-389977 "Post-chaperonin tubulin folding pathway" CFLO010692-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO001781-PA 5 MetaCyc: PWY-7822;KEGG: 00520+3.2.1.14;MetaCyc: PWY-6855;MetaCyc: PWY-6902;Reactome: R-HSA-189085 "Chitin degradation III (Serratia)";"Amino sugar and nucleotide sugar metabolism";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Digestion of dietary carbohydrate" CFLO013550-PA 27 Reactome: R-HSA-159231;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-168333;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-159236;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-168325;Reactome: R-HSA-6784531;Reactome: R-HSA-3301854;Reactome: R-HSA-165054;Reactome: R-HSA-180746;Reactome: R-HSA-3108214 "Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Viral Messenger RNA Synthesis";"tRNA processing in the nucleus";"Nuclear Pore Complex (NPC) Disassembly";"Rev-mediated nuclear export of HIV RNA";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins" CFLO000626-PA 1 Reactome: R-HSA-373080 "Class B/2 (Secretin family receptors)" CFLO001808-PA 4 Reactome: R-HSA-5661270;KEGG: 00561+2.7.1.30;MetaCyc: PWY-4261;KEGG: 00040+2.7.1.17 "Formation of xylulose-5-phosphate";"Glycerolipid metabolism";"Glycerol degradation I";"Pentose and glucuronate interconversions" CFLO018068-PA 1 Reactome: R-HSA-435368 "Zinc efflux and compartmentalization by the SLC30 family" CFLO001598-PA 2 Reactome: R-HSA-5693568;Reactome: R-HSA-6783310 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Fanconi Anemia Pathway" CFLO002663-PA 2 Reactome: R-HSA-6802953;Reactome: R-HSA-5658442 "RAS signaling downstream of NF1 loss-of-function variants";"Regulation of RAS by GAPs" CFLO002880-PA 8 Reactome: R-HSA-4615885;Reactome: R-HSA-5663220;Reactome: R-HSA-68877;Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-165054;Reactome: R-HSA-9648025 "SUMOylation of DNA replication proteins";"RHO GTPases Activate Formins";"Mitotic Prometaphase";"Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Rev-mediated nuclear export of HIV RNA";"EML4 and NUDC in mitotic spindle formation" CFLO009375-PA 3 Reactome: R-HSA-674695;Reactome: R-HSA-75955;Reactome: R-HSA-112382 "RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex" CFLO018808-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO017229-PA 3 Reactome: R-HSA-416476;Reactome: R-HSA-375276;Reactome: R-HSA-418594 "G alpha (q) signalling events";"Peptide ligand-binding receptors";"G alpha (i) signalling events" CFLO002076-PA 1 Reactome: R-HSA-500753 "Pyrimidine biosynthesis" CFLO009875-PA 2 Reactome: R-HSA-5685938;Reactome: R-HSA-3108214 "HDR through Single Strand Annealing (SSA)";"SUMOylation of DNA damage response and repair proteins" CFLO006498-PA 10 Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-167172;Reactome: R-HSA-73776;Reactome: R-HSA-674695;Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-6807505;Reactome: R-HSA-9018519;Reactome: R-HSA-73779 "RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"Transcription of the HIV genome";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA polymerase II transcribes snRNA genes";"Estrogen-dependent gene expression";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO010733-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" CFLO000484-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-1268020 "Citric acid cycle (TCA cycle)";"Mitochondrial protein import" CFLO015261-PA 3 Reactome: R-HSA-8854214;Reactome: R-HSA-8856828;Reactome: R-HSA-8875656 "TBC/RABGAPs";"Clathrin-mediated endocytosis";"MET receptor recycling" CFLO000684-PA 13 MetaCyc: PWY-7220;MetaCyc: PWY-6545;MetaCyc: PWY-7226;KEGG: 00240+1.17.4.1;KEGG: 00480+1.17.4.1;KEGG: 00230+1.17.4.1;MetaCyc: PWY-7184;MetaCyc: PWY-7210;Reactome: R-HSA-499943;MetaCyc: PWY-7198;MetaCyc: PWY-7227;MetaCyc: PWY-7222;KEGG: 00983+1.17.4.1 "Adenosine deoxyribonucleotides de novo biosynthesis II";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine metabolism";"Glutathione metabolism";"Purine metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes" CFLO001957-PA 5 MetaCyc: PWY-7822;MetaCyc: PWY-6855;MetaCyc: PWY-6902;KEGG: 00520+3.2.1.14;Reactome: R-HSA-189085 "Chitin degradation III (Serratia)";"Chitin degradation I (archaea)";"Chitin degradation II (Vibrio)";"Amino sugar and nucleotide sugar metabolism";"Digestion of dietary carbohydrate" CFLO009017-PA 4 Reactome: R-HSA-8875555;Reactome: R-HSA-8875656;Reactome: R-HSA-186763;Reactome: R-HSA-912631 "MET activates RAP1 and RAC1";"MET receptor recycling";"Downstream signal transduction";"Regulation of signaling by CBL" CFLO008828-PA 29 Reactome: R-HSA-6782135;Reactome: R-HSA-176187;Reactome: R-HSA-5685938;Reactome: R-HSA-5685942;Reactome: R-HSA-5651801;Reactome: R-HSA-5656121;Reactome: R-HSA-3371453;Reactome: R-HSA-110312;Reactome: R-HSA-5693616;Reactome: R-HSA-3108214;Reactome: R-HSA-5696400;Reactome: R-HSA-174437;Reactome: R-HSA-69473;Reactome: R-HSA-6783310;Reactome: R-HSA-5358565;Reactome: R-HSA-69166;Reactome: R-HSA-68962;Reactome: R-HSA-5656169;Reactome: R-HSA-5358606;Reactome: R-HSA-5696397;Reactome: R-HSA-5696395;Reactome: R-HSA-6782210;Reactome: R-HSA-110314;Reactome: R-HSA-110320;Reactome: R-HSA-3371511;Reactome: R-HSA-5693607;Reactome: R-HSA-6804756;Reactome: R-HSA-5655862;Reactome: R-HSA-912446 "Dual incision in TC-NER";"Activation of ATR in response to replication stress";"HDR through Single Strand Annealing (SSA)";"HDR through Homologous Recombination (HRR)";"PCNA-Dependent Long Patch Base Excision Repair";"Translesion synthesis by POLI";"Regulation of HSF1-mediated heat shock response";"Translesion synthesis by REV1";"Presynaptic phase of homologous DNA pairing and strand exchange";"SUMOylation of DNA damage response and repair proteins";"Dual Incision in GG-NER";"Removal of the Flap Intermediate from the C-strand";"G2/M DNA damage checkpoint";"Fanconi Anemia Pathway";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Removal of the Flap Intermediate";"Activation of the pre-replicative complex";"Termination of translesion DNA synthesis";"Mismatch repair (MMR) directed by MSH2:MSH3 (MutSbeta)";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Formation of Incision Complex in GG-NER";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Translesion Synthesis by POLH";"HSF1 activation";"Processing of DNA double-strand break ends";"Regulation of TP53 Activity through Phosphorylation";"Translesion synthesis by POLK";"Meiotic recombination" CFLO016939-PA 4 Reactome: R-HSA-186763;Reactome: R-HSA-373753;Reactome: R-HSA-428540;Reactome: R-HSA-4420097 "Downstream signal transduction";"Nephrin family interactions";"Activation of RAC1";"VEGFA-VEGFR2 Pathway" CFLO012772-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO019654-PA 5 Reactome: R-HSA-75105;Reactome: R-HSA-163765;Reactome: R-HSA-9029558;Reactome: R-HSA-2426168;Reactome: R-HSA-199220 "Fatty acyl-CoA biosynthesis";"ChREBP activates metabolic gene expression";"NR1H2 & NR1H3 regulate gene expression linked to lipogenesis";"Activation of gene expression by SREBF (SREBP)";"Vitamin B5 (pantothenate) metabolism" CFLO012836-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO000984-PA 1 Reactome: R-HSA-426486 "Small interfering RNA (siRNA) biogenesis" CFLO011599-PA 3 Reactome: R-HSA-264876;Reactome: R-HSA-5620916;Reactome: R-HSA-1445148 "Insulin processing";"VxPx cargo-targeting to cilium";"Translocation of SLC2A4 (GLUT4) to the plasma membrane" CFLO001719-PA 6 KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;KEGG: 00561+2.7.1.107;MetaCyc: PWY-7817;KEGG: 00564+2.7.1.107;Reactome: R-HSA-114508 "Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Glycerolipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism";"Effects of PIP2 hydrolysis" CFLO015008-PA 6 Reactome: R-HSA-2500257;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Resolution of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" CFLO006858-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO009114-PA 1 Reactome: R-HSA-419771 "Opsins" CFLO016280-PA 2 MetaCyc: PWY-6281;KEGG: 00450+2.7.9.3 "L-selenocysteine biosynthesis II (archaea and eukaryotes)";"Selenocompound metabolism" CFLO012160-PA 6 Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72706 "Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO004380-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO009007-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO004117-PA 2 Reactome: R-HSA-6807878;Reactome: R-HSA-6811434 "COPI-mediated anterograde transport";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO002173-PA 3 Reactome: R-HSA-3000157;Reactome: R-HSA-3000171;Reactome: R-HSA-8874081 "Laminin interactions";"Non-integrin membrane-ECM interactions";"MET activates PTK2 signaling" CFLO010702-PA 8 KEGG: 05170+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-2028269;KEGG: 05163+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04151+2.7.11.1 "Human immunodeficiency virus 1 infection";"Thermogenesis";"Relaxin signaling pathway";"mTOR signaling pathway";"Signaling by Hippo";"Human cytomegalovirus infection";"Human papillomavirus infection";"PI3K-Akt signaling pathway" CFLO006116-PA 6 Reactome: R-HSA-114508;KEGG: 00561+2.7.1.107;MetaCyc: PWY-7817;KEGG: 00564+2.7.1.107;KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039 "Effects of PIP2 hydrolysis";"Glycerolipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism";"Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule" CFLO005147-PA 7 KEGG: 00230+2.7.4.3;MetaCyc: PWY-7176;KEGG: 00983+2.7.4.14;KEGG: 00730+2.7.4.3;Reactome: R-HSA-499943;MetaCyc: PWY-7219;KEGG: 00240+2.7.4.14 "Purine metabolism";"UTP and CTP de novo biosynthesis";"Drug metabolism - other enzymes";"Thiamine metabolism";"Interconversion of nucleotide di- and triphosphates";"Adenosine ribonucleotides de novo biosynthesis";"Pyrimidine metabolism" CFLO001831-PA 2 Reactome: R-HSA-189451;KEGG: 00860+4.99.1.1 "Heme biosynthesis";"Porphyrin and chlorophyll metabolism" CFLO019576-PA 5 Reactome: R-HSA-196807;MetaCyc: PWY-7268;MetaCyc: PWY-5083;MetaCyc: PWY-7269;KEGG: 00760+2.7.1.23 "Nicotinate metabolism";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"NAD/NADH phosphorylation and dephosphorylation";"NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)";"Nicotinate and nicotinamide metabolism" CFLO008775-PA 14 Reactome: R-HSA-9609690;Reactome: R-HSA-6811436;Reactome: R-HSA-5620924;Reactome: R-HSA-68877;Reactome: R-HSA-3371497;Reactome: R-HSA-5663220;Reactome: R-HSA-1632852;Reactome: R-HSA-9648025;Reactome: R-HSA-2500257;Reactome: R-HSA-2132295;Reactome: R-HSA-9646399;Reactome: R-HSA-6807878;Reactome: R-HSA-2467813;Reactome: R-HSA-141444 "HCMV Early Events";"COPI-independent Golgi-to-ER retrograde traffic";"Intraflagellar transport";"Mitotic Prometaphase";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"RHO GTPases Activate Formins";"Macroautophagy";"EML4 and NUDC in mitotic spindle formation";"Resolution of Sister Chromatid Cohesion";"MHC class II antigen presentation";"Aggrephagy";"COPI-mediated anterograde transport";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal" CFLO006251-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO007976-PA 1 KEGG: 00900+3.4.24.84 "Terpenoid backbone biosynthesis" CFLO018551-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO006875-PA 4 Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-983712 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Ion channel transport" CFLO002987-PA 8 Reactome: R-HSA-68962;Reactome: R-HSA-174411;Reactome: R-HSA-69166;Reactome: R-HSA-174430;Reactome: R-HSA-113501;Reactome: R-HSA-69091;Reactome: R-HSA-69183;Reactome: R-HSA-68952 "Activation of the pre-replicative complex";"Polymerase switching on the C-strand of the telomere";"Removal of the Flap Intermediate";"Telomere C-strand synthesis initiation";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Polymerase switching";"Processive synthesis on the lagging strand";"DNA replication initiation" CFLO001545-PA 12 MetaCyc: PWY-5856;MetaCyc: PWY-6708;KEGG: 00130+1.14.99.60;MetaCyc: PWY-5870;MetaCyc: PWY-5857;MetaCyc: PWY-5871;MetaCyc: PWY-5855;MetaCyc: PWY-7230;Reactome: R-HSA-2142789;MetaCyc: PWY-7233;MetaCyc: PWY-5872;MetaCyc: PWY-5873 "Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-8 biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (prokaryotic)";"Ubiquinol-9 biosynthesis (eukaryotic)";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)";"Ubiquinol biosynthesis";"Ubiquinol-6 bypass biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol-7 biosynthesis (eukaryotic)" CFLO002329-PA 13 Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339 "Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane" CFLO002739-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation" CFLO014258-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO002036-PA 42 Reactome: R-HSA-3214847;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214858;Reactome: R-HSA-1912408;Reactome: R-HSA-5578749;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-9610379;Reactome: R-HSA-201722;Reactome: R-HSA-3214841;Reactome: R-HSA-212300;Reactome: R-HSA-3214815;Reactome: R-HSA-5693607;Reactome: R-HSA-5693565;Reactome: R-HSA-110330;Reactome: R-HSA-3214842;Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-606279;Reactome: R-HSA-73728;Reactome: R-HSA-8936459;Reactome: R-HSA-5334118;Reactome: R-HSA-427359;Reactome: R-HSA-69473;Reactome: R-HSA-2559580;Reactome: R-HSA-110328;Reactome: R-HSA-5625886;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-73772;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-9616222;Reactome: R-HSA-2559586;Reactome: R-HSA-9018519;Reactome: R-HSA-171306;Reactome: R-HSA-9609690 "HATs acetylate histones";"Amyloid fiber formation";"Cleavage of the damaged purine";"RMTs methylate histone arginines";"Pre-NOTCH Transcription and Translation";"Transcriptional regulation by small RNAs";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HCMV Late Events";"Formation of the beta-catenin:TCF transactivating complex";"PKMTs methylate histone lysines";"PRC2 methylates histones and DNA";"HDACs deacetylate histones";"Processing of DNA double-strand break ends";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Recognition and association of DNA glycosylase with site containing an affected purine";"HDMs demethylate histones";"SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Deposition of new CENPA-containing nucleosomes at the centromere";"RNA Polymerase I Promoter Opening";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"DNA methylation";"SIRT1 negatively regulates rRNA expression";"G2/M DNA damage checkpoint";"Oxidative Stress Induced Senescence";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"RNA Polymerase I Promoter Escape";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Transcriptional regulation of granulopoiesis";"DNA Damage/Telomere Stress Induced Senescence";"Estrogen-dependent gene expression";"Packaging Of Telomere Ends";"HCMV Early Events" CFLO017989-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO001236-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO015868-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" CFLO000526-PA 1 Reactome: R-HSA-6804760 "Regulation of TP53 Activity through Methylation" CFLO004557-PA 1 Reactome: R-HSA-5601884 "PIWI-interacting RNA (piRNA) biogenesis" CFLO000142-PA 5 Reactome: R-HSA-2894862;Reactome: R-HSA-350054;Reactome: R-HSA-2644606;Reactome: R-HSA-2122947;Reactome: R-HSA-3214815 "Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Notch-HLH transcription pathway";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH1 Intracellular Domain Regulates Transcription";"HDACs deacetylate histones" CFLO012765-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" CFLO000631-PA 56 Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-180534;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-69601;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5668541;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-5610783;Reactome: R-HSA-8951664;Reactome: R-HSA-4608870 "Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Vpu mediated degradation of CD4";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"TNFR2 non-canonical NF-kB pathway";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Neddylation";"Asymmetric localization of PCP proteins" CFLO014500-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO009258-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" CFLO001080-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" CFLO015109-PA 1 MetaCyc: PWY-6938 "NADH repair" CFLO002913-PA 1 Reactome: R-HSA-211945 "Phase I - Functionalization of compounds" CFLO015259-PA 1 Reactome: R-HSA-2467813 "Separation of Sister Chromatids" CFLO010998-PA 11 Reactome: R-HSA-6807878;Reactome: R-HSA-380320;Reactome: R-HSA-2132295;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-380270;Reactome: R-HSA-6811436;Reactome: R-HSA-380259;Reactome: R-HSA-380284;Reactome: R-HSA-3371497;Reactome: R-HSA-8854518 "COPI-mediated anterograde transport";"Recruitment of NuMA to mitotic centrosomes";"MHC class II antigen presentation";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"Recruitment of mitotic centrosome proteins and complexes";"COPI-independent Golgi-to-ER retrograde traffic";"Loss of Nlp from mitotic centrosomes";"Loss of proteins required for interphase microtubule organization from the centrosome";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"AURKA Activation by TPX2" CFLO007015-PA 16 Reactome: R-HSA-174154;Reactome: R-HSA-983168;Reactome: R-HSA-179409;Reactome: R-HSA-176407;Reactome: R-HSA-176412;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-8853884;Reactome: R-HSA-174178;Reactome: R-HSA-141430;Reactome: R-HSA-176408;Reactome: R-HSA-69017;Reactome: R-HSA-2559582;Reactome: R-HSA-174184;Reactome: R-HSA-174048;Reactome: R-HSA-174084 "APC/C:Cdc20 mediated degradation of Securin";"Antigen processing: Ubiquitination & Proteasome degradation";"APC-Cdc20 mediated degradation of Nek2A";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"Phosphorylation of the APC/C";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"Transcriptional Regulation by VENTX";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Regulation of APC/C activators between G1/S and early anaphase";"CDK-mediated phosphorylation and removal of Cdc6";"Senescence-Associated Secretory Phenotype (SASP)";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B";"Autodegradation of Cdh1 by Cdh1:APC/C" CFLO007792-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO012358-PA 13 Reactome: R-HSA-3000178;Reactome: R-HSA-1650814;Reactome: R-HSA-3000171;Reactome: R-HSA-216083;Reactome: R-HSA-3000157;Reactome: R-HSA-2022090;Reactome: R-HSA-1474244;Reactome: R-HSA-8948216;Reactome: R-HSA-1442490;Reactome: R-HSA-186797;Reactome: R-HSA-2214320;Reactome: R-HSA-419037;Reactome: R-HSA-2243919 "ECM proteoglycans";"Collagen biosynthesis and modifying enzymes";"Non-integrin membrane-ECM interactions";"Integrin cell surface interactions";"Laminin interactions";"Assembly of collagen fibrils and other multimeric structures";"Extracellular matrix organization";"Collagen chain trimerization";"Collagen degradation";"Signaling by PDGF";"Anchoring fibril formation";"NCAM1 interactions";"Crosslinking of collagen fibrils" CFLO017365-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO006510-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" CFLO008626-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO014390-PA 2 Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO014398-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO000332-PA 1 Reactome: R-HSA-264876 "Insulin processing" CFLO007044-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" CFLO004167-PA 2 Reactome: R-HSA-5683371;Reactome: R-HSA-1369007 "Defective ABCB6 causes isolated colobomatous microphthalmia 7 (MCOPCB7)";"Mitochondrial ABC transporters" CFLO010959-PA 14 MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;Reactome: R-HSA-75876;MetaCyc: PWY-7725;MetaCyc: PWY-8041;MetaCyc: PWY-7035;MetaCyc: PWY-7619;MetaCyc: PWY-7036;MetaCyc: PWY-7724;MetaCyc: PWY-5972;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7602;MetaCyc: PWY-7601 "Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"(9Z)-tricosene biosynthesis";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis II";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Stearate biosynthesis I (animals)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" CFLO004460-PA 6 KEGG: 00230+4.1.1.21;MetaCyc: PWY-6124;MetaCyc: PWY-6123;Reactome: R-HSA-73817;MetaCyc: PWY-7234;KEGG: 00230+6.3.2.6 "Purine metabolism";"Inosine-5'-phosphate biosynthesis II";"Inosine-5'-phosphate biosynthesis I";"Purine ribonucleoside monophosphate biosynthesis";"Inosine-5'-phosphate biosynthesis III";"Purine metabolism" CFLO001544-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-1989781 "Transcriptional activation of mitochondrial biogenesis";"PPARA activates gene expression" CFLO014618-PA 3 Reactome: R-HSA-611105;Reactome: R-HSA-1268020;Reactome: R-HSA-6799198 "Respiratory electron transport";"Mitochondrial protein import";"Complex I biogenesis" CFLO006541-PA 5 KEGG: 04070+2.7.7.41;MetaCyc: PWY-5667;MetaCyc: PWY-7817;MetaCyc: PWY-5981;KEGG: 00564+2.7.7.41 "Phosphatidylinositol signaling system";"CDP-diacylglycerol biosynthesis I";"Type I lipoteichoic acid biosynthesis (S. aureus)";"CDP-diacylglycerol biosynthesis III";"Glycerophospholipid metabolism" CFLO004851-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO014496-PA 3 Reactome: R-HSA-5628897;KEGG: 00480+1.11.1.15;Reactome: R-HSA-3299685 "TP53 Regulates Metabolic Genes";"Glutathione metabolism";"Detoxification of Reactive Oxygen Species" CFLO001029-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" CFLO005127-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-212436;Reactome: R-HSA-1989781 "Transcriptional regulation of white adipocyte differentiation";"Generic Transcription Pathway";"PPARA activates gene expression" CFLO000999-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO013092-PA 5 Reactome: R-HSA-9615710;Reactome: R-HSA-162588;Reactome: R-HSA-9610379;Reactome: R-HSA-174490;Reactome: R-HSA-917729 "Late endosomal microautophagy";"Budding and maturation of HIV virion";"HCMV Late Events";"Membrane binding and targetting of GAG proteins";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO014128-PA 1 Reactome: R-HSA-6798695 "Neutrophil degranulation" CFLO017853-PA 1 Reactome: R-HSA-2024096 "HS-GAG degradation" CFLO013670-PA 3 Reactome: R-HSA-73856;Reactome: R-HSA-159236;Reactome: R-HSA-72187 "RNA Polymerase II Transcription Termination";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"mRNA 3'-end processing" CFLO012980-PA 2 Reactome: R-HSA-201722;Reactome: R-HSA-171319 "Formation of the beta-catenin:TCF transactivating complex";"Telomere Extension By Telomerase" CFLO012044-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" CFLO007735-PA 1 Reactome: R-HSA-9022692 "Regulation of MECP2 expression and activity" CFLO012764-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" CFLO015013-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO014070-PA 2 Reactome: R-HSA-456926;Reactome: R-HSA-416482 "Thrombin signalling through proteinase activated receptors (PARs)";"G alpha (12/13) signalling events" CFLO000860-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" CFLO019772-PA 4 Reactome: R-HSA-674695;Reactome: R-HSA-8866654;Reactome: R-HSA-75955;Reactome: R-HSA-112382 "RNA Polymerase II Pre-transcription Events";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex" CFLO000993-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO011839-PA 1 KEGG: 00970+6.1.1.7 "Aminoacyl-tRNA biosynthesis" CFLO006930-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO018365-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-5689880 "Protein ubiquitination";"Ub-specific processing proteases" CFLO018678-PA 1 Reactome: R-HSA-8849932 "Synaptic adhesion-like molecules" CFLO000124-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO009859-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO003386-PA 8 Reactome: R-HSA-166208;Reactome: R-HSA-8943724;Reactome: R-HSA-165159;Reactome: R-HSA-380972;Reactome: R-HSA-3371571;Reactome: R-HSA-5628897;Reactome: R-HSA-9639288;Reactome: R-HSA-1632852 "mTORC1-mediated signalling";"Regulation of PTEN gene transcription";"mTOR signalling";"Energy dependent regulation of mTOR by LKB1-AMPK";"HSF1-dependent transactivation";"TP53 Regulates Metabolic Genes";"Amino acids regulate mTORC1";"Macroautophagy" CFLO007783-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO012708-PA 2 Reactome: R-HSA-181429;Reactome: R-HSA-212676 "Serotonin Neurotransmitter Release Cycle";"Dopamine Neurotransmitter Release Cycle" CFLO014839-PA 1 Reactome: R-HSA-5693607 "Processing of DNA double-strand break ends" CFLO000835-PA 1 Reactome: R-HSA-6811436 "COPI-independent Golgi-to-ER retrograde traffic" CFLO004533-PA 2 Reactome: R-HSA-376176;Reactome: R-HSA-202433 "Signaling by ROBO receptors";"Generation of second messenger molecules" CFLO011990-PA 1 Reactome: R-HSA-446193 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO001444-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO001102-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO017590-PA 5 MetaCyc: PWY-6749;MetaCyc: PWY-8013;KEGG: 00250+2.6.1.16;KEGG: 00520+2.6.1.16;Reactome: R-HSA-446210 "CMP-legionaminate biosynthesis I";"UDP-N-acetyl-D-galactosamine biosynthesis III";"Alanine, aspartate and glutamate metabolism";"Amino sugar and nucleotide sugar metabolism";"Synthesis of UDP-N-acetyl-glucosamine" CFLO004064-PA 4 MetaCyc: PWY-7221;KEGG: 00230+2.7.4.8;Reactome: R-HSA-499943;Reactome: R-HSA-2161541 "Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Interconversion of nucleotide di- and triphosphates";"Abacavir metabolism" CFLO012158-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" CFLO011518-PA 56 Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-68827;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-180534;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-5689603;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-5668541;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5676590;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-2467813;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768 "RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"CDT1 association with the CDC6:ORC:origin complex";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Vpu mediated degradation of CD4";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"UCH proteinases";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"TNFR2 non-canonical NF-kB pathway";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"NIK-->noncanonical NF-kB signaling";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Separation of Sister Chromatids";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD" CFLO012111-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" CFLO012701-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO019378-PA 7 Reactome: R-HSA-76061;Reactome: R-HSA-76071;Reactome: R-HSA-73980;Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-73780;Reactome: R-HSA-76066 "RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter" CFLO006678-PA 2 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation" CFLO001255-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" CFLO001546-PA 2 Reactome: R-HSA-201681;Reactome: R-HSA-3772470 "TCF dependent signaling in response to WNT";"Negative regulation of TCF-dependent signaling by WNT ligand antagonists" CFLO015867-PA 1 Reactome: R-HSA-2559584 "Formation of Senescence-Associated Heterochromatin Foci (SAHF)" CFLO004652-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO005109-PA 2 Reactome: R-HSA-425366;Reactome: R-HSA-1483191 "Transport of bile salts and organic acids, metal ions and amine compounds";"Synthesis of PC" CFLO000032-PA 6 Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-389957;Reactome: R-HSA-389960;Reactome: R-HSA-5620922;Reactome: R-HSA-390450 "Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Prefoldin mediated transfer of substrate to CCT/TriC";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium";"Folding of actin by CCT/TriC" CFLO005865-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO018759-PA 3 Reactome: R-HSA-6807878;Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" CFLO000861-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO000386-PA 1 Reactome: R-HSA-5693571 "Nonhomologous End-Joining (NHEJ)" CFLO000824-PA 1 Reactome: R-HSA-1614558 "Degradation of cysteine and homocysteine" CFLO014806-PA 57 Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-174084;Reactome: R-HSA-5668541;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-4641257;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-6798695;Reactome: R-HSA-202424;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-180534;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178 "Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Autodegradation of Cdh1 by Cdh1:APC/C";"TNFR2 non-canonical NF-kB pathway";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Degradation of AXIN";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Neutrophil degranulation";"Downstream TCR signaling";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Vpu mediated degradation of CD4";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1" CFLO012782-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO011851-PA 2 Reactome: R-HSA-8866904;Reactome: R-HSA-8866907 "Negative regulation of activity of TFAP2 (AP-2) family transcription factors";"Activation of the TFAP2 (AP-2) family of transcription factors" CFLO005811-PA 12 Reactome: R-HSA-674695;Reactome: R-HSA-167238;Reactome: R-HSA-167290;Reactome: R-HSA-167200;Reactome: R-HSA-6804756;Reactome: R-HSA-75955;Reactome: R-HSA-167152;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-167287;Reactome: R-HSA-167243;Reactome: R-HSA-167246 "RNA Polymerase II Pre-transcription Events";"Pausing and recovery of Tat-mediated HIV elongation";"Pausing and recovery of HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Transcription Elongation";"Formation of HIV elongation complex in the absence of HIV Tat";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"HIV elongation arrest and recovery";"Tat-mediated HIV elongation arrest and recovery";"Tat-mediated elongation of the HIV-1 transcript" CFLO013407-PA 16 Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957 "Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"Peptide chain elongation";"Translation initiation complex formation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO002141-PA 2 Reactome: R-HSA-6784531;Reactome: R-HSA-6791226 "tRNA processing in the nucleus";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO015871-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO007361-PA 25 Reactome: R-HSA-8939245;Reactome: R-HSA-8949275;Reactome: R-HSA-8941284;Reactome: R-HSA-8934593;Reactome: R-HSA-8936459;Reactome: R-HSA-8941332;Reactome: R-HSA-8951936;Reactome: R-HSA-8951911;Reactome: R-HSA-8941333;Reactome: R-HSA-8931987;Reactome: R-HSA-8939902;Reactome: R-HSA-8941858;Reactome: R-HSA-9616222;Reactome: R-HSA-8878166;Reactome: R-HSA-8941326;Reactome: R-HSA-8935964;Reactome: R-HSA-9018519;Reactome: R-HSA-8939242;Reactome: R-HSA-8939236;Reactome: R-HSA-8940973;Reactome: R-HSA-8939247;Reactome: R-HSA-8877330;Reactome: R-HSA-8939256;Reactome: R-HSA-8939243;Reactome: R-HSA-8939246 "RUNX1 regulates transcription of genes involved in BCR signaling";"RUNX3 Regulates Immune Response and Cell Migration";"RUNX2 regulates chondrocyte maturation";"Regulation of RUNX1 Expression and Activity";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"RUNX2 regulates genes involved in cell migration";"RUNX3 regulates p14-ARF";"RUNX3 regulates RUNX1-mediated transcription";"RUNX2 regulates genes involved in differentiation of myeloid cells";"RUNX1 regulates estrogen receptor mediated transcription";"Regulation of RUNX2 expression and activity";"Regulation of RUNX3 expression and activity";"Transcriptional regulation of granulopoiesis";"Transcriptional regulation by RUNX2";"RUNX2 regulates bone development";"RUNX1 regulates expression of components of tight junctions";"Estrogen-dependent gene expression";"RUNX1 regulates transcription of genes involved in differentiation of keratinocytes";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"RUNX2 regulates osteoblast differentiation";"RUNX1 regulates transcription of genes involved in interleukin signaling";"RUNX1 and FOXP3 control the development of regulatory T lymphocytes (Tregs)";"RUNX1 regulates transcription of genes involved in WNT signaling";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known";"RUNX1 regulates transcription of genes involved in differentiation of myeloid cells" CFLO007877-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO010984-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO004367-PA 3 Reactome: R-HSA-8951664;Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "Neddylation";"rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO001524-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO012191-PA 6 Reactome: R-HSA-72706;Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72702 "GTP hydrolysis and joining of the 60S ribosomal subunit";"Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"Ribosomal scanning and start codon recognition" CFLO006277-PA 7 Reactome: R-HSA-1655829;Reactome: R-HSA-168333;Reactome: R-HSA-165054;Reactome: R-HSA-180746;Reactome: R-HSA-6784531;Reactome: R-HSA-203927;Reactome: R-HSA-5578749 "Regulation of cholesterol biosynthesis by SREBP (SREBF)";"NEP/NS2 Interacts with the Cellular Export Machinery";"Rev-mediated nuclear export of HIV RNA";"Nuclear import of Rev protein";"tRNA processing in the nucleus";"MicroRNA (miRNA) biogenesis";"Transcriptional regulation by small RNAs" CFLO007144-PA 2 Reactome: R-HSA-983189;Reactome: R-HSA-6811434 "Kinesins";"COPI-dependent Golgi-to-ER retrograde traffic" CFLO015003-PA 3 MetaCyc: PWY-4261;KEGG: 00561+2.7.1.30;Reactome: R-HSA-75109 "Glycerol degradation I";"Glycerolipid metabolism";"Triglyceride biosynthesis" CFLO009344-PA 2 Reactome: R-HSA-432720;Reactome: R-HSA-432722 "Lysosome Vesicle Biogenesis";"Golgi Associated Vesicle Biogenesis" CFLO015919-PA 4 Reactome: R-HSA-352230;Reactome: R-HSA-71240;Reactome: R-HSA-5660862;Reactome: R-HSA-210991 "Amino acid transport across the plasma membrane";"Tryptophan catabolism";"Defective SLC7A7 causes lysinuric protein intolerance (LPI)";"Basigin interactions" CFLO000330-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" CFLO017448-PA 1 Reactome: R-HSA-3108214 "SUMOylation of DNA damage response and repair proteins" CFLO008961-PA 3 KEGG: 00970+2.1.2.9;KEGG: 00670+2.1.2.9;Reactome: R-HSA-5368286 "Aminoacyl-tRNA biosynthesis";"One carbon pool by folate";"Mitochondrial translation initiation" CFLO001122-PA 7 Reactome: R-HSA-73780;Reactome: R-HSA-76066;Reactome: R-HSA-76061;Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-73980;Reactome: R-HSA-76071 "RNA Polymerase III Chain Elongation";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 3 Promoter" CFLO017740-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO003629-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO003630-PA 5 Reactome: R-HSA-5250924;Reactome: R-HSA-73762;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-427413 "B-WICH complex positively regulates rRNA expression";"RNA Polymerase I Transcription Initiation";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"NoRC negatively regulates rRNA expression" CFLO015409-PA 4 Reactome: R-HSA-8856825;Reactome: R-HSA-8951664;Reactome: R-HSA-6781823;Reactome: R-HSA-5696394 "Cargo recognition for clathrin-mediated endocytosis";"Neddylation";"Formation of TC-NER Pre-Incision Complex";"DNA Damage Recognition in GG-NER" CFLO001882-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO015227-PA 8 Reactome: R-HSA-68952;Reactome: R-HSA-113501;Reactome: R-HSA-69091;Reactome: R-HSA-69183;Reactome: R-HSA-174430;Reactome: R-HSA-174411;Reactome: R-HSA-68962;Reactome: R-HSA-69166 "DNA replication initiation";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Polymerase switching";"Processive synthesis on the lagging strand";"Telomere C-strand synthesis initiation";"Polymerase switching on the C-strand of the telomere";"Activation of the pre-replicative complex";"Removal of the Flap Intermediate" CFLO004063-PA 10 KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;Reactome: R-HSA-442742;Reactome: R-HSA-444257;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;Reactome: R-HSA-437239;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"mTOR signaling pathway";"Thermogenesis";"Human immunodeficiency virus 1 infection";"CREB1 phosphorylation through NMDA receptor-mediated activation of RAS signaling";"RSK activation";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Recycling pathway of L1";"Human cytomegalovirus infection" CFLO005138-PA 1 Reactome: R-HSA-5683826 "Surfactant metabolism" CFLO005481-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO010863-PA 14 MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-5080;MetaCyc: PWY-7036;MetaCyc: PWY-5972;MetaCyc: PWY-7619;MetaCyc: PWY-7724;MetaCyc: PWY-6598;MetaCyc: PWY-7035;MetaCyc: PWY-6433;KEGG: 00062+2.3.1.199;MetaCyc: PWY-8041;Reactome: R-HSA-75876;MetaCyc: PWY-7725 "Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Very long chain fatty acid biosynthesis I";"Very long chain fatty acid biosynthesis II";"Stearate biosynthesis I (animals)";"Juniperonate biosynthesis";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Sciadonate biosynthesis";"(9Z)-tricosene biosynthesis";"Hydroxylated fatty acid biosynthesis (plants)";"Fatty acid elongation";"Ultra-long-chain fatty acid biosynthesis";"Synthesis of very long-chain fatty acyl-CoAs";"Arachidonate biosynthesis V (8-detaturase, mammals)" CFLO007812-PA 1 Reactome: R-HSA-1660661 "Sphingolipid de novo biosynthesis" CFLO004493-PA 5 MetaCyc: PWY-5188;Reactome: R-HSA-6798695;Reactome: R-HSA-189451;KEGG: 00860+4.2.1.24;MetaCyc: PWY-5189 "Tetrapyrrole biosynthesis I (from glutamate)";"Neutrophil degranulation";"Heme biosynthesis";"Porphyrin and chlorophyll metabolism";"Tetrapyrrole biosynthesis II (from glycine)" CFLO004217-PA 8 KEGG: 05163+2.7.11.1;KEGG: 04151+2.7.11.1;Reactome: R-HSA-9633012;KEGG: 05165+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1 "Human cytomegalovirus infection";"PI3K-Akt signaling pathway";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Human papillomavirus infection";"Human immunodeficiency virus 1 infection";"mTOR signaling pathway";"Relaxin signaling pathway";"Thermogenesis" CFLO001979-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" CFLO000021-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO010332-PA 14 Reactome: R-HSA-5651801;Reactome: R-HSA-110320;Reactome: R-HSA-5656121;Reactome: R-HSA-69091;Reactome: R-HSA-5655862;Reactome: R-HSA-5696400;Reactome: R-HSA-110312;Reactome: R-HSA-174411;Reactome: R-HSA-5656169;Reactome: R-HSA-6782135;Reactome: R-HSA-110314;Reactome: R-HSA-6782210;Reactome: R-HSA-5696397;Reactome: R-HSA-5685942 "PCNA-Dependent Long Patch Base Excision Repair";"Translesion Synthesis by POLH";"Translesion synthesis by POLI";"Polymerase switching";"Translesion synthesis by POLK";"Dual Incision in GG-NER";"Translesion synthesis by REV1";"Polymerase switching on the C-strand of the telomere";"Termination of translesion DNA synthesis";"Dual incision in TC-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"HDR through Homologous Recombination (HRR)" CFLO005107-PA 3 Reactome: R-HSA-445355;Reactome: R-HSA-392154;KEGG: 00230+4.6.1.2 "Smooth Muscle Contraction";"Nitric oxide stimulates guanylate cyclase";"Purine metabolism" CFLO018552-PA 3 MetaCyc: PWY-5129;KEGG: 00600+1.14.19.17;Reactome: R-HSA-1660661 "Sphingolipid biosynthesis (plants)";"Sphingolipid metabolism";"Sphingolipid de novo biosynthesis" CFLO003653-PA 1 KEGG: 00970+6.3.5.7 "Aminoacyl-tRNA biosynthesis" CFLO013278-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO008822-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO000983-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO000899-PA 2 Reactome: R-HSA-2299718;Reactome: R-HSA-2514853 "Condensation of Prophase Chromosomes";"Condensation of Prometaphase Chromosomes" CFLO008833-PA 2 Reactome: R-HSA-6790901;Reactome: R-HSA-6791226 "rRNA modification in the nucleus and cytosol";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO000062-PA 1 Reactome: R-HSA-6807878 "COPI-mediated anterograde transport" CFLO004163-PA 1 Reactome: R-HSA-71288 "Creatine metabolism" CFLO012165-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO007343-PA 1 Reactome: R-HSA-425410 "Metal ion SLC transporters" CFLO009842-PA 1 MetaCyc: PWY-6829 "Trna methylation (yeast)" CFLO016529-PA 17 KEGG: 00760+2.4.2.1;MetaCyc: PWY-7179;MetaCyc: PWY-7179-1;Reactome: R-HSA-74217;MetaCyc: PWY-6644;MetaCyc: PWY-5532;MetaCyc: PWY-6627;MetaCyc: PWY-6611;MetaCyc: PWY-6609;Reactome: R-HSA-74259;MetaCyc: PWY-6620;KEGG: 00230+2.4.2.1;MetaCyc: PWY-5695;KEGG: 00240+2.4.2.1;MetaCyc: PWY-6608;Reactome: R-HSA-6798695;MetaCyc: PWY-4202 "Nicotinate and nicotinamide metabolism";"Purine deoxyribonucleosides degradation I";"Purine deoxyribonucleosides degradation II";"Purine salvage";"Fluoroacetate and fluorothreonine biosynthesis";"Nucleoside and nucleotide degradation (archaea)";"Salinosporamide A biosynthesis";"Adenine and adenosine salvage V";"Adenine and adenosine salvage III";"Purine catabolism";"Guanine and guanosine salvage";"Purine metabolism";"Inosine 5'-phosphate degradation";"Pyrimidine metabolism";"Guanosine nucleotides degradation III";"Neutrophil degranulation";"Arsenate detoxification I (mammalian)" CFLO017709-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO001996-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO002449-PA 4 Reactome: R-HSA-1614558;MetaCyc: PWY-5331;KEGG: 00430+1.13.11.20;KEGG: 00270+1.13.11.20 "Degradation of cysteine and homocysteine";"Taurine biosynthesis I";"Taurine and hypotaurine metabolism";"Cysteine and methionine metabolism" CFLO009612-PA 1 Reactome: R-HSA-8964038 "LDL clearance" CFLO013577-PA 2 Reactome: R-HSA-8869496;Reactome: R-HSA-6790901 "TFAP2A acts as a transcriptional repressor during retinoic acid induced cell differentiation";"rRNA modification in the nucleus and cytosol" CFLO016566-PA 1 Reactome: R-HSA-8876725 "Protein methylation" CFLO003536-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO014085-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO009454-PA 1 Reactome: R-HSA-4419969 "Depolymerisation of the Nuclear Lamina" CFLO003990-PA 56 Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-187577;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-180585;Reactome: R-HSA-5610785;Reactome: R-HSA-4641257;Reactome: R-HSA-68827;Reactome: R-HSA-1236978;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780 "Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"SCF(Skp2)-mediated degradation of p27/p21";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome";"Degradation of AXIN";"CDT1 association with the CDC6:ORC:origin complex";"Cross-presentation of soluble exogenous antigens (endosomes)";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome" CFLO004489-PA 56 Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-1236974;Reactome: R-HSA-75815;Reactome: R-HSA-5668541;Reactome: R-HSA-5689603;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-180534;Reactome: R-HSA-382556;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-1169091;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785 "NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"ER-Phagosome pathway";"Ubiquitin-dependent degradation of Cyclin D";"TNFR2 non-canonical NF-kB pathway";"UCH proteinases";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"Vpu mediated degradation of CD4";"ABC-family proteins mediated transport";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Activation of NF-kappaB in B cells";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome" CFLO012286-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO004683-PA 7 MetaCyc: PWY-46;KEGG: 00220+3.5.3.1;MetaCyc: PWY-6922;MetaCyc: PWY-4984;Reactome: R-HSA-70635;MetaCyc: PWY-31;KEGG: 00330+3.5.3.1 "Putrescine biosynthesis III";"Arginine biosynthesis";"L-Ndelta-acetylornithine biosynthesis";"Urea cycle";"Urea cycle";"Canavanine degradation";"Arginine and proline metabolism" CFLO018725-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO005894-PA 8 Reactome: R-HSA-6804758;Reactome: R-HSA-877300;Reactome: R-HSA-3232142;Reactome: R-HSA-8934593;Reactome: R-HSA-3108214;Reactome: R-HSA-9616222;Reactome: R-HSA-8948747;Reactome: R-HSA-9609690 "Regulation of TP53 Activity through Acetylation";"Interferon gamma signaling";"SUMOylation of ubiquitinylation proteins";"Regulation of RUNX1 Expression and Activity";"SUMOylation of DNA damage response and repair proteins";"Transcriptional regulation of granulopoiesis";"Regulation of PTEN localization";"HCMV Early Events" CFLO002872-PA 1 KEGG: 00970+6.1.1.22 "Aminoacyl-tRNA biosynthesis" CFLO013619-PA 2 Reactome: R-HSA-5696394;Reactome: R-HSA-5689603 "DNA Damage Recognition in GG-NER";"UCH proteinases" CFLO002636-PA 7 Reactome: R-HSA-2500257;Reactome: R-HSA-5663220;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-9648025;Reactome: R-HSA-68877;Reactome: R-HSA-606279 "Resolution of Sister Chromatid Cohesion";"RHO GTPases Activate Formins";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase";"Deposition of new CENPA-containing nucleosomes at the centromere" CFLO015628-PA 3 MetaCyc: PWY-8106;Reactome: R-HSA-6782315;MetaCyc: PWY-6700 "Queuosine biosynthesis III (queuosine salvage)";"tRNA modification in the nucleus and cytosol";"Queuosine biosynthesis I (de novo)" CFLO008030-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO001007-PA 2 Reactome: R-HSA-3238698;Reactome: R-HSA-373080 "WNT ligand biogenesis and trafficking";"Class B/2 (Secretin family receptors)" CFLO001445-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" CFLO008834-PA 3 Reactome: R-HSA-6798695;KEGG: 00790+3.4.19.9;MetaCyc: PWY-2161B "Neutrophil degranulation";"Folate biosynthesis";"Glutamate removal from folates" CFLO013259-PA 1 Reactome: R-HSA-611105 "Respiratory electron transport" CFLO018137-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO017511-PA 5 Reactome: R-HSA-2470946;Reactome: R-HSA-2468052;Reactome: R-HSA-2467813;Reactome: R-HSA-5578775;Reactome: R-HSA-2500257 "Cohesin Loading onto Chromatin";"Establishment of Sister Chromatid Cohesion";"Separation of Sister Chromatids";"Ion homeostasis";"Resolution of Sister Chromatid Cohesion" CFLO010224-PA 6 KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;Reactome: R-HSA-114508;KEGG: 00561+2.7.1.107;MetaCyc: PWY-7817;KEGG: 00564+2.7.1.107 "Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Effects of PIP2 hydrolysis";"Glycerolipid metabolism";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerophospholipid metabolism" CFLO000590-PA 5 MetaCyc: PWY-3341;KEGG: 00330+1.5.1.2;Reactome: R-HSA-8964539;MetaCyc: PWY-6344;MetaCyc: PWY-4981 "L-proline biosynthesis III (from L-ornithine)";"Arginine and proline metabolism";"Glutamate and glutamine metabolism";"L-ornithine degradation II (Stickland reaction)";"L-proline biosynthesis II (from arginine)" CFLO019592-PA 32 Reactome: R-HSA-75955;Reactome: R-HSA-167162;Reactome: R-HSA-9018519;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-167290;Reactome: R-HSA-72163;Reactome: R-HSA-167161;Reactome: R-HSA-76042;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160;Reactome: R-HSA-167246;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-73776;Reactome: R-HSA-167172;Reactome: R-HSA-6807505;Reactome: R-HSA-72203;Reactome: R-HSA-72165;Reactome: R-HSA-6803529;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-168325;Reactome: R-HSA-8851708;Reactome: R-HSA-75953;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-6796648;Reactome: R-HSA-73779;Reactome: R-HSA-112382 "RNA Polymerase II Transcription Elongation";"RNA Polymerase II HIV Promoter Escape";"Estrogen-dependent gene expression";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Pausing and recovery of HIV elongation";"mRNA Splicing - Major Pathway";"HIV Transcription Initiation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Tat-mediated elongation of the HIV-1 transcript";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Promoter Escape";"Transcription of the HIV genome";"RNA polymerase II transcribes snRNA genes";"Processing of Capped Intron-Containing Pre-mRNA";"mRNA Splicing - Minor Pathway";"FGFR2 alternative splicing";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Viral Messenger RNA Synthesis";"Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Initiation";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Formation of RNA Pol II elongation complex" CFLO007293-PA 3 Reactome: R-HSA-70350;KEGG: 00051+2.7.1.3;Reactome: R-HSA-5657562 "Fructose catabolism";"Fructose and mannose metabolism";"Essential fructosuria" CFLO002146-PA 14 MetaCyc: PWY-6453;MetaCyc: PWY-5667;MetaCyc: PWY-8055;MetaCyc: PWY-7417;Reactome: R-HSA-1483166;MetaCyc: PWY-7782;MetaCyc: PWY-7587;KEGG: 00561+2.3.1.51;MetaCyc: PWY-7411;KEGG: 00564+2.3.1.51;MetaCyc: PWY-8051;MetaCyc: PWY-5981;MetaCyc: PWY-7589;MetaCyc: PWY-8053 "Stigma estolide biosynthesis";"CDP-diacylglycerol biosynthesis I";"Palmitoyl ethanolamide biosynthesis";"Phospholipid remodeling (phosphatidate, yeast)";"Synthesis of PA";"Plasmalogen biosynthesis";"Oleate biosynthesis III (cyanobacteria)";"Glycerolipid metabolism";"Phosphatidate biosynthesis (yeast)";"Glycerophospholipid metabolism";"Anandamide biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Palmitoleate biosynthesis III (cyanobacteria)";"Anandamide biosynthesis II" CFLO013646-PA 7 Reactome: R-HSA-5626467;Reactome: R-HSA-68877;Reactome: R-HSA-9648025;Reactome: R-HSA-5663220;Reactome: R-HSA-2467813;Reactome: R-HSA-141444;Reactome: R-HSA-2500257 "RHO GTPases activate IQGAPs";"Mitotic Prometaphase";"EML4 and NUDC in mitotic spindle formation";"RHO GTPases Activate Formins";"Separation of Sister Chromatids";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion" CFLO011038-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO008164-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" CFLO004101-PA 1 Reactome: R-HSA-110320 "Translesion Synthesis by POLH" CFLO013263-PA 4 Reactome: R-HSA-379726;Reactome: R-HSA-379716;Reactome: R-HSA-2408522;KEGG: 00970+6.1.1.6 "Mitochondrial tRNA aminoacylation";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism";"Aminoacyl-tRNA biosynthesis" CFLO006176-PA 1 Reactome: R-HSA-212436 "Generic Transcription Pathway" CFLO006260-PA 2 MetaCyc: PWY-6281;KEGG: 00970+6.1.1.11 "L-selenocysteine biosynthesis II (archaea and eukaryotes)";"Aminoacyl-tRNA biosynthesis" CFLO003437-PA 4 Reactome: R-HSA-77387;Reactome: R-HSA-917977;Reactome: R-HSA-1222556;Reactome: R-HSA-983712 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"ROS and RNS production in phagocytes";"Ion channel transport" CFLO011836-PA 60 KEGG: 00310+4.2.1.17+1.1.1.35;Reactome: R-HSA-77305;MetaCyc: PWY-5177;KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35;MetaCyc: PWY-6945;MetaCyc: PWY-5109;Reactome: R-HSA-77285;KEGG: 00362+4.2.1.17;KEGG: 00062+4.2.1.17+1.1.1.211;KEGG: 00650+4.2.1.17;Reactome: R-HSA-1482798;MetaCyc: PWY-7779;KEGG: 00280+4.2.1.17+1.1.1.35;MetaCyc: PWY-7726;KEGG: 00592+4.2.1.17;KEGG: 00310+4.2.1.17;MetaCyc: PWY-6583;Reactome: R-HSA-77288;MetaCyc: PWY-7007;KEGG: 00410+4.2.1.17;MetaCyc: PWY-7216;MetaCyc: PWY-7401;MetaCyc: PWY-5138;KEGG: 00281+4.2.1.17;MetaCyc: PWY-7654;Reactome: R-HSA-77348;KEGG: 00380+4.2.1.17;KEGG: 00930+4.2.1.17+1.1.1.35;KEGG: 00280+4.2.1.17;KEGG: 00623+1.1.1.35;KEGG: 00071+4.2.1.17+1.1.1.211;KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35;MetaCyc: PWY-6946;KEGG: 00650+4.2.1.17+1.1.1.35;MetaCyc: PWY-6435;KEGG: 00281+4.2.1.17+1.1.1.35;Reactome: R-HSA-77346;KEGG: 00071+4.2.1.17+1.1.1.35;Reactome: R-HSA-77310;MetaCyc: PWY-6863;MetaCyc: PWY-7094;KEGG: 00362+4.2.1.17+1.1.1.35;KEGG: 00930+4.2.1.17;KEGG: 00380+4.2.1.17+1.1.1.35;KEGG: 00640+4.2.1.17;MetaCyc: PWY-6944;KEGG: 00360+4.2.1.17;MetaCyc: PWY-5136;KEGG: 00720+4.2.1.17+1.1.1.35;MetaCyc: PWY-7778;Reactome: R-HSA-77350;MetaCyc: PWY-5789;MetaCyc: PWY-7656;KEGG: 00062+4.2.1.17+1.1.1.35;KEGG: 00627+4.2.1.17;MetaCyc: PWY-7606;MetaCyc: PWY-1361;KEGG: 00720+4.2.1.17;KEGG: 00903+4.2.1.17;MetaCyc: PWY-6883 "Lysine degradation";"Beta oxidation of palmitoyl-CoA to myristoyl-CoA";"Glutaryl-coa degradation";"Butanoate metabolism";"Cholesterol degradation to androstenedione I (cholesterol oxidase)";"Fermentation to 2-methylbutanoate";"Beta oxidation of myristoyl-CoA to lauroyl-CoA";"Benzoate degradation";"Fatty acid elongation";"Butanoate metabolism";"Acyl chain remodeling of CL";"Methyl tert-butyl ether degradation";"Valine, leucine and isoleucine degradation";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"alpha-Linolenic acid metabolism";"Lysine degradation";"Pyruvate fermentation to butanol I";"mitochondrial fatty acid beta-oxidation of unsaturated fatty acids";"Methyl ketone biosynthesis (engineered)";"beta-Alanine metabolism";"(R)- and (S)-3-hydroxybutanoate biosynthesis (engineered)";"Crotonate fermentation (to acetate and cyclohexane carboxylate)";"Fatty acid beta-oxidation IV (unsaturated, even number)";"Geraniol degradation";"(8E,10E)-dodeca-8,10-dienol biosynthesis";"Beta oxidation of octanoyl-CoA to hexanoyl-CoA";"Tryptophan metabolism";"Caprolactam degradation";"Valine, leucine and isoleucine degradation";"Toluene degradation";"Fatty acid degradation";"Fatty acid degradation";"Cholesterol degradation to androstenedione II (cholesterol dehydrogenase)";"Butanoate metabolism";"4-hydroxybenzoate biosynthesis III (plants)";"Geraniol degradation";"Beta oxidation of decanoyl-CoA to octanoyl-CoA-CoA";"Fatty acid degradation";"Beta oxidation of lauroyl-CoA to decanoyl-CoA-CoA";"Pyruvate fermentation to hexanol (engineered)";"Fatty acid salvage";"Benzoate degradation";"Caprolactam degradation";"Tryptophan metabolism";"Propanoate metabolism";"Androstenedione degradation";"Phenylalanine metabolism";"Fatty acid beta-oxidation II (plant peroxisome)";"Carbon fixation pathways in prokaryotes";"2-methylpropene degradation";"Beta oxidation of hexanoyl-CoA to butanoyl-CoA";"3-hydroxypropanoate/4-hydroxybutanate cycle";"Spodoptera littoralis pheromone biosynthesis";"Fatty acid elongation";"Aminobenzoate degradation";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Benzoyl-coa degradation I (aerobic)";"Carbon fixation pathways in prokaryotes";"Limonene and pinene degradation";"Pyruvate fermentation to butanol II (engineered)" CFLO010827-PA 7 MetaCyc: PWY-6969;MetaCyc: PWY-7118;MetaCyc: PWY-7295;KEGG: 00630+2.3.3.9;MetaCyc: PWY-7294;MetaCyc: PWY-7854;KEGG: 00620+2.3.3.9 "TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Chitin degradation to ethanol";"L-arabinose degradation IV";"Glyoxylate and dicarboxylate metabolism";"D-xylose degradation IV";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"Pyruvate metabolism" CFLO002572-PA 2 Reactome: R-HSA-201722;Reactome: R-HSA-3769402 "Formation of the beta-catenin:TCF transactivating complex";"Deactivation of the beta-catenin transactivating complex" CFLO015176-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO000691-PA 1 Reactome: R-HSA-5658442 "Regulation of RAS by GAPs" CFLO017589-PA 5 Reactome: R-HSA-5693571;Reactome: R-HSA-1834949;Reactome: R-HSA-3270619;Reactome: R-HSA-164843;Reactome: R-HSA-6798695 "Nonhomologous End-Joining (NHEJ)";"Cytosolic sensors of pathogen-associated DNA";"IRF3-mediated induction of type I IFN";"2-LTR circle formation";"Neutrophil degranulation" CFLO001501-PA 2 Reactome: R-HSA-202733;Reactome: R-HSA-416993 "Cell surface interactions at the vascular wall";"Trafficking of GluR2-containing AMPA receptors" CFLO007250-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" CFLO003326-PA 4 Reactome: R-HSA-5663213;Reactome: R-HSA-2029482;Reactome: R-HSA-8856828;Reactome: R-HSA-3928662 "RHO GTPases Activate WASPs and WAVEs";"Regulation of actin dynamics for phagocytic cup formation";"Clathrin-mediated endocytosis";"EPHB-mediated forward signaling" CFLO015002-PA 1 MetaCyc: PWY-6308 "L-cysteine biosynthesis II (tRNA-dependent)" CFLO018431-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO013479-PA 20 MetaCyc: PWY-7726;MetaCyc: PWY-7291;MetaCyc: PWY-7007;KEGG: 00592+1.3.3.6;MetaCyc: PWY-7574;MetaCyc: PWY-7340;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7854;KEGG: 00410+1.3.3.6;MetaCyc: PWY-735;MetaCyc: PWY-7338;MetaCyc: PWY-6920;MetaCyc: PWY-7606;MetaCyc: PWY-7337;MetaCyc: PWY-7288;Reactome: R-HSA-9033241;MetaCyc: PWY-5136;KEGG: 00071+1.3.3.6;MetaCyc: PWY-7858;MetaCyc: PWY-6837 "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Methyl ketone biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"Propanoyl-coa degradation II";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"Propanoate metabolism";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"beta-Alanine metabolism";"Jasmonic acid biosynthesis";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"6-gingerol analog biosynthesis (engineered)";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"10-cis-heptadecenoyl-CoA degradation (yeast)";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Peroxisomal protein import";"Fatty acid beta-oxidation II (plant peroxisome)";"Fatty acid degradation";"(5Z)-dodecenoate biosynthesis II";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)" CFLO009655-PA 2 Reactome: R-HSA-3214847;Reactome: R-HSA-5689880 "HATs acetylate histones";"Ub-specific processing proteases" CFLO010611-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO003382-PA 7 MetaCyc: PWY-5659;MetaCyc: PWY-882;KEGG: 00051+5.4.2.8;MetaCyc: PWY-7456;Reactome: R-HSA-446205;MetaCyc: PWY-7586;KEGG: 00520+5.4.2.8 "GDP-mannose biosynthesis";"L-ascorbate biosynthesis I (L-galactose pathway)";"Fructose and mannose metabolism";"Beta-(1,4)-mannan degradation";"Synthesis of GDP-mannose";"Beta-1,4-d-mannosyl-n-acetyl-d-glucosamine degradation";"Amino sugar and nucleotide sugar metabolism" CFLO016610-PA 13 Reactome: R-HSA-110320;Reactome: R-HSA-9646399;Reactome: R-HSA-6798695;Reactome: R-HSA-3371511;Reactome: R-HSA-5362768;Reactome: R-HSA-8866654;Reactome: R-HSA-5678895;Reactome: R-HSA-532668;Reactome: R-HSA-8876725;Reactome: R-HSA-5689896;Reactome: R-HSA-5689877;Reactome: R-HSA-5358346;Reactome: R-HSA-382556 "Translesion Synthesis by POLH";"Aggrephagy";"Neutrophil degranulation";"HSF1 activation";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"E3 ubiquitin ligases ubiquitinate target proteins";"Defective CFTR causes cystic fibrosis";"N-glycan trimming in the ER and Calnexin/Calreticulin cycle";"Protein methylation";"Ovarian tumor domain proteases";"Josephin domain DUBs";"Hedgehog ligand biogenesis";"ABC-family proteins mediated transport" CFLO006197-PA 5 MetaCyc: PWY-5653;Reactome: R-HSA-196807;MetaCyc: PWY-5381;KEGG: 00760+2.7.7.18;MetaCyc: PWY-7761 "NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde";"Nicotinate metabolism";"Pyridine nucleotide cycling (plants)";"Nicotinate and nicotinamide metabolism";"NAD salvage pathway II (PNC IV cycle)" CFLO004445-PA 3 Reactome: R-HSA-74217;MetaCyc: PWY-6619;KEGG: 00230+2.7.1.20 "Purine salvage";"Adenine and adenosine salvage VI";"Purine metabolism" CFLO008093-PA 1 MetaCyc: PWY-7437 "Protein O-[N-acetyl]-glucosylation" CFLO006483-PA 16 Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689 "Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Translation initiation complex formation";"Peptide chain elongation";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits" CFLO009772-PA 2 Reactome: R-HSA-3371599;Reactome: R-HSA-196780 "Defective HLCS causes multiple carboxylase deficiency";"Biotin transport and metabolism" CFLO006142-PA 5 Reactome: R-HSA-196807;MetaCyc: PWY-7268;MetaCyc: PWY-5083;KEGG: 00760+2.7.1.23;MetaCyc: PWY-7269 "Nicotinate metabolism";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"NAD/NADH phosphorylation and dephosphorylation";"Nicotinate and nicotinamide metabolism";"NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)" CFLO012728-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" CFLO002277-PA 1 KEGG: 00531+3.2.1.35 "Glycosaminoglycan degradation" CFLO005172-PA 2 Reactome: R-HSA-1663150;Reactome: R-HSA-1660662 "The activation of arylsulfatases";"Glycosphingolipid metabolism" CFLO006861-PA 9 KEGG: 00531+3.2.1.52;KEGG: 00513+3.2.1.52;KEGG: 00520+3.2.1.52;KEGG: 00603+3.2.1.52;KEGG: 00511+3.2.1.52;MetaCyc: PWY-7883;MetaCyc: PWY-7822;KEGG: 00604+3.2.1.52;MetaCyc: PWY-6902 "Glycosaminoglycan degradation";"Various types of N-glycan biosynthesis";"Amino sugar and nucleotide sugar metabolism";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Other glycan degradation";"Anhydromuropeptides recycling II";"Chitin degradation III (Serratia)";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation II (Vibrio)" CFLO011257-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO009366-PA 2 Reactome: R-HSA-1433557;KEGG: 04660+2.7.10.2 "Signaling by SCF-KIT";"T cell receptor signaling pathway" CFLO001112-PA 2 Reactome: R-HSA-1236394;Reactome: R-HSA-977443 "Signaling by ERBB4";"GABA receptor activation" CFLO002109-PA 5 MetaCyc: PWY-6344;MetaCyc: PWY-4981;KEGG: 00330+1.5.1.2;Reactome: R-HSA-8964539;MetaCyc: PWY-3341 "L-ornithine degradation II (Stickland reaction)";"L-proline biosynthesis II (from arginine)";"Arginine and proline metabolism";"Glutamate and glutamine metabolism";"L-proline biosynthesis III (from L-ornithine)" CFLO014195-PA 1 Reactome: R-HSA-5676934 "Protein repair" CFLO008793-PA 10 Reactome: R-HSA-210744;Reactome: R-HSA-2197563;Reactome: R-HSA-1912408;Reactome: R-HSA-2894862;Reactome: R-HSA-9013695;Reactome: R-HSA-350054;Reactome: R-HSA-2122947;Reactome: R-HSA-2644606;Reactome: R-HSA-9013508;Reactome: R-HSA-8941856 "Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"NOTCH2 intracellular domain regulates transcription";"Pre-NOTCH Transcription and Translation";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"NOTCH4 Intracellular Domain Regulates Transcription";"Notch-HLH transcription pathway";"NOTCH1 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH3 Intracellular Domain Regulates Transcription";"RUNX3 regulates NOTCH signaling" CFLO003334-PA 8 Reactome: R-HSA-68867;Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68827;Reactome: R-HSA-68949;Reactome: R-HSA-68616;Reactome: R-HSA-68689;Reactome: R-HSA-113507 "Assembly of the pre-replicative complex";"Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Orc1 removal from chromatin";"Assembly of the ORC complex at the origin of replication";"CDC6 association with the ORC:origin complex";"E2F-enabled inhibition of pre-replication complex formation" CFLO011597-PA 3 Reactome: R-HSA-5632928;Reactome: R-HSA-5358565;Reactome: R-HSA-5632968 "Defective Mismatch Repair Associated With MSH2";"Mismatch repair (MMR) directed by MSH2:MSH6 (MutSalpha)";"Defective Mismatch Repair Associated With MSH6" CFLO018013-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO014071-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO019203-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO004492-PA 7 Reactome: R-HSA-983170;Reactome: R-HSA-381042;Reactome: R-HSA-114608;Reactome: R-HSA-3371453;Reactome: R-HSA-381183;Reactome: R-HSA-381070;Reactome: R-HSA-381033 "Antigen Presentation: Folding, assembly and peptide loading of class I MHC";"PERK regulates gene expression";"Platelet degranulation";"Regulation of HSF1-mediated heat shock response";"ATF6 (ATF6-alpha) activates chaperone genes";"IRE1alpha activates chaperones";"ATF6 (ATF6-alpha) activates chaperones" CFLO011041-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO011084-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO015440-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO009727-PA 1 Reactome: R-HSA-1483255 "PI Metabolism" CFLO002750-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO014859-PA 5 MetaCyc: PWY-6527;KEGG: 00520+2.7.1.6;MetaCyc: PWY-3821;KEGG: 00052+2.7.1.6;MetaCyc: PWY-6317 "Stachyose degradation";"Amino sugar and nucleotide sugar metabolism";"D-galactose detoxification";"Galactose metabolism";"D-galactose degradation I (Leloir pathway)" CFLO000264-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO004305-PA 7 Reactome: R-HSA-6814122;Reactome: R-HSA-390471;Reactome: R-HSA-389957;Reactome: R-HSA-8950505;Reactome: R-HSA-389960;Reactome: R-HSA-5620922;Reactome: R-HSA-390450 "Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Association of TriC/CCT with target proteins during biosynthesis";"Prefoldin mediated transfer of substrate to CCT/TriC";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Formation of tubulin folding intermediates by CCT/TriC";"BBSome-mediated cargo-targeting to cilium";"Folding of actin by CCT/TriC" CFLO000592-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO002093-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" CFLO005798-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO012720-PA 3 Reactome: R-HSA-6807878;Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" CFLO007118-PA 32 Reactome: R-HSA-8851708;Reactome: R-HSA-75953;Reactome: R-HSA-674695;Reactome: R-HSA-167200;Reactome: R-HSA-168325;Reactome: R-HSA-6796648;Reactome: R-HSA-73779;Reactome: R-HSA-112382;Reactome: R-HSA-167242;Reactome: R-HSA-167152;Reactome: R-HSA-72203;Reactome: R-HSA-6807505;Reactome: R-HSA-72165;Reactome: R-HSA-167238;Reactome: R-HSA-167158;Reactome: R-HSA-73776;Reactome: R-HSA-167172;Reactome: R-HSA-6803529;Reactome: R-HSA-77075;Reactome: R-HSA-72086;Reactome: R-HSA-167160;Reactome: R-HSA-72163;Reactome: R-HSA-167290;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-167246;Reactome: R-HSA-167162;Reactome: R-HSA-75955;Reactome: R-HSA-167243;Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-9018519 "Signaling by FGFR2 IIIa TM";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II Pre-transcription Events";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Viral Messenger RNA Synthesis";"TP53 Regulates Transcription of DNA Repair Genes";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"Formation of RNA Pol II elongation complex";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat";"Processing of Capped Intron-Containing Pre-mRNA";"RNA polymerase II transcribes snRNA genes";"mRNA Splicing - Minor Pathway";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Promoter Escape";"Transcription of the HIV genome";"FGFR2 alternative splicing";"RNA Pol II CTD phosphorylation and interaction with CE";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"mRNA Splicing - Major Pathway";"Pausing and recovery of HIV elongation";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"Tat-mediated elongation of the HIV-1 transcript";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Elongation";"Tat-mediated HIV elongation arrest and recovery";"HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Estrogen-dependent gene expression" CFLO001083-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" CFLO006367-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO018354-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-204005 "RAB GEFs exchange GTP for GDP on RABs";"COPII-mediated vesicle transport" CFLO016492-PA 4 MetaCyc: PWY-5067;KEGG: 00500+2.4.1.18;MetaCyc: PWY-7900;MetaCyc: PWY-622 "Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Starch biosynthesis" CFLO000367-PA 1 Reactome: R-HSA-204005 "COPII-mediated vesicle transport" CFLO003951-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-6798695 "Fanconi Anemia Pathway";"Neutrophil degranulation" CFLO001260-PA 13 Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827 "Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO016978-PA 18 KEGG: 00591+3.1.1.4;KEGG: 00565+3.1.1.4;Reactome: R-HSA-1483166;Reactome: R-HSA-1482801;MetaCyc: PWY-7783;MetaCyc: PWY-7409;KEGG: 00590+3.1.1.4;MetaCyc: PWY-7416;KEGG: 00564+3.1.1.4;MetaCyc: PWY-6803;Reactome: R-HSA-1482788;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482839;MetaCyc: PWY-7417;Reactome: R-HSA-1482922;MetaCyc: PWY-8053;Reactome: R-HSA-1482925;MetaCyc: PWY-8051 "Linoleic acid metabolism";"Ether lipid metabolism";"Synthesis of PA";"Acyl chain remodelling of PS";"Plasmalogen degradation";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Arachidonic acid metabolism";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Glycerophospholipid metabolism";"Phosphatidylcholine acyl editing";"Acyl chain remodelling of PC";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PE";"Phospholipid remodeling (phosphatidate, yeast)";"Acyl chain remodelling of PI";"Anandamide biosynthesis II";"Acyl chain remodelling of PG";"Anandamide biosynthesis I" CFLO011963-PA 6 MetaCyc: PWY-5664;MetaCyc: PWY-5663;MetaCyc: PWY-7442;Reactome: R-HSA-1474151;MetaCyc: PWY-6983;KEGG: 00790+4.2.3.12 "Erythro-tetrahydrobiopterin biosynthesis II";"Erythro-tetrahydrobiopterin biosynthesis I";"Drosopterin and aurodrosopterin biosynthesis";"Tetrahydrobiopterin (BH4) synthesis, recycling, salvage and regulation";"Threo-tetrahydrobiopterin biosynthesis";"Folate biosynthesis" CFLO001998-PA 1 Reactome: R-HSA-9603798 "Class I peroxisomal membrane protein import" CFLO012308-PA 10 Reactome: R-HSA-611105;Reactome: R-HSA-2151201;Reactome: R-HSA-9627069;Reactome: R-HSA-5628897;Reactome: R-HSA-111458;Reactome: R-HSA-111464;Reactome: R-HSA-111459;Reactome: R-HSA-3299685;Reactome: R-HSA-111457;Reactome: R-HSA-111463 "Respiratory electron transport";"Transcriptional activation of mitochondrial biogenesis";"Regulation of the apoptosome activity";"TP53 Regulates Metabolic Genes";"Formation of apoptosome";"SMAC(DIABLO)-mediated dissociation of IAP:caspase complexes";"Activation of caspases through apoptosome-mediated cleavage";"Detoxification of Reactive Oxygen Species";"Release of apoptotic factors from the mitochondria";"SMAC (DIABLO) binds to IAPs" CFLO016304-PA 26 Reactome: R-HSA-8866907;Reactome: R-HSA-3899300;Reactome: R-HSA-2644606;Reactome: R-HSA-933541;Reactome: R-HSA-918233;Reactome: R-HSA-210744;Reactome: R-HSA-9018519;Reactome: R-HSA-400253;Reactome: R-HSA-9614657;Reactome: R-HSA-3214847;Reactome: R-HSA-1368082;Reactome: R-HSA-8941856;Reactome: R-HSA-1989781;Reactome: R-HSA-9013508;Reactome: R-HSA-2122947;Reactome: R-HSA-3134973;Reactome: R-HSA-9013695;Reactome: R-HSA-2894862;Reactome: R-HSA-1912408;Reactome: R-HSA-5621575;Reactome: R-HSA-5617472;Reactome: R-HSA-201722;Reactome: R-HSA-9617629;Reactome: R-HSA-3371568;Reactome: R-HSA-1234158;Reactome: R-HSA-381340 "Activation of the TFAP2 (AP-2) family of transcription factors";"SUMOylation of transcription cofactors";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"TRAF6 mediated IRF7 activation";"TRAF3-dependent IRF activation pathway";"Regulation of gene expression in late stage (branching morphogenesis) pancreatic bud precursor cells";"Estrogen-dependent gene expression";"Circadian Clock";"FOXO-mediated transcription of cell death genes";"HATs acetylate histones";"RORA activates gene expression";"RUNX3 regulates NOTCH signaling";"PPARA activates gene expression";"NOTCH3 Intracellular Domain Regulates Transcription";"NOTCH1 Intracellular Domain Regulates Transcription";"LRR FLII-interacting protein 1 (LRRFIP1) activates type I IFN production";"NOTCH4 Intracellular Domain Regulates Transcription";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Pre-NOTCH Transcription and Translation";"CD209 (DC-SIGN) signaling";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Formation of the beta-catenin:TCF transactivating complex";"Regulation of FOXO transcriptional activity by acetylation";"Attenuation phase";"Regulation of gene expression by Hypoxia-inducible Factor";"Transcriptional regulation of white adipocyte differentiation" CFLO001696-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO013822-PA 2 Reactome: R-HSA-189085;KEGG: 00500+3.2.1.28 "Digestion of dietary carbohydrate";"Starch and sucrose metabolism" CFLO006886-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO015870-PA 1 Reactome: R-HSA-162791 "Attachment of GPI anchor to uPAR" CFLO009899-PA 4 KEGG: 00260+4.2.1.22;KEGG: 00270+4.2.1.22;Reactome: R-HSA-1614603;MetaCyc: PWY-801 "Glycine, serine and threonine metabolism";"Cysteine and methionine metabolism";"Cysteine formation from homocysteine";"Homocysteine and cysteine interconversion" CFLO011344-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO000024-PA 2 KEGG: 00970+6.1.1.11;MetaCyc: PWY-6281 "Aminoacyl-tRNA biosynthesis";"L-selenocysteine biosynthesis II (archaea and eukaryotes)" CFLO001591-PA 1 Reactome: R-HSA-191859 "snRNP Assembly" CFLO004267-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO015167-PA 1 Reactome: R-HSA-70171 "Glycolysis" CFLO003429-PA 2 Reactome: R-HSA-204005;Reactome: R-HSA-8876198 "COPII-mediated vesicle transport";"RAB GEFs exchange GTP for GDP on RABs" CFLO004195-PA 2 KEGG: 00970+6.1.1.1;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation" CFLO015714-PA 2 Reactome: R-HSA-380270;Reactome: R-HSA-380320 "Recruitment of mitotic centrosome proteins and complexes";"Recruitment of NuMA to mitotic centrosomes" CFLO016911-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO005284-PA 1 Reactome: R-HSA-8955332 "Carboxyterminal post-translational modifications of tubulin" CFLO009850-PA 3 Reactome: R-HSA-110357;Reactome: R-HSA-110329;Reactome: R-HSA-110328 "Displacement of DNA glycosylase by APEX1";"Cleavage of the damaged pyrimidine";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine" CFLO005804-PA 16 Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Peptide chain elongation";"Translation initiation complex formation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO007807-PA 2 Reactome: R-HSA-69273;Reactome: R-HSA-8862803 "Cyclin A/B1/B2 associated events during G2/M transition";"Deregulated CDK5 triggers multiple neurodegenerative pathways in Alzheimer's disease models" CFLO017052-PA 1 Reactome: R-HSA-8854691 "Interleukin-20 family signaling" CFLO009681-PA 2 Reactome: R-HSA-8869496;Reactome: R-HSA-1268020 "TFAP2A acts as a transcriptional repressor during retinoic acid induced cell differentiation";"Mitochondrial protein import" CFLO007408-PA 42 Reactome: R-HSA-9609690;Reactome: R-HSA-171306;Reactome: R-HSA-2559586;Reactome: R-HSA-9018519;Reactome: R-HSA-9616222;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-427413;Reactome: R-HSA-5693571;Reactome: R-HSA-73772;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-2559580;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-73728;Reactome: R-HSA-606279;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-3214841;Reactome: R-HSA-201722;Reactome: R-HSA-5250924;Reactome: R-HSA-9610379;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847 "HCMV Early Events";"Packaging Of Telomere Ends";"DNA Damage/Telomere Stress Induced Senescence";"Estrogen-dependent gene expression";"Transcriptional regulation of granulopoiesis";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"NoRC negatively regulates rRNA expression";"Nonhomologous End-Joining (NHEJ)";"RNA Polymerase I Promoter Escape";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Oxidative Stress Induced Senescence";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"RNA Polymerase I Promoter Opening";"Deposition of new CENPA-containing nucleosomes at the centromere";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex";"B-WICH complex positively regulates rRNA expression";"HCMV Late Events";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones" CFLO008026-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO014542-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO003204-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO001842-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO014351-PA 2 Reactome: R-HSA-2151201;Reactome: R-HSA-400253 "Transcriptional activation of mitochondrial biogenesis";"Circadian Clock" CFLO014422-PA 14 MetaCyc: PWY-8051;MetaCyc: PWY-5981;MetaCyc: PWY-7589;MetaCyc: PWY-8053;MetaCyc: PWY-7411;KEGG: 00561+2.3.1.51;KEGG: 00564+2.3.1.51;MetaCyc: PWY-7417;Reactome: R-HSA-1483166;MetaCyc: PWY-7587;MetaCyc: PWY-7782;MetaCyc: PWY-5667;MetaCyc: PWY-6453;MetaCyc: PWY-8055 "Anandamide biosynthesis I";"CDP-diacylglycerol biosynthesis III";"Palmitoleate biosynthesis III (cyanobacteria)";"Anandamide biosynthesis II";"Phosphatidate biosynthesis (yeast)";"Glycerolipid metabolism";"Glycerophospholipid metabolism";"Phospholipid remodeling (phosphatidate, yeast)";"Synthesis of PA";"Oleate biosynthesis III (cyanobacteria)";"Plasmalogen biosynthesis";"CDP-diacylglycerol biosynthesis I";"Stigma estolide biosynthesis";"Palmitoyl ethanolamide biosynthesis" CFLO014413-PA 5 Reactome: R-HSA-450321;Reactome: R-HSA-2559580;KEGG: 04150+2.7.11.24;Reactome: R-HSA-450341;Reactome: R-HSA-2871796 "JNK (c-Jun kinases) phosphorylation and activation mediated by activated human TAK1";"Oxidative Stress Induced Senescence";"mTOR signaling pathway";"Activation of the AP-1 family of transcription factors";"FCERI mediated MAPK activation" CFLO004431-PA 1 Reactome: R-HSA-69231 "Cyclin D associated events in G1" CFLO011979-PA 2 MetaCyc: PWY-5905;Reactome: R-HSA-204626 "Hypusine biosynthesis";"Hypusine synthesis from eIF5A-lysine" CFLO008875-PA 4 KEGG: 00030+1.1.1.49;MetaCyc: PWY-7268;MetaCyc: PWY-8004;KEGG: 00480+1.1.1.49 "Pentose phosphate pathway";"NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)";"Entner-Doudoroff pathway I";"Glutathione metabolism" CFLO012808-PA 2 Reactome: R-HSA-5689880;Reactome: R-HSA-5689603 "Ub-specific processing proteases";"UCH proteinases" CFLO002165-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO013866-PA 10 Reactome: R-HSA-4719377;Reactome: R-HSA-913709;MetaCyc: PWY-7922;MetaCyc: PWY-7921;MetaCyc: PWY-7979;Reactome: R-HSA-4717374;MetaCyc: PWY-7661;KEGG: 00510+2.4.1.83;Reactome: R-HSA-4719360;Reactome: R-HSA-162699 "Defective DPM2 causes DPM2-CDG (CDG-1u)";"O-linked glycosylation of mucins";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"Protein O-mannosylation III (mammals, core M3)";"Defective DPM1 causes DPM1-CDG (CDG-1e)";"Protein N-glycosylation (Haloferax volcanii)";"N-Glycan biosynthesis";"Defective DPM3 causes DPM3-CDG (CDG-1o)";"Synthesis of dolichyl-phosphate mannose" CFLO003060-PA 2 Reactome: R-HSA-6787450;Reactome: R-HSA-6782315 "tRNA modification in the mitochondrion";"tRNA modification in the nucleus and cytosol" CFLO000133-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO016710-PA 1 Reactome: R-HSA-189451 "Heme biosynthesis" CFLO007707-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO010661-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO012130-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO002098-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO010303-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO012668-PA 2 Reactome: R-HSA-749476;Reactome: R-HSA-73980 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Termination" CFLO009775-PA 2 Reactome: R-HSA-196780;Reactome: R-HSA-3371599 "Biotin transport and metabolism";"Defective HLCS causes multiple carboxylase deficiency" CFLO006618-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO007257-PA 1 Reactome: R-HSA-427652 "Sodium-coupled phosphate cotransporters" CFLO011045-PA 4 KEGG: 00790+2.8.1.12;MetaCyc: PWY-7887;Reactome: R-HSA-947581;MetaCyc: PWY-6823 "Folate biosynthesis";"Protein SAMPylation and SAMP-mediated thiolation";"Molybdenum cofactor biosynthesis";"Molybdenum cofactor biosynthesis" CFLO009005-PA 1 KEGG: 00760+2.3.1.286 "Nicotinate and nicotinamide metabolism" CFLO012747-PA 27 Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-180746;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-5578749;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-3232142;Reactome: R-HSA-180910;Reactome: R-HSA-168333;Reactome: R-HSA-159230;Reactome: R-HSA-4615885;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-5619107 "ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Nuclear import of Rev protein";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Transcriptional regulation by small RNAs";"snRNP Assembly";"HCMV Late Events";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)" CFLO002737-PA 2 Reactome: R-HSA-168928;Reactome: R-HSA-70350 "DDX58/IFIH1-mediated induction of interferon-alpha/beta";"Fructose catabolism" CFLO005399-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO015982-PA 7 Reactome: R-HSA-389661;MetaCyc: PWY-5084;Reactome: R-HSA-71403;KEGG: 00020+2.3.1.61;KEGG: 00380+2.3.1.61;Reactome: R-HSA-71064;KEGG: 00310+2.3.1.61 "Glyoxylate metabolism and glycine degradation";"2-oxoglutarate decarboxylation to succinyl-CoA";"Citric acid cycle (TCA cycle)";"Citrate cycle (TCA cycle)";"Tryptophan metabolism";"Lysine catabolism";"Lysine degradation" CFLO006345-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO013518-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO007389-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO019081-PA 4 MetaCyc: PWY-7174;Reactome: R-HSA-1237112;MetaCyc: PWY-4361;KEGG: 00270+5.3.1.23 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II";"Methionine salvage pathway";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Cysteine and methionine metabolism" CFLO010946-PA 3 Reactome: R-HSA-6798695;Reactome: R-HSA-2206291;Reactome: R-HSA-2024096 "Neutrophil degranulation";"MPS IIIC - Sanfilippo syndrome C";"HS-GAG degradation" CFLO017035-PA 3 KEGG: 00195+7.1.2.2;KEGG: 00190+7.1.2.2;MetaCyc: PWY-7980 "Photosynthesis";"Oxidative phosphorylation";"ATP biosynthesis" CFLO008276-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO002955-PA 7 Reactome: R-HSA-2644606;Reactome: R-HSA-2122948;Reactome: R-HSA-2660826;Reactome: R-HSA-9013507;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-2691232 "Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants" CFLO013421-PA 4 KEGG: 00270+2.1.1.37;Reactome: R-HSA-4655427;Reactome: R-HSA-212300;Reactome: R-HSA-5334118 "Cysteine and methionine metabolism";"SUMOylation of DNA methylation proteins";"PRC2 methylates histones and DNA";"DNA methylation" CFLO007989-PA 5 Reactome: R-HSA-9646399;Reactome: R-HSA-5689877;Reactome: R-HSA-977225;Reactome: R-HSA-5205685;Reactome: R-HSA-983168 "Aggrephagy";"Josephin domain DUBs";"Amyloid fiber formation";"Pink/Parkin Mediated Mitophagy";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO005384-PA 15 Reactome: R-HSA-9665249;Reactome: R-HSA-9665233;Reactome: R-HSA-5637810;Reactome: R-HSA-9665251;Reactome: R-HSA-9634285;Reactome: R-HSA-9665245;Reactome: R-HSA-9665244;Reactome: R-HSA-9665247;Reactome: R-HSA-9652282;Reactome: R-HSA-8863795;Reactome: R-HSA-1227986;Reactome: R-HSA-1236382;Reactome: R-HSA-9665246;Reactome: R-HSA-9665250;Reactome: R-HSA-9664565 "Resistance of ERBB2 KD mutants to afatinib";"Resistance of ERBB2 KD mutants to trastuzumab";"Constitutive Signaling by EGFRvIII";"Resistance of ERBB2 KD mutants to lapatinib";"Constitutive Signaling by Overexpressed ERBB2";"Resistance of ERBB2 KD mutants to tesevatinib";"Resistance of ERBB2 KD mutants to sapitinib";"Resistance of ERBB2 KD mutants to osimertinib";"Drug-mediated inhibition of ERBB2 signaling";"Downregulation of ERBB2 signaling";"Signaling by ERBB2";"Constitutive Signaling by Ligand-Responsive EGFR Cancer Variants";"Resistance of ERBB2 KD mutants to neratinib";"Resistance of ERBB2 KD mutants to AEE788";"Signaling by ERBB2 KD Mutants" CFLO006285-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO015005-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" CFLO013864-PA 4 Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-167160;MetaCyc: PWY-7375 "mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Mrna capping I" CFLO011221-PA 19 Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-8876725;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-6790901;Reactome: R-HSA-3214858;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827 "Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Protein methylation";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"rRNA modification in the nucleus and cytosol";"RMTs methylate histone arginines";"Translation initiation complex formation";"Peptide chain elongation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO011315-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" CFLO009857-PA 7 Reactome: R-HSA-5083633;Reactome: R-HSA-5083629;Reactome: R-HSA-3000171;Reactome: R-HSA-3000178;Reactome: R-HSA-5083628;Reactome: R-HSA-5173105;Reactome: R-HSA-9010553 "Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Non-integrin membrane-ECM interactions";"ECM proteoglycans";"Defective POMGNT1 causes MDDGA3, MDDGB3 and MDDGC3";"O-linked glycosylation";"Regulation of expression of SLITs and ROBOs" CFLO014819-PA 57 Reactome: R-HSA-5610783;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5676590;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-2467813;Reactome: R-HSA-5607761;Reactome: R-HSA-68949;Reactome: R-HSA-8941858;Reactome: R-HSA-195253;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-5668541;Reactome: R-HSA-187577;Reactome: R-HSA-69017;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-174084;Reactome: R-HSA-5632684;Reactome: R-HSA-8854050;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69601;Reactome: R-HSA-174154;Reactome: R-HSA-69481;Reactome: R-HSA-202424;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-450408;Reactome: R-HSA-174178;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-350562;Reactome: R-HSA-8939902;Reactome: R-HSA-1236978;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1169091;Reactome: R-HSA-382556;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-5610780;Reactome: R-HSA-8939236;Reactome: R-HSA-6798695;Reactome: R-HSA-4641257;Reactome: R-HSA-180585;Reactome: R-HSA-5610785 "Degradation of GLI2 by the proteasome";"Asymmetric localization of PCP proteins";"Neddylation";"NIK-->noncanonical NF-kB signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Separation of Sister Chromatids";"Dectin-1 mediated noncanonical NF-kB signaling";"Orc1 removal from chromatin";"Regulation of RUNX3 expression and activity";"Degradation of beta-catenin by the destruction complex";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"TNFR2 non-canonical NF-kB pathway";"SCF(Skp2)-mediated degradation of p27/p21";"CDK-mediated phosphorylation and removal of Cdc6";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"Autodegradation of Cdh1 by Cdh1:APC/C";"Hedgehog 'on' state";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Degradation of DVL";"MAPK6/MAPK4 signaling";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"APC/C:Cdc20 mediated degradation of Securin";"G2/M Checkpoints";"Downstream TCR signaling";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of RUNX2 expression and activity";"Cross-presentation of soluble exogenous antigens (endosomes)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Activation of NF-kappaB in B cells";"ABC-family proteins mediated transport";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Degradation of GLI1 by the proteasome";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Neutrophil degranulation";"Degradation of AXIN";"Vif-mediated degradation of APOBEC3G";"GLI3 is processed to GLI3R by the proteasome" CFLO004313-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" CFLO000050-PA 1 Reactome: R-HSA-426117 "Cation-coupled Chloride cotransporters" CFLO000558-PA 7 Reactome: R-HSA-1834949;Reactome: R-HSA-749476;Reactome: R-HSA-76071;Reactome: R-HSA-73980;Reactome: R-HSA-76061;Reactome: R-HSA-76066;Reactome: R-HSA-73780 "Cytosolic sensors of pathogen-associated DNA";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Transcription Termination";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter";"RNA Polymerase III Chain Elongation" CFLO010912-PA 1 Reactome: R-HSA-429947 "Deadenylation of mRNA" CFLO019662-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO013701-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO012695-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO002859-PA 1 Reactome: R-HSA-433137 "Sodium-coupled sulphate, di- and tri-carboxylate transporters" CFLO008263-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706 "Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Peptide chain elongation";"Translation initiation complex formation";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO013592-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" CFLO005926-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO005150-PA 13 Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956 "SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO012174-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO007889-PA 1 Reactome: R-HSA-442660 "Na+/Cl- dependent neurotransmitter transporters" CFLO014345-PA 2 Reactome: R-HSA-8856828;Reactome: R-HSA-8856825 "Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis" CFLO002975-PA 4 Reactome: R-HSA-112308;Reactome: R-HSA-5576892;Reactome: R-HSA-5576893;Reactome: R-HSA-419037 "Presynaptic depolarization and calcium channel opening";"Phase 0 - rapid depolarisation";"Phase 2 - plateau phase";"NCAM1 interactions" CFLO001694-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO002869-PA 1 Reactome: R-HSA-389957 "Prefoldin mediated transfer of substrate to CCT/TriC" CFLO001592-PA 14 Reactome: R-HSA-3769402;Reactome: R-HSA-9648025;Reactome: R-HSA-168333;Reactome: R-HSA-165054;Reactome: R-HSA-69273;Reactome: R-HSA-5687128;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-2173788;Reactome: R-HSA-2500257;Reactome: R-HSA-68877;Reactome: R-HSA-9634638;Reactome: R-HSA-5663220;Reactome: R-HSA-450520 "Deactivation of the beta-catenin transactivating complex";"EML4 and NUDC in mitotic spindle formation";"NEP/NS2 Interacts with the Cellular Export Machinery";"Rev-mediated nuclear export of HIV RNA";"Cyclin A/B1/B2 associated events during G2/M transition";"MAPK6/MAPK4 signaling";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Downregulation of TGF-beta receptor signaling";"Resolution of Sister Chromatid Cohesion";"Mitotic Prometaphase";"Estrogen-dependent nuclear events downstream of ESR-membrane signaling";"RHO GTPases Activate Formins";"HuR (ELAVL1) binds and stabilizes mRNA" CFLO005056-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO007384-PA 8 Reactome: R-HSA-77387;Reactome: R-HSA-917977;KEGG: 00190+7.1.2.2;KEGG: 00195+7.1.2.2;Reactome: R-HSA-9639288;Reactome: R-HSA-1222556;MetaCyc: PWY-7980;Reactome: R-HSA-983712 "Insulin receptor recycling";"Transferrin endocytosis and recycling";"Oxidative phosphorylation";"Photosynthesis";"Amino acids regulate mTORC1";"ROS and RNS production in phagocytes";"ATP biosynthesis";"Ion channel transport" CFLO001382-PA 3 Reactome: R-HSA-1362409;KEGG: 00860+1.16.3.1;Reactome: R-HSA-1268020 "Mitochondrial iron-sulfur cluster biogenesis";"Porphyrin and chlorophyll metabolism";"Mitochondrial protein import" CFLO004893-PA 4 Reactome: R-HSA-8856825;Reactome: R-HSA-8951664;Reactome: R-HSA-6781823;Reactome: R-HSA-5696394 "Cargo recognition for clathrin-mediated endocytosis";"Neddylation";"Formation of TC-NER Pre-Incision Complex";"DNA Damage Recognition in GG-NER" CFLO005749-PA 4 KEGG: 00260+1.2.1.8+1.1.99.1;MetaCyc: PWY-7494;Reactome: R-HSA-6798163;MetaCyc: PWY-3722 "Glycine, serine and threonine metabolism";"Choline degradation IV";"Choline catabolism";"Glycine betaine biosynthesis II (Gram-positive bacteria)" CFLO005799-PA 4 Reactome: R-HSA-112382;Reactome: R-HSA-674695;Reactome: R-HSA-8866654;Reactome: R-HSA-75955 "Formation of RNA Pol II elongation complex";"RNA Polymerase II Pre-transcription Events";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Transcription Elongation" CFLO004019-PA 3 Reactome: R-HSA-6811434;Reactome: R-HSA-983189;Reactome: R-HSA-2132295 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins";"MHC class II antigen presentation" CFLO012097-PA 11 KEGG: 05163+2.7.11.1;Reactome: R-HSA-163680;Reactome: R-HSA-380972;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;Reactome: R-HSA-6804756;KEGG: 05170+2.7.11.1;KEGG: 04150+2.7.11.1;Reactome: R-HSA-9614657;KEGG: 04926+2.7.11.1;KEGG: 04714+2.7.11.1 "Human cytomegalovirus infection";"AMPK inhibits chREBP transcriptional activation activity";"Energy dependent regulation of mTOR by LKB1-AMPK";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Regulation of TP53 Activity through Phosphorylation";"Human immunodeficiency virus 1 infection";"mTOR signaling pathway";"FOXO-mediated transcription of cell death genes";"Relaxin signaling pathway";"Thermogenesis" CFLO009087-PA 30 Reactome: R-HSA-167152;Reactome: R-HSA-73762;Reactome: R-HSA-73779;Reactome: R-HSA-6796648;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-167246;Reactome: R-HSA-112382;Reactome: R-HSA-167200;Reactome: R-HSA-5696400;Reactome: R-HSA-674695;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-72086;Reactome: R-HSA-77075;Reactome: R-HSA-75953;Reactome: R-HSA-167160;Reactome: R-HSA-6781827;Reactome: R-HSA-6782210;Reactome: R-HSA-5696395;Reactome: R-HSA-113418;Reactome: R-HSA-73776;Reactome: R-HSA-167158;Reactome: R-HSA-427413;Reactome: R-HSA-167172;Reactome: R-HSA-75955;Reactome: R-HSA-73863;Reactome: R-HSA-73772;Reactome: R-HSA-167162;Reactome: R-HSA-2564830 "Formation of HIV elongation complex in the absence of HIV Tat";"RNA Polymerase I Transcription Initiation";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"TP53 Regulates Transcription of DNA Repair Genes";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"Tat-mediated elongation of the HIV-1 transcript";"Formation of RNA Pol II elongation complex";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"Dual Incision in GG-NER";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"mRNA Capping";"RNA Pol II CTD phosphorylation and interaction with CE";"RNA Polymerase II Transcription Initiation";"RNA Pol II CTD phosphorylation and interaction with CE during HIV infection";"Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Gap-filling DNA repair synthesis and ligation in TC-NER";"Formation of Incision Complex in GG-NER";"Formation of the Early Elongation Complex";"RNA Polymerase II Promoter Escape";"Formation of the HIV-1 Early Elongation Complex";"NoRC negatively regulates rRNA expression";"Transcription of the HIV genome";"RNA Polymerase II Transcription Elongation";"RNA Polymerase I Transcription Termination";"RNA Polymerase I Promoter Escape";"RNA Polymerase II HIV Promoter Escape";"Cytosolic iron-sulfur cluster assembly" CFLO004716-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO006634-PA 4 Reactome: R-HSA-947581;KEGG: 00730+2.8.1.7;MetaCyc: PWY-7250;Reactome: R-HSA-1362409 "Molybdenum cofactor biosynthesis";"Thiamine metabolism";"[2Fe-2S] iron-sulfur cluster biosynthesis";"Mitochondrial iron-sulfur cluster biogenesis" CFLO009453-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO009698-PA 11 Reactome: R-HSA-6785631;Reactome: R-HSA-5673001;Reactome: R-HSA-8847993;Reactome: R-HSA-9664565;Reactome: R-HSA-1250196;Reactome: R-HSA-1227986;Reactome: R-HSA-8863795;Reactome: R-HSA-1257604;Reactome: R-HSA-1963642;Reactome: R-HSA-2219530;Reactome: R-HSA-6811558 "ERBB2 Regulates Cell Motility";"RAF/MAP kinase cascade";"ERBB2 Activates PTK6 Signaling";"Signaling by ERBB2 KD Mutants";"SHC1 events in ERBB2 signaling";"Signaling by ERBB2";"Downregulation of ERBB2 signaling";"PIP3 activates AKT signaling";"PI3K events in ERBB2 signaling";"Constitutive Signaling by Aberrant PI3K in Cancer";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling" CFLO019454-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Relaxin signaling pathway";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Human papillomavirus infection";"Thermogenesis";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO002568-PA 13 Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-975956 "Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)" CFLO007201-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO000511-PA 3 KEGG: 00970+6.1.1.4;Reactome: R-HSA-379716;Reactome: R-HSA-2408522 "Aminoacyl-tRNA biosynthesis";"Cytosolic tRNA aminoacylation";"Selenoamino acid metabolism" CFLO002418-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO007222-PA 7 MetaCyc: PWY-7511;Reactome: R-HSA-2894862;Reactome: R-HSA-2691232;Reactome: R-HSA-2122948;Reactome: R-HSA-2644606;Reactome: R-HSA-9013507;Reactome: R-HSA-2979096 "Protein ubiquitination";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus" CFLO001100-PA 1 Reactome: R-HSA-5620922 "BBSome-mediated cargo-targeting to cilium" CFLO005678-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO008846-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO018213-PA 5 Reactome: R-HSA-6811438;Reactome: R-HSA-204005;Reactome: R-HSA-6811434;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440 "Intra-Golgi traffic";"COPII-mediated vesicle transport";"COPI-dependent Golgi-to-ER retrograde traffic";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network" CFLO013638-PA 20 MetaCyc: PWY-7726;MetaCyc: PWY-7291;MetaCyc: PWY-7007;KEGG: 00592+1.3.3.6;MetaCyc: PWY-7574;MetaCyc: PWY-7340;KEGG: 00640+1.3.3.6;MetaCyc: PWY-7854;KEGG: 00410+1.3.3.6;MetaCyc: PWY-735;MetaCyc: PWY-7338;MetaCyc: PWY-6920;MetaCyc: PWY-7606;MetaCyc: PWY-7337;MetaCyc: PWY-7288;Reactome: R-HSA-9033241;MetaCyc: PWY-5136;KEGG: 00071+1.3.3.6;MetaCyc: PWY-6837;MetaCyc: PWY-7858 "(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Oleate beta-oxidation (isomerase-dependent, yeast)";"Methyl ketone biosynthesis (engineered)";"alpha-Linolenic acid metabolism";"Propanoyl-coa degradation II";"9-cis, 11-trans-octadecadienoyl-CoA degradation (isomerase-dependent, yeast)";"Propanoate metabolism";"Crotonyl-coa/ethylmalonyl-coa/hydroxybutyryl-coa cycle (engineered)";"beta-Alanine metabolism";"Jasmonic acid biosynthesis";"10-trans-heptadecenoyl-CoA degradation (reductase-dependent, yeast)";"6-gingerol analog biosynthesis (engineered)";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"10-cis-heptadecenoyl-CoA degradation (yeast)";"Fatty acid beta-oxidation VII (yeast peroxisome)";"Peroxisomal protein import";"Fatty acid beta-oxidation II (plant peroxisome)";"Fatty acid degradation";"Fatty acid beta-oxidation V (unsaturated, odd number, di-isomerase-dependent)";"(5Z)-dodecenoate biosynthesis II" CFLO006286-PA 1 Reactome: R-HSA-446193 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO004692-PA 3 Reactome: R-HSA-379726;Reactome: R-HSA-379716;KEGG: 00970+6.1.1.14 "Mitochondrial tRNA aminoacylation";"Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" CFLO017440-PA 2 Reactome: R-HSA-5578775;Reactome: R-HSA-2672351 "Ion homeostasis";"Stimuli-sensing channels" CFLO013290-PA 4 Reactome: R-HSA-351202;KEGG: 00270+2.5.1.16;KEGG: 00330+2.5.1.16;KEGG: 00480+2.5.1.16 "Metabolism of polyamines";"Cysteine and methionine metabolism";"Arginine and proline metabolism";"Glutathione metabolism" CFLO018531-PA 4 Reactome: R-HSA-5205685;Reactome: R-HSA-8934903;Reactome: R-HSA-936440;Reactome: R-HSA-1632852 "Pink/Parkin Mediated Mitophagy";"Receptor Mediated Mitophagy";"Negative regulators of DDX58/IFIH1 signaling";"Macroautophagy" CFLO019399-PA 7 KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04926+2.7.11.1 "Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection";"Human papillomavirus infection";"Thermogenesis";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Relaxin signaling pathway" CFLO006482-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO005922-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO001538-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO000657-PA 4 KEGG: 00970+6.1.1.10;Reactome: R-HSA-2408522;KEGG: 00450+6.1.1.10;Reactome: R-HSA-379716 "Aminoacyl-tRNA biosynthesis";"Selenoamino acid metabolism";"Selenocompound metabolism";"Cytosolic tRNA aminoacylation" CFLO017126-PA 1 Reactome: R-HSA-432047 "Passive transport by Aquaporins" CFLO008033-PA 1 Reactome: R-HSA-72165 "mRNA Splicing - Minor Pathway" CFLO005476-PA 4 MetaCyc: PWY-7219;Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3;KEGG: 00230+2.7.4.3 "Adenosine ribonucleotides de novo biosynthesis";"Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism";"Purine metabolism" CFLO010334-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO004073-PA 7 KEGG: 00983+1.1.1.205;MetaCyc: PWY-6596;Reactome: R-HSA-6798695;MetaCyc: PWY-5695;MetaCyc: PWY-7221;KEGG: 00230+1.1.1.205;Reactome: R-HSA-73817 "Drug metabolism - other enzymes";"Adenosine nucleotides degradation I";"Neutrophil degranulation";"Inosine 5'-phosphate degradation";"Guanosine ribonucleotides de novo biosynthesis";"Purine metabolism";"Purine ribonucleoside monophosphate biosynthesis" CFLO011906-PA 4 Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72764;Reactome: R-HSA-975957 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Eukaryotic Translation Termination";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)" CFLO008825-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO004922-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO004583-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-6783310 "Protein ubiquitination";"Fanconi Anemia Pathway" CFLO002686-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO016805-PA 1 Reactome: R-HSA-5389840 "Mitochondrial translation elongation" CFLO004813-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO009367-PA 4 MetaCyc: PWY-4361;KEGG: 00270+5.3.1.23;Reactome: R-HSA-72731;MetaCyc: PWY-7174 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Cysteine and methionine metabolism";"Recycling of eIF2:GDP";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II" CFLO003223-PA 2 Reactome: R-HSA-375280;Reactome: R-HSA-416476 "Amine ligand-binding receptors";"G alpha (q) signalling events" CFLO008726-PA 13 MetaCyc: PWY-5690;KEGG: 00640+6.2.1.5;MetaCyc: PWY-5913;KEGG: 00020+6.2.1.5;MetaCyc: PWY-5537;MetaCyc: PWY-6969;Reactome: R-HSA-71403;MetaCyc: PWY-5392;KEGG: 00660+6.2.1.5;MetaCyc: PWY-6728;MetaCyc: PWY-7384;KEGG: 00720+6.2.1.5;MetaCyc: PWY-5538 "TCA cycle II (plants and fungi)";"Propanoate metabolism";"Partial TCA cycle (obligate autotrophs)";"Citrate cycle (TCA cycle)";"Pyruvate fermentation to acetate V";"TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)";"Citric acid cycle (TCA cycle)";"Reductive TCA cycle II";"C5-Branched dibasic acid metabolism";"Methylaspartate cycle";"Anaerobic energy metabolism (invertebrates, mitochondrial)";"Carbon fixation pathways in prokaryotes";"Pyruvate fermentation to acetate VI" CFLO014432-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO000600-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO013401-PA 6 MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7656;MetaCyc: PWY-5884;MetaCyc: PWY-6733;Reactome: R-HSA-9640463 "Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Wax biosynthesis" CFLO016628-PA 12 KEGG: 00680+6.2.1.1;MetaCyc: PWY-7118;MetaCyc: PWY-5133;MetaCyc: PWY-5132;KEGG: 00620+6.2.1.1;MetaCyc: PWY-7857;KEGG: 00010+6.2.1.1;KEGG: 00640+6.2.1.1;KEGG: 00630+6.2.1.1;MetaCyc: PWY-6672;KEGG: 00720+6.2.1.1;MetaCyc: PWY-5108 "Methane metabolism";"Chitin degradation to ethanol";"Colupulone and cohumulone biosynthesis";"Lupulone and humulone biosynthesis";"Pyruvate metabolism";"Adlupulone and adhumulone biosynthesis";"Glycolysis / Gluconeogenesis";"Propanoate metabolism";"Glyoxylate and dicarboxylate metabolism";"Cis-genanyl-coa degradation";"Carbon fixation pathways in prokaryotes";"L-isoleucine biosynthesis V" CFLO000570-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO004342-PA 8 Reactome: R-HSA-3928665;Reactome: R-HSA-5140745;Reactome: R-HSA-190873;Reactome: R-HSA-196025;Reactome: R-HSA-8856825;Reactome: R-HSA-5099900;Reactome: R-HSA-8856828;Reactome: R-HSA-432720 "EPH-ephrin mediated repulsion of cells";"WNT5A-dependent internalization of FZD2, FZD5 and ROR2";"Gap junction degradation";"Formation of annular gap junctions";"Cargo recognition for clathrin-mediated endocytosis";"WNT5A-dependent internalization of FZD4";"Clathrin-mediated endocytosis";"Lysosome Vesicle Biogenesis" CFLO007874-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO003097-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO005157-PA 8 Reactome: R-HSA-5620912;Reactome: R-HSA-2565942;Reactome: R-HSA-380320;Reactome: R-HSA-380270;Reactome: R-HSA-380259;Reactome: R-HSA-6804115;Reactome: R-HSA-380284;Reactome: R-HSA-8854518 "Anchoring of the basal body to the plasma membrane";"Regulation of PLK1 Activity at G2/M Transition";"Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes";"Loss of Nlp from mitotic centrosomes";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Loss of proteins required for interphase microtubule organization from the centrosome";"AURKA Activation by TPX2" CFLO001686-PA 1 Reactome: R-HSA-71288 "Creatine metabolism" CFLO015968-PA 1 Reactome: R-HSA-6807505 "RNA polymerase II transcribes snRNA genes" CFLO016962-PA 5 Reactome: R-HSA-6781827;Reactome: R-HSA-6782135;Reactome: R-HSA-6781823;Reactome: R-HSA-72163;Reactome: R-HSA-6782210 "Transcription-Coupled Nucleotide Excision Repair (TC-NER)";"Dual incision in TC-NER";"Formation of TC-NER Pre-Incision Complex";"mRNA Splicing - Major Pathway";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO008202-PA 5 MetaCyc: PWY-7766;MetaCyc: PWY-5531;MetaCyc: PWY-7159;Reactome: R-HSA-189451;KEGG: 00860+4.1.1.37 "Heme b biosynthesis IV (Gram-positive bacteria)";"3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic)";"3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent)";"Heme biosynthesis";"Porphyrin and chlorophyll metabolism" CFLO012554-PA 2 Reactome: R-HSA-71403;Reactome: R-HSA-611105 "Citric acid cycle (TCA cycle)";"Respiratory electron transport" CFLO018539-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-8849473 "Major pathway of rRNA processing in the nucleolus and cytosol";"PTK6 Expression" CFLO007632-PA 11 KEGG: 00630+6.3.1.2;Reactome: R-HSA-210455;KEGG: 00220+6.3.1.2;MetaCyc: PWY-6549;KEGG: 00250+6.3.1.2;MetaCyc: PWY-6964;MetaCyc: PWY-381;KEGG: 00910+6.3.1.2;MetaCyc: PWY-5675;Reactome: R-HSA-8964539;MetaCyc: PWY-6963 "Glyoxylate and dicarboxylate metabolism";"Astrocytic Glutamate-Glutamine Uptake And Metabolism";"Arginine biosynthesis";"L-glutamine biosynthesis III";"Alanine, aspartate and glutamate metabolism";"Ammonia assimilation cycle II";"Nitrate reduction II (assimilatory)";"Nitrogen metabolism";"Nitrate reduction V (assimilatory)";"Glutamate and glutamine metabolism";"Ammonia assimilation cycle I" CFLO019774-PA 1 Reactome: R-HSA-163560 "Triglyceride catabolism" CFLO007195-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO011386-PA 1 Reactome: R-HSA-446203 "Asparagine N-linked glycosylation" CFLO011230-PA 2 Reactome: R-HSA-389661;Reactome: R-HSA-9033241 "Glyoxylate metabolism and glycine degradation";"Peroxisomal protein import" CFLO006172-PA 1 Reactome: R-HSA-110362 "POLB-Dependent Long Patch Base Excision Repair" CFLO006677-PA 1 Reactome: R-HSA-5223345 "Miscellaneous transport and binding events" CFLO006756-PA 1 Reactome: R-HSA-6811438 "Intra-Golgi traffic" CFLO009640-PA 3 Reactome: R-HSA-6782315;MetaCyc: PWY-6829;MetaCyc: PWY-7888 "tRNA modification in the nucleus and cytosol";"Trna methylation (yeast)";"Trna-uridine 2-thiolation (cytoplasmic)" CFLO001551-PA 2 Reactome: R-HSA-5576893;Reactome: R-HSA-5576892 "Phase 2 - plateau phase";"Phase 0 - rapid depolarisation" CFLO008552-PA 1 Reactome: R-HSA-71384 "Ethanol oxidation" CFLO005850-PA 1 Reactome: R-HSA-8854691 "Interleukin-20 family signaling" CFLO007791-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" CFLO017923-PA 1 Reactome: R-HSA-8876725 "Protein methylation" CFLO010048-PA 2 Reactome: R-HSA-6804115;Reactome: R-HSA-429947 "TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain";"Deadenylation of mRNA" CFLO011231-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO012350-PA 2 Reactome: R-HSA-5083635;Reactome: R-HSA-5173214 "Defective B3GALTL causes Peters-plus syndrome (PpS)";"O-glycosylation of TSR domain-containing proteins" CFLO001018-PA 5 KEGG: 00260+2.3.1.37;KEGG: 00860+2.3.1.37;MetaCyc: PWY-7536;MetaCyc: PWY-5189;Reactome: R-HSA-189451 "Glycine, serine and threonine metabolism";"Porphyrin and chlorophyll metabolism";"2-amino-3-hydroxycyclopent-2-enone biosynthesis";"Tetrapyrrole biosynthesis II (from glycine)";"Heme biosynthesis" CFLO003967-PA 15 MetaCyc: PWY-2221;Reactome: R-HSA-70171;MetaCyc: PWY-5723;MetaCyc: PWY-6901;KEGG: 00620+2.7.1.40;MetaCyc: PWY-8004;MetaCyc: PWY-6886;MetaCyc: PWY-5484;KEGG: 00010+2.7.1.40;KEGG: 00230+2.7.1.40;MetaCyc: PWY-6142;MetaCyc: PWY-7003;MetaCyc: PWY-7218;MetaCyc: PWY-7383;MetaCyc: PWY-1042 "Entner-Doudoroff pathway III (semi-phosphorylative)";"Glycolysis";"Rubisco shunt";"Superpathway of glucose and xylose degradation";"Pyruvate metabolism";"Entner-Doudoroff pathway I";"1-butanol autotrophic biosynthesis (engineered)";"Glycolysis II (from fructose 6-phosphate)";"Glycolysis / Gluconeogenesis";"Purine metabolism";"Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycerol degradation to butanol";"Photosynthetic 3-hydroxybutanoate biosynthesis (engineered)";"Anaerobic energy metabolism (invertebrates, cytosol)";"Glycolysis IV (plant cytosol)" CFLO007730-PA 12 Reactome: R-HSA-8854518;Reactome: R-HSA-3371497;Reactome: R-HSA-380284;Reactome: R-HSA-380259;Reactome: R-HSA-6811436;Reactome: R-HSA-380270;Reactome: R-HSA-2565942;Reactome: R-HSA-5620912;Reactome: R-HSA-2132295;Reactome: R-HSA-380320;Reactome: R-HSA-381038;Reactome: R-HSA-6807878 "AURKA Activation by TPX2";"HSP90 chaperone cycle for steroid hormone receptors (SHR)";"Loss of proteins required for interphase microtubule organization from the centrosome";"Loss of Nlp from mitotic centrosomes";"COPI-independent Golgi-to-ER retrograde traffic";"Recruitment of mitotic centrosome proteins and complexes";"Regulation of PLK1 Activity at G2/M Transition";"Anchoring of the basal body to the plasma membrane";"MHC class II antigen presentation";"Recruitment of NuMA to mitotic centrosomes";"XBP1(S) activates chaperone genes";"COPI-mediated anterograde transport" CFLO012705-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO005072-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-6796648 "Fanconi Anemia Pathway";"TP53 Regulates Transcription of DNA Repair Genes" CFLO000632-PA 1 Reactome: R-HSA-6782315 "tRNA modification in the nucleus and cytosol" CFLO013851-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO018543-PA 1 Reactome: R-HSA-71403 "Citric acid cycle (TCA cycle)" CFLO006758-PA 2 Reactome: R-HSA-390471;Reactome: R-HSA-429958 "Association of TriC/CCT with target proteins during biosynthesis";"mRNA decay by 3' to 5' exoribonuclease" CFLO009645-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO001486-PA 8 MetaCyc: PWY-7922;MetaCyc: PWY-7921;Reactome: R-HSA-5083629;MetaCyc: PWY-7979;Reactome: R-HSA-5083633;KEGG: 00515+2.4.1.109;KEGG: 00514+2.4.1.109;Reactome: R-HSA-5173105 "Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"Defective POMT2 causes MDDGA2, MDDGB2 and MDDGC2";"Protein O-mannosylation III (mammals, core M3)";"Defective POMT1 causes MDDGA1, MDDGB1 and MDDGC1";"Mannose type O-glycan biosynthesis";"Other types of O-glycan biosynthesis";"O-linked glycosylation" CFLO003230-PA 1 Reactome: R-HSA-913709 "O-linked glycosylation of mucins" CFLO001441-PA 2 Reactome: R-HSA-6807505;Reactome: R-HSA-191859 "RNA polymerase II transcribes snRNA genes";"snRNP Assembly" CFLO007288-PA 2 Reactome: R-HSA-445355;Reactome: R-HSA-390522 "Smooth Muscle Contraction";"Striated Muscle Contraction" CFLO009873-PA 1 KEGG: 00970+6.1.1.16 "Aminoacyl-tRNA biosynthesis" CFLO012309-PA 1 Reactome: R-HSA-912446 "Meiotic recombination" CFLO010049-PA 2 KEGG: 00670+2.1.2.10;KEGG: 00260+2.1.2.10 "One carbon pool by folate";"Glycine, serine and threonine metabolism" CFLO013139-PA 1 KEGG: 00970+6.3.5.7 "Aminoacyl-tRNA biosynthesis" CFLO010240-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226 "Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol" CFLO015680-PA 15 Reactome: R-HSA-6804756;Reactome: R-HSA-69473;Reactome: R-HSA-5685939;Reactome: R-HSA-5693571;Reactome: R-HSA-5693548;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-912446;Reactome: R-HSA-5693607;Reactome: R-HSA-5693568;Reactome: R-HSA-5693565;Reactome: R-HSA-5685942;Reactome: R-HSA-2559586;Reactome: R-HSA-5685938;Reactome: R-HSA-5693579 "Regulation of TP53 Activity through Phosphorylation";"G2/M DNA damage checkpoint";"HDR through MMEJ (alt-NHEJ)";"Nonhomologous End-Joining (NHEJ)";"Sensing of DNA Double Strand Breaks";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Meiotic recombination";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"HDR through Homologous Recombination (HRR)";"DNA Damage/Telomere Stress Induced Senescence";"HDR through Single Strand Annealing (SSA)";"Homologous DNA Pairing and Strand Exchange" CFLO010189-PA 1 Reactome: R-HSA-373753 "Nephrin family interactions" CFLO006584-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO007205-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-5884;MetaCyc: PWY-7656;MetaCyc: PWY-6733;MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84 "Wax biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis";"Sporopollenin precursors biosynthesis";"Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis" CFLO005695-PA 4 MetaCyc: PWY-5874;KEGG: 00860+1.14.14.18;Reactome: R-HSA-189483;Reactome: R-HSA-917937 "Heme degradation I";"Porphyrin and chlorophyll metabolism";"Heme degradation";"Iron uptake and transport" CFLO007748-PA 1 MetaCyc: PWY-7799 "Arg/N-end rule pathway (eukaryotic)" CFLO016563-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO004795-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO000491-PA 2 KEGG: 00500+3.2.1.4;MetaCyc: PWY-6788 "Starch and sucrose metabolism";"Cellulose degradation II (fungi)" CFLO008228-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Selenocysteine synthesis";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO008046-PA 2 Reactome: R-HSA-168138;Reactome: R-HSA-983231 "Toll Like Receptor 9 (TLR9) Cascade";"Factors involved in megakaryocyte development and platelet production" CFLO012800-PA 14 Reactome: R-HSA-1912408;Reactome: R-HSA-8948700;Reactome: R-HSA-5628897;Reactome: R-HSA-203927;Reactome: R-HSA-4086398;Reactome: R-HSA-426486;Reactome: R-HSA-8934593;Reactome: R-HSA-5687128;Reactome: R-HSA-8943723;Reactome: R-HSA-9018519;Reactome: R-HSA-8986944;Reactome: R-HSA-426496;Reactome: R-HSA-9029569;Reactome: R-HSA-9022692 "Pre-NOTCH Transcription and Translation";"Competing endogenous RNAs (ceRNAs) regulate PTEN translation";"TP53 Regulates Metabolic Genes";"MicroRNA (miRNA) biogenesis";"Ca2+ pathway";"Small interfering RNA (siRNA) biogenesis";"Regulation of RUNX1 Expression and Activity";"MAPK6/MAPK4 signaling";"Regulation of PTEN mRNA translation";"Estrogen-dependent gene expression";"Transcriptional Regulation by MECP2";"Post-transcriptional silencing by small RNAs";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux";"Regulation of MECP2 expression and activity" CFLO013492-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO004441-PA 13 Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012 "L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency" CFLO004896-PA 2 Reactome: R-HSA-5678895;Reactome: R-HSA-382556 "Defective CFTR causes cystic fibrosis";"ABC-family proteins mediated transport" CFLO004181-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902 "Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation" CFLO000982-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO013088-PA 6 Reactome: R-HSA-2500257;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-5663220;Reactome: R-HSA-9648025;Reactome: R-HSA-68877 "Resolution of Sister Chromatid Cohesion";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"RHO GTPases Activate Formins";"EML4 and NUDC in mitotic spindle formation";"Mitotic Prometaphase" CFLO006885-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO003396-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO005479-PA 7 KEGG: 04926+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 05170+2.7.11.1;KEGG: 05163+2.7.11.1 "Relaxin signaling pathway";"PI3K-Akt signaling pathway";"mTOR signaling pathway";"Human papillomavirus infection";"Thermogenesis";"Human immunodeficiency virus 1 infection";"Human cytomegalovirus infection" CFLO012297-PA 16 Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156827;Reactome: R-HSA-1799339;Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823 "Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Peptide chain elongation";"Translation initiation complex formation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"SRP-dependent cotranslational protein targeting to membrane";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation" CFLO005917-PA 1 Reactome: R-HSA-2564830 "Cytosolic iron-sulfur cluster assembly" CFLO001028-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO018652-PA 5 Reactome: R-HSA-5205685;Reactome: R-HSA-209543;Reactome: R-HSA-9020702;Reactome: R-HSA-209560;Reactome: R-HSA-205043 "Pink/Parkin Mediated Mitophagy";"p75NTR recruits signalling complexes";"Interleukin-1 signaling";"NF-kB is activated and signals survival";"NRIF signals cell death from the nucleus" CFLO001588-PA 6 MetaCyc: PWY-5941;MetaCyc: PWY-6731;KEGG: 00500+2.4.1.1;Reactome: R-HSA-70221;MetaCyc: PWY-6737;MetaCyc: PWY-7238 "Glycogen degradation II";"Starch degradation III";"Starch and sucrose metabolism";"Glycogen breakdown (glycogenolysis)";"Starch degradation V";"Sucrose biosynthesis II" CFLO016451-PA 7 Reactome: R-HSA-4549356;KEGG: 00510+2.7.8.15;MetaCyc: PWY-6471;MetaCyc: PWY-6470;Reactome: R-HSA-446193;MetaCyc: PWY-5265;KEGG: 00550+2.7.8.13 "Defective DPAGT1 causes DPAGT1-CDG (CDG-1j) and CMSTA2";"N-Glycan biosynthesis";"Peptidoglycan biosynthesis IV (Enterococcus faecium)";"Peptidoglycan biosynthesis V (beta-lactam resistance)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Peptidoglycan biosynthesis II (staphylococci)";"Peptidoglycan biosynthesis" CFLO013482-PA 7 KEGG: 04714+2.7.11.1;KEGG: 05165+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Thermogenesis";"Human papillomavirus infection";"Relaxin signaling pathway";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO010962-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156827;Reactome: R-HSA-72764;Reactome: R-HSA-1799339;Reactome: R-HSA-156902;Reactome: R-HSA-72689 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination";"SRP-dependent cotranslational protein targeting to membrane";"Peptide chain elongation";"Formation of a pool of free 40S subunits" CFLO016708-PA 1 Reactome: R-HSA-189451 "Heme biosynthesis" CFLO005279-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO007213-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO005365-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO015797-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" CFLO005966-PA 2 MetaCyc: PWY-6749;KEGG: 00520+5.4.2.10 "CMP-legionaminate biosynthesis I";"Amino sugar and nucleotide sugar metabolism" CFLO007950-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO000240-PA 3 Reactome: R-HSA-9033241;Reactome: R-HSA-9603798;Reactome: R-HSA-8866654 "Peroxisomal protein import";"Class I peroxisomal membrane protein import";"E3 ubiquitin ligases ubiquitinate target proteins" CFLO003369-PA 3 Reactome: R-HSA-947581;MetaCyc: PWY-5963;KEGG: 00790+2.8.1.9 "Molybdenum cofactor biosynthesis";"Thio-molybdenum cofactor biosynthesis";"Folate biosynthesis" CFLO016914-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO001746-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO018351-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO014309-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO001473-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO009884-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-6798695 "SRP-dependent cotranslational protein targeting to membrane";"Neutrophil degranulation" CFLO006485-PA 2 Reactome: R-HSA-427413;Reactome: R-HSA-3214847 "NoRC negatively regulates rRNA expression";"HATs acetylate histones" CFLO000968-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO015646-PA 1 Reactome: R-HSA-8943724 "Regulation of PTEN gene transcription" CFLO004524-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" CFLO012555-PA 20 Reactome: R-HSA-5656121;Reactome: R-HSA-5651801;Reactome: R-HSA-69091;Reactome: R-HSA-110312;Reactome: R-HSA-69473;Reactome: R-HSA-5693616;Reactome: R-HSA-5696400;Reactome: R-HSA-176187;Reactome: R-HSA-6782135;Reactome: R-HSA-5685938;Reactome: R-HSA-5685942;Reactome: R-HSA-110320;Reactome: R-HSA-5693607;Reactome: R-HSA-6804756;Reactome: R-HSA-5655862;Reactome: R-HSA-174411;Reactome: R-HSA-5656169;Reactome: R-HSA-5696397;Reactome: R-HSA-110314;Reactome: R-HSA-6782210 "Translesion synthesis by POLI";"PCNA-Dependent Long Patch Base Excision Repair";"Polymerase switching";"Translesion synthesis by REV1";"G2/M DNA damage checkpoint";"Presynaptic phase of homologous DNA pairing and strand exchange";"Dual Incision in GG-NER";"Activation of ATR in response to replication stress";"Dual incision in TC-NER";"HDR through Single Strand Annealing (SSA)";"HDR through Homologous Recombination (HRR)";"Translesion Synthesis by POLH";"Processing of DNA double-strand break ends";"Regulation of TP53 Activity through Phosphorylation";"Translesion synthesis by POLK";"Polymerase switching on the C-strand of the telomere";"Termination of translesion DNA synthesis";"Gap-filling DNA repair synthesis and ligation in GG-NER";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO004699-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO015538-PA 5 Reactome: R-HSA-390450;Reactome: R-HSA-389960;Reactome: R-HSA-390471;Reactome: R-HSA-6814122;Reactome: R-HSA-389957 "Folding of actin by CCT/TriC";"Formation of tubulin folding intermediates by CCT/TriC";"Association of TriC/CCT with target proteins during biosynthesis";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding";"Prefoldin mediated transfer of substrate to CCT/TriC" CFLO003936-PA 4 Reactome: R-HSA-76071;Reactome: R-HSA-749476;Reactome: R-HSA-76061;Reactome: R-HSA-76066 "RNA Polymerase III Transcription Initiation From Type 3 Promoter";"RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter" CFLO015618-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO009994-PA 7 KEGG: 00051+3.1.3.11;KEGG: 00030+3.1.3.11;KEGG: 00710+3.1.3.11;MetaCyc: PWY-5484;KEGG: 00680+3.1.3.11;KEGG: 00010+3.1.3.11;Reactome: R-HSA-70263 "Fructose and mannose metabolism";"Pentose phosphate pathway";"Carbon fixation in photosynthetic organisms";"Glycolysis II (from fructose 6-phosphate)";"Methane metabolism";"Glycolysis / Gluconeogenesis";"Gluconeogenesis" CFLO014026-PA 16 Reactome: R-HSA-192823;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-156827;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695 "Viral mRNA Translation";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"L13a-mediated translational silencing of Ceruloplasmin expression";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex" CFLO000267-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO002139-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO017422-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO001927-PA 2 Reactome: R-HSA-429947;Reactome: R-HSA-6804115 "Deadenylation of mRNA";"TP53 regulates transcription of additional cell cycle genes whose exact role in the p53 pathway remain uncertain" CFLO007123-PA 16 Reactome: R-HSA-174154;Reactome: R-HSA-176407;Reactome: R-HSA-179409;Reactome: R-HSA-983168;Reactome: R-HSA-174178;Reactome: R-HSA-8853884;Reactome: R-HSA-2467813;Reactome: R-HSA-176412;Reactome: R-HSA-176409;Reactome: R-HSA-141430;Reactome: R-HSA-69017;Reactome: R-HSA-176408;Reactome: R-HSA-174084;Reactome: R-HSA-174048;Reactome: R-HSA-174184;Reactome: R-HSA-2559582 "APC/C:Cdc20 mediated degradation of Securin";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC-Cdc20 mediated degradation of Nek2A";"Antigen processing: Ubiquitination & Proteasome degradation";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"Transcriptional Regulation by VENTX";"Separation of Sister Chromatids";"Phosphorylation of the APC/C";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Inactivation of APC/C via direct inhibition of the APC/C complex";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of APC/C activators between G1/S and early anaphase";"Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Cyclin B";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Senescence-Associated Secretory Phenotype (SASP)" CFLO010625-PA 14 KEGG: 00062+2.3.1.199;MetaCyc: PWY-6433;MetaCyc: PWY-7725;Reactome: R-HSA-75876;MetaCyc: PWY-8041;MetaCyc: PWY-7035;MetaCyc: PWY-7036;MetaCyc: PWY-7724;MetaCyc: PWY-7619;MetaCyc: PWY-5972;MetaCyc: PWY-5080;MetaCyc: PWY-6598;MetaCyc: PWY-7602;MetaCyc: PWY-7601 "Fatty acid elongation";"Hydroxylated fatty acid biosynthesis (plants)";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Synthesis of very long-chain fatty acyl-CoAs";"Ultra-long-chain fatty acid biosynthesis";"(9Z)-tricosene biosynthesis";"Very long chain fatty acid biosynthesis II";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Juniperonate biosynthesis";"Stearate biosynthesis I (animals)";"Very long chain fatty acid biosynthesis I";"Sciadonate biosynthesis";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)" CFLO012204-PA 9 Reactome: R-HSA-174430;Reactome: R-HSA-69166;Reactome: R-HSA-68962;Reactome: R-HSA-174411;Reactome: R-HSA-69205;Reactome: R-HSA-68952;Reactome: R-HSA-69091;Reactome: R-HSA-113501;Reactome: R-HSA-69183 "Telomere C-strand synthesis initiation";"Removal of the Flap Intermediate";"Activation of the pre-replicative complex";"Polymerase switching on the C-strand of the telomere";"G1/S-Specific Transcription";"DNA replication initiation";"Polymerase switching";"Inhibition of replication initiation of damaged DNA by RB1/E2F1";"Processive synthesis on the lagging strand" CFLO009560-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO013916-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO007979-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO009329-PA 2 Reactome: R-HSA-418890;Reactome: R-HSA-3295583 "Role of second messengers in netrin-1 signaling";"TRP channels" CFLO004205-PA 1 Reactome: R-HSA-6802952 "Signaling by BRAF and RAF fusions" CFLO010340-PA 2 Reactome: R-HSA-373080;Reactome: R-HSA-3238698 "Class B/2 (Secretin family receptors)";"WNT ligand biogenesis and trafficking" CFLO012248-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO007965-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-375276 "G alpha (i) signalling events";"Peptide ligand-binding receptors" CFLO017998-PA 1 Reactome: R-HSA-2028269 "Signaling by Hippo" CFLO015230-PA 7 Reactome: R-HSA-68827;Reactome: R-HSA-69205;Reactome: R-HSA-68689;Reactome: R-HSA-68962;Reactome: R-HSA-176187;Reactome: R-HSA-68867;Reactome: R-HSA-68949 "CDT1 association with the CDC6:ORC:origin complex";"G1/S-Specific Transcription";"CDC6 association with the ORC:origin complex";"Activation of the pre-replicative complex";"Activation of ATR in response to replication stress";"Assembly of the pre-replicative complex";"Orc1 removal from chromatin" CFLO006117-PA 1 Reactome: R-HSA-196108 "Pregnenolone biosynthesis" CFLO018565-PA 3 Reactome: R-HSA-4086398;Reactome: R-HSA-418457;Reactome: R-HSA-392517 "Ca2+ pathway";"cGMP effects";"Rap1 signalling" CFLO010696-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO014829-PA 33 Reactome: R-HSA-3108214;Reactome: R-HSA-180746;Reactome: R-HSA-6784531;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-2467813;Reactome: R-HSA-4085377;Reactome: R-HSA-5663220;Reactome: R-HSA-191859;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-9609690;Reactome: R-HSA-68877;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-159230;Reactome: R-HSA-9648025;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-168325;Reactome: R-HSA-2500257;Reactome: R-HSA-159236;Reactome: R-HSA-141444;Reactome: R-HSA-4570464;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-3232142;Reactome: R-HSA-168276;Reactome: R-HSA-170822;Reactome: R-HSA-4615885;Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638 "SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein";"tRNA processing in the nucleus";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"Separation of Sister Chromatids";"SUMOylation of SUMOylation proteins";"RHO GTPases Activate Formins";"snRNP Assembly";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"HCMV Early Events";"Mitotic Prometaphase";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Transport of the SLBP Dependant Mature mRNA";"EML4 and NUDC in mitotic spindle formation";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Viral Messenger RNA Synthesis";"Resolution of Sister Chromatid Cohesion";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"SUMOylation of RNA binding proteins";"HCMV Late Events";"Transcriptional regulation by small RNAs";"SUMOylation of ubiquitinylation proteins";"NS1 Mediated Effects on Host Pathways";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"SUMOylation of DNA replication proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins" CFLO008226-PA 1 Reactome: R-HSA-5663220 "RHO GTPases Activate Formins" CFLO001142-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" CFLO005083-PA 1 Reactome: R-HSA-6809371 "Formation of the cornified envelope" CFLO001724-PA 4 MetaCyc: PWY-7822;MetaCyc: PWY-6902;MetaCyc: PWY-6855;KEGG: 00520+3.2.1.14 "Chitin degradation III (Serratia)";"Chitin degradation II (Vibrio)";"Chitin degradation I (archaea)";"Amino sugar and nucleotide sugar metabolism" CFLO015385-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO004971-PA 1 Reactome: R-HSA-70895 "Branched-chain amino acid catabolism" CFLO011424-PA 2 Reactome: R-HSA-1483191;Reactome: R-HSA-425366 "Synthesis of PC";"Transport of bile salts and organic acids, metal ions and amine compounds" CFLO012098-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO008118-PA 1 KEGG: 00970+6.1.1.2 "Aminoacyl-tRNA biosynthesis" CFLO002883-PA 4 Reactome: R-HSA-6807505;KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "RNA polymerase II transcribes snRNA genes";"T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" CFLO008450-PA 1 Reactome: R-HSA-9037629 "Lewis blood group biosynthesis" CFLO019367-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" CFLO015439-PA 2 Reactome: R-HSA-1483166;Reactome: R-HSA-1483148 "Synthesis of PA";"Synthesis of PG" CFLO013811-PA 3 Reactome: R-HSA-749476;Reactome: R-HSA-76061;Reactome: R-HSA-76066 "RNA Polymerase III Abortive And Retractive Initiation";"RNA Polymerase III Transcription Initiation From Type 1 Promoter";"RNA Polymerase III Transcription Initiation From Type 2 Promoter" CFLO000704-PA 2 MetaCyc: PWY-6558;Reactome: R-HSA-2022928 "Heparan sulfate biosynthesis (late stages)";"HS-GAG biosynthesis" CFLO001543-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-5628897 "Respiratory electron transport";"TP53 Regulates Metabolic Genes" CFLO003054-PA 9 Reactome: R-HSA-6804756;Reactome: R-HSA-167161;Reactome: R-HSA-167172;Reactome: R-HSA-76042;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-75953;Reactome: R-HSA-167162;Reactome: R-HSA-73779 "Regulation of TP53 Activity through Phosphorylation";"HIV Transcription Initiation";"Transcription of the HIV genome";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape";"RNA Polymerase II Transcription Pre-Initiation And Promoter Opening" CFLO001127-PA 5 MetaCyc: PWY-7922;MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109;MetaCyc: PWY-7979;KEGG: 00514+2.4.1.109 "Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis";"Protein O-mannosylation III (mammals, core M3)";"Other types of O-glycan biosynthesis" CFLO015472-PA 1 Reactome: R-HSA-5689880 "Ub-specific processing proteases" CFLO004473-PA 2 Reactome: R-HSA-162588;Reactome: R-HSA-917729 "Budding and maturation of HIV virion";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO006542-PA 9 Reactome: R-HSA-5685938;Reactome: R-HSA-5693579;Reactome: R-HSA-5685942;Reactome: R-HSA-5693568;Reactome: R-HSA-5693607;Reactome: R-HSA-69473;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-6804756 "HDR through Single Strand Annealing (SSA)";"Homologous DNA Pairing and Strand Exchange";"HDR through Homologous Recombination (HRR)";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Processing of DNA double-strand break ends";"G2/M DNA damage checkpoint";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Regulation of TP53 Activity through Phosphorylation" CFLO006349-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO000893-PA 1 Reactome: R-HSA-9639288 "Amino acids regulate mTORC1" CFLO001593-PA 2 Reactome: R-HSA-8876198;Reactome: R-HSA-6811436 "RAB GEFs exchange GTP for GDP on RABs";"COPI-independent Golgi-to-ER retrograde traffic" CFLO018800-PA 13 Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-1799339;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557 "Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"SRP-dependent cotranslational protein targeting to membrane";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis" CFLO008619-PA 11 Reactome: R-HSA-418594;Reactome: R-HSA-5610787;Reactome: R-HSA-170660;Reactome: R-HSA-170670;Reactome: R-HSA-163359;Reactome: R-HSA-418597;Reactome: R-HSA-432040;Reactome: R-HSA-164378;KEGG: 00230+4.6.1.1;Reactome: R-HSA-418555;Reactome: R-HSA-163615 "G alpha (i) signalling events";"Hedgehog 'off' state";"Adenylate cyclase activating pathway";"Adenylate cyclase inhibitory pathway";"Glucagon signaling in metabolic regulation";"G alpha (z) signalling events";"Vasopressin regulates renal water homeostasis via Aquaporins";"PKA activation in glucagon signalling";"Purine metabolism";"G alpha (s) signalling events";"PKA activation" CFLO006703-PA 3 KEGG: 00770+2.7.1.33;MetaCyc: PWY-3961;Reactome: R-HSA-196783 "Pantothenate and CoA biosynthesis";"Phosphopantothenate biosynthesis II";"Coenzyme A biosynthesis" CFLO012255-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO009089-PA 5 Reactome: R-HSA-73762;Reactome: R-HSA-6804758;Reactome: R-HSA-3214815;Reactome: R-HSA-427389;Reactome: R-HSA-8943724 "RNA Polymerase I Transcription Initiation";"Regulation of TP53 Activity through Acetylation";"HDACs deacetylate histones";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Regulation of PTEN gene transcription" CFLO006143-PA 2 Reactome: R-HSA-8950505;Reactome: R-HSA-1237112 "Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation";"Methionine salvage pathway" CFLO012168-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO014328-PA 10 Reactome: R-HSA-8875360;Reactome: R-HSA-917729;Reactome: R-HSA-9635644;Reactome: R-HSA-182971;Reactome: R-HSA-9636383;Reactome: R-HSA-6807004;Reactome: R-HSA-5689880;Reactome: R-HSA-8856828;Reactome: R-HSA-8856825;Reactome: R-HSA-432720 "InlB-mediated entry of Listeria monocytogenes into host cell";"Endosomal Sorting Complex Required For Transport (ESCRT)";"Inhibition of membrane repair";"EGFR downregulation";"Prevention of phagosomal-lysosomal fusion";"Negative regulation of MET activity";"Ub-specific processing proteases";"Clathrin-mediated endocytosis";"Cargo recognition for clathrin-mediated endocytosis";"Lysosome Vesicle Biogenesis" CFLO013498-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" CFLO001720-PA 27 Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-3301854;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-159236;Reactome: R-HSA-4085377;Reactome: R-HSA-4570464;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-5619107;Reactome: R-HSA-170822;Reactome: R-HSA-159227;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-168333;Reactome: R-HSA-3232142;Reactome: R-HSA-180910 "HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Nuclear Pore Complex (NPC) Disassembly";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of SUMOylation proteins";"SUMOylation of RNA binding proteins";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Transport of the SLBP independent Mature mRNA";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"SUMOylation of ubiquitinylation proteins";"Vpr-mediated nuclear import of PICs" CFLO003383-PA 2 Reactome: R-HSA-2024096;Reactome: R-HSA-2206307 "HS-GAG degradation";"MPS IIIA - Sanfilippo syndrome A" CFLO013674-PA 15 Reactome: R-HSA-6807505;Reactome: R-HSA-167158;Reactome: R-HSA-674695;Reactome: R-HSA-167290;Reactome: R-HSA-167238;Reactome: R-HSA-167200;Reactome: R-HSA-75955;Reactome: R-HSA-6796648;Reactome: R-HSA-112382;Reactome: R-HSA-167287;Reactome: R-HSA-113418;Reactome: R-HSA-167243;Reactome: R-HSA-167246;Reactome: R-HSA-167242;Reactome: R-HSA-167152 "RNA polymerase II transcribes snRNA genes";"Formation of the HIV-1 Early Elongation Complex";"RNA Polymerase II Pre-transcription Events";"Pausing and recovery of HIV elongation";"Pausing and recovery of Tat-mediated HIV elongation";"Formation of HIV-1 elongation complex containing HIV-1 Tat";"RNA Polymerase II Transcription Elongation";"TP53 Regulates Transcription of DNA Repair Genes";"Formation of RNA Pol II elongation complex";"HIV elongation arrest and recovery";"Formation of the Early Elongation Complex";"Tat-mediated HIV elongation arrest and recovery";"Tat-mediated elongation of the HIV-1 transcript";"Abortive elongation of HIV-1 transcript in the absence of Tat";"Formation of HIV elongation complex in the absence of HIV Tat" CFLO000389-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO012377-PA 1 Reactome: R-HSA-8949613 "Cristae formation" CFLO012318-PA 1 Reactome: R-HSA-202733 "Cell surface interactions at the vascular wall" CFLO015382-PA 1 Reactome: R-HSA-6791226 "Major pathway of rRNA processing in the nucleolus and cytosol" CFLO006695-PA 2 Reactome: R-HSA-8866654;Reactome: R-HSA-9033241 "E3 ubiquitin ligases ubiquitinate target proteins";"Peroxisomal protein import" CFLO001734-PA 1 Reactome: R-HSA-1296052 "Ca2+ activated K+ channels" CFLO008231-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO007704-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" CFLO000063-PA 1 MetaCyc: PWY-7511 "Protein ubiquitination" CFLO018747-PA 1 Reactome: R-HSA-3214841 "PKMTs methylate histone lysines" CFLO005211-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO016880-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO001584-PA 16 Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-72649;Reactome: R-HSA-156902;Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-156827;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823 "Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Translation initiation complex formation";"Peptide chain elongation";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"L13a-mediated translational silencing of Ceruloplasmin expression";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation" CFLO012988-PA 7 KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Human papillomavirus infection";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO012127-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO007475-PA 1 Reactome: R-HSA-2468052 "Establishment of Sister Chromatid Cohesion" CFLO005156-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO007800-PA 1 Reactome: R-HSA-111957 "Cam-PDE 1 activation" CFLO003152-PA 3 KEGG: 00600+3.1.4.12;MetaCyc: PWY-7277;Reactome: R-HSA-1660662 "Sphingolipid metabolism";"Sphingolipid biosynthesis (mammals)";"Glycosphingolipid metabolism" CFLO001394-PA 7 Reactome: R-HSA-2660826;Reactome: R-HSA-9013507;Reactome: R-HSA-2644606;Reactome: R-HSA-2122948;Reactome: R-HSA-2979096;Reactome: R-HSA-2894862;Reactome: R-HSA-2691232 "Constitutive Signaling by NOTCH1 t(7;9)(NOTCH1:M1580_K2555) Translocation Mutant";"NOTCH3 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 PEST Domain Mutants";"Activated NOTCH1 Transmits Signal to the Nucleus";"NOTCH2 Activation and Transmission of Signal to the Nucleus";"Constitutive Signaling by NOTCH1 HD+PEST Domain Mutants";"Constitutive Signaling by NOTCH1 HD Domain Mutants" CFLO001097-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" CFLO014509-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO003613-PA 1 Reactome: R-HSA-6794361 "Neurexins and neuroligins" CFLO011458-PA 5 Reactome: R-HSA-964975;Reactome: R-HSA-6798695;KEGG: 00750+2.7.1.35;MetaCyc: PWY-7282;MetaCyc: PWY-7204 "Vitamins B6 activation to pyridoxal phosphate";"Neutrophil degranulation";"Vitamin B6 metabolism";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis";"Pyridoxal 5'-phosphate salvage II (plants)" CFLO001009-PA 1 Reactome: R-HSA-1660662 "Glycosphingolipid metabolism" CFLO000557-PA 18 MetaCyc: PWY-8051;Reactome: R-HSA-1482925;MetaCyc: PWY-8053;Reactome: R-HSA-1482922;MetaCyc: PWY-7417;Reactome: R-HSA-1482839;KEGG: 00592+3.1.1.4;Reactome: R-HSA-1482788;MetaCyc: PWY-6803;KEGG: 00564+3.1.1.4;MetaCyc: PWY-7416;KEGG: 00590+3.1.1.4;MetaCyc: PWY-7409;Reactome: R-HSA-1482801;MetaCyc: PWY-7783;Reactome: R-HSA-1483166;KEGG: 00565+3.1.1.4;KEGG: 00591+3.1.1.4 "Anandamide biosynthesis I";"Acyl chain remodelling of PG";"Anandamide biosynthesis II";"Acyl chain remodelling of PI";"Phospholipid remodeling (phosphatidate, yeast)";"Acyl chain remodelling of PE";"alpha-Linolenic acid metabolism";"Acyl chain remodelling of PC";"Phosphatidylcholine acyl editing";"Glycerophospholipid metabolism";"Phospholipid remodeling (phosphatidylcholine, yeast)";"Arachidonic acid metabolism";"Phospholipid remodeling (phosphatidylethanolamine, yeast)";"Acyl chain remodelling of PS";"Plasmalogen degradation";"Synthesis of PA";"Ether lipid metabolism";"Linoleic acid metabolism" CFLO014528-PA 2 Reactome: R-HSA-375276;Reactome: R-HSA-418594 "Peptide ligand-binding receptors";"G alpha (i) signalling events" CFLO018913-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO015389-PA 3 Reactome: R-HSA-5368286;Reactome: R-HSA-5389840;Reactome: R-HSA-5419276 "Mitochondrial translation initiation";"Mitochondrial translation elongation";"Mitochondrial translation termination" CFLO003171-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-6803205 "RAB geranylgeranylation";"TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain" CFLO013399-PA 6 Reactome: R-HSA-9640463;MetaCyc: PWY-7656;MetaCyc: PWY-5884;MetaCyc: PWY-6733;KEGG: 00073+1.2.1.84;MetaCyc: PWY-7782 "Wax biosynthesis";"Spodoptera littoralis pheromone biosynthesis";"Wax esters biosynthesis I";"Sporopollenin precursors biosynthesis";"Cutin, suberine and wax biosynthesis";"Plasmalogen biosynthesis" CFLO004921-PA 1 Reactome: R-HSA-216083 "Integrin cell surface interactions" CFLO002788-PA 1 Reactome: R-HSA-198933 "Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell" CFLO015688-PA 3 Reactome: R-HSA-196780;Reactome: R-HSA-70263;Reactome: R-HSA-3371599 "Biotin transport and metabolism";"Gluconeogenesis";"Defective HLCS causes multiple carboxylase deficiency" CFLO017854-PA 7 KEGG: 05165+2.7.11.1;KEGG: 04714+2.7.11.1;KEGG: 04150+2.7.11.1;KEGG: 04151+2.7.11.1;KEGG: 04926+2.7.11.1;KEGG: 05163+2.7.11.1;KEGG: 05170+2.7.11.1 "Human papillomavirus infection";"Thermogenesis";"mTOR signaling pathway";"PI3K-Akt signaling pathway";"Relaxin signaling pathway";"Human cytomegalovirus infection";"Human immunodeficiency virus 1 infection" CFLO012617-PA 1 MetaCyc: PWY-7799 "Arg/N-end rule pathway (eukaryotic)" CFLO007320-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO017124-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO008117-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" CFLO018203-PA 3 MetaCyc: PWY-7174;MetaCyc: PWY-4361;KEGG: 00270+5.3.1.23 "S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation II";"S-methyl-5-thio-alpha-D-ribose 1-phosphate degradation I";"Cysteine and methionine metabolism" CFLO016603-PA 1 Reactome: R-HSA-6790901 "rRNA modification in the nucleus and cytosol" CFLO009306-PA 2 Reactome: R-HSA-5633231;Reactome: R-HSA-446193 "Defective ALG14 causes congenital myasthenic syndrome (ALG14-CMS)";"Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein" CFLO010261-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO013083-PA 6 MetaCyc: PWY-5067;KEGG: 00500+2.4.1.18;MetaCyc: PWY-7900;KEGG: 00500+3.2.1.1;MetaCyc: PWY-622;Reactome: R-HSA-189085 "Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism";"Glycogen biosynthesis III (from alpha-maltose 1-phosphate)";"Starch and sucrose metabolism";"Starch biosynthesis";"Digestion of dietary carbohydrate" CFLO019063-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO006179-PA 3 Reactome: R-HSA-1445148;Reactome: R-HSA-5620916;Reactome: R-HSA-264876 "Translocation of SLC2A4 (GLUT4) to the plasma membrane";"VxPx cargo-targeting to cilium";"Insulin processing" CFLO006511-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" CFLO015669-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO014190-PA 13 MetaCyc: PWY-6902;MetaCyc: PWY-7883;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7822;KEGG: 00511+3.2.1.52;Reactome: R-HSA-2160916;KEGG: 00520+3.2.1.52;KEGG: 00603+3.2.1.52;Reactome: R-HSA-2024101;Reactome: R-HSA-2022857;Reactome: R-HSA-1660662;KEGG: 00513+3.2.1.52;KEGG: 00531+3.2.1.52 "Chitin degradation II (Vibrio)";"Anhydromuropeptides recycling II";"Glycosphingolipid biosynthesis - ganglio series";"Chitin degradation III (Serratia)";"Other glycan degradation";"Hyaluronan uptake and degradation";"Amino sugar and nucleotide sugar metabolism";"Glycosphingolipid biosynthesis - globo and isoglobo series";"CS/DS degradation";"Keratan sulfate degradation";"Glycosphingolipid metabolism";"Various types of N-glycan biosynthesis";"Glycosaminoglycan degradation" CFLO007368-PA 42 Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-9616222;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-73772;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-2559580;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-73728;Reactome: R-HSA-606279;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-3214841;Reactome: R-HSA-201722;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847 "Packaging Of Telomere Ends";"HCMV Early Events";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Transcriptional regulation of granulopoiesis";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"RNA Polymerase I Promoter Escape";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Oxidative Stress Induced Senescence";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"RNA Polymerase I Promoter Opening";"Deposition of new CENPA-containing nucleosomes at the centromere";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"PKMTs methylate histone lysines";"Formation of the beta-catenin:TCF transactivating complex";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HCMV Late Events";"Transcriptional regulation by small RNAs";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones" CFLO015965-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO018124-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5389840;Reactome: R-HSA-5368286 "Mitochondrial translation termination";"Mitochondrial translation elongation";"Mitochondrial translation initiation" CFLO006262-PA 2 Reactome: R-HSA-8866654;MetaCyc: PWY-7511 "E3 ubiquitin ligases ubiquitinate target proteins";"Protein ubiquitination" CFLO012254-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" CFLO010268-PA 2 Reactome: R-HSA-430039;Reactome: R-HSA-72163 "mRNA decay by 5' to 3' exoribonuclease";"mRNA Splicing - Major Pathway" CFLO013823-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO000715-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO008446-PA 1 Reactome: R-HSA-6811434 "COPI-dependent Golgi-to-ER retrograde traffic" CFLO004808-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO003253-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO000693-PA 3 KEGG: 04660+3.1.3.16;KEGG: 05235+3.1.3.16;KEGG: 04658+3.1.3.16 "T cell receptor signaling pathway";"PD-L1 expression and PD-1 checkpoint pathway in cancer";"Th1 and Th2 cell differentiation" CFLO003182-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" CFLO002566-PA 12 MetaCyc: PWY-5871;KEGG: 00130+2.1.1.222+2.1.1.64;MetaCyc: PWY-5855;MetaCyc: PWY-7230;Reactome: R-HSA-2142789;MetaCyc: PWY-5872;MetaCyc: PWY-5873;MetaCyc: PWY-7233;MetaCyc: PWY-5856;MetaCyc: PWY-6708;MetaCyc: PWY-5870;MetaCyc: PWY-5857 "Ubiquinol-9 biosynthesis (eukaryotic)";"Ubiquinone and other terpenoid-quinone biosynthesis";"Ubiquinol-7 biosynthesis (prokaryotic)";"Ubiquinol-6 biosynthesis from 4-aminobenzoate (yeast)";"Ubiquinol biosynthesis";"Ubiquinol-10 biosynthesis (eukaryotic)";"Ubiquinol-7 biosynthesis (eukaryotic)";"Ubiquinol-6 bypass biosynthesis (eukaryotic)";"Ubiquinol-9 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (prokaryotic)";"Ubiquinol-8 biosynthesis (eukaryotic)";"Ubiquinol-10 biosynthesis (prokaryotic)" CFLO001285-PA 3 Reactome: R-HSA-194840;Reactome: R-HSA-193648;Reactome: R-HSA-416482 "Rho GTPase cycle";"NRAGE signals death through JNK";"G alpha (12/13) signalling events" CFLO005098-PA 10 MetaCyc: PWY-7198;MetaCyc: PWY-7187;Reactome: R-HSA-69205;MetaCyc: PWY-7210;Reactome: R-HSA-499943;MetaCyc: PWY-7184;MetaCyc: PWY-7199;MetaCyc: PWY-3841;KEGG: 00670+2.1.1.45;KEGG: 00240+2.1.1.45 "Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Pyrimidine deoxyribonucleotides de novo biosynthesis II";"G1/S-Specific Transcription";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Interconversion of nucleotide di- and triphosphates";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleosides salvage";"Folate transformations II (plants)";"One carbon pool by folate";"Pyrimidine metabolism" CFLO005955-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" CFLO000349-PA 16 Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72764;Reactome: R-HSA-72695;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827 "Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Translation initiation complex formation";"Eukaryotic Translation Termination";"Formation of the ternary complex, and subsequently, the 43S complex";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO008722-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO018673-PA 2 Reactome: R-HSA-388479;Reactome: R-HSA-416476 "Vasopressin-like receptors";"G alpha (q) signalling events" CFLO002919-PA 1 Reactome: R-HSA-159236 "Transport of Mature mRNA derived from an Intron-Containing Transcript" CFLO004439-PA 56 Reactome: R-HSA-69601;Reactome: R-HSA-174113;Reactome: R-HSA-1234176;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-9010553;Reactome: R-HSA-349425;Reactome: R-HSA-202424;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-8852276;Reactome: R-HSA-2871837;Reactome: R-HSA-180534;Reactome: R-HSA-5678895;Reactome: R-HSA-8948751;Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-1169091;Reactome: R-HSA-174184;Reactome: R-HSA-5689880;Reactome: R-HSA-382556;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5676590;Reactome: R-HSA-9020702;Reactome: R-HSA-983168;Reactome: R-HSA-5658442;Reactome: R-HSA-5362768;Reactome: R-HSA-2467813;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-8941858;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-211733;Reactome: R-HSA-69017;Reactome: R-HSA-5668541;Reactome: R-HSA-174084;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-4641258;Reactome: R-HSA-5687128;Reactome: R-HSA-9604323;Reactome: R-HSA-5607764 "Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"SCF-beta-TrCP mediated degradation of Emi1";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of expression of SLITs and ROBOs";"Autodegradation of the E3 ubiquitin ligase COP1";"Downstream TCR signaling";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"The role of GTSE1 in G2/M progression after G2 checkpoint";"FCERI mediated NF-kB activation";"Vpu mediated degradation of CD4";"Defective CFTR causes cystic fibrosis";"Regulation of PTEN stability and activity";"Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"Activation of NF-kappaB in B cells";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"Ub-specific processing proteases";"ABC-family proteins mediated transport";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"NIK-->noncanonical NF-kB signaling";"Interleukin-1 signaling";"Antigen processing: Ubiquitination & Proteasome degradation";"Regulation of RAS by GAPs";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Separation of Sister Chromatids";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"CDK-mediated phosphorylation and removal of Cdc6";"TNFR2 non-canonical NF-kB pathway";"Autodegradation of Cdh1 by Cdh1:APC/C";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Degradation of DVL";"MAPK6/MAPK4 signaling";"Negative regulation of NOTCH4 signaling";"CLEC7A (Dectin-1) signaling" CFLO008220-PA 13 MetaCyc: PWY-6842;MetaCyc: PWY-7112;MetaCyc: PWY-7533;KEGG: 00980+2.5.1.18;Reactome: R-HSA-156590;KEGG: 00480+2.5.1.18+1.8.5.1;KEGG: 00982+2.5.1.18;KEGG: 00053+1.8.5.1;MetaCyc: PWY-6370;MetaCyc: PWY-4061;MetaCyc: PWY-2261;Reactome: R-HSA-196836;KEGG: 00983+2.5.1.18 "Glutathione-mediated detoxification II";"4-hydroxy-2-nonenal detoxification";"Gliotoxin biosynthesis";"Metabolism of xenobiotics by cytochrome P450";"Glutathione conjugation";"Glutathione metabolism";"Drug metabolism - cytochrome P450";"Ascorbate and aldarate metabolism";"Ascorbate recycling (cytosolic)";"Glutathione-mediated detoxification I";"Ascorbate glutathione cycle";"Vitamin C (ascorbate) metabolism";"Drug metabolism - other enzymes" CFLO010201-PA 5 MetaCyc: PWY-7210;MetaCyc: PWY-7185;KEGG: 00240+3.6.1.6;Reactome: R-HSA-6798695;KEGG: 00230+3.6.1.6 "Pyrimidine deoxyribonucleotides biosynthesis from CTP";"UTP and CTP dephosphorylation I";"Pyrimidine metabolism";"Neutrophil degranulation";"Purine metabolism" CFLO000973-PA 1 Reactome: R-HSA-6814848 "Glycerophospholipid catabolism" CFLO000434-PA 3 Reactome: R-HSA-418594;Reactome: R-HSA-375276;Reactome: R-HSA-416476 "G alpha (i) signalling events";"Peptide ligand-binding receptors";"G alpha (q) signalling events" CFLO005664-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO010805-PA 17 Reactome: R-HSA-5693568;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-69473;Reactome: R-HSA-5685938;Reactome: R-HSA-5685942;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-6804756;Reactome: R-HSA-912446;Reactome: R-HSA-5693571;Reactome: R-HSA-3270619;Reactome: R-HSA-1834949;Reactome: R-HSA-5685939;Reactome: R-HSA-5693548;Reactome: R-HSA-5693579;Reactome: R-HSA-2559586 "Resolution of D-loop Structures through Holliday Junction Intermediates";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"G2/M DNA damage checkpoint";"HDR through Single Strand Annealing (SSA)";"HDR through Homologous Recombination (HRR)";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Regulation of TP53 Activity through Phosphorylation";"Meiotic recombination";"Nonhomologous End-Joining (NHEJ)";"IRF3-mediated induction of type I IFN";"Cytosolic sensors of pathogen-associated DNA";"HDR through MMEJ (alt-NHEJ)";"Sensing of DNA Double Strand Breaks";"Homologous DNA Pairing and Strand Exchange";"DNA Damage/Telomere Stress Induced Senescence" CFLO016183-PA 4 Reactome: R-HSA-73762;Reactome: R-HSA-3214815;Reactome: R-HSA-427389;Reactome: R-HSA-8943724 "RNA Polymerase I Transcription Initiation";"HDACs deacetylate histones";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Regulation of PTEN gene transcription" CFLO012302-PA 1 Reactome: R-HSA-418594 "G alpha (i) signalling events" CFLO005916-PA 8 MetaCyc: PWY-5686;MetaCyc: PWY-7791;Reactome: R-HSA-1799339;KEGG: 00240+2.4.2.10;MetaCyc: PWY-7790;KEGG: 00240+4.1.1.23;Reactome: R-HSA-500753;KEGG: 00983+2.4.2.10 "UMP biosynthesis I";"UMP biosynthesis III";"SRP-dependent cotranslational protein targeting to membrane";"Pyrimidine metabolism";"UMP biosynthesis II";"Pyrimidine metabolism";"Pyrimidine biosynthesis";"Drug metabolism - other enzymes" CFLO001978-PA 4 Reactome: R-HSA-446203;Reactome: R-HSA-1799339;Reactome: R-HSA-6798695;Reactome: R-HSA-879415 "Asparagine N-linked glycosylation";"SRP-dependent cotranslational protein targeting to membrane";"Neutrophil degranulation";"Advanced glycosylation endproduct receptor signaling" CFLO002303-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO008197-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO015412-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO000350-PA 1 Reactome: R-HSA-8876198 "RAB GEFs exchange GTP for GDP on RABs" CFLO005200-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO015783-PA 3 KEGG: 00500+2.4.1.11;Reactome: R-HSA-3322077;MetaCyc: PWY-5067 "Starch and sucrose metabolism";"Glycogen synthesis";"Glycogen biosynthesis II (from UDP-D-Glucose)" CFLO003095-PA 6 Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72706 "Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO011362-PA 1 Reactome: R-HSA-3295583 "TRP channels" CFLO014547-PA 2 Reactome: R-HSA-5578998;Reactome: R-HSA-174403 "Defective OPLAH causes 5-oxoprolinase deficiency (OPLAHD)";"Glutathione synthesis and recycling" CFLO003115-PA 1 Reactome: R-HSA-425410 "Metal ion SLC transporters" CFLO003136-PA 5 Reactome: R-HSA-5632684;Reactome: R-HSA-5610787;Reactome: R-HSA-5620922;Reactome: R-HSA-373080;Reactome: R-HSA-5635838 "Hedgehog 'on' state";"Hedgehog 'off' state";"BBSome-mediated cargo-targeting to cilium";"Class B/2 (Secretin family receptors)";"Activation of SMO" CFLO005131-PA 12 MetaCyc: PWY-6142;MetaCyc: PWY-1042;KEGG: 00710+4.1.2.13;MetaCyc: PWY-7385;MetaCyc: PWY-5484;KEGG: 00680+4.1.2.13;KEGG: 00010+4.1.2.13;Reactome: R-HSA-70263;KEGG: 00051+4.1.2.13;MetaCyc: PWY-1861;Reactome: R-HSA-70171;KEGG: 00030+4.1.2.13 "Gluconeogenesis II (Methanobacterium thermoautotrophicum)";"Glycolysis IV (plant cytosol)";"Carbon fixation in photosynthetic organisms";"1,3-propanediol biosynthesis (engineered)";"Glycolysis II (from fructose 6-phosphate)";"Methane metabolism";"Glycolysis / Gluconeogenesis";"Gluconeogenesis";"Fructose and mannose metabolism";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"Glycolysis";"Pentose phosphate pathway" CFLO012576-PA 7 MetaCyc: PWY-5921;KEGG: 00220+3.5.1.2;Reactome: R-HSA-8964539;KEGG: 00250+3.5.1.2;Reactome: R-HSA-210500;KEGG: 00471+3.5.1.2;Reactome: R-HSA-5628897 "Glutaminyl-trnagln biosynthesis via transamidation";"Arginine biosynthesis";"Glutamate and glutamine metabolism";"Alanine, aspartate and glutamate metabolism";"Glutamate Neurotransmitter Release Cycle";"D-Glutamine and D-glutamate metabolism";"TP53 Regulates Metabolic Genes" CFLO007821-PA 2 Reactome: R-HSA-5205685;Reactome: R-HSA-1268020 "Pink/Parkin Mediated Mitophagy";"Mitochondrial protein import" CFLO019675-PA 1 KEGG: 00970+6.1.1.3 "Aminoacyl-tRNA biosynthesis" CFLO016634-PA 1 Reactome: R-HSA-3299685 "Detoxification of Reactive Oxygen Species" CFLO005276-PA 1 Reactome: R-HSA-389661 "Glyoxylate metabolism and glycine degradation" CFLO001597-PA 2 MetaCyc: PWY-6749;KEGG: 00520+5.4.2.10 "CMP-legionaminate biosynthesis I";"Amino sugar and nucleotide sugar metabolism" CFLO018832-PA 1 Reactome: R-HSA-373752 "Netrin-1 signaling" CFLO005957-PA 1 Reactome: R-HSA-6799198 "Complex I biogenesis" CFLO012312-PA 9 Reactome: R-HSA-3560801;Reactome: R-HSA-975634;Reactome: R-HSA-3656237;Reactome: R-HSA-2024096;Reactome: R-HSA-3560783;Reactome: R-HSA-4420332;Reactome: R-HSA-3656253;Reactome: R-HSA-2022928;Reactome: R-HSA-1971475 "Defective B3GAT3 causes JDSSDHD";"Retinoid metabolism and transport";"Defective EXT2 causes exostoses 2";"HS-GAG degradation";"Defective B4GALT7 causes EDS, progeroid type";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"HS-GAG biosynthesis";"A tetrasaccharide linker sequence is required for GAG synthesis" CFLO004020-PA 1 Reactome: R-HSA-2514853 "Condensation of Prometaphase Chromosomes" CFLO003254-PA 4 KEGG: 00260+1.2.1.8+1.1.99.1;MetaCyc: PWY-7494;Reactome: R-HSA-6798163;MetaCyc: PWY-3722 "Glycine, serine and threonine metabolism";"Choline degradation IV";"Choline catabolism";"Glycine betaine biosynthesis II (Gram-positive bacteria)" CFLO005931-PA 1 Reactome: R-HSA-2022377 "Metabolism of Angiotensinogen to Angiotensins" CFLO009651-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO000326-PA 13 Reactome: R-HSA-9633012;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-2408557;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339;Reactome: R-HSA-72764;Reactome: R-HSA-156827 "Response of EIF2AK4 (GCN2) to amino acid deficiency";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Selenocysteine synthesis";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO015256-PA 3 Reactome: R-HSA-6807878;Reactome: R-HSA-6811440;Reactome: R-HSA-6811438 "COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network";"Intra-Golgi traffic" CFLO006350-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO001065-PA 3 Reactome: R-HSA-212436;Reactome: R-HSA-1989781;Reactome: R-HSA-381340 "Generic Transcription Pathway";"PPARA activates gene expression";"Transcriptional regulation of white adipocyte differentiation" CFLO013467-PA 5 Reactome: R-HSA-9615710;Reactome: R-HSA-162588;Reactome: R-HSA-9610379;Reactome: R-HSA-174490;Reactome: R-HSA-917729 "Late endosomal microautophagy";"Budding and maturation of HIV virion";"HCMV Late Events";"Membrane binding and targetting of GAG proteins";"Endosomal Sorting Complex Required For Transport (ESCRT)" CFLO003190-PA 1 Reactome: R-HSA-6803157 "Antimicrobial peptides" CFLO000981-PA 2 KEGG: 00760+2.3.1.286;Reactome: R-HSA-2151201 "Nicotinate and nicotinamide metabolism";"Transcriptional activation of mitochondrial biogenesis" CFLO004766-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO003232-PA 3 MetaCyc: PWY-4261;Reactome: R-HSA-75109;KEGG: 00561+2.7.1.30 "Glycerol degradation I";"Triglyceride biosynthesis";"Glycerolipid metabolism" CFLO007501-PA 1 Reactome: R-HSA-2559584 "Formation of Senescence-Associated Heterochromatin Foci (SAHF)" CFLO006959-PA 2 KEGG: 00901+2.7.1.222;MetaCyc: PWY-7936 "Indole alkaloid biosynthesis";"Psilocybin biosynthesis" CFLO016516-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO007387-PA 13 KEGG: 00511+3.2.1.52;KEGG: 00604+3.2.1.52;MetaCyc: PWY-7883;MetaCyc: PWY-7822;MetaCyc: PWY-6902;KEGG: 00531+3.2.1.52;KEGG: 00513+3.2.1.52;Reactome: R-HSA-1660662;Reactome: R-HSA-2022857;Reactome: R-HSA-2024101;KEGG: 00603+3.2.1.52;KEGG: 00520+3.2.1.52;Reactome: R-HSA-2160916 "Other glycan degradation";"Glycosphingolipid biosynthesis - ganglio series";"Anhydromuropeptides recycling II";"Chitin degradation III (Serratia)";"Chitin degradation II (Vibrio)";"Glycosaminoglycan degradation";"Various types of N-glycan biosynthesis";"Glycosphingolipid metabolism";"Keratan sulfate degradation";"CS/DS degradation";"Glycosphingolipid biosynthesis - globo and isoglobo series";"Amino sugar and nucleotide sugar metabolism";"Hyaluronan uptake and degradation" CFLO019476-PA 11 Reactome: R-HSA-202733;Reactome: R-HSA-4420332;Reactome: R-HSA-3656253;Reactome: R-HSA-2022928;Reactome: R-HSA-1971475;Reactome: R-HSA-3000170;Reactome: R-HSA-3560801;Reactome: R-HSA-975634;Reactome: R-HSA-3656237;Reactome: R-HSA-2024096;Reactome: R-HSA-3560783 "Cell surface interactions at the vascular wall";"Defective B3GALT6 causes EDSP2 and SEMDJL1";"Defective EXT1 causes exostoses 1, TRPS2 and CHDS";"HS-GAG biosynthesis";"A tetrasaccharide linker sequence is required for GAG synthesis";"Syndecan interactions";"Defective B3GAT3 causes JDSSDHD";"Retinoid metabolism and transport";"Defective EXT2 causes exostoses 2";"HS-GAG degradation";"Defective B4GALT7 causes EDS, progeroid type" CFLO019189-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO004405-PA 16 Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-192823;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827 "Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Peptide chain elongation";"Translation initiation complex formation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Viral mRNA Translation";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression" CFLO017809-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO019059-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO000956-PA 3 MetaCyc: PWY-7833;Reactome: R-HSA-9033807;MetaCyc: PWY-7831 "Biosynthesis of Lewis epitopes (H. pylori)";"ABO blood group biosynthesis";"ABH and Lewis epitopes biosynthesis from type 2 precursor disaccharide" CFLO008929-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO001401-PA 1 Reactome: R-HSA-75105 "Fatty acyl-CoA biosynthesis" CFLO004702-PA 1 Reactome: R-HSA-6811440 "Retrograde transport at the Trans-Golgi-Network" CFLO011199-PA 1 Reactome: R-HSA-5662702 "Melanin biosynthesis" CFLO014479-PA 8 MetaCyc: PWY-7511;Reactome: R-HSA-3108214;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-72706 "Protein ubiquitination";"SUMOylation of DNA damage response and repair proteins";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO008267-PA 2 Reactome: R-HSA-1483148;Reactome: R-HSA-1483166 "Synthesis of PG";"Synthesis of PA" CFLO012586-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-6790901 "Major pathway of rRNA processing in the nucleolus and cytosol";"rRNA modification in the nucleus and cytosol" CFLO018839-PA 13 Reactome: R-HSA-2408557;Reactome: R-HSA-9633012;Reactome: R-HSA-192823;Reactome: R-HSA-975957;Reactome: R-HSA-6791226;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-975956;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156902;Reactome: R-HSA-156827;Reactome: R-HSA-72764 "Selenocysteine synthesis";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Viral mRNA Translation";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Major pathway of rRNA processing in the nucleolus and cytosol";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"Peptide chain elongation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Eukaryotic Translation Termination" CFLO010492-PA 15 Reactome: R-HSA-179409;Reactome: R-HSA-2559582;Reactome: R-HSA-174084;Reactome: R-HSA-174048;Reactome: R-HSA-176407;Reactome: R-HSA-174184;Reactome: R-HSA-174154;Reactome: R-HSA-176408;Reactome: R-HSA-69017;Reactome: R-HSA-141430;Reactome: R-HSA-8853884;Reactome: R-HSA-176412;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-174178 "APC-Cdc20 mediated degradation of Nek2A";"Senescence-Associated Secretory Phenotype (SASP)";"Autodegradation of Cdh1 by Cdh1:APC/C";"APC/C:Cdc20 mediated degradation of Cyclin B";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Securin";"Regulation of APC/C activators between G1/S and early anaphase";"CDK-mediated phosphorylation and removal of Cdc6";"Inactivation of APC/C via direct inhibition of the APC/C complex";"Transcriptional Regulation by VENTX";"Phosphorylation of the APC/C";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1" CFLO013233-PA 3 MetaCyc: PWY-6807;KEGG: 00511+3.2.1.51;Reactome: R-HSA-6798695 "Xyloglucan degradation II (exoglucanase)";"Other glycan degradation";"Neutrophil degranulation" CFLO008802-PA 3 KEGG: 00510+2.4.1.117;Reactome: R-HSA-913709;Reactome: R-HSA-480985 "N-Glycan biosynthesis";"O-linked glycosylation of mucins";"Synthesis of dolichyl-phosphate-glucose" CFLO000118-PA 8 MetaCyc: PWY-5723;MetaCyc: PWY-1861;Reactome: R-HSA-6791055;Reactome: R-HSA-71336;Reactome: R-HSA-163754;Reactome: R-HSA-6791462;KEGG: 00030+2.2.1.2;Reactome: R-HSA-8950505 "Rubisco shunt";"Formaldehyde assimilation II (assimilatory RuMP Cycle)";"TALDO1 deficiency: failed conversion of SH7P, GA3P to Fru(6)P, E4P";"Pentose phosphate pathway";"Insulin effects increased synthesis of Xylulose-5-Phosphate";"TALDO1 deficiency: failed conversion of Fru(6)P, E4P to SH7P, GA3P";"Pentose phosphate pathway";"Gene and protein expression by JAK-STAT signaling after Interleukin-12 stimulation" CFLO011197-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO000589-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO008047-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO009316-PA 2 Reactome: R-HSA-163210;Reactome: R-HSA-8949613 "Formation of ATP by chemiosmotic coupling";"Cristae formation" CFLO000270-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO001386-PA 1 Reactome: R-HSA-9037629 "Lewis blood group biosynthesis" CFLO010192-PA 1 Reactome: R-HSA-1632852 "Macroautophagy" CFLO001646-PA 9 Reactome: R-HSA-9648025;Reactome: R-HSA-141444;Reactome: R-HSA-2467813;Reactome: R-HSA-2500257;Reactome: R-HSA-1989781;Reactome: R-HSA-68877;Reactome: R-HSA-381340;Reactome: R-HSA-5663220;Reactome: R-HSA-212436 "EML4 and NUDC in mitotic spindle formation";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Separation of Sister Chromatids";"Resolution of Sister Chromatid Cohesion";"PPARA activates gene expression";"Mitotic Prometaphase";"Transcriptional regulation of white adipocyte differentiation";"RHO GTPases Activate Formins";"Generic Transcription Pathway" CFLO011966-PA 7 Reactome: R-HSA-500753;MetaCyc: PWY-7790;KEGG: 00250+2.1.3.2;KEGG: 00240+2.1.3.2;MetaCyc: PWY-7791;KEGG: 00240+3.5.2.3;MetaCyc: PWY-5686 "Pyrimidine biosynthesis";"UMP biosynthesis II";"Alanine, aspartate and glutamate metabolism";"Pyrimidine metabolism";"UMP biosynthesis III";"Pyrimidine metabolism";"UMP biosynthesis I" CFLO004607-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" CFLO011800-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO008829-PA 6 Reactome: R-HSA-72702;Reactome: R-HSA-72689;Reactome: R-HSA-72649;Reactome: R-HSA-156827;Reactome: R-HSA-72695;Reactome: R-HSA-72706 "Ribosomal scanning and start codon recognition";"Formation of a pool of free 40S subunits";"Translation initiation complex formation";"L13a-mediated translational silencing of Ceruloplasmin expression";"Formation of the ternary complex, and subsequently, the 43S complex";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO001253-PA 1 Reactome: R-HSA-176974 "Unwinding of DNA" CFLO009870-PA 2 Reactome: R-HSA-6811434;Reactome: R-HSA-983189 "COPI-dependent Golgi-to-ER retrograde traffic";"Kinesins" CFLO014205-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO003256-PA 1 Reactome: R-HSA-6798163 "Choline catabolism" CFLO001481-PA 3 Reactome: R-HSA-1989781;Reactome: R-HSA-212436;Reactome: R-HSA-381340 "PPARA activates gene expression";"Generic Transcription Pathway";"Transcriptional regulation of white adipocyte differentiation" CFLO009327-PA 2 Reactome: R-HSA-3295583;Reactome: R-HSA-418890 "TRP channels";"Role of second messengers in netrin-1 signaling" CFLO017924-PA 1 Reactome: R-HSA-1268020 "Mitochondrial protein import" CFLO001963-PA 3 MetaCyc: PWY-7286;MetaCyc: PWY-6829;MetaCyc: PWY-7285 "7-(3-amino-3-carboxypropyl)-wyosine biosynthesis";"Trna methylation (yeast)";"Methylwyosine biosynthesis" CFLO004135-PA 2 Reactome: R-HSA-1660662;Reactome: R-HSA-390471 "Glycosphingolipid metabolism";"Association of TriC/CCT with target proteins during biosynthesis" CFLO011254-PA 2 Reactome: R-HSA-3214858;Reactome: R-HSA-8939243 "RMTs methylate histone arginines";"RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known" CFLO002107-PA 1 Reactome: R-HSA-5576886 "Phase 4 - resting membrane potential" CFLO019015-PA 6 Reactome: R-HSA-450604;Reactome: R-HSA-380994;Reactome: R-HSA-450385;Reactome: R-HSA-6791226;Reactome: R-HSA-429958;Reactome: R-HSA-450513 "KSRP (KHSRP) binds and destabilizes mRNA";"ATF4 activates genes in response to endoplasmic reticulum stress";"Butyrate Response Factor 1 (BRF1) binds and destabilizes mRNA";"Major pathway of rRNA processing in the nucleolus and cytosol";"mRNA decay by 3' to 5' exoribonuclease";"Tristetraprolin (TTP, ZFP36) binds and destabilizes mRNA" CFLO019213-PA 1 Reactome: R-HSA-383280 "Nuclear Receptor transcription pathway" CFLO005584-PA 16 Reactome: R-HSA-141430;Reactome: R-HSA-8853884;Reactome: R-HSA-176409;Reactome: R-HSA-2467813;Reactome: R-HSA-176412;Reactome: R-HSA-174178;Reactome: R-HSA-179409;Reactome: R-HSA-983168;Reactome: R-HSA-176407;Reactome: R-HSA-174154;Reactome: R-HSA-2559582;Reactome: R-HSA-174084;Reactome: R-HSA-174184;Reactome: R-HSA-174048;Reactome: R-HSA-176408;Reactome: R-HSA-69017 "Inactivation of APC/C via direct inhibition of the APC/C complex";"Transcriptional Regulation by VENTX";"APC/C:Cdc20 mediated degradation of mitotic proteins";"Separation of Sister Chromatids";"Phosphorylation of the APC/C";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"APC-Cdc20 mediated degradation of Nek2A";"Antigen processing: Ubiquitination & Proteasome degradation";"Conversion from APC/C:Cdc20 to APC/C:Cdh1 in late anaphase";"APC/C:Cdc20 mediated degradation of Securin";"Senescence-Associated Secretory Phenotype (SASP)";"Autodegradation of Cdh1 by Cdh1:APC/C";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"APC/C:Cdc20 mediated degradation of Cyclin B";"Regulation of APC/C activators between G1/S and early anaphase";"CDK-mediated phosphorylation and removal of Cdc6" CFLO002821-PA 3 Reactome: R-HSA-3000157;Reactome: R-HSA-8874081;Reactome: R-HSA-3000171 "Laminin interactions";"MET activates PTK2 signaling";"Non-integrin membrane-ECM interactions" CFLO009992-PA 12 KEGG: 00052+2.7.7.9;KEGG: 00500+2.7.7.9;KEGG: 00520+2.7.7.9;Reactome: R-HSA-3322077;MetaCyc: PWY-3801;MetaCyc: PWY-7817;KEGG: 00561+2.7.7.9;MetaCyc: PWY-7343;MetaCyc: PWY-7238;MetaCyc: PWY-6527;Reactome: R-HSA-173599;KEGG: 00040+2.7.7.9 "Galactose metabolism";"Starch and sucrose metabolism";"Amino sugar and nucleotide sugar metabolism";"Glycogen synthesis";"Sucrose degradation II (sucrose synthase)";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerolipid metabolism";"UDP-alpha-D-glucose biosynthesis I";"Sucrose biosynthesis II";"Stachyose degradation";"Formation of the active cofactor, UDP-glucuronate";"Pentose and glucuronate interconversions" CFLO012013-PA 3 Reactome: R-HSA-8868766;Reactome: R-HSA-6785470;Reactome: R-HSA-6784531 "rRNA processing in the mitochondrion";"tRNA processing in the mitochondrion";"tRNA processing in the nucleus" CFLO003281-PA 1 Reactome: R-HSA-3214842 "HDMs demethylate histones" CFLO000223-PA 5 Reactome: R-HSA-111447;Reactome: R-HSA-5625740;Reactome: R-HSA-1445148;Reactome: R-HSA-5628897;Reactome: R-HSA-75035 "Activation of BAD and translocation to mitochondria";"RHO GTPases activate PKNs";"Translocation of SLC2A4 (GLUT4) to the plasma membrane";"TP53 Regulates Metabolic Genes";"Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex" CFLO001352-PA 7 Reactome: R-HSA-2467813;Reactome: R-HSA-1221632;Reactome: R-HSA-2500257;Reactome: R-HSA-2470946;Reactome: R-HSA-9018519;Reactome: R-HSA-2468052;Reactome: R-HSA-3108214 "Separation of Sister Chromatids";"Meiotic synapsis";"Resolution of Sister Chromatid Cohesion";"Cohesin Loading onto Chromatin";"Estrogen-dependent gene expression";"Establishment of Sister Chromatid Cohesion";"SUMOylation of DNA damage response and repair proteins" CFLO005166-PA 1 Reactome: R-HSA-425561 "Sodium/Calcium exchangers" CFLO006738-PA 4 Reactome: R-HSA-201722;Reactome: R-HSA-2122947;Reactome: R-HSA-3769402;Reactome: R-HSA-4641265 "Formation of the beta-catenin:TCF transactivating complex";"NOTCH1 Intracellular Domain Regulates Transcription";"Deactivation of the beta-catenin transactivating complex";"Repression of WNT target genes" CFLO005116-PA 1 Reactome: R-HSA-1296072 "Voltage gated Potassium channels" CFLO015784-PA 3 MetaCyc: PWY-5067;KEGG: 00500+2.4.1.11;Reactome: R-HSA-3322077 "Glycogen biosynthesis II (from UDP-D-Glucose)";"Starch and sucrose metabolism";"Glycogen synthesis" CFLO007297-PA 2 Reactome: R-HSA-6799198;Reactome: R-HSA-611105 "Complex I biogenesis";"Respiratory electron transport" CFLO017345-PA 2 MetaCyc: PWY-7511;Reactome: R-HSA-983168 "Protein ubiquitination";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO003946-PA 1 Reactome: R-HSA-6784531 "tRNA processing in the nucleus" CFLO014059-PA 4 Reactome: R-HSA-77289;Reactome: R-HSA-611105;Reactome: R-HSA-389661;Reactome: R-HSA-6799198 "Mitochondrial Fatty Acid Beta-Oxidation";"Respiratory electron transport";"Glyoxylate metabolism and glycine degradation";"Complex I biogenesis" CFLO001346-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO004486-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO006287-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production" CFLO009303-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO000918-PA 13 Reactome: R-HSA-975956;Reactome: R-HSA-9010553;Reactome: R-HSA-72706;Reactome: R-HSA-6791226;Reactome: R-HSA-975957;Reactome: R-HSA-192823;Reactome: R-HSA-9633012;Reactome: R-HSA-2408557;Reactome: R-HSA-72764;Reactome: R-HSA-156827;Reactome: R-HSA-156902;Reactome: R-HSA-72689;Reactome: R-HSA-1799339 "Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Regulation of expression of SLITs and ROBOs";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Major pathway of rRNA processing in the nucleolus and cytosol";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Viral mRNA Translation";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Selenocysteine synthesis";"Eukaryotic Translation Termination";"L13a-mediated translational silencing of Ceruloplasmin expression";"Peptide chain elongation";"Formation of a pool of free 40S subunits";"SRP-dependent cotranslational protein targeting to membrane" CFLO001265-PA 1 Reactome: R-HSA-3214847 "HATs acetylate histones" CFLO008873-PA 10 Reactome: R-HSA-5693579;Reactome: R-HSA-5685938;Reactome: R-HSA-5685942;Reactome: R-HSA-5693607;Reactome: R-HSA-5693568;Reactome: R-HSA-5693554;Reactome: R-HSA-5693616;Reactome: R-HSA-912446;Reactome: R-HSA-69473;Reactome: R-HSA-6804756 "Homologous DNA Pairing and Strand Exchange";"HDR through Single Strand Annealing (SSA)";"HDR through Homologous Recombination (HRR)";"Processing of DNA double-strand break ends";"Resolution of D-loop Structures through Holliday Junction Intermediates";"Resolution of D-loop Structures through Synthesis-Dependent Strand Annealing (SDSA)";"Presynaptic phase of homologous DNA pairing and strand exchange";"Meiotic recombination";"G2/M DNA damage checkpoint";"Regulation of TP53 Activity through Phosphorylation" CFLO012495-PA 6 KEGG: 00190+7.1.2.2;Reactome: R-HSA-8949613;Reactome: R-HSA-1268020;Reactome: R-HSA-163210;KEGG: 00195+7.1.2.2;MetaCyc: PWY-7980 "Oxidative phosphorylation";"Cristae formation";"Mitochondrial protein import";"Formation of ATP by chemiosmotic coupling";"Photosynthesis";"ATP biosynthesis" CFLO014833-PA 33 Reactome: R-HSA-4085377;Reactome: R-HSA-2467813;Reactome: R-HSA-3371453;Reactome: R-HSA-1169408;Reactome: R-HSA-6784531;Reactome: R-HSA-3108214;Reactome: R-HSA-180746;Reactome: R-HSA-191859;Reactome: R-HSA-5663220;Reactome: R-HSA-180910;Reactome: R-HSA-168333;Reactome: R-HSA-159230;Reactome: R-HSA-159227;Reactome: R-HSA-5619107;Reactome: R-HSA-68877;Reactome: R-HSA-9609690;Reactome: R-HSA-4570464;Reactome: R-HSA-159236;Reactome: R-HSA-141444;Reactome: R-HSA-2500257;Reactome: R-HSA-168325;Reactome: R-HSA-9648025;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-5578749;Reactome: R-HSA-9610379;Reactome: R-HSA-3232142;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-159231;Reactome: R-HSA-4615885;Reactome: R-HSA-170822;Reactome: R-HSA-168276 "SUMOylation of SUMOylation proteins";"Separation of Sister Chromatids";"Regulation of HSF1-mediated heat shock response";"ISG15 antiviral mechanism";"tRNA processing in the nucleus";"SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein";"snRNP Assembly";"RHO GTPases Activate Formins";"Vpr-mediated nuclear import of PICs";"NEP/NS2 Interacts with the Cellular Export Machinery";"Transport of the SLBP Dependant Mature mRNA";"Transport of the SLBP independent Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Mitotic Prometaphase";"HCMV Early Events";"SUMOylation of RNA binding proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"Resolution of Sister Chromatid Cohesion";"Viral Messenger RNA Synthesis";"EML4 and NUDC in mitotic spindle formation";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"Transcriptional regulation by small RNAs";"HCMV Late Events";"SUMOylation of ubiquitinylation proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"Transport of Mature mRNA Derived from an Intronless Transcript";"SUMOylation of DNA replication proteins";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"NS1 Mediated Effects on Host Pathways" CFLO013732-PA 6 Reactome: R-HSA-72187;Reactome: R-HSA-159236;Reactome: R-HSA-975957;Reactome: R-HSA-73856;Reactome: R-HSA-9010553;Reactome: R-HSA-72163 "mRNA 3'-end processing";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"RNA Polymerase II Transcription Termination";"Regulation of expression of SLITs and ROBOs";"mRNA Splicing - Major Pathway" CFLO002602-PA 8 Reactome: R-HSA-176187;Reactome: R-HSA-68962;Reactome: R-HSA-68827;Reactome: R-HSA-68867;Reactome: R-HSA-113507;Reactome: R-HSA-68689;Reactome: R-HSA-68616;Reactome: R-HSA-68949 "Activation of ATR in response to replication stress";"Activation of the pre-replicative complex";"CDT1 association with the CDC6:ORC:origin complex";"Assembly of the pre-replicative complex";"E2F-enabled inhibition of pre-replication complex formation";"CDC6 association with the ORC:origin complex";"Assembly of the ORC complex at the origin of replication";"Orc1 removal from chromatin" CFLO004802-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO005526-PA 9 Reactome: R-HSA-1855204;MetaCyc: PWY-8052;MetaCyc: PWY-6351;MetaCyc: PWY-6367;Reactome: R-HSA-112043;KEGG: 04070+3.1.4.11;KEGG: 00562+3.1.4.11;Reactome: R-HSA-416476;MetaCyc: PWY-7039 "Synthesis of IP3 and IP4 in the cytosol";"2-arachidonoylglycerol biosynthesis";"D-myo-inositol (1,4,5)-trisphosphate biosynthesis";"D-myo-inositol-5-phosphate metabolism";"PLC beta mediated events";"Phosphatidylinositol signaling system";"Inositol phosphate metabolism";"G alpha (q) signalling events";"Phosphatidate metabolism, as a signaling molecule" CFLO001484-PA 6 Reactome: R-HSA-9609690;Reactome: R-HSA-1989781;Reactome: R-HSA-9022692;Reactome: R-HSA-9022537;Reactome: R-HSA-3214815;Reactome: R-HSA-9029569 "HCMV Early Events";"PPARA activates gene expression";"Regulation of MECP2 expression and activity";"Loss of MECP2 binding ability to the NCoR/SMRT complex";"HDACs deacetylate histones";"NR1H3 & NR1H2 regulate gene expression linked to cholesterol transport and efflux" CFLO018240-PA 3 Reactome: R-HSA-193648;Reactome: R-HSA-416482;Reactome: R-HSA-194840 "NRAGE signals death through JNK";"G alpha (12/13) signalling events";"Rho GTPase cycle" CFLO014870-PA 1 Reactome: R-HSA-390522 "Striated Muscle Contraction" CFLO004449-PA 1 Reactome: R-HSA-432720 "Lysosome Vesicle Biogenesis" CFLO006961-PA 2 MetaCyc: PWY-7936;KEGG: 00901+2.7.1.222 "Psilocybin biosynthesis";"Indole alkaloid biosynthesis" CFLO019085-PA 2 Reactome: R-HSA-6783310;Reactome: R-HSA-6796648 "Fanconi Anemia Pathway";"TP53 Regulates Transcription of DNA Repair Genes" CFLO010536-PA 4 Reactome: R-HSA-196108;Reactome: R-HSA-2395516;Reactome: R-HSA-5579026;Reactome: R-HSA-211976 "Pregnenolone biosynthesis";"Electron transport from NADPH to Ferredoxin";"Defective CYP11A1 causes Adrenal insufficiency, congenital, with 46,XY sex reversal (AICSR)";"Endogenous sterols" CFLO004172-PA 1 Reactome: R-HSA-211897 "Cytochrome P450 - arranged by substrate type" CFLO013394-PA 5 Reactome: R-HSA-196757;KEGG: 00670+1.5.1.20;KEGG: 00720+1.5.1.20;MetaCyc: PWY-2201;MetaCyc: PWY-3841 "Metabolism of folate and pterines";"One carbon pool by folate";"Carbon fixation pathways in prokaryotes";"Folate transformations I";"Folate transformations II (plants)" CFLO007984-PA 3 Reactome: R-HSA-2408522;Reactome: R-HSA-379716;KEGG: 00970+6.1.1.20 "Selenoamino acid metabolism";"Cytosolic tRNA aminoacylation";"Aminoacyl-tRNA biosynthesis" CFLO017985-PA 1 Reactome: R-HSA-1474228 "Degradation of the extracellular matrix" CFLO002332-PA 2 Reactome: R-HSA-5694530;Reactome: R-HSA-204005 "Cargo concentration in the ER";"COPII-mediated vesicle transport" CFLO007386-PA 3 Reactome: R-HSA-381340;Reactome: R-HSA-1989781;Reactome: R-HSA-212436 "Transcriptional regulation of white adipocyte differentiation";"PPARA activates gene expression";"Generic Transcription Pathway" CFLO007963-PA 2 Reactome: R-HSA-72163;Reactome: R-HSA-6807505 "mRNA Splicing - Major Pathway";"RNA polymerase II transcribes snRNA genes" CFLO015943-PA 2 Reactome: R-HSA-418594;Reactome: R-HSA-6814122 "G alpha (i) signalling events";"Cooperation of PDCL (PhLP1) and TRiC/CCT in G-protein beta folding" CFLO004113-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO012406-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO011956-PA 3 Reactome: R-HSA-5419276;Reactome: R-HSA-5368286;Reactome: R-HSA-5389840 "Mitochondrial translation termination";"Mitochondrial translation initiation";"Mitochondrial translation elongation" CFLO000074-PA 9 Reactome: R-HSA-73779;Reactome: R-HSA-73776;Reactome: R-HSA-674695;Reactome: R-HSA-76042;Reactome: R-HSA-167161;Reactome: R-HSA-167172;Reactome: R-HSA-6804756;Reactome: R-HSA-75953;Reactome: R-HSA-167162 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"HIV Transcription Initiation";"Transcription of the HIV genome";"Regulation of TP53 Activity through Phosphorylation";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape" CFLO000616-PA 1 Reactome: R-HSA-606279 "Deposition of new CENPA-containing nucleosomes at the centromere" CFLO003398-PA 6 KEGG: 00780+6.3.4.15;MetaCyc: PWY-7382;MetaCyc: PWY-6987;Reactome: R-HSA-3371599;Reactome: R-HSA-196780;KEGG: 00785+2.3.1.181 "Biotin metabolism";"Lipoate biosynthesis and incorporation IV (yeast)";"Lipoate biosynthesis and incorporation III (Bacillus)";"Defective HLCS causes multiple carboxylase deficiency";"Biotin transport and metabolism";"Lipoic acid metabolism" CFLO008157-PA 6 MetaCyc: PWY-7782;KEGG: 00073+1.2.1.84;Reactome: R-HSA-9640463;MetaCyc: PWY-6733;MetaCyc: PWY-5884;MetaCyc: PWY-7656 "Plasmalogen biosynthesis";"Cutin, suberine and wax biosynthesis";"Wax biosynthesis";"Sporopollenin precursors biosynthesis";"Wax esters biosynthesis I";"Spodoptera littoralis pheromone biosynthesis" CFLO000029-PA 1 Reactome: R-HSA-1369062 "ABC transporters in lipid homeostasis" CFLO008280-PA 2 Reactome: R-HSA-1799339;Reactome: R-HSA-381038 "SRP-dependent cotranslational protein targeting to membrane";"XBP1(S) activates chaperone genes" CFLO013105-PA 1 KEGG: 04660+2.7.10.2 "T cell receptor signaling pathway" CFLO010617-PA 5 Reactome: R-HSA-5675221;Reactome: R-HSA-5673000;Reactome: R-HSA-6802955;Reactome: R-HSA-9649948;Reactome: R-HSA-6802946 "Negative regulation of MAPK pathway";"RAF activation";"Paradoxical activation of RAF signaling by kinase inactive BRAF";"Signaling downstream of RAS mutants";"Signaling by moderate kinase activity BRAF mutants" CFLO006499-PA 2 Reactome: R-HSA-446193;Reactome: R-HSA-4549349 "Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein";"Defective ALG2 causes ALG2-CDG (CDG-1i)" CFLO003956-PA 2 Reactome: R-HSA-445355;Reactome: R-HSA-390522 "Smooth Muscle Contraction";"Striated Muscle Contraction" CFLO011010-PA 1 KEGG: 00230+4.6.1.2 "Purine metabolism" CFLO004381-PA 1 Reactome: R-HSA-936837 "Ion transport by P-type ATPases" CFLO010053-PA 1 Reactome: R-HSA-5620912 "Anchoring of the basal body to the plasma membrane" CFLO009735-PA 2 Reactome: R-HSA-171319;Reactome: R-HSA-6790901 "Telomere Extension By Telomerase";"rRNA modification in the nucleus and cytosol" CFLO003317-PA 3 Reactome: R-HSA-983168;MetaCyc: PWY-7511;Reactome: R-HSA-6798695 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination";"Neutrophil degranulation" CFLO006171-PA 4 Reactome: R-HSA-8951664;Reactome: R-HSA-5696394;Reactome: R-HSA-6781823;Reactome: R-HSA-8856825 "Neddylation";"DNA Damage Recognition in GG-NER";"Formation of TC-NER Pre-Incision Complex";"Cargo recognition for clathrin-mediated endocytosis" CFLO019183-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO014990-PA 3 Reactome: R-HSA-1660514;Reactome: R-HSA-1660516;Reactome: R-HSA-1660517 "Synthesis of PIPs at the Golgi membrane";"Synthesis of PIPs at the early endosome membrane";"Synthesis of PIPs at the late endosome membrane" CFLO013520-PA 1 Reactome: R-HSA-2672351 "Stimuli-sensing channels" CFLO015411-PA 1 Reactome: R-HSA-420499 "Class C/3 (Metabotropic glutamate/pheromone receptors)" CFLO011982-PA 3 Reactome: R-HSA-5389840;Reactome: R-HSA-5368286;Reactome: R-HSA-5419276 "Mitochondrial translation elongation";"Mitochondrial translation initiation";"Mitochondrial translation termination" CFLO007370-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO015159-PA 2 Reactome: R-HSA-380320;Reactome: R-HSA-380270 "Recruitment of NuMA to mitotic centrosomes";"Recruitment of mitotic centrosome proteins and complexes" CFLO013001-PA 1 Reactome: R-HSA-162710 "Synthesis of glycosylphosphatidylinositol (GPI)" CFLO012680-PA 2 Reactome: R-HSA-427413;Reactome: R-HSA-3214815 "NoRC negatively regulates rRNA expression";"HDACs deacetylate histones" CFLO001735-PA 1 Reactome: R-HSA-1296052 "Ca2+ activated K+ channels" CFLO003969-PA 6 Reactome: R-HSA-977347;KEGG: 00270+2.6.1.52;KEGG: 00750+2.6.1.52;KEGG: 00260+2.6.1.52;MetaCyc: PWY-8010;KEGG: 00680+2.6.1.52 "Serine biosynthesis";"Cysteine and methionine metabolism";"Vitamin B6 metabolism";"Glycine, serine and threonine metabolism";"L-cysteine biosynthesis IX (Trichomonas vaginalis)";"Methane metabolism" CFLO005699-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO011593-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO019709-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO006254-PA 1 Reactome: R-HSA-1799339 "SRP-dependent cotranslational protein targeting to membrane" CFLO016177-PA 1 Reactome: R-HSA-400253 "Circadian Clock" CFLO012038-PA 1 Reactome: R-HSA-189085 "Digestion of dietary carbohydrate" CFLO008042-PA 42 Reactome: R-HSA-4551638;Reactome: R-HSA-2299718;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236;Reactome: R-HSA-606279;Reactome: R-HSA-73728;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-110330;Reactome: R-HSA-3214842;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-9610379;Reactome: R-HSA-5578749;Reactome: R-HSA-201722;Reactome: R-HSA-3214841;Reactome: R-HSA-3214847;Reactome: R-HSA-110331;Reactome: R-HSA-977225;Reactome: R-HSA-3214858;Reactome: R-HSA-1912408;Reactome: R-HSA-9616222;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-73772;Reactome: R-HSA-427389;Reactome: R-HSA-912446;Reactome: R-HSA-5693571;Reactome: R-HSA-427413;Reactome: R-HSA-2559580;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-427359;Reactome: R-HSA-69473 "SUMOylation of chromatin organization proteins";"Condensation of Prophase Chromosomes";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Deposition of new CENPA-containing nucleosomes at the centromere";"RNA Polymerase I Promoter Opening";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"Recognition and association of DNA glycosylase with site containing an affected purine";"HDMs demethylate histones";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"HCMV Late Events";"Transcriptional regulation by small RNAs";"Formation of the beta-catenin:TCF transactivating complex";"PKMTs methylate histone lysines";"HATs acetylate histones";"Cleavage of the damaged purine";"Amyloid fiber formation";"RMTs methylate histone arginines";"Pre-NOTCH Transcription and Translation";"Transcriptional regulation of granulopoiesis";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Packaging Of Telomere Ends";"HCMV Early Events";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"RNA Polymerase I Promoter Escape";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"Meiotic recombination";"Nonhomologous End-Joining (NHEJ)";"NoRC negatively regulates rRNA expression";"Oxidative Stress Induced Senescence";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"SIRT1 negatively regulates rRNA expression";"G2/M DNA damage checkpoint" CFLO015399-PA 1 KEGG: 00270+2.1.1.37 "Cysteine and methionine metabolism" CFLO002764-PA 7 Reactome: R-HSA-69202;Reactome: R-HSA-69656;Reactome: R-HSA-1362277;Reactome: R-HSA-69205;Reactome: R-HSA-1538133;Reactome: R-HSA-1362300;Reactome: R-HSA-156711 "Cyclin E associated events during G1/S transition";"Cyclin A:Cdk2-associated events at S phase entry";"Transcription of E2F targets under negative control by DREAM complex";"G1/S-Specific Transcription";"G0 and Early G1";"Transcription of E2F targets under negative control by p107 (RBL1) and p130 (RBL2) in complex with HDAC1";"Polo-like kinase mediated events" CFLO008922-PA 3 Reactome: R-HSA-6811438;Reactome: R-HSA-6807878;Reactome: R-HSA-6811440 "Intra-Golgi traffic";"COPI-mediated anterograde transport";"Retrograde transport at the Trans-Golgi-Network" CFLO019810-PA 14 Reactome: R-HSA-5656121;Reactome: R-HSA-110320;Reactome: R-HSA-5651801;Reactome: R-HSA-69091;Reactome: R-HSA-110312;Reactome: R-HSA-5655862;Reactome: R-HSA-5696400;Reactome: R-HSA-5656169;Reactome: R-HSA-174411;Reactome: R-HSA-6782135;Reactome: R-HSA-5696397;Reactome: R-HSA-5685942;Reactome: R-HSA-110314;Reactome: R-HSA-6782210 "Translesion synthesis by POLI";"Translesion Synthesis by POLH";"PCNA-Dependent Long Patch Base Excision Repair";"Polymerase switching";"Translesion synthesis by REV1";"Translesion synthesis by POLK";"Dual Incision in GG-NER";"Termination of translesion DNA synthesis";"Polymerase switching on the C-strand of the telomere";"Dual incision in TC-NER";"Gap-filling DNA repair synthesis and ligation in GG-NER";"HDR through Homologous Recombination (HRR)";"Recognition of DNA damage by PCNA-containing replication complex";"Gap-filling DNA repair synthesis and ligation in TC-NER" CFLO013930-PA 3 Reactome: R-HSA-2029482;Reactome: R-HSA-5663213;Reactome: R-HSA-3928662 "Regulation of actin dynamics for phagocytic cup formation";"RHO GTPases Activate WASPs and WAVEs";"EPHB-mediated forward signaling" CFLO005942-PA 2 KEGG: 00230+2.7.4.8;MetaCyc: PWY-7221 "Purine metabolism";"Guanosine ribonucleotides de novo biosynthesis" CFLO005634-PA 1 Reactome: R-HSA-2132295 "MHC class II antigen presentation" CFLO009975-PA 3 Reactome: R-HSA-6811440;Reactome: R-HSA-8876198;Reactome: R-HSA-6811438 "Retrograde transport at the Trans-Golgi-Network";"RAB GEFs exchange GTP for GDP on RABs";"Intra-Golgi traffic" CFLO004326-PA 6 Reactome: R-HSA-72163;Reactome: R-HSA-111367;Reactome: R-HSA-77588;Reactome: R-HSA-73856;Reactome: R-HSA-191859;Reactome: R-HSA-72165 "mRNA Splicing - Major Pathway";"SLBP independent Processing of Histone Pre-mRNAs";"SLBP Dependent Processing of Replication-Dependent Histone Pre-mRNAs";"RNA Polymerase II Transcription Termination";"snRNP Assembly";"mRNA Splicing - Minor Pathway" CFLO002671-PA 1 Reactome: R-HSA-197264 "Nicotinamide salvaging" CFLO006701-PA 22 MetaCyc: PWY-7049;MetaCyc: PWY-5353;MetaCyc: PWY-6433;MetaCyc: PWY-7606;MetaCyc: PWY-8041;MetaCyc: PWY-7725;MetaCyc: PWY-7601;MetaCyc: PWY-7602;MetaCyc: PWY-5080;MetaCyc: PWY-7724;MetaCyc: PWY-7592;KEGG: 00062+4.2.1.134;MetaCyc: PWY-7035;MetaCyc: PWY-7726;MetaCyc: PWY-6958;MetaCyc: PWY-7053;Reactome: R-HSA-75876;MetaCyc: PWY-7727;MetaCyc: PWY-7728;MetaCyc: PWY-7619;MetaCyc: PWY-7036;MetaCyc: PWY-6598 "Icosapentaenoate biosynthesis II (6-desaturase, mammals)";"Arachidonate biosynthesis I (6-desaturase, lower eukaryotes)";"Hydroxylated fatty acid biosynthesis (plants)";"Docosahexaenoate biosynthesis III (6-desaturase, mammals)";"Ultra-long-chain fatty acid biosynthesis";"Arachidonate biosynthesis V (8-detaturase, mammals)";"Arachidonate biosynthesis IV (8-detaturase, lower eukaryotes)";"Icosapentaenoate biosynthesis V (8-desaturase, lower eukaryotes)";"Very long chain fatty acid biosynthesis I";"Icosapentaenoate biosynthesis III (8-desaturase, mammals)";"Arachidonate biosynthesis III (6-desaturase, mammals)";"Fatty acid elongation";"(9Z)-tricosene biosynthesis";"(4Z,7Z,10Z,13Z,16Z)-docosapentaenoate biosynthesis (6-desaturase)";"Icosapentaenoate biosynthesis I (lower eukaryotes)";"Docosahexaenoate biosynthesis I (lower eukaryotes)";"Synthesis of very long-chain fatty acyl-CoAs";"Docosahexaenoate biosynthesis IV (4-desaturase, mammals)";"(4Z,7Z,10Z,13Z,16Z)-docosa-4,7,10,13,16-pentaenoate biosynthesis II (4-desaturase)";"Juniperonate biosynthesis";"Very long chain fatty acid biosynthesis II";"Sciadonate biosynthesis" CFLO009307-PA 5 MetaCyc: PWY-6122;Reactome: R-HSA-73817;KEGG: 00230+6.3.5.3;MetaCyc: PWY-6277;MetaCyc: PWY-6121 "5-aminoimidazole ribonucleotide biosynthesis II";"Purine ribonucleoside monophosphate biosynthesis";"Purine metabolism";"Superpathway of 5-aminoimidazole ribonucleotide biosynthesis";"5-aminoimidazole ribonucleotide biosynthesis I" CFLO015432-PA 2 Reactome: R-HSA-5620924;Reactome: R-HSA-5610787 "Intraflagellar transport";"Hedgehog 'off' state" CFLO015653-PA 1 Reactome: R-HSA-72163 "mRNA Splicing - Major Pathway" CFLO013735-PA 1 Reactome: R-HSA-5620924 "Intraflagellar transport" CFLO015916-PA 22 Reactome: R-HSA-5358752;Reactome: R-HSA-5358749;Reactome: R-HSA-4641262;Reactome: R-HSA-5467337;Reactome: R-HSA-5467348;Reactome: R-HSA-5467340;Reactome: R-HSA-195253;Reactome: R-HSA-68877;Reactome: R-HSA-2467813;Reactome: R-HSA-5675221;Reactome: R-HSA-141444;Reactome: R-HSA-5673000;Reactome: R-HSA-2500257;Reactome: R-HSA-432142;Reactome: R-HSA-5358747;Reactome: R-HSA-6811558;Reactome: R-HSA-5339716;Reactome: R-HSA-9648025;Reactome: R-HSA-389513;Reactome: R-HSA-5663220;Reactome: R-HSA-196299;Reactome: R-HSA-5358751 "T41 mutants of beta-catenin aren't phosphorylated";"S37 mutants of beta-catenin aren't phosphorylated";"Disassembly of the destruction complex and recruitment of AXIN to the membrane";"APC truncation mutants have impaired AXIN binding";"Truncations of AMER1 destabilize the destruction complex";"AXIN missense mutants destabilize the destruction complex";"Degradation of beta-catenin by the destruction complex";"Mitotic Prometaphase";"Separation of Sister Chromatids";"Negative regulation of MAPK pathway";"Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal";"RAF activation";"Resolution of Sister Chromatid Cohesion";"Platelet sensitization by LDL";"S33 mutants of beta-catenin aren't phosphorylated";"PI5P, PP2A and IER3 Regulate PI3K/AKT Signaling";"Misspliced GSK3beta mutants stabilize beta-catenin";"EML4 and NUDC in mitotic spindle formation";"CTLA4 inhibitory signaling";"RHO GTPases Activate Formins";"Beta-catenin phosphorylation cascade";"S45 mutants of beta-catenin aren't phosphorylated" CFLO013535-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO007242-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO006115-PA 6 KEGG: 04070+2.7.1.107;MetaCyc: PWY-7039;Reactome: R-HSA-114508;MetaCyc: PWY-7817;KEGG: 00561+2.7.1.107;KEGG: 00564+2.7.1.107 "Phosphatidylinositol signaling system";"Phosphatidate metabolism, as a signaling molecule";"Effects of PIP2 hydrolysis";"Type I lipoteichoic acid biosynthesis (S. aureus)";"Glycerolipid metabolism";"Glycerophospholipid metabolism" CFLO009361-PA 2 Reactome: R-HSA-5173214;Reactome: R-HSA-5083635 "O-glycosylation of TSR domain-containing proteins";"Defective B3GALTL causes Peters-plus syndrome (PpS)" CFLO009092-PA 2 Reactome: R-HSA-611105;Reactome: R-HSA-6799198 "Respiratory electron transport";"Complex I biogenesis" CFLO006303-PA 4 Reactome: R-HSA-3359462;Reactome: R-HSA-3359463;Reactome: R-HSA-8964011;Reactome: R-HSA-196741 "Defective AMN causes hereditary megaloblastic anemia 1";"Defective CUBN causes hereditary megaloblastic anemia 1";"HDL clearance";"Cobalamin (Cbl, vitamin B12) transport and metabolism" CFLO000241-PA 2 Reactome: R-HSA-5628897;Reactome: R-HSA-611105 "TP53 Regulates Metabolic Genes";"Respiratory electron transport" CFLO018023-PA 2 Reactome: R-HSA-8853383;KEGG: 00511+3.2.1.24 "Lysosomal oligosaccharide catabolism";"Other glycan degradation" CFLO004850-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" CFLO015914-PA 2 Reactome: R-HSA-983168;MetaCyc: PWY-7511 "Antigen processing: Ubiquitination & Proteasome degradation";"Protein ubiquitination" CFLO000886-PA 4 KEGG: 00230+2.7.4.3;MetaCyc: PWY-7219;Reactome: R-HSA-499943;KEGG: 00730+2.7.4.3 "Purine metabolism";"Adenosine ribonucleotides de novo biosynthesis";"Interconversion of nucleotide di- and triphosphates";"Thiamine metabolism" CFLO002812-PA 5 MetaCyc: PWY-3821;KEGG: 00520+2.7.1.6;MetaCyc: PWY-6527;KEGG: 00052+2.7.1.6;MetaCyc: PWY-6317 "D-galactose detoxification";"Amino sugar and nucleotide sugar metabolism";"Stachyose degradation";"Galactose metabolism";"D-galactose degradation I (Leloir pathway)" CFLO009354-PA 1 Reactome: R-HSA-194840 "Rho GTPase cycle" CFLO001596-PA 1 Reactome: R-HSA-1483191 "Synthesis of PC" CFLO000216-PA 14 MetaCyc: PWY-7782;KEGG: 00564+3.1.3.4;Reactome: R-HSA-75109;Reactome: R-HSA-4419969;MetaCyc: PWY-6453;MetaCyc: PWY-8055;Reactome: R-HSA-1483213;MetaCyc: PWY-8053;KEGG: 00565+3.1.3.4;MetaCyc: PWY-8051;Reactome: R-HSA-1483191;KEGG: 00561+3.1.3.4;KEGG: 00600+3.1.3.4;MetaCyc: PWY-8052 "Plasmalogen biosynthesis";"Glycerophospholipid metabolism";"Triglyceride biosynthesis";"Depolymerisation of the Nuclear Lamina";"Stigma estolide biosynthesis";"Palmitoyl ethanolamide biosynthesis";"Synthesis of PE";"Anandamide biosynthesis II";"Ether lipid metabolism";"Anandamide biosynthesis I";"Synthesis of PC";"Glycerolipid metabolism";"Sphingolipid metabolism";"2-arachidonoylglycerol biosynthesis" CFLO016292-PA 1 Reactome: R-HSA-212436 "Generic Transcription Pathway" CFLO002134-PA 4 Reactome: R-HSA-674695;Reactome: R-HSA-8866654;Reactome: R-HSA-75955;Reactome: R-HSA-112382 "RNA Polymerase II Pre-transcription Events";"E3 ubiquitin ligases ubiquitinate target proteins";"RNA Polymerase II Transcription Elongation";"Formation of RNA Pol II elongation complex" CFLO000144-PA 3 KEGG: 05235+3.1.3.16;KEGG: 04660+3.1.3.16;KEGG: 04658+3.1.3.16 "PD-L1 expression and PD-1 checkpoint pathway in cancer";"T cell receptor signaling pathway";"Th1 and Th2 cell differentiation" CFLO010904-PA 6 Reactome: R-HSA-72695;Reactome: R-HSA-156827;Reactome: R-HSA-72649;Reactome: R-HSA-72689;Reactome: R-HSA-72702;Reactome: R-HSA-72706 "Formation of the ternary complex, and subsequently, the 43S complex";"L13a-mediated translational silencing of Ceruloplasmin expression";"Translation initiation complex formation";"Formation of a pool of free 40S subunits";"Ribosomal scanning and start codon recognition";"GTP hydrolysis and joining of the 60S ribosomal subunit" CFLO002700-PA 1 Reactome: R-HSA-156588 "Glucuronidation" CFLO012689-PA 2 Reactome: R-HSA-6791226;Reactome: R-HSA-390471 "Major pathway of rRNA processing in the nucleolus and cytosol";"Association of TriC/CCT with target proteins during biosynthesis" CFLO004197-PA 42 Reactome: R-HSA-5334118;Reactome: R-HSA-8936459;Reactome: R-HSA-69473;Reactome: R-HSA-427359;Reactome: R-HSA-5625886;Reactome: R-HSA-110328;Reactome: R-HSA-2559580;Reactome: R-HSA-110329;Reactome: R-HSA-1221632;Reactome: R-HSA-912446;Reactome: R-HSA-427389;Reactome: R-HSA-427413;Reactome: R-HSA-5693571;Reactome: R-HSA-73772;Reactome: R-HSA-9616222;Reactome: R-HSA-171306;Reactome: R-HSA-9609690;Reactome: R-HSA-9018519;Reactome: R-HSA-2559586;Reactome: R-HSA-977225;Reactome: R-HSA-110331;Reactome: R-HSA-3214847;Reactome: R-HSA-1912408;Reactome: R-HSA-3214858;Reactome: R-HSA-201722;Reactome: R-HSA-9610379;Reactome: R-HSA-5250924;Reactome: R-HSA-5617472;Reactome: R-HSA-5578749;Reactome: R-HSA-3214841;Reactome: R-HSA-5693565;Reactome: R-HSA-5693607;Reactome: R-HSA-3214815;Reactome: R-HSA-212300;Reactome: R-HSA-3214842;Reactome: R-HSA-110330;Reactome: R-HSA-2299718;Reactome: R-HSA-4551638;Reactome: R-HSA-73728;Reactome: R-HSA-606279;Reactome: R-HSA-2559582;Reactome: R-HSA-8939236 "DNA methylation";"RUNX1 regulates genes involved in megakaryocyte differentiation and platelet function";"G2/M DNA damage checkpoint";"SIRT1 negatively regulates rRNA expression";"Activated PKN1 stimulates transcription of AR (androgen receptor) regulated genes KLK2 and KLK3";"Recognition and association of DNA glycosylase with site containing an affected pyrimidine";"Oxidative Stress Induced Senescence";"Cleavage of the damaged pyrimidine";"Meiotic synapsis";"Meiotic recombination";"ERCC6 (CSB) and EHMT2 (G9a) positively regulate rRNA expression";"NoRC negatively regulates rRNA expression";"Nonhomologous End-Joining (NHEJ)";"RNA Polymerase I Promoter Escape";"Transcriptional regulation of granulopoiesis";"Packaging Of Telomere Ends";"HCMV Early Events";"Estrogen-dependent gene expression";"DNA Damage/Telomere Stress Induced Senescence";"Amyloid fiber formation";"Cleavage of the damaged purine";"HATs acetylate histones";"Pre-NOTCH Transcription and Translation";"RMTs methylate histone arginines";"Formation of the beta-catenin:TCF transactivating complex";"HCMV Late Events";"B-WICH complex positively regulates rRNA expression";"Activation of anterior HOX genes in hindbrain development during early embryogenesis";"Transcriptional regulation by small RNAs";"PKMTs methylate histone lysines";"Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks";"Processing of DNA double-strand break ends";"HDACs deacetylate histones";"PRC2 methylates histones and DNA";"HDMs demethylate histones";"Recognition and association of DNA glycosylase with site containing an affected purine";"Condensation of Prophase Chromosomes";"SUMOylation of chromatin organization proteins";"RNA Polymerase I Promoter Opening";"Deposition of new CENPA-containing nucleosomes at the centromere";"Senescence-Associated Secretory Phenotype (SASP)";"RUNX1 regulates transcription of genes involved in differentiation of HSCs" CFLO002710-PA 2 Reactome: R-HSA-8873719;Reactome: R-HSA-8876198 "RAB geranylgeranylation";"RAB GEFs exchange GTP for GDP on RABs" CFLO002373-PA 1 Reactome: R-HSA-83936 "Transport of nucleosides and free purine and pyrimidine bases across the plasma membrane" CFLO004234-PA 1 Reactome: R-HSA-193648 "NRAGE signals death through JNK" CFLO012561-PA 1 Reactome: R-HSA-189200 "Cellular hexose transport" CFLO017742-PA 1 Reactome: R-HSA-70221 "Glycogen breakdown (glycogenolysis)" CFLO008088-PA 27 Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-180746;Reactome: R-HSA-3108214;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-159236;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-5578749;Reactome: R-HSA-191859;Reactome: R-HSA-9610379;Reactome: R-HSA-168333;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-5619107;Reactome: R-HSA-9609690;Reactome: R-HSA-168276;Reactome: R-HSA-4551638;Reactome: R-HSA-168271;Reactome: R-HSA-159231;Reactome: R-HSA-159230;Reactome: R-HSA-4615885 "tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Nuclear import of Rev protein";"SUMOylation of DNA damage response and repair proteins";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"Transcriptional regulation by small RNAs";"snRNP Assembly";"HCMV Late Events";"NEP/NS2 Interacts with the Cellular Export Machinery";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"HCMV Early Events";"NS1 Mediated Effects on Host Pathways";"SUMOylation of chromatin organization proteins";"Transport of Ribonucleoproteins into the Host Nucleus";"Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of the SLBP Dependant Mature mRNA";"SUMOylation of DNA replication proteins" CFLO001312-PA 9 Reactome: R-HSA-73779;Reactome: R-HSA-674695;Reactome: R-HSA-73776;Reactome: R-HSA-76042;Reactome: R-HSA-167172;Reactome: R-HSA-167161;Reactome: R-HSA-6807505;Reactome: R-HSA-75953;Reactome: R-HSA-167162 "RNA Polymerase II Transcription Pre-Initiation And Promoter Opening";"RNA Polymerase II Pre-transcription Events";"RNA Polymerase II Promoter Escape";"RNA Polymerase II Transcription Initiation And Promoter Clearance";"Transcription of the HIV genome";"HIV Transcription Initiation";"RNA polymerase II transcribes snRNA genes";"RNA Polymerase II Transcription Initiation";"RNA Polymerase II HIV Promoter Escape" CFLO002184-PA 1 Reactome: R-HSA-191273 "Cholesterol biosynthesis" CFLO000120-PA 27 Reactome: R-HSA-159231;Reactome: R-HSA-168271;Reactome: R-HSA-4551638;Reactome: R-HSA-4615885;Reactome: R-HSA-159230;Reactome: R-HSA-5619107;Reactome: R-HSA-159227;Reactome: R-HSA-170822;Reactome: R-HSA-168276;Reactome: R-HSA-9609690;Reactome: R-HSA-180910;Reactome: R-HSA-3232142;Reactome: R-HSA-168333;Reactome: R-HSA-9610379;Reactome: R-HSA-191859;Reactome: R-HSA-5578749;Reactome: R-HSA-159236;Reactome: R-HSA-4570464;Reactome: R-HSA-4085377;Reactome: R-HSA-1169408;Reactome: R-HSA-3371453;Reactome: R-HSA-6784531;Reactome: R-HSA-168325;Reactome: R-HSA-165054;Reactome: R-HSA-3301854;Reactome: R-HSA-3108214;Reactome: R-HSA-180746 "Transport of Mature mRNA Derived from an Intronless Transcript";"Transport of Ribonucleoproteins into the Host Nucleus";"SUMOylation of chromatin organization proteins";"SUMOylation of DNA replication proteins";"Transport of the SLBP Dependant Mature mRNA";"Defective TPR may confer susceptibility towards thyroid papillary carcinoma (TPC)";"Transport of the SLBP independent Mature mRNA";"Regulation of Glucokinase by Glucokinase Regulatory Protein";"NS1 Mediated Effects on Host Pathways";"HCMV Early Events";"Vpr-mediated nuclear import of PICs";"SUMOylation of ubiquitinylation proteins";"NEP/NS2 Interacts with the Cellular Export Machinery";"HCMV Late Events";"snRNP Assembly";"Transcriptional regulation by small RNAs";"Transport of Mature mRNA derived from an Intron-Containing Transcript";"SUMOylation of RNA binding proteins";"SUMOylation of SUMOylation proteins";"ISG15 antiviral mechanism";"Regulation of HSF1-mediated heat shock response";"tRNA processing in the nucleus";"Viral Messenger RNA Synthesis";"Rev-mediated nuclear export of HIV RNA";"Nuclear Pore Complex (NPC) Disassembly";"SUMOylation of DNA damage response and repair proteins";"Nuclear import of Rev protein" CFLO014203-PA 1 Reactome: R-HSA-3371453 "Regulation of HSF1-mediated heat shock response" CFLO012552-PA 13 KEGG: 00240+1.17.4.1;KEGG: 00480+1.17.4.1;MetaCyc: PWY-7184;KEGG: 00230+1.17.4.1;MetaCyc: PWY-7210;Reactome: R-HSA-499943;MetaCyc: PWY-7220;MetaCyc: PWY-7226;MetaCyc: PWY-6545;MetaCyc: PWY-7198;MetaCyc: PWY-7227;MetaCyc: PWY-7222;KEGG: 00983+1.17.4.1 "Pyrimidine metabolism";"Glutathione metabolism";"Pyrimidine deoxyribonucleotides de novo biosynthesis I";"Purine metabolism";"Pyrimidine deoxyribonucleotides biosynthesis from CTP";"Interconversion of nucleotide di- and triphosphates";"Adenosine deoxyribonucleotides de novo biosynthesis II";"Guanosine deoxyribonucleotides de novo biosynthesis I";"Pyrimidine deoxyribonucleotides de novo biosynthesis III";"Pyrimidine deoxyribonucleotides de novo biosynthesis IV";"Adenosine deoxyribonucleotides de novo biosynthesis";"Guanosine deoxyribonucleotides de novo biosynthesis II";"Drug metabolism - other enzymes" CFLO011645-PA 1 Reactome: R-HSA-6783310 "Fanconi Anemia Pathway" CFLO000053-PA 2 Reactome: R-HSA-8951664;Reactome: R-HSA-983168 "Neddylation";"Antigen processing: Ubiquitination & Proteasome degradation" CFLO004155-PA 4 KEGG: 00750+1.4.3.5;Reactome: R-HSA-964975;MetaCyc: PWY-7282;MetaCyc: PWY-7204 "Vitamin B6 metabolism";"Vitamins B6 activation to pyridoxal phosphate";"4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis";"Pyridoxal 5'-phosphate salvage II (plants)" CFLO018555-PA 10 MetaCyc: PWY-5891;MetaCyc: PWY-5895;MetaCyc: PWY-5892;MetaCyc: PWY-5849;MetaCyc: PWY-5890;MetaCyc: PWY-5844;MetaCyc: PWY-7996;Reactome: R-HSA-2142789;MetaCyc: PWY-5839;KEGG: 00130+2.1.1.163 "Menaquinol-11 biosynthesis";"Menaquinol-13 biosynthesis";"Menaquinol-12 biosynthesis";"Menaquinol-6 biosynthesis";"Menaquinol-10 biosynthesis";"Menaquinol-9 biosynthesis";"Menaquinol-4 biosynthesis I";"Ubiquinol biosynthesis";"Menaquinol-7 biosynthesis";"Ubiquinone and other terpenoid-quinone biosynthesis" CFLO002276-PA 1 KEGG: 00531+3.2.1.35 "Glycosaminoglycan degradation" CFLO007376-PA 2 Reactome: R-HSA-983168;Reactome: R-HSA-8951664 "Antigen processing: Ubiquitination & Proteasome degradation";"Neddylation" CFLO000566-PA 57 Reactome: R-HSA-8939902;Reactome: R-HSA-350562;Reactome: R-HSA-8948751;Reactome: R-HSA-5678895;Reactome: R-HSA-180534;Reactome: R-HSA-174178;Reactome: R-HSA-450408;Reactome: R-HSA-2871837;Reactome: R-HSA-8852276;Reactome: R-HSA-349425;Reactome: R-HSA-9010553;Reactome: R-HSA-202424;Reactome: R-HSA-69481;Reactome: R-HSA-174154;Reactome: R-HSA-69601;Reactome: R-HSA-1234176;Reactome: R-HSA-174113;Reactome: R-HSA-5610785;Reactome: R-HSA-180585;Reactome: R-HSA-4641257;Reactome: R-HSA-6798695;Reactome: R-HSA-8939236;Reactome: R-HSA-5610780;Reactome: R-HSA-5689880;Reactome: R-HSA-174184;Reactome: R-HSA-382556;Reactome: R-HSA-1169091;Reactome: R-HSA-68827;Reactome: R-HSA-5358346;Reactome: R-HSA-1236978;Reactome: R-HSA-68949;Reactome: R-HSA-5607761;Reactome: R-HSA-2467813;Reactome: R-HSA-5362768;Reactome: R-HSA-5658442;Reactome: R-HSA-983168;Reactome: R-HSA-9020702;Reactome: R-HSA-5676590;Reactome: R-HSA-4608870;Reactome: R-HSA-8951664;Reactome: R-HSA-5610783;Reactome: R-HSA-5607764;Reactome: R-HSA-9604323;Reactome: R-HSA-5687128;Reactome: R-HSA-4641258;Reactome: R-HSA-8854050;Reactome: R-HSA-5632684;Reactome: R-HSA-174084;Reactome: R-HSA-69017;Reactome: R-HSA-211733;Reactome: R-HSA-187577;Reactome: R-HSA-5689603;Reactome: R-HSA-5668541;Reactome: R-HSA-75815;Reactome: R-HSA-1236974;Reactome: R-HSA-195253;Reactome: R-HSA-8941858 "Regulation of RUNX2 expression and activity";"Regulation of ornithine decarboxylase (ODC)";"Regulation of PTEN stability and activity";"Defective CFTR causes cystic fibrosis";"Vpu mediated degradation of CD4";"APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1";"AUF1 (hnRNP D0) binds and destabilizes mRNA";"FCERI mediated NF-kB activation";"The role of GTSE1 in G2/M progression after G2 checkpoint";"Autodegradation of the E3 ubiquitin ligase COP1";"Regulation of expression of SLITs and ROBOs";"Downstream TCR signaling";"G2/M Checkpoints";"APC/C:Cdc20 mediated degradation of Securin";"Ubiquitin Mediated Degradation of Phosphorylated Cdc25A";"Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha";"SCF-beta-TrCP mediated degradation of Emi1";"GLI3 is processed to GLI3R by the proteasome";"Vif-mediated degradation of APOBEC3G";"Degradation of AXIN";"Neutrophil degranulation";"RUNX1 regulates transcription of genes involved in differentiation of HSCs";"Degradation of GLI1 by the proteasome";"Ub-specific processing proteases";"Cdc20:Phospho-APC/C mediated degradation of Cyclin A";"ABC-family proteins mediated transport";"Activation of NF-kappaB in B cells";"CDT1 association with the CDC6:ORC:origin complex";"Hedgehog ligand biogenesis";"Cross-presentation of soluble exogenous antigens (endosomes)";"Orc1 removal from chromatin";"Dectin-1 mediated noncanonical NF-kB signaling";"Separation of Sister Chromatids";"Hh mutants that don't undergo autocatalytic processing are degraded by ERAD";"Regulation of RAS by GAPs";"Antigen processing: Ubiquitination & Proteasome degradation";"Interleukin-1 signaling";"NIK-->noncanonical NF-kB signaling";"Asymmetric localization of PCP proteins";"Neddylation";"Degradation of GLI2 by the proteasome";"CLEC7A (Dectin-1) signaling";"Negative regulation of NOTCH4 signaling";"MAPK6/MAPK4 signaling";"Degradation of DVL";"FBXL7 down-regulates AURKA during mitotic entry and in early mitosis";"Hedgehog 'on' state";"Autodegradation of Cdh1 by Cdh1:APC/C";"CDK-mediated phosphorylation and removal of Cdc6";"Regulation of activated PAK-2p34 by proteasome mediated degradation";"SCF(Skp2)-mediated degradation of p27/p21";"UCH proteinases";"TNFR2 non-canonical NF-kB pathway";"Ubiquitin-dependent degradation of Cyclin D";"ER-Phagosome pathway";"Degradation of beta-catenin by the destruction complex";"Regulation of RUNX3 expression and activity" CFLO013131-PA 3 MetaCyc: PWY-7999;Reactome: R-HSA-6806664;KEGG: 00130+1.17.4.4 "Vitamin K-epoxide cycle";"Metabolism of vitamin K";"Ubiquinone and other terpenoid-quinone biosynthesis" CFLO004651-PA 1 Reactome: R-HSA-446210 "Synthesis of UDP-N-acetyl-glucosamine" CFLO010944-PA 5 MetaCyc: PWY-7921;KEGG: 00515+2.4.1.109;MetaCyc: PWY-7922;MetaCyc: PWY-7979;KEGG: 00514+2.4.1.109 "Protein O-mannosylation I (yeast)";"Mannose type O-glycan biosynthesis";"Protein O-mannosylation II (mammals, core M1 and core M2)";"Protein O-mannosylation III (mammals, core M3)";"Other types of O-glycan biosynthesis" CFLO010851-PA 1 Reactome: R-HSA-983168 "Antigen processing: Ubiquitination & Proteasome degradation" CFLO018277-PA 1 Reactome: R-HSA-3214858 "RMTs methylate histone arginines" CFLO002440-PA 1 Reactome: R-HSA-8951664 "Neddylation" CFLO005709-PA 17 Reactome: R-HSA-6790901;Reactome: R-HSA-156902;Reactome: R-HSA-72649;Reactome: R-HSA-72695;Reactome: R-HSA-72764;Reactome: R-HSA-9010553;Reactome: R-HSA-975956;Reactome: R-HSA-2408557;Reactome: R-HSA-975957;Reactome: R-HSA-9633012;Reactome: R-HSA-72702;Reactome: R-HSA-1799339;Reactome: R-HSA-72689;Reactome: R-HSA-156827;Reactome: R-HSA-6791226;Reactome: R-HSA-72706;Reactome: R-HSA-192823 "rRNA modification in the nucleus and cytosol";"Peptide chain elongation";"Translation initiation complex formation";"Formation of the ternary complex, and subsequently, the 43S complex";"Eukaryotic Translation Termination";"Regulation of expression of SLITs and ROBOs";"Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)";"Selenocysteine synthesis";"Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)";"Response of EIF2AK4 (GCN2) to amino acid deficiency";"Ribosomal scanning and start codon recognition";"SRP-dependent cotranslational protein targeting to membrane";"Formation of a pool of free 40S subunits";"L13a-mediated translational silencing of Ceruloplasmin expression";"Major pathway of rRNA processing in the nucleolus and cytosol";"GTP hydrolysis and joining of the 60S ribosomal subunit";"Viral mRNA Translation" CFLO011829-PA 1 Reactome: R-HSA-983231 "Factors involved in megakaryocyte development and platelet production"