The following files were retrieved from NCBI
helvir_OGSv1.1_pep.fa

Information about this dataset can be found here: https://i5k.nal.usda.gov/bio_data/836519

Information about the functional annotation pipeline can be found here: https://www.mdpi.com/2075-4450/12/8/748
Instruction for running the functional annotation pipeline can be found here: https://agbase-docs.readthedocs.io/en/latest/agbase/workflow.html

The file helvir_OGSv1.1_pep.fa was post-processed with agbase/goanna:2.3 (https://hub.docker.com/repository/docker/agbase/goanna) docker container to generate GO functional annotation.
GOanna was run with these options: -a,invertebrates; -f,3; -g,70; -k,9; -q,70; -r,1.2.
The resulting files are:

GCA_002382865.2.asn
GCA_002382865.2.gaf.tsv
GCA_002382865.2.html
GCA_002382865.2.tsv

The file helvir_OGSv1.1_pep.fa was post-processed with agbase/interproscan:5.63-95_1 (https://hub.docker.com/repository/docker/agbase/interproscan) docker container to generate GO and pathway functional annotation. The resulting files are:

GCA_002382865_acc_go_counts.txt
GCA_002382865_acc_interpro_counts.txt
GCA_002382865.err
GCA_002382865_gaf.txt
GCA_002382865.gff3
GCA_002382865_go_counts.txt
GCA_002382865_interpro_counts.txt
GCA_002382865.tsv


The file helvir_OGSv1.1_pep.fa was post-processed with agbase/kobas:3.0.3_3 (https://hub.docker.com/repository/docker/agbase/kobas) docker container to generate pathway functional annotation. The resulting files are:

GCA_002382865.2_KOBAS_acc_pathways.tsv
GCA_002382865.2_KOBAS_pathways_acc.tsv
GCA_002382865.2_KOBAS.txt


The GAF output files from InterProScan and GOanna were combined into a single GAF file using agbase/combine_gafs:1.1 (https://hub.docker.com/repository/docker/agbase/combine_gafs)

GCA_002382865.2_complete.gaf.tsv