Protein

augustus-scaffold1085size29322-processed-gene-0.1-mRNA-1

Length
3,489 amino acids


Protein family membership

Homologous superfamilies

  1. Homologous superfamily
  2. Homologous superfamily
1 500 1000 1500 2000 2500 3000 3489

Domains and repeats

1 500 1000 1500 2000 2500 3000 3489

Detailed signature matches

    1. SSF47413 (lambda re...)
    1. SSF53901 (Thiolase-...)
    1. SSF51230 (Single hy...)
    1. SSF52440 (PreATP-gr...)
    1. SSF51246 (Rudiment ...)
    1. SSF50249 (Nucleic a...)
    1. SSF52518 (Thiamin d...)
    1. SSF52922 (TK C-term...)
    1. SSF48150 (DNA-glyco...)
    1. PF04166 (PdxA)
    1. PF02620 (YceD)
    1. PS00718 (SIGMA54_2)
    2. PR00045 (SIGMA54FCT)
    3. PF00309 (Sigma54_AID)
    1. PF13292 (DXP_syntha...)
    2. MF_00315 (DXP_synth)
    3. PTHR43322 (FAMILY N...)
    4. cd02007 (TPP_DXS)
    1. PF11276 (DUF3078)
    1. PS50943 (HTH_CROC1)
    2. SM00530 (mbf_short4)
    3. cd00093 (HTH_XRE)
    1. PF08545 (ACP_syn_III)
    1. PF08541 (ACP_syn_III_C)
    1. PF00364 (Biotin_lipoyl)
    1. PF00289 (Biotin_carb_N)
    1. PS50975 (ATP_GRASP)
    1. PF02786 (CPSase_L_D2)
    2. PS00867 (CPSASE_2)
    3. PS00866 (CPSASE_1)
    1. SM00878 (Biotin_car...)
    2. PF02785 (Biotin_carb_C)
    1. PS50862 (AA_TRNA_LI...)
    1. PF00152 (tRNA-synt_2)
    1. PF04963 (Sigma54_CBD)
    1. PF04552 (Sigma54_DBD)
    1. PF02779 (Transket_pyr)
    2. SM00861 (Transket_p...)
    1. PF02780 (Transketol...)
    1. SM00478 (endo3end)
    2. PF00730 (HhH-GPD)
    3. cd00056 (ENDO3c)
    1. PS00188 (BIOTIN)
    1. PS00802 (TRANSKETOL...)
    1. PF00633 (HHH)
Unintegrated signatures no IPR
Unintegrated signatures
  1. PS50044 (SIGMA54_3)
  2. PTHR43322:SF5 (1-DE...)
  3. SSF53659 (Isocitrat...)
  4. SSF55681 (Class II ...)
  5. SSF56059 (Glutathio...)
  6. cd00830 (KAS_III)
  7. cd04318 (EcAsnRS_li...)
  8. cd06850 (biotinyl_d...)
  9. cd07033 (TPP_PYR_DX...)

Other features

Residue annotation

  1. non-specific DNA b...
  2. salt bridge cd00093
  3. sequence-specific ...
  4. dimer interface cd...
  5. active site cd00830
  6. CoA binding pocket...
  7. carboxyltransferas...
  8. biotinylation site...
  9. putative anticodon...
  10. TPP-binding site c...
  11. PYR/PP interface c...
  12. dimer interface cd...
  13. TPP binding site c...
  14. helix-hairpin-heli...
  15. substrate binding ...
  16. active site cd00056

GO term prediction

Biological Process

GO:0006281 DNA repair
GO:0006284 base-excision repair
GO:0006352 DNA-templated transcription, initiation
GO:0006418 tRNA aminoacylation for protein translation
GO:0006421 asparaginyl-tRNA aminoacylation
GO:0006633 fatty acid biosynthetic process
GO:0016114 terpenoid biosynthetic process
GO:0055114 oxidation-reduction process

Molecular Function

GO:0000166 nucleotide binding
GO:0001216 DNA-binding transcription activator activity
GO:0003677 DNA binding
GO:0003824 catalytic activity
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004816 asparagine-tRNA ligase activity
GO:0005524 ATP binding
GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity
GO:0016874 ligase activity
GO:0016987 sigma factor activity
GO:0046872 metal ion binding
GO:0051287 NAD binding

Cellular Component

None predicted.

Generated with InterProScan 5.45-80.0