Protein

augustus-scaffold633size67688-processed-gene-0.0-mRNA-1

Length
7,652 amino acids


Protein family membership

Homologous superfamilies

  1. Homologous superfamily
  2. Homologous superfamily
  3. Homologous superfamily
1 1000 2000 3000 4000 5000 6000 7000 7652

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
1 1000 2000 3000 4000 5000 6000 7000 7652

Detailed signature matches

    1. SSF56925 (OMPA-like)
    1. SSF52467 (DHS-like ...)
    1. SSF55190 (Arginyl-t...)
    1. SSF47323 (Anticodon...)
    1. SSF56719 (Type II D...)
    1. SSF101904 (GyrA/Par...)
    1. SSF51735 (NAD(P)-bi...)
    1. SSF103473 (MFS gene...)
    1. SSF53383 (PLP-depen...)
    1. SSF56176 (FAD-bindi...)
    1. SSF53901 (Thiolase-...)
    1. SSF52540 (P-loop co...)
    1. SSF51713 (tRNA-guan...)
    1. SSF50249 (Nucleic a...)
    1. SSF47781 (RuvA doma...)
    1. SSF52113 (BRCT domain)
    1. PF03922 (OmpW)
    1. PF06242 (DUF1013)
    1. MF_01212 (dGTPase_t...)
    1. PR01038 (TRNASYNTHARG)
    2. MF_00123 (Arg_tRNA_...)
    1. MF_00936 (ParC_type1)
    1. PF05088 (Bac_GDH)
    1. PTHR43403 (FAMILY N...)
    1. PF07690 (MFS_1)
    1. MF_00051 (SHMT)
    2. cd00378 (SHMT)
    1. MF_00206 (Lipoyl_synth)
    1. cd00751 (thiolase)
    1. MF_00168 (Q_tRNA_Tgt)
    1. MF_01588 (DNA_ligase_A)
    1. cd07984 (LPLAT_LABL...)
    2. PF03279 (Lip_A_acyl...)
    1. PF02233 (PNTB)
    1. PF13609 (Porin_4)
    1. cd00077 (HDc)
    2. SM00471 (hd_13)
    1. PF03485 (Arg_tRNA_s...)
    2. SM01016 (Arg_tRNA_s...)
    1. cd00671 (ArgRS_core)
    2. PF00750 (tRNA-synt_1d)
    1. PF05746 (DALR_1)
    2. SM00836 (dalr_1_4)
    1. SM00434 (topIV4)
    2. PF00521 (DNA_topoisoIV)
    3. cd00187 (TOP4c)
    1. PS50850 (MFS)
    1. PF02230 (Abhydrolase_2)
    1. PF00464 (SHMT)
    1. PF04055 (Radical_SAM)
    2. SFLDS00029 (Radical...)
    1. SM00729 (MiaB)
    1. PS51371 (CBS)
    2. PF00571 (CBS)
    1. SM01091 (CorC_HlyC_2)
    2. PF03471 (CorC_HlyC)
    1. PF00108 (Thiolase_N)
    1. PF02803 (Thiolase_C)
    1. PF01702 (TGT)
    1. cd00114 (LIGANc)
    2. PF01653 (DNA_ligase...)
    1. SM00532 (ligaN3)
    1. PF03120 (DNA_ligase_OB)
    1. PF12826 (HHH_2)
    1. SM00292 (BRCT_7)
    2. PS50172 (BRCT)
    1. PF03989 (DNA_gyraseA_C)
    1. PS00178 (AA_TRNA_LI...)
    1. PS00096 (SHMT)
    1. PS00098 (THIOLASE_1)
    1. PS00737 (THIOLASE_2)
    1. PS01055 (DNA_LIGASE_N1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. SSF102114 (Radical ...)
  2. SSF109604 (HD-domai...)
  3. SSF52374 (Nucleotid...)
  4. SSF53223 (Aminoacid...)
  5. SSF54631 (CBS-domai...)
  6. SSF56091 (DNA ligas...)
  7. SSF56935 (Porins)
  8. cd01335 (Radical_SAM)
  9. cd04590 (CBS_pair_C...)
  10. cd17316 (MFS_SV2_like)
  11. cd17748 (BRCT_DNA_l...)
  12. cd17777 (CBS_arch_r...)
  13. cd17934 (DEXXQc_Upf...)

Other features

  1. mobidb-lite (disord...)
  2. mobidb-lite (Polyam...)

Residue annotation

  1. Zn2+ binding site ...
  2. Mg2+ binding site ...
  3. active site cd00671
  4. HIGH motif cd00671
  5. KMSK motif region ...
  6. CAP-like domain cd...
  7. Active site cd00187
  8. primary dimer inte...
  9. putative chemical ...
  10. dimer interface cd...
  11. glycine-pyridoxal ...
  12. active site cd00378
  13. folate binding sit...
  14. SFLDS00029
  15. FeS/SAM binding si...
  16. ligand binding sit...
  17. putative ligand bi...
  18. dimer interface cd...
  19. active site cd00751
  20. nucleotide binding...
  21. catalytic site cd0...
  22. K-X-D-G motif cd00...
  23. DNA binding site c...
  24. putative acyl-acce...

GO term prediction

Biological Process

GO:0006259 DNA metabolic process
GO:0006260 DNA replication
GO:0006265 DNA topological change
GO:0006281 DNA repair
GO:0006400 tRNA modification
GO:0006418 tRNA aminoacylation for protein translation
GO:0006420 arginyl-tRNA aminoacylation
GO:0009107 lipoate biosynthetic process
GO:0019264 glycine biosynthetic process from serine
GO:0019551 glutamate catabolic process to 2-oxoglutarate
GO:0035999 tetrahydrofolate interconversion
GO:0055085 transmembrane transport
GO:0101030 tRNA-guanine transglycosylation

Molecular Function

GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003824 catalytic activity
GO:0003911 DNA ligase (NAD+) activity
GO:0003916 DNA topoisomerase activity
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0004352 glutamate dehydrogenase (NAD+) activity
GO:0004372 glycine hydroxymethyltransferase activity
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004814 arginine-tRNA ligase activity
GO:0005524 ATP binding
GO:0008479 queuine tRNA-ribosyltransferase activity
GO:0015288 porin activity
GO:0016740 transferase activity
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016763 transferase activity, transferring pentosyl groups
GO:0016787 hydrolase activity
GO:0016793 triphosphoric monoester hydrolase activity
GO:0016992 lipoate synthase activity
GO:0022857 transmembrane transporter activity
GO:0030170 pyridoxal phosphate binding
GO:0050660 flavin adenine dinucleotide binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding

Cellular Component

GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0019867 outer membrane

Generated with InterProScan 5.45-80.0