augustus-scaffold633size67688-processed-gene-0.0-mRNA-1
Protein family membership
- Outer membrane protein, OmpW (IPR005618)
- Protein of unknown function DUF1013 (IPR010421)
- dNTP triphosphohydrolase (IPR006261)
- dNTP triphosphohydrolase, type 2 (IPR023023)
- Arginine-tRNA ligase (IPR001278)
- DNA topoisomerase IV, subunit A, Gram-negative (IPR005742)
- NAD-glutamate dehydrogenase (IPR028971)
- NAD-glutamate dehydrogenase, bacteria (IPR007780)
- Major facilitator superfamily (IPR011701)
- Serine hydroxymethyltransferase (IPR001085)
- Lipoyl synthase (IPR003698)
- Thiolase (IPR002155)
- tRNA-guanine transglycosylase (IPR004803)
- NAD-dependent DNA ligase (IPR001679)
- Bacterial lipid A biosynthesis acyltransferase (IPR004960)
Homologous superfamilies
-
Homologous superfamily
-
Homologous superfamily
-
Homologous superfamily
Domains and repeats
-
Domain
-
Domain
-
Repeat
Detailed signature matches
-
-
SSF56925 (OMPA-like)
-
-
-
SSF52467 (DHS-like ...)
-
-
-
SSF55190 (Arginyl-t...)
-
-
-
G3DSA:3.40.50... (HUPs)
-
-
-
SSF47323 (Anticodon...)
-
-
-
SSF56719 (Type II D...)
-
-
-
G3DSA:3.90.19... (T...)
-
-
-
G3DSA:1.10.26... (T...)
-
-
-
SSF101904 (GyrA/Par...)
-
-
-
-
SSF51735 (NAD(P)-bi...)
-
-
-
SSF103473 (MFS gene...)
-
-
-
SSF53383 (PLP-depen...)
-
-
-
G3DSA:3.90.11... (A...)
-
-
-
G3DSA:3.20.20.70 (A...)
-
-
-
SSF56176 (FAD-bindi...)
-
-
-
SSF53901 (Thiolase-...)
-
-
-
-
SSF52540 (P-loop co...)
-
-
-
SSF51713 (tRNA-guan...)
-
-
-
-
SSF50249 (Nucleic a...)
-
-
-
SSF47781 (RuvA doma...)
-
-
-
SSF52113 (BRCT domain)
-
-
-
-
PF03922 (OmpW)
-
-
-
PF06242 (DUF1013)
-
-
-
MF_01212 (dGTPase_t...)
-
-
-
MF_00936 (ParC_type1)
-
-
-
PF05088 (Bac_GDH)
-
-
-
PTHR43403 (FAMILY N...)
-
-
-
PF07690 (MFS_1)
-
-
-
MF_00206 (Lipoyl_synth)
-
-
-
PF02233 (PNTB)
-
-
-
PF13609 (Porin_4)
-
-
-
PF01966 (HD)
-
-
-
PS50850 (MFS)
-
-
-
PF02230 (Abhydrolase_2)
-
-
-
PF00464 (SHMT)
-
-
-
PF04055 (Radical_SAM)
-
SFLDS00029 (Radical...)
-
-
-
SM00729 (MiaB)
-
-
-
PF00108 (Thiolase_N)
-
-
-
PF02803 (Thiolase_C)
-
-
-
SM00532 (ligaN3)
-
-
-
PF03120 (DNA_ligase_OB)
-
-
-
PF12826 (HHH_2)
-
-
-
PF03989 (DNA_gyraseA_C)
-
-
-
PS00178 (AA_TRNA_LI...)
-
-
-
PS00096 (SHMT)
-
-
-
PS00098 (THIOLASE_1)
-
-
-
PS00737 (THIOLASE_2)
-
-
-
PS01055 (DNA_LIGASE_N1)
-

-
G3DSA:1.10.15... (5...)
-
G3DSA:1.10.28... (H...)
-
G3DSA:1.10.32... (H...)
-
-
G3DSA:1.20.12... (M...)
-
-
-
-
-
-
-
-
-
SSF102114 (Radical ...)
-
SSF109604 (HD-domai...)
-
SSF52374 (Nucleotid...)
-
SSF53223 (Aminoacid...)
-
SSF54631 (CBS-domai...)
-
SSF56091 (DNA ligas...)
-
SSF56935 (Porins)
-
-
cd01335 (Radical_SAM)
-
cd04590 (CBS_pair_C...)
-
cd17316 (MFS_SV2_like)
-
cd17748 (BRCT_DNA_l...)
-
cd17777 (CBS_arch_r...)
-
cd17934 (DEXXQc_Upf...)
Other features
-
-
mobidb-lite (disord...)
-
mobidb-lite (Polyam...)
-
mobidb-lite (Polar)
Residue annotation
-
Zn2+ binding site ...
-
Mg2+ binding site ...
-
active site cd00671
-
HIGH motif cd00671
-
KMSK motif region ...
-
CAP-like domain cd...
-
Active site cd00187
-
primary dimer inte...
-
putative chemical ...
-
dimer interface cd...
-
glycine-pyridoxal ...
-
active site cd00378
-
folate binding sit...
-
SFLDS00029
-
FeS/SAM binding si...
-
ligand binding sit...
-
putative ligand bi...
-
dimer interface cd...
-
active site cd00751
-
nucleotide binding...
-
catalytic site cd0...
-
K-X-D-G motif cd00...
-
DNA binding site c...
-
putative acyl-acce...
GO term prediction
Biological Process
GO:0006259 DNA metabolic process
GO:0006260 DNA replication
GO:0006265 DNA topological change
GO:0006281 DNA repair
GO:0006400 tRNA modification
GO:0006418 tRNA aminoacylation for protein translation
GO:0006420 arginyl-tRNA aminoacylation
GO:0009107 lipoate biosynthetic process
GO:0019264 glycine biosynthetic process from serine
GO:0019551 glutamate catabolic process to 2-oxoglutarate
GO:0035999 tetrahydrofolate interconversion
GO:0055085 transmembrane transport
GO:0101030 tRNA-guanine transglycosylation
Molecular Function
GO:0000166 nucleotide binding
GO:0003677 DNA binding
GO:0003824 catalytic activity
GO:0003911 DNA ligase (NAD+) activity
GO:0003916 DNA topoisomerase activity
GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
GO:0004352 glutamate dehydrogenase (NAD+) activity
GO:0004372 glycine hydroxymethyltransferase activity
GO:0004812 aminoacyl-tRNA ligase activity
GO:0004814 arginine-tRNA ligase activity
GO:0005524 ATP binding
GO:0008479 queuine tRNA-ribosyltransferase activity
GO:0015288 porin activity
GO:0016740 transferase activity
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
GO:0016763 transferase activity, transferring pentosyl groups
GO:0016787 hydrolase activity
GO:0016793 triphosphoric monoester hydrolase activity
GO:0016992 lipoate synthase activity
GO:0022857 transmembrane transporter activity
GO:0030170 pyridoxal phosphate binding
GO:0050660 flavin adenine dinucleotide binding
GO:0051536 iron-sulfur cluster binding
GO:0051539 4 iron, 4 sulfur cluster binding
Cellular Component
GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0019867 outer membrane