The files in this directory represent functional annotations of the following dataset: https://i5k.nal.usda.gov/data/Arthropoda/tricas-%28Tribolium_castaneum%29/GCF_000002335.3/2.Official%20or%20Primary%20Gene%20Set/TCAS_OGS_v3/GCA_000002335.3_Tcas5.2_protein.faa

More information about this dataset can be found here: https://i5k.nal.usda.gov/bio_data/1193334

Information about the functional annotation process can be found here: https://agbase-docs.readthedocs.io/en/latest/

The file GCA_000002335.3_Tcas5.2_protein.faa was post-processed with agbase/goanna:2.1 (https://hub.docker.com/repository/docker/agbase/goanna/tags?page=1) docker container to generate GO functional annotation. The resulting files are:
GOanna.goanna.exponly.invertb.percentident70_qcov70.ratioqrysublen1.2.out.asn
GOanna.goanna.exponly.invertb.percentident70_qcov70.ratioqrysublen1.2.out.html
GOanna.goanna.exponly.invertb.percentident70_qcov70.ratioqrysublen1.2.out.tsv
GOanna.goanna.exponly.invertb.percentident70_qcov70.ratioqrysublen1.2.out_goanna_gaf.tsv

The file GCA_000002335.3_Tcas5.2_protein.faa was post-processed with agbase/interproscan:5.45-80.0_0 (https://hub.docker.com/repository/docker/agbase/interproscan/tags?page=1) docker container to generate GO and pathway functional annotation. The resulting files are:
def-TCAS_full/GCA_000002335.err          def-TCAS_full/GCA_000002335_acc_go_counts.txt
def-TCAS_full/GCA_000002335.gff3         def-TCAS_full/GCA_000002335_acc_interpro_counts.txt
def-TCAS_full/GCA_000002335.html.tar.gz  def-TCAS_full/GCA_000002335_acc_pathway_counts.txt
def-TCAS_full/GCA_000002335.json         def-TCAS_full/GCA_000002335_gaf.txt
def-TCAS_full/GCA_000002335.svg.tar.gz   def-TCAS_full/GCA_000002335_go_counts.txt
def-TCAS_full/GCA_000002335.tsv          def-TCAS_full/GCA_000002335_interpro_counts.txt
def-TCAS_full/GCA_000002335.xml          def-TCAS_full/GCA_000002335_pathway_counts.txt

The file GCA_000002335.3_Tcas5.2_protein.faa was post-processed with agbase/kobas:3.0.3_0 (https://hub.docker.com/repository/docker/agbase/kobas/tags?page=1) docker container to generate pathway functional annotation. The resulting files are:
def-annotate_KOBAS_pathways_acc.tsv
def-annotate_acc_KOBAS_pathways.tsv