Anoplophora glabripennis

Overview

The Asian long-horned beetle (Anoplophora glabripennis) (ALB) is an invasive pest from Asia that came to Canada, the United States and Europe concealed in solid wood packing material.

It is a serious threat to deciduous hardwood trees in urban, suburban, and forested parts of the country. Larvae bore into a tree's heartwood, damaging and eventually killing the tree. If it became widely established in North America (it is already established locally), it could be one of the most destructive and costly invasive species ever (USDA Program Aid No.1655). This is target of current USDA eradication efforts.

These beetles are large (1-1.5 inches), and one beetle can provide more than 10 micrograms of DNA. Specimens in North America are all relatively closely related. Suitable specimens are available for sequencing.

All files were generated by the Baylor College of Medicine's i5k pilot project. The original source for these files is here. Please cite the following publication when using the A. glabripennis genome and annotations:
McKenna, D. D., Scully, E. D., Pauchet, Y., et al. Genome of the Asian longhorned beetle (Anoplophora glabripennis), a globally significant invasive species, reveals key functional and evolutionary innovations at the beetle–plant interface. Genome Biology 2017 17(1), 227. DOI: 10.1186/s13059-016-1088-8

Community contact:

Image Credit: Appleby James, U.S. Fish and Wildlife Service. View Source.
Feature Summary
The following features are currently present for this organism
Feature TypeCount
CDS99,911
mRNA22,037
Gene22,035
Organism Image
Contig N50
NA
Scaffold N50
678234
Number Of Genes
21776
Community Contact
Community Contact: 
Duane McKenna|dmckenna@memphis.edu
Image Credit
Appleby James, U.S. Fish and Wildlife Service. <a href="http://www.public-domain-image.com/free-images/fauna-animals/insects-and-bugs/beetle-insects-pictures/asian-longhorn-beetle-anoplophora-glabripennis-invasive-species">View Source.</a>

Assembly Information

Analysis Name Anoplophora glabripennis genome assembly Agla_2.0 (GCF_000390285.2)
Software AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2; redundans v. 0.12c (NA)
Source SAMN02222868
Date performed 2018-09-18
Materials & Methods

See https://www.ncbi.nlm.nih.gov/assembly/GCF_000390285.2 for more information. 

Statistics

Assembly Metrics
Contig N50 NA
Scaffold N50 678234
GC Content 32.72