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i5k Workspace@NAL
U.S. Department of Agriculture
  1. Genomeannotation
  2. Heliothis Virescens Annotations GCA_002382865.1_K63_refined_pacbio_genomic 1

Heliothis virescens annotations GCA_002382865.1_K63_refined_pacbio_genomic 1

Summary
Type
Genome annotation
Name
Heliothis virescens annotations GCA_002382865.1_K63_refined_pacbio_genomic 1
Description
Annotations on genome assembly GCA_002382865.1 were created using the Just Annotate My Genome pipeline (JAMg, https://github.com/genomecuration/JAMg). De novo gene predictors GeneMark.HMM-ET and Augustus were chosen as part of the JAMg pipeline. For a complete description of the methods, see https://doi.org/10.1111/mec.14430. These annotations are also available at NCBI: https://www.ncbi.nlm.nih.gov/datasets/gene/GCA_002382865.1/
Program, Pipeline, Workflow or Method Name
JAMg
Program Version
RC1
Source Name
Heliothis virescens genome assembly K63_refined_pacbio 1 GCA_002382865.1
Data Source URI

https://i5k.nal.usda.gov/data/Arthropoda/helvir-%28Heliothis_virescens%…
Organism
Heliothis virescens
Publication
Fritz ML, DeYonke AM, Papanicolaou A, Micinski S, Westbrook J, Gould F. Contemporary evolution of a Lepidopteran species, Heliothis virescens, in response to modern agricultural practices.. Molecular ecology. 2018 01; 27(1):167-181.