An official website of the United States government.

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

i5k Workspace@NAL
U.S. Department of Agriculture
  1. Genomeannotation
  2. Cephus Cinctus Annotations Cepcin_OGSv1.1

Cephus cinctus annotations cepcin_OGSv1.1

Summary
Type
Genome annotation
Name
Cephus cinctus annotations cepcin_OGSv1.1
Description
The Official Gene Set cepcin_OGSv1.1 is an update from Cephus cinctus Official Gene Set 1.0 (cepcin_OGSv1.0). Updates were performed to the feature metadata, including cross-references and identifiers from NCBI-derived models. Protein-coding genes predicted by NCBI on mitochondrial DNA were added, and all tRNAs and rRNAs removed (these are still available from NCBI and at the i5k Workspace).

The full dataset is accessible at the Ag Data Commons: https://doi.org/10.15482/USDA.ADC/1484022

Protein pages for the manual annotations can be accessed at NCBI: https://www.ncbi.nlm.nih.gov/protein?LinkName=nuccore_protein_wgs&from_uid=662999107
Program, Pipeline, Workflow or Method Name
GFF3toolkit
Program Version
2.0.1
Source Name
Cephus cinctus genome assembly Ccin1 (GCF_000341935.1)
Data Source URI

https://i5k.nal.usda.gov/data/Arthropoda/cepcin-%28Cephus_cinctus%29/Cc…
Organism
Cephus cinctus
Publication
Robertson HM, Waterhouse RM, Walden KKO, Ruzzante L, Reijnders MJMF, Coates BS, Legeai F, Gress JC, Biyiklioglu S, Weaver DK, Wanner KW, Budak H. Genome Sequence of the Wheat Stem Sawfly, Cephus cinctus, Representing an Early-Branching Lineage of the Hymenoptera, Illuminates Evolution of Hymenopteran Chemoreceptors.. Genome biology and evolution. 2018 11 01; 10(11):2997-3011.