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i5k Workspace@NAL
U.S. Department of Agriculture
  1. Genomeassembly
  2. Tribolium Castaneum Genome Assembly Tcas5.2 (GCF_000002335.3)

Tribolium castaneum genome assembly Tcas5.2 (GCF_000002335.3)

Summary
Type
genome assembly
Name
Tribolium castaneum genome assembly Tcas5.2 (GCF_000002335.3)
Description

Geographical location of specimen collection:Georgia, USA
Tissues included: whole insect
Sex: mixed eggs
Strain: GA-2
Other notes: GA strain was brother sister inbred for 20 generations
Program, Pipeline, Workflow or Method Name
AllPaths v. 2008; ATLAS-LINK v. 2014; GapFiller v. 2014; stitch v. 2014
Program Version
NA
Data Source Name
SAMN02953634
Organism
Tribolium castaneum
Publication
Shelton JM, Coleman MC, Herndon N, Lu N, Lam ET, Anantharaman T, Sheth P, Brown SJ. Tools and pipelines for BioNano data: molecule assembly pipeline and FASTA super scaffolding tool.. BMC genomics. 2015 Sep 29; 16:734.