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U.S. Department of Agriculture

Pectinophora gossypiella genome assembly ilPecGoss1.1 (GCF_024362695.1)

Summary
Summary
Resource Type
Genome Assembly
Name
Pectinophora gossypiella genome assembly ilPecGoss1.1 (GCF_024362695.1)
Program, Pipeline, Workflow or Method Name
FALCON v. 1.8.1; FALCON-Unzip v. 1.3.7; purge_dups v. 1.2.5; bwa-mem v. 2.2.1; YaHS v. 1.0; Juicebox v. 1.11.08; Arrow gcpp v. 2.0.2; FreeBayes v. 1.0.2; Merqury v. 1.1
Program Version
NA
Data Source
Source Name
: SAMN25818887
Source URI
: https://www.ncbi.nlm.nih.gov/biosample/SAMN25818887/
Organism
P. gossypiella (pink bollworm)
Publication
  1. Stahlke AR, Chang J, Chudalayandi S, Heu CC, Geib SM, Scheffler BE, Childers AK, Fabrick JA. Chromosome-scale genome assembly of the pink bollworm, Pectinophora gossypiella, a global pest of cotton.. G3 (Bethesda, Md.). 2023 Feb 15.
  2. Childers AK, Geib SM, Sim SB, Poelchau MF, Coates BS, Simmonds TJ, Scully ED, Smith TPL, Childers CP, Corpuz RL, Hackett K, Scheffler B. The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research.. Insects. 2021 Jul 09; 12(7).
Cross Reference
NCBI Assembly