Varroa destructor
Summary
Type |
organism
|
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Genus |
Varroa
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Species |
destructor
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Common Name |
Honeybee mite
|
Description | |
Publication |
Techer MA, Rane RV, Grau ML, Roberts JMK, Sullivan ST, Liachko I, Childers AK, Evans JD, Mikheyev AS. Divergent evolutionary trajectories following speciation in two ectoparasitic honey bee mites. . Communications biology. 2019; 2:357.
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Organism Image | |
Image Credit |
Maeva Techer, CC BY-NC-SA 4.0
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Assembly Stats
Contig N50 |
NA
|
---|---|
GC Content |
35.82
|
Scaffold N50 |
58,536,683
|
Other Information
Community Contact |
Maeva Techer, Texas A&M University; Jay Evans, USDA-ARS
|
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Links |
Analyses
Name | Program |
---|---|
NCBI Varroa destructor Annotation Release 100 | NCBI Eukaryotic annotation pipeline |
Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.1) | Newbler v. 2.6; pbjelly v. 15.8.24 |
Functional annotation of NCBI Varroa destructor Annotation Release 100 | AgBase functional annotation pipeline |
Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2) | Newbler v. 2.6; pbjelly v. 15.8.24 |
The ectoparasitic mite Varroa destructor, of the mite order Mesostigmata, originated in Asia as a pest of the Asian honey bee (Apis cerana). However, subsequent to making a host switch and becoming a primary parasite of the domesticated Western honey bee (Apis mellifera), it has successfully spread almost worldwide and is considered the most damaging pest to beekeeping. V. destructor is an obligate parasite of immature and adult bees, and is a confirmed vector of viral pathogens important for bee health.
Genome update. Previously, the i5k Workspace@NAL hosted Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2), NCBI Varroa destructor Annotation Release 100, and Functional annotations of NCBI Varroa destructor Annotation Release 100. The assembly and annotations have updated to the most recent assembly, Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2) (https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002443255.2//), NCBI Varroa destructor Annotation Release 100 (https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Varroa_destructor/100/), and Functional annotations of NCBI Varroa destructor Annotation Release 100 (https://i5k.nal.usda.gov/data/Arthropoda/vardes-%28Varroa_destructor%29/Vdes_3.0/2.Official%20or%20Primary%20Gene%20Set//).Genomic and transcriptomic data from V. destructor and its sister species Varroa jacobsoni, which also recently switched hosts, will allow for a comparative approach to understanding the mechanisms underlying host switches and enable population genomics studies aiming to reconstruct global demographic history and dispersal of V. destructor.