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Varroa destructor

    Summary
    Type
    organism
    Genus
    Varroa
    Species
    destructor
    Common Name
    Honeybee mite
    Description

    The ectoparasitic mite Varroa destructor, of the mite order Mesostigmata, originated in Asia as a pest of the Asian honey bee (Apis cerana).  However, subsequent to making a host switch and becoming a primary parasite of the domesticated Western honey bee (Apis mellifera), it has successfully spread almost worldwide and is considered the most damaging pest to beekeeping.  V. destructor is an obligate parasite of immature and adult bees, and is a confirmed vector of viral pathogens important for bee health.
    Genomic and transcriptomic data from V. destructor and its sister species Varroa jacobsoni, which also recently switched hosts, will allow for a comparative approach to understanding the mechanisms underlying host switches and enable population genomics studies aiming to reconstruct global demographic history and dispersal of V. destructor.

    Genome update. Previously, the i5k Workspace@NAL hosted Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2), NCBI Varroa destructor Annotation Release 100, and Functional annotations of NCBI Varroa destructor Annotation Release 100. The assembly and annotations have updated to the most recent assembly, Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2) (https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_002443255.2//(link is external)), NCBI Varroa destructor Annotation Release 100 (https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Varroa_destructor/100/(link is external)), and Functional annotations of NCBI Varroa destructor Annotation Release 100 (https://i5k.nal.usda.gov/data/Arthropoda/vardes-%28Varroa_destructor%29/Vdes_3.0/2.Official%20or%20Primary%20Gene%20Set//).
    Publication
    Techer MA, Rane RV, Grau ML, Roberts JMK, Sullivan ST, Liachko I, Childers AK, Evans JD, Mikheyev AS. Divergent evolutionary trajectories following speciation in two ectoparasitic honey bee mites. . Communications biology. 2019; 2:357.
    Organism Image
    Image Credit
    Maeva Techer, CC BY-NC-SA 4.0
    Assembly Stats
    Contig N50
    NA
    GC Content
    35.82
    Scaffold N50
    58,536,683
    Other Information
    Community Contact
    Maeva Techer, Texas A&M University; Jay Evans, USDA-ARS
    Analyses
    Name Program
    NCBI Varroa destructor Annotation Release 100 NCBI Eukaryotic annotation pipeline
    Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.1) Newbler v. 2.6; pbjelly v. 15.8.24
    Functional annotation of NCBI Varroa destructor Annotation Release 100 AgBase functional annotation pipeline
    Varroa destructor genome assembly Vdes_3.0 (GCF_002443255.2) Newbler v. 2.6; pbjelly v. 15.8.24