An official website of the United States government.

The .gov means it’s official.
Federal government websites always use a .gov or .mil domain. Before sharing sensitive information online, make sure you’re on a .gov or .mil site by inspecting your browser’s address (or “location”) bar.

This site is also protected by an SSL (Secure Sockets Layer) certificate that’s been signed by the U.S. government. The https:// means all transmitted data is encrypted — in other words, any information or browsing history that you provide is transmitted securely.

i5k Workspace@NAL
U.S. Department of Agriculture

Gerris buenoi annotations OGSv1.1

Summary
Summary
Resource Type
Genome Annotation
Name
Gerris buenoi annotations OGSv1.1
Program, Pipeline, Workflow or Method Name
remap-gff3
Program Version
NA
Data Source
Source Name
: Gerris buenoi annotations OGSv1.0
Source URI
: https://i5k.nal.usda.gov/data/Arthropoda/gerbue-%28Gerris_buenoi%29/Gbue_2.0/2.Official%20or%20Primary%20Gene%20Set/
Organism
G. buenoi (Water strider)
Publication
Armisén D, Rajakumar R, Friedrich M, Benoit JB, Robertson HM, Panfilio KA, Ahn SJ, Poelchau MF, Chao H, Dinh H, Doddapaneni HV, Dugan S, Gibbs RA, Hughes DST, Han Y, Lee SL, Murali SC, Muzny DM, Qu J, Worley KC, Munoz-Torres M, Abouheif E, Bonneton F, Chen T, Chiang LM, Childers CP, Cridge AG, Crumière AJJ, Decaras A, Didion EM, Duncan EJ, Elpidina EN, Favé MJ, Finet C, Jacobs CGC, Cheatle Jarvela AM, Jennings EC, Jones JW, Lesoway MP, Lovegrove MR, Martynov A, Oppert B, Lillico-Ouachour A, Rajakumar A, Refki PN, Rosendale AJ, Santos ME, Toubiana W, van der Zee M, Vargas Jentzsch IM, Lowman AV, Viala S, Richards S, Khila A. The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water.. BMC genomics. 2018 Nov 21; 19(1):832.
Description

Gerris buenoi annotations OGSv1.0 were generated by merging automatic gene predictions from Maker (performed by Dan Hughes at Baylor College of Medicine) with manual annotations by the research community (done via the Apollo manual annotation software). More information about OGSv1.0 can be found here: https://data.nal.usda.gov/dataset/gerris-buenoi-official-gene-set-v10. OGSv1.0 was moved to genome assembly GCA_001010745.2 using the coordinates_conversion and remap-gff3 programs, resulting in OGSv1.1.