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U.S. Department of Agriculture

Oncopeltus fasciatus Official Gene Set v1.1

Summary
Summary
Resource Type
Genome Annotation
Name
Oncopeltus fasciatus Official Gene Set v1.1
Program, Pipeline, Workflow or Method Name
BCM created initial set; Panfilio refined and released final OGS
Program Version
n/a
Data Source
Source Name
: Oncopeltus fasciatus Official Gene set v1.1
Source URI
: https://doi.org/10.15482/USDA.ADC/1173142
Organism
O. fasciatus (Milkweed bug)
Publication
Panfilio KA, Vargas Jentzsch IM, Benoit JB, Erezyilmaz D, Suzuki Y, Colella S, Robertson HM, Poelchau MF, Waterhouse RM, Ioannidis P, Weirauch MT, Hughes DST, Murali SC, Werren JH, Jacobs CGC, Duncan EJ, Armisén D, Vreede BMI, Baa-Puyoulet P, Berger CS, Chang CC, Chao H, Chen MM, Chen YT, Childers CP, Chipman AD, Cridge AG, Crumière AJJ, Dearden PK, Didion EM, Dinh H, Doddapaneni HV, Dolan A, Dugan S, Extavour CG, Febvay G, Friedrich M, Ginzburg N, Han Y, Heger P, Holmes CJ, Horn T, Hsiao YM, Jennings EC, Johnston JS, Jones TE, Jones JW, Khila A, Koelzer S, Kovacova V, Leask M, Lee SL, Lee CY, Lovegrove MR, Lu HL, Lu Y, Moore PJ, Munoz-Torres MC, Muzny DM, Palli SR, Parisot N, Pick L, Porter ML, Qu J, Refki PN, Richter R, Rivera-Pomar R, Rosendale AJ, Roth S, Sachs L, Santos ME, Seibert J, Sghaier E, Shukla JN, Stancliffe RJ, Tidswell O, Traverso L, van der Zee M, Viala S, Worley KC, Zdobnov EM, Gibbs RA, Richards S. Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome.. Genome biology. 2019 04 02; 20(1):64.
Description

This official gene set was created by the Baylor College of Medicine, using their custom workflow. The resulting set of files was post processed by the Panfilio lab to incorporate additional information and corrections.

Please cite https://doi.org/10.15482/USDA.ADC/1173142.
Algorithm
BCM OGS workflow