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Fopius arisanus

    Summary
    Type
    organism
    Genus
    Fopius
    Species
    arisanus
    Description

    Fopius arisanus (Sonan, 1932) is an egg-pupal parasitoid of Tephritid fruit flies. This Braconid wasp has been utilized for biological control of the Mediterranean fruit fly (Ceratitis capitata), oriental fruit fly (Bactrocera dorsalis), as well as many other Tephritid species, which are economic pests world-wide. F. arisanus lays its eggs into the egg of the host fly, and develop during egg and larvae stages to emerge from pupa of the host as an adult wasp. Foundational genomic and transcriptomic information in this species serve as a tool to help in understanding the underlying mechanisms that contribute to parasitism behavior, describing the physiology and biology of host selection and host/parasitoid interactions, the design of better biological control strategies, and the development of monitoring tools for parasitism rate in the field. In addition, to our knowledge, this is the first member of the Opiinae to have significant molecular data collected from it, which includes many important parasitoids used for biological control (e.g. Diachasmimorpha sp. and Psyttalia sp.) and can be used in comparative genomics with other sequenced hymenopterans. Like other hymenopterans, this species is haplodiploid, with females being diploid and males haploid. To generate this assembly, we pooled haploid males from a single unmated female to reduce heterozygosity of the assembly, essentially representing the genome of the parental female.

    Image author and copyright: Amy Carmichael, Queensland University of Technology, Image source(link is external) (Creative Commons Attribution 3.0 Australia License)(link is external)
    Publication
    Geib SM, Liang GH, Murphy TD, Sim SB. Whole Genome Sequencing of the Braconid Parasitoid Wasp Fopius arisanus, an Important Biocontrol Agent of Pest Tepritid Fruit Flies. . G3 (Bethesda, Md.). 2017 08 07; 7(8):2407-2411.
    Organism Image
    Assembly Stats
    Contig N50
    NA
    GC Content
    39.44
    Scaffold N50
    978588
    Other Information
    Community Contact
    Scott Geib, USDA-ARS
    Analyses
    Name Program
    NCBI Fopius arisanus Annotation Release 100 NCBI Eukaryotic Genome Annotation Pipeline
    Fopius arisanus genome assembly Fari_v1 AllPaths
    Functional annotation of NCBI Fopius arisanus Annotation Release 100 AgBase functional annotation pipeline