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Clitarchus hookeri
Summary
| Type |
organism
|
|---|---|
| Genus |
Clitarchus
|
| Species |
hookeri
|
| Common Name |
Smooth stick insect
|
| Genome Browser | |
| Description | |
| Publication |
Wu C, Twort VG, Crowhurst RN, Newcomb RD, Buckley TR. Assembling large genomes: analysis of the stick insect (Clitarchus hookeri) genome reveals a high repeat content and sex-biased genes associated with reproduction. . BMC genomics. 2017 Nov 16; 18(1):884.
|
| Organism Image |
|
| Image Credit |
Photo by Phil Bendle is licensed under a Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 New Zealand License
|
Assembly Stats
| Contig N50 |
NA
|
|---|---|
| GC Content |
39.38
|
| Scaffold N50 |
316087
|
Other Information
| Community Contact |
Chen Wu, The New Zealand Institute for Plant & Food Research Ltd.; Thomas Buckley, Landcare Research Ltd
|
|---|---|
| Links |
Analyses
| Name | Program |
|---|---|
| Clitarchus hookeri genome assembly ASM277835v1 (GCA_002778355.1) | SOAPdenovo2 |
| Clitarchus hookeri annotations Clitarchus_hookeri_annotation | MAKER2 |
| Ovariolar tips cufflinks analysis | Cufflinks |
| Ovary and Testis Cufflinks analysis | Cufflinks |
| Functional annotation of Clitarchus hookeri | AgBase functional annotation pipeline |
Assembling large genomes: analysis of the stick insect (Clitarchus hookeri) genome reveals a highly repetitive genome and sex-biased genes associated with reproduction.