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i5k Workspace@NAL
U.S. Department of Agriculture
  1. Organism
  2. Schistocerca Serialis Cubense

Schistocerca serialis cubense

Summary
Type
organism
Genus
Schistocerca
Species
serialis cubense
Description

This genome project is a joint effort between the Behavioral Plasticity Research Institute (https://behavioralplasticity.org(link is external)) and the Ag100Pest project (http://i5k.github.io/ag100pest(link is external)).

This dataset is not published - please follow Toronto/Ft. Lauderdale conditions of data re-use.
Publication
Childers AK, Geib SM, Sim SB, Poelchau MF, Coates BS, Simmonds TJ, Scully ED, Smith TPL, Childers CP, Corpuz RL, Hackett K, Scheffler B. The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research. . Insects. 2021 Jul 09; 12(7).
Organism Image
Image Credit
Schistocerca_serialis_cubense.jpg by Brandon Woo
Assembly Stats
GC Content
52.53
Scaffold N50
849285246
Other Information
Community Contact
Hojun Song, Texas A&M Universityy; Anna Childers, USDA-ARS; Olga Dudchenko, Baylor College of Medicine
Links
NCBI BioProject
DNA Zoo(link is external)
Behavioral Plasticity Research Institute(link is external)
Ag100Pest(link is external)
Download data
Analyses
Name Program
NCBI Schistocerca serialis cubense Annotation Release 100 NCBI Eukaryotic Genome Annotation Pipeline
Schistocerca serialis cubense genome assembly iqSchSeri2.2 (GCF_023864345.2) HiFiASM v. 0.15.4; 3D-DNA v. 210817; Juicebox Assembly Tools v. 1.11
Functional annotation of NCBI Schistocerca serialis cubense Annotation Release 100 AgBase functional annotation pipeline