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Centruroides sculpturatus
Summary
| Type |
organism
|
|---|---|
| Genus |
Centruroides
|
| Species |
sculpturatus
|
| Common Name |
Bark scorpion
|
| Description | |
| Publication |
Schwager EE, Sharma PP, Clarke T, Leite DJ, Wierschin T, Pechmann M, Akiyama-Oda Y, Esposito L, Bechsgaard J, Bilde T, Buffry AD, Chao H, Dinh H, Doddapaneni H, Dugan S, Eibner C, Extavour CG, Funch P, Garb J, Gonzalez LB, Gonzalez VL, Griffiths-Jones S, Han Y, Hayashi C, Hilbrant M, Hughes DST, Janssen R, Lee SL, Maeso I, Murali SC, Muzny DM, Nunes da Fonseca R, Paese CLB, Qu J, Ronshaugen M, Schomburg C, Schönauer A, Stollewerk A, Torres-Oliva M, Turetzek N, Vanthournout B, Werren JH, Wolff C, Worley KC, Bucher G, Gibbs RA, Coddington J, Oda H, Stanke M, Ayoub NA, Prpic NM, Flot JF, Posnien N, Richards S, McGregor AP. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution. . BMC biology. 2017 07 31; 15(1):62.
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| Organism Image |
|
| Image Credit |
Assembly Stats
| Contig N50 |
5173
|
|---|---|
| GC Content |
30.59
|
| Scaffold N50 |
342549
|
Other Information
| Community Contact |
Prashant Sharma, University of Wisconsin
|
|---|---|
| Links |
Analyses
| Name | Program |
|---|---|
| Whole genome assembly of Centruroides sculpturatus | Baylor College of Medicine genome assembly pipeline |
| Annotation v0.5.3 of the Centruroides sculpturatus assembly using MAKER (Baylor College of Medicine) | MAKER |
| Functional annotation of Centruroides sculpturatus BCM version 0.5.3 | AgBase functional annotation pipeline |
| NCBI Centruroides sculpturatus Annotation Release 100 | NCBI Eukaryotic Genome Annotation Pipeline |
| Centruroides sculpturatus genome assembly Cexi_2.0 (GCF_000671375.1) | AllPaths v. 35218; ATLAS-link v. 1.0; ATLAS-gapfill v. 2.2; redundans v. 0.12c |
| Functional annotation of NCBI Centruroides sculpturatus Annotation Release 100 | AgBase functional annotation pipeline |
Provides appropriate phylogenetic sampling across diversity of class Arachnida.
Data were generated by the Baylor College of Medicine's i5k pilot project.
Genome update. Previously, the i5k Workspace@NAL hosted Cscul.scaffolds.50.fa.gz, BCM version 0.5.3 and Funtional annotation of BCM veriosn 0.5.3. The assembly and annotations have updated to the most recent assembly, Centruroides sculpturatus genome assembly Cexi_2.0 (GCF_000671375.1) (https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_000671375.1/), NCBI Centruroides sculpturatus Annotation Release 100 (https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Centruroides_sculpturatus/100/), and Functional annotations of NCBI Centruroides sculpturatusa Annotation Release 100 (https://i5k.nal.usda.gov/data/Arthropoda/censcu-%28Centruroides_sculpturatus%29/Cexi_2.0/2.Official%20or%20Primary%20Gene%20Set/).