Functional annotation of BCM annotation of the Eurytemora affinis assembly using Maker and additional analyses
Resource Type | Gene Functional Annotation |
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Name | Functional annotation of BCM annotation of the Eurytemora affinis assembly using Maker and additional analyses |
Description | The AgBase functional annotation pipeline provides Gene Ontology annotations via the GOAnna and InterProScan software packages, as well as KEGG annotations via the KOBAS software, for protein sets hosted by the i5k Workspace@NAL. A full description of the functional annotation pipeline can be found here: https://www.mdpi.com/2075-4450/12/8/748 Instructions for running the functional annotation pipeline can be found here: https://agbase-docs.readthedocs.io/en/latest/agbase/workflow.html Functional annotation files are available under https://i5k.nal.usda.gov/content/data-downloads |
Program, Pipeline, Workflow or Method Name | AgBase functional annotation pipeline |
Program Version | n/a |
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Publication | Saha S, Cooksey AM, Childers AK, Poelchau MF, McCarthy FM. Workflows for Rapid Functional Annotation of Diverse Arthropod Genomes.. Insects. 2021 Aug 19; 12(8). |
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Date Performed | Wednesday, September 30, 2020 - 14:59 |