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U.S. Department of Agriculture

Helicoverpa zea genome assembly ilHelZeax1 (GCF_022581195.2)

Summary
Summary
Resource Type
Genome Assembly
Name
Helicoverpa zea genome assembly ilHelZeax1 (GCF_022581195.2)
Program, Pipeline, Workflow or Method Name
FALCON v. 1.8.1; FALCON-Unzip v. 1.3.7; purge_dups v. 1.2.5; bwa-mem v. 2.2.1; Juicebox v. 1.11.08; Arrow gcpp v. 2.0.2; FreeBayes v. 1.0.2; Merqury v. 1.1
Program Version
NA
Data Source
Source Name
: BioSample: SAMN25818888
Source URI
: https://www.ncbi.nlm.nih.gov/biosample/SAMN25818888/
Organism
H. zea (corn earworm)
Publication
  1. Stahlke AR, Chang J, Tembrock LR, Sim SB, Chudalayandi S, Geib SM, Scheffler BE, Perera OP, Gilligan TM, Childers AK, Hackett KJ, Coates BS. A chromosome-scale genome assembly of a Helicoverpa zea strain resistant to Bacillus thuringiensis Cry1Ac insecticidal protein.. Genome biology and evolution. 2022 Aug 12.
  2. Childers AK, Geib SM, Sim SB, Poelchau MF, Coates BS, Simmonds TJ, Scully ED, Smith TPL, Childers CP, Corpuz RL, Hackett K, Scheffler B. The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research.. Insects. 2021 Jul 09; 12(7).
Cross Reference
NCBI Assembly