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i5k Workspace@NAL
U.S. Department of Agriculture
  1. Genefunctionalannotation
  2. Functional Annotation of NCBI Schistocerca Piceifrons Annotation Release 100

Functional annotation of NCBI Schistocerca piceifrons Annotation Release 100

Summary
Type
Gene functional annotation
Name
Functional annotation of NCBI Schistocerca piceifrons Annotation Release 100
Description

The AgBase functional annotation pipeline provides Gene Ontology annotations via the GOAnna and InterProScan software packages, as well as KEGG annotations via the KOBAS software, for protein sets hosted by the i5k Workspace@NAL.

A full description of the functional annotation pipeline can be found here: https://www.mdpi.com/2075-4450/12/8/748(link is external)

Instructions for running the functional annotation pipeline can be found here: https://agbase-docs.readthedocs.io/en/latest/agbase/workflow.html(link is external)

Functional annotation files are available under https://i5k.nal.usda.gov/content/data-downloads
Program, Pipeline, Workflow or Method Name
AgBase functional annotation pipeline
Program Version
NA
Data Source Name
GCF_021461385.2_iqSchPice1.1_protein.faa
Data Source URI
https://i5k.nal.usda.gov/sites/default/files/data/Arthropoda/schpic-%28Schistocerca_piceifrons%29/iqSchPice1.1/2.Official%20or%20Primary%20Gene%20Set/
Organism
Schistocerca piceifrons