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i5k Workspace@NAL
U.S. Department of Agriculture

Nylanderia fulva

Summary
Analysis
Assembly Stats
Other Information
Summary
Resource Type
Organism
Genus
Nylanderia
Species
fulva
Common Name
Tawny crazy ant
Description

The genome of the tawny crazy ant, Nylanderia fulva, was sequenced to provide a resource for targeting genes using RNAi approaches for controlling this invasive pest ant, and for providing genomic resources to the community of researchers studying ants. Genomic DNA was extracted from pooled whole bodies of individual worker ants from a single colony from Texas City, Texas, U.S.A.

This dataset is not published - please follow Toronto/Ft. Lauderdale conditions of data re-use.

Genome update. Previously, the i5k Workspace@NAL hosted Nylanderia fulva genome assembly TAMU_Nfulva_1.0 (GCF_005281655.1), NCBI Nylanderia fulva Annotation Release 100, and Functional annotations of NCBI Nylanderia fulva Annotation Release 100. The assembly and annotations have updated to the most recent assembly, Nylanderia fulva genome assembly TAMU_Nfulva_1.1 (GCF_005281655.2)(https://www.ncbi.nlm.nih.gov/datasets/genome/GCF_005281655.2//), NCBI Nylanderia fulva Annotation Release 100 (https://www.ncbi.nlm.nih.gov/genome/annotation_euk/Nylanderia_fulva/100/), and Functional annotations of NCBI Nylanderia fulva Annotation Release 100 (https://i5k.nal.usda.gov/data/Arthropoda/nylful-%28Nylanderia_fulva%29/TAMU_Nfulva_1.1/3.Additional%20Gene%20Sets%20and%20Annotation%20Projects/).
Organism Image
Nylanderia fulva
Image Credit
Tawny crazy ants, Nylanderia fulva, queen and worker by Alex Wild and Ed LeBrun is a public domain image.
Analysis
NameProgramDate Constructed
Nylanderia fulva genome assembly TAMU_Nfulva_1.0 (GCF_005281655.1)CANU, SSPACEMay 13th, 2019
NCBI Nylanderia fulva Annotation Release 100NCBI Eukaryotic Genome Annotation PipelineMay 14th, 2019
Nylanderia fulva annotations OGSv1.0NCBI Eukaryotic Genome Annotation Pipeline (8.2); GeMoMa; exonerate; BLAST; EvidenceModeler; GFF3toolkit (v1.4.4)Aug 6th, 2019
Functional annotation of NCBI Nylanderia fulva Annotation Release 100AgBase functional annotation pipelineApr 22nd, 2022
Nylanderia fulva genome assembly TAMU_Nfulva_1.1 (GCF_005281655.2)CANU v. 1.7; SSPACE v. 3May 13th, 2019
Nylanderia fulva annotations OGSv1.1NCBI Eukaryotic Genome Annotation Pipeline (8.2); GeMoMa; exonerate; BLAST; EvidenceModeler; GFF3toolkit (v1.4.4)Oct 17th, 2023
Assembly Stats
Contig N50
320712
Scaffold N50
443094
GC Content
35.53
Other Information
Community Contact
Ed Vargo, Texas A&M University
Links
NCBI BioSample