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i5k Workspace@NAL
U.S. Department of Agriculture

Eufriesea mexicana Official Gene Set v1.1

Summary
Summary
Resource Type
Genome Annotation
Name
Eufriesea mexicana Official Gene Set v1.1
Program, Pipeline, Workflow or Method Name
Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN
Program Version
NA
Data Source
Source Name
: Eufriesea mexicana genome assembly ASM148370v1 (GCF_001483705.1)
Source URI
: https://i5k.nal.usda.gov/sites/default/files/data/Arthropoda/eufmex-%28Eufriesea_mexicana%29/ASM148370v1/2.Official%20or%20Primary%20Gene%20Set/Eufriesea_mexicana_Official_Gene_set_v1.1/
Organism
E. mexicana (NA)
Publication
Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus FB, Helbing S, Moritz RF, Glastad KM, Hunt BG, Goodisman MA, Hauser F, Grimmelikhuijzen CJ, Pinheiro DG, Nunes FM, Soares MP, Tanaka ÉD, Simões ZL, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston JS, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang G. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.. Science (New York, N.Y.). 2015 Jun 05; 348(6239):1139-43.
Description

The Eufriesea mexicana Official Gene Set v1.1 was generated by the authors of the publication associated with this record, in collaboration with the Hymenoptera Genome Database (https://hymenoptera.elsiklab.missouri.edu/). Details on how the annotations were generated are available from the publication. Briefly, the authors used homology based methods and de novo methods; and the results of both methods were integrated by GLEAN. The i5k Workspace@NAL is co-hosting the data with the Hymenoptera Genome Database. Files at the i5k Workspace@NAL were retrieved from BeeBase on 08/30/2018.