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i5k Workspace@NAL
U.S. Department of Agriculture

Blattella germanica annotations OGSv1.2

Summary
Summary
Resource Type
Genome Annotation
Name
Blattella germanica annotations OGSv1.2
Program, Pipeline, Workflow or Method Name
remap-gff3
Program Version
NA
Data Source
Source Name
: Blattella germanica annotations OGSv1.0
Source URI
: https://i5k.nal.usda.gov/data/Arthropoda/blager-%28Blattella_germanica%29/Bger_2.0/2.Official%20or%20Primary%20Gene%20Set/
Organism
B. germanica (German cockroach)
Publication
Harrison MC, Jongepier E, Robertson HM, Arning N, Bitard-Feildel T, Chao H, Childers CP, Dinh H, Doddapaneni H, Dugan S, Gowin J, Greiner C, Han Y, Hu H, Hughes DST, Huylmans AK, Kemena C, Kremer LPM, Lee SL, Lopez-Ezquerra A, Mallet L, Monroy-Kuhn JM, Moser A, Murali SC, Muzny DM, Otani S, Piulachs MD, Poelchau M, Qu J, Schaub F, Wada-Katsumata A, Worley KC, Xie Q, Ylla G, Poulsen M, Gibbs RA, Schal C, Richards S, Belles X, Korb J, Bornberg-Bauer E. Hemimetabolous genomes reveal molecular basis of termite eusociality.. Nature ecology & evolution. 2018 03; 2(3):557-566.
Description

OGS v1.0 was mapped to genome assembly Bger2.0 (https://www.ncbi.nlm.nih.gov/assembly/GCA_000762945.2) using https://github.com/NAL-i5K/coordinates_conversion and subsequently https://github.com/NAL-i5K/remap-gff3, resulting in OGSv1.2