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i5k Workspace@NAL
U.S. Department of Agriculture

Bombus impatiens annotations bimp_OGSv1.1

Summary
Summary
Resource Type
Genome Annotation
Name
Bombus impatiens annotations bimp_OGSv1.1
Program, Pipeline, Workflow or Method Name
Augustus, GlimmerHMM, SNAP, TBLASTN, GLEAN
Program Version
NA
Data Source
Source Name
: Bombus impatiens genome assembly BIMP_2.1 (GCF_000188095.2)
Source URI
: https://i5k.nal.usda.gov/data/Arthropoda/bomimp-%28Bombus_impatiens%29/BIMP_2.1/
Organism
B. impatiens (Common eastern bumble bee)
Publication
Kapheim KM, Pan H, Li C, Salzberg SL, Puiu D, Magoc T, Robertson HM, Hudson ME, Venkat A, Fischman BJ, Hernandez A, Yandell M, Ence D, Holt C, Yocum GD, Kemp WP, Bosch J, Waterhouse RM, Zdobnov EM, Stolle E, Kraus FB, Helbing S, Moritz RF, Glastad KM, Hunt BG, Goodisman MA, Hauser F, Grimmelikhuijzen CJ, Pinheiro DG, Nunes FM, Soares MP, Tanaka ÉD, Simões ZL, Hartfelder K, Evans JD, Barribeau SM, Johnson RM, Massey JH, Southey BR, Hasselmann M, Hamacher D, Biewer M, Kent CF, Zayed A, Blatti C, Sinha S, Johnston JS, Hanrahan SJ, Kocher SD, Wang J, Robinson GE, Zhang G. Social evolution. Genomic signatures of evolutionary transitions from solitary to group living.. Science (New York, N.Y.). 2015 Jun 05; 348(6239):1139-43.
Description

Details of the annotations are available from the following publication:
Social evolution. Genomic signatures of evolutionary transitions from solitary to group living. Science. 2015 Jun 5;348(6239):1139-43. doi: 10.1126/science.aaa4788. Epub 2015 May 14.

Bombus impatiens annotations bimp_OGSv1.1 are derived from Bombus terrestris annotations bimp_OGSv1.0 (http://hymenopteragenome.org/beebase/?q=consortium_datasets). bimp_OGSv1.0 was updated to genome coordinates from assembly GCF_000188095.2.