Clitarchus hookeri

Overview

Assembling large genomes: analysis of the stick insect (Clitarchus hookeri) genome reveals a highly repetitive genome and sex-biased genes associated with reproduction.

Please cite the following publication when using this dataset: BMC Genomics. 2017 Nov 16;18(1):884. doi: 10.1186/s12864-017-4245-x.

Community contact:

Feature Summary
The following features are currently present for this organism
Feature TypeCount
There are no feature counts to report. If you have loaded features for this organism then re-populate the organism_feature_count materialized view.
Organism Image
Contig N50
NA
Scaffold N50
316087
Community Contact
Community Contact: 
Chen Wu|chen.wu@plantandfood.co.nz
Image Credit
Photo by Phil Bendle is licensed under a <a href="https://creativecommons.org/licenses/by-nc-nd/3.0/nz/">Creative Commons Attribution-Noncommercial-No Derivative Works 3.0 New Zealand License</a>

Assembly Information

Analysis Name Clitarchus hookeri genome assembly ASM277835v1 (GCA_002778355.1)
Software SOAPdenovo2 (vR223)
Source SAMN07418408
Date performed 2017-11-16
Materials & Methods BMC Genomics. 2017 Nov 16;18(1):884. doi: 10.1186/s12864-017-4245-x

Statistics

Assembly Metrics
Contig N50 NA
Scaffold N50 316087
GC Content 39.38